6-32942264-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942264
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942264
    reference: chr 6
allele count: 135
allele frequency: 1.116459087976976e-3
allele num: 120918
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.-87T>C
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.72T>C
  hgvsp: ENST00000449025.1:c.72T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.55T>C
  hgvsp: ENST00000495733.1:c.55T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.55T>C
  hgvsp: ENST00000374825.4:c.55T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.55T>C
  hgvsp: ENST00000482914.1:c.55T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.55T>C
  hgvsp: ENST00000374831.4:c.55T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.55T>C
  hgvsp: ENST00000395289.2:c.55T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-398T>C
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.55T>C
  hgvsp: ENST00000395287.1:c.55T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.60T>C
  hgvsp: ENST00000456339.1:c.60T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.55T>C
  hgvsp: ENST00000607833.1:c.55T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2074
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1836
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2847
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1541
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6676
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6008
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1313
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31578
  bin: 9.75e1
  variant carriers: 117
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Leu19Leu
num of homozygotes: 1
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: QD
site quality: MQRankSum

6-32942277-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942277
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942277
    reference: chr 6
allele count: 705
allele frequency: 5.817215657799195e-3
allele num: 121192
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.-74G>A
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.68G>A
  hgvsp: ENSP00000475691.1:p.Gly23Asp
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.68G>A
  hgvsp: ENSP00000363958.4:p.Gly23Asp
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.68G>A
  hgvsp: ENSP00000378702.1:p.Gly23Asp
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.73G>A
  hgvsp: ENSP00000411195.1:p.Gly25Asp
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-385G>A
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.68G>A
  hgvsp: ENSP00000431514.1:p.Gly23Asp
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.68G>A
  hgvsp: ENSP00000363964.4:p.Gly23Asp
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.68G>A
  hgvsp: ENSP00000378704.2:p.Gly23Asp
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.68G>A
  hgvsp: ENSP00000436322.1:p.Gly23Asp
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.85G>A
  hgvsp: ENSP00000409613.1:p.Gly29Asp
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2927
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6829
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 5.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 2054
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 6003
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31635
  bin: 9.75e1
  variant carriers: 602
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 4.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 5.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 4.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 6.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 7.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 7.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1523
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 8.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
hgvs: p.Gly23Asp
num of homozygotes: 2
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum

6-32942278-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942278
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942278
    reference: chr 6
allele count: 1
allele frequency: 8.251369727374745e-6
allele num: 121192
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.69C>T
  hgvsp: ENST00000374825.4:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-384C>T
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.69C>T
  hgvsp: ENST00000482914.1:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.69C>T
  hgvsp: ENST00000607833.1:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.69C>T
  hgvsp: ENST00000395287.1:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.69C>T
  hgvsp: ENST00000395289.2:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.74C>T
  hgvsp: ENST00000456339.1:c.74C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.86C>T
  hgvsp: ENST00000449025.1:c.86C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.69C>T
  hgvsp: ENST00000374831.4:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.69C>T
  hgvsp: ENST00000495733.1:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.-73C>T
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31591
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2060
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5979
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2940
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6843
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1826
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1535
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly23Gly
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: African
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

6-32942280-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942280
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942280
    reference: chr 6
allele count: 1
allele frequency: 8.249599894405122e-6
allele num: 121218
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.76C>T
  hgvsp: ENSP00000411195.1:p.Pro26Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.88C>T
  hgvsp: ENSP00000409613.1:p.Pro30Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.71C>T
  hgvsp: ENSP00000436322.1:p.Pro24Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.-71C>T
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.71C>T
  hgvsp: ENSP00000378702.1:p.Pro24Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.71C>T
  hgvsp: ENSP00000378704.2:p.Pro24Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.71C>T
  hgvsp: ENSP00000363958.4:p.Pro24Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.71C>T
  hgvsp: ENSP00000475691.1:p.Pro24Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.71C>T
  hgvsp: ENSP00000363964.4:p.Pro24Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-382C>T
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.71C>T
  hgvsp: ENSP00000431514.1:p.Pro24Leu
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2949
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31591
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1535
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6853
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5964
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2060
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro24Leu
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD

6-32942282-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942282
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942282
    reference: chr 6
allele count: 2
allele frequency: 1.649647800194658e-5
allele num: 121238
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.-69G>A
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.73G>A
  hgvsp: ENSP00000475691.1:p.Glu25Lys
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.73G>A
  hgvsp: ENSP00000431514.1:p.Glu25Lys
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-380G>A
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.73G>A
  hgvsp: ENSP00000363958.4:p.Glu25Lys
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.73G>A
  hgvsp: ENSP00000378704.2:p.Glu25Lys
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.73G>A
  hgvsp: ENSP00000436322.1:p.Glu25Lys
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.73G>A
  hgvsp: ENSP00000363964.4:p.Glu25Lys
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.73G>A
  hgvsp: ENSP00000378702.1:p.Glu25Lys
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.90G>A
  hgvsp: ENSP00000409613.1:p.Glu31Lys
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.78G>A
  hgvsp: ENSP00000411195.1:p.Glu27Lys
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31590
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2957
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2060
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5965
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1826
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu25Lys
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: South Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

6-32942284-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942284
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942284
    reference: chr 6
allele count: 1
allele frequency: 8.246606521416436e-6
allele num: 121262
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.75A>G
  hgvsp: ENST00000374825.4:c.75A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.75A>G
  hgvsp: ENST00000482914.1:c.75A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.75A>G
  hgvsp: ENST00000607833.1:c.75A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.75A>G
  hgvsp: ENST00000395289.2:c.75A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.92A>G
  hgvsp: ENST00000449025.1:c.92A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.75A>G
  hgvsp: ENST00000395287.1:c.75A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.80A>G
  hgvsp: ENST00000456339.1:c.80A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.75A>G
  hgvsp: ENST00000374831.4:c.75A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-378A>G
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.-67A>G
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.75A>G
  hgvsp: ENST00000495733.1:c.75A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2060
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1535
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6863
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31590
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2957
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5976
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu25Glu
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum

6-32942290-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942290
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942290
    reference: chr 6
allele count: 1
allele frequency: 8.243751236562685e-6
allele num: 121304
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-372A>G
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.81A>G
  hgvsp: ENST00000395289.2:c.81A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.81A>G
  hgvsp: ENST00000374831.4:c.81A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.86A>G
  hgvsp: ENST00000456339.1:c.86A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.81A>G
  hgvsp: ENST00000395287.1:c.81A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.81A>G
  hgvsp: ENST00000495733.1:c.81A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.-61A>G
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.81A>G
  hgvsp: ENST00000607833.1:c.81A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.98A>G
  hgvsp: ENST00000449025.1:c.98A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.81A>G
  hgvsp: ENST00000374825.4:c.81A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.81A>G
  hgvsp: ENST00000482914.1:c.81A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1535
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5949
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31590
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1826
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2982
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6882
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala27Ala
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum

6-32942299-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942299
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942299
    reference: chr 6
allele count: 1
allele frequency: 8.239404126293587e-6
allele num: 121368
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.90G>A
  hgvsp: ENST00000374831.4:c.90G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.95G>A
  hgvsp: ENST00000456339.1:c.95G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.90G>A
  hgvsp: ENST00000374825.4:c.90G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-363G>A
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.90G>A
  hgvsp: ENST00000495733.1:c.90G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.90G>A
  hgvsp: ENST00000395289.2:c.90G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.90G>A
  hgvsp: ENST00000607833.1:c.90G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.90G>A
  hgvsp: ENST00000482914.1:c.90G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.90G>A
  hgvsp: ENST00000395287.1:c.90G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.-52G>A
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.107G>A
  hgvsp: ENST00000449025.1:c.107G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5971
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6894
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1535
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31590
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2995
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2060
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly30Gly
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: FS

6-32942302-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942302
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942302
    reference: chr 6
allele count: 71387
allele frequency: 5.881863423637202e-1
allele num: 121368
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.110G>A
  hgvsp: ENST00000449025.1:c.110G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.93G>A
  hgvsp: ENST00000495733.1:c.93G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.93G>A
  hgvsp: ENST00000395289.2:c.93G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.98G>A
  hgvsp: ENST00000456339.1:c.98G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.93G>A
  hgvsp: ENST00000395287.1:c.93G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.93G>A
  hgvsp: ENST00000374825.4:c.93G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.93G>A
  hgvsp: ENST00000482914.1:c.93G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-360G>A
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.93G>A
  hgvsp: ENST00000607833.1:c.93G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.93G>A
  hgvsp: ENST00000374831.4:c.93G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.-49G>A
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 8.25e1
  variant carriers: 1318
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 7.25e1
  variant carriers: 1177
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 4.25e1
  variant carriers: 619
genotype depth: GenotypeDepth
  all individuals: 5266
  bin: 2.75e1
  variant carriers: 182
genotype depth: GenotypeDepth
  all individuals: 2245
  bin: 3.25e1
  variant carriers: 282
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2362
  bin: 2.25e1
  variant carriers: 76
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 4.75e1
  variant carriers: 722
genotype depth: GenotypeDepth
  all individuals: 1551
  bin: 9.25e1
  variant carriers: 1507
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1324
  bin: 7.75e1
  variant carriers: 1257
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 3.75e1
  variant carriers: 444
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 8.75e1
  variant carriers: 1479
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 5.75e1
  variant carriers: 1055
genotype depth: GenotypeDepth
  all individuals: 1173
  bin: 6.25e1
  variant carriers: 1125
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 5.25e1
  variant carriers: 954
genotype depth: GenotypeDepth
  all individuals: 36913
  bin: 9.75e1
  variant carriers: 36651
genotype quality: GenotypeQuality
hgvs: p.Lys31Lys
num of homozygotes: 21342
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: DP

6-32942316-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942316
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942316
    reference: chr 6
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.107C>T
  hgvsp: ENSP00000436322.1:p.Pro36Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.-35C>T
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.112C>T
  hgvsp: ENSP00000411195.1:p.Pro38Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-346C>T
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.107C>T
  hgvsp: ENSP00000378702.1:p.Pro36Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.107C>T
  hgvsp: ENSP00000431514.1:p.Pro36Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.107C>T
  hgvsp: ENSP00000475691.1:p.Pro36Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.107C>T
  hgvsp: ENSP00000378704.2:p.Pro36Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.124C>T
  hgvsp: ENSP00000409613.1:p.Pro42Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.107C>T
  hgvsp: ENSP00000363958.4:p.Pro36Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.107C>T
  hgvsp: ENSP00000363964.4:p.Pro36Leu
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12720
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9927
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2476
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31133
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro36Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: African
population: European (Finnish)
population: Latino
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum

6-32942323-CTT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942323
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942321
    reference: chr 6
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.115_116delTT
  hgvsp: ENSP00000363964.4:p.Leu39ValfsTer2
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.120_121delTT
  hgvsp: ENSP00000411195.1:p.Leu41ValfsTer2
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.115_116delTT
  hgvsp: ENSP00000431514.1:p.Leu39ValfsTer2
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.115_116delTT
  hgvsp: ENSP00000378702.1:p.Leu39ValfsTer2
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-338_-337delTT
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.115_116delTT
  hgvsp: ENSP00000378704.2:p.Leu39ValfsTer2
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.115_116delTT
  hgvsp: ENSP00000475691.1:p.Leu39ValfsTer2
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.-27_-26delTT
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.115_116delTT
  hgvsp: ENSP00000363958.4:p.Leu39ValfsTer2
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.132_133delTT
  hgvsp: ENSP00000409613.1:p.Leu45ValfsTer2
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.115_116delTT
  hgvsp: ENSP00000436322.1:p.Leu39ValfsTer2
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 12724
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2477
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9935
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Leu39ValfsTer2
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: African
reference allele: CTT
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

6-32942328-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942328
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942328
    reference: chr 6
allele count: 2
allele frequency: 1.647337901950448e-5
allele num: 121408
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.136A>G
  hgvsp: ENSP00000409613.1:p.Tyr46Cys
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.119A>G
  hgvsp: ENSP00000436322.1:p.Tyr40Cys
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.119A>G
  hgvsp: ENSP00000378704.2:p.Tyr40Cys
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.119A>G
  hgvsp: ENSP00000475691.1:p.Tyr40Cys
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.119A>G
  hgvsp: ENSP00000363958.4:p.Tyr40Cys
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.119A>G
  hgvsp: ENSP00000431514.1:p.Tyr40Cys
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.119A>G
  hgvsp: ENSP00000363964.4:p.Tyr40Cys
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.124A>G
  hgvsp: ENSP00000411195.1:p.Tyr42Cys
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-334A>G
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.119A>G
  hgvsp: ENSP00000378702.1:p.Tyr40Cys
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.-23A>G
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2477
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31142
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12722
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9941
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Tyr40Cys
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
reference allele: A
site quality: QD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

6-32942329-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942329
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942329
    reference: chr 6
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.120T>C
  hgvsp: ENST00000395287.1:c.120T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.125T>C
  hgvsp: ENST00000456339.1:c.125T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.137T>C
  hgvsp: ENST00000449025.1:c.137T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.-22T>C
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.120T>C
  hgvsp: ENST00000374825.4:c.120T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.120T>C
  hgvsp: ENST00000482914.1:c.120T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.120T>C
  hgvsp: ENST00000395289.2:c.120T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.120T>C
  hgvsp: ENST00000607833.1:c.120T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.120T>C
  hgvsp: ENST00000495733.1:c.120T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-333T>C
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.120T>C
  hgvsp: ENST00000374831.4:c.120T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31137
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9947
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2478
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12721
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr40Tyr
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: T
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum

6-32942330-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942330
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942330
    reference: chr 6
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.126G>A
  hgvsp: ENSP00000411195.1:p.Glu43Lys
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.138G>A
  hgvsp: ENSP00000409613.1:p.Glu47Lys
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.121G>A
  hgvsp: ENSP00000363958.4:p.Glu41Lys
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.121G>A
  hgvsp: ENSP00000475691.1:p.Glu41Lys
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.121G>A
  hgvsp: ENSP00000431514.1:p.Glu41Lys
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.121G>A
  hgvsp: ENSP00000378704.2:p.Glu41Lys
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-332G>A
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.121G>A
  hgvsp: ENSP00000378702.1:p.Glu41Lys
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.-21G>A
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.121G>A
  hgvsp: ENSP00000363964.4:p.Glu41Lys
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.121G>A
  hgvsp: ENSP00000436322.1:p.Glu41Lys
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 9944
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2479
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12722
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31140
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu41Lys
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

6-32942344-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942344
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942344
    reference: chr 6
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.140C>G
  hgvsp: ENSP00000411195.1:p.Ser47Arg
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.152C>G
  hgvsp: ENSP00000409613.1:p.Ser51Arg
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.135C>G
  hgvsp: ENSP00000363964.4:p.Ser45Arg
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-318C>G
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.135C>G
  hgvsp: ENSP00000378704.2:p.Ser45Arg
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.135C>G
  hgvsp: ENSP00000378702.1:p.Ser45Arg
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.135C>G
  hgvsp: ENSP00000431514.1:p.Ser45Arg
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.135C>G
  hgvsp: ENSP00000436322.1:p.Ser45Arg
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.135C>G
  hgvsp: ENSP00000475691.1:p.Ser45Arg
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.-7C>G
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.135C>G
  hgvsp: ENSP00000363958.4:p.Ser45Arg
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12713
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9964
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31142
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2473
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser45Arg
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: Other
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

6-32942354-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942354
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942354
    reference: chr 6
allele count: 2189
allele frequency: 1.803100443155796e-2
allele num: 121402
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.145G>T
  hgvsp: ENSP00000378704.2:p.Ala49Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.4G>T
  hgvsp: ENSP00000409145.2:p.Ala2Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.145G>T
  hgvsp: ENSP00000475691.1:p.Ala49Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.150G>T
  hgvsp: ENSP00000411195.1:p.Ala51Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.145G>T
  hgvsp: ENSP00000378702.1:p.Ala49Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-308G>T
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.145G>T
  hgvsp: ENSP00000431514.1:p.Ala49Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.145G>T
  hgvsp: ENSP00000363958.4:p.Ala49Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.162G>T
  hgvsp: ENSP00000409613.1:p.Ala55Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.145G>T
  hgvsp: ENSP00000363964.4:p.Ala49Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.145G>T
  hgvsp: ENSP00000436322.1:p.Ala49Ser
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12682
  bin: 3.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 2451
  bin: 3.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 92
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 9.75e1
  variant carriers: 924
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.75e1
  variant carriers: 111
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 82
genotype depth: GenotypeDepth
  all individuals: 31109
  bin: 2.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.75e1
  variant carriers: 168
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 4.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 8.75e1
  variant carriers: 159
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 9.25e1
  variant carriers: 136
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.25e1
  variant carriers: 149
genotype depth: GenotypeDepth
  all individuals: 9840
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 5.25e1
  variant carriers: 61
genotype quality: GenotypeQuality
hgvs: p.Ala49Ser
num of homozygotes: 28
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

6-32942355-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942355
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942355
    reference: chr 6
allele count: 2189
allele frequency: 1.803100443155796e-2
allele num: 121402
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.151C>G
  hgvsp: ENSP00000411195.1:p.Ala51Gly
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.146C>G
  hgvsp: ENSP00000363964.4:p.Ala49Gly
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.163C>G
  hgvsp: ENSP00000409613.1:p.Ala55Gly
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.146C>G
  hgvsp: ENSP00000431514.1:p.Ala49Gly
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.146C>G
  hgvsp: ENSP00000378704.2:p.Ala49Gly
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.146C>G
  hgvsp: ENSP00000475691.1:p.Ala49Gly
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.5C>G
  hgvsp: ENSP00000409145.2:p.Ala2Gly
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.146C>G
  hgvsp: ENSP00000378702.1:p.Ala49Gly
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.146C>G
  hgvsp: ENSP00000363958.4:p.Ala49Gly
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-307C>G
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.146C>G
  hgvsp: ENSP00000436322.1:p.Ala49Gly
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 8.75e1
  variant carriers: 158
genotype depth: GenotypeDepth
  all individuals: 12680
  bin: 3.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 5.75e1
  variant carriers: 94
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 8.25e1
  variant carriers: 166
genotype depth: GenotypeDepth
  all individuals: 2451
  bin: 3.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 4.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 9842
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.25e1
  variant carriers: 86
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31110
  bin: 2.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 4.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.25e1
  variant carriers: 146
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.75e1
  variant carriers: 158
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.25e1
  variant carriers: 71
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.75e1
  variant carriers: 116
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 144
genotype quality: GenotypeQuality
hgvs: p.Ala49Gly
num of homozygotes: 28
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum

6-32942355-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942355
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942355
    reference: chr 6
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.146C>T
  hgvsp: ENSP00000378702.1:p.Ala49Val
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.151C>T
  hgvsp: ENSP00000411195.1:p.Ala51Val
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.146C>T
  hgvsp: ENSP00000363964.4:p.Ala49Val
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.5C>T
  hgvsp: ENSP00000409145.2:p.Ala2Val
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.163C>T
  hgvsp: ENSP00000409613.1:p.Ala55Val
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.146C>T
  hgvsp: ENSP00000436322.1:p.Ala49Val
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.146C>T
  hgvsp: ENSP00000378704.2:p.Ala49Val
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-307C>T
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.146C>T
  hgvsp: ENSP00000475691.1:p.Ala49Val
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.146C>T
  hgvsp: ENSP00000431514.1:p.Ala49Val
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.146C>T
  hgvsp: ENSP00000363958.4:p.Ala49Val
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12680
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31110
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9842
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2451
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala49Val
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: DP

6-32942358-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942358
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942358
    reference: chr 6
allele count: 2
allele frequency: 1.647392178181938e-5
allele num: 121404
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.8C>G
  hgvsp: ENSP00000409145.2:p.Ser3Trp
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-304C>G
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.149C>G
  hgvsp: ENSP00000431514.1:p.Ser50Trp
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.149C>G
  hgvsp: ENSP00000363958.4:p.Ser50Trp
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.149C>G
  hgvsp: ENSP00000436322.1:p.Ser50Trp
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.149C>G
  hgvsp: ENSP00000378702.1:p.Ser50Trp
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.166C>G
  hgvsp: ENSP00000409613.1:p.Ser56Trp
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.149C>G
  hgvsp: ENSP00000378704.2:p.Ser50Trp
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.149C>G
  hgvsp: ENSP00000475691.1:p.Ser50Trp
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.149C>G
  hgvsp: ENSP00000363964.4:p.Ser50Trp
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.154C>G
  hgvsp: ENSP00000411195.1:p.Ser52Trp
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32286
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13144
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10172
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2518
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser50Trp
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/6-32942373-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942373
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942373
    reference: chr 6
allele count: 4
allele frequency: 3.294784356363876e-5
allele num: 121404
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.164A>C
  hgvsp: ENSP00000436322.1:p.Gln55Pro
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.164A>C
  hgvsp: ENSP00000363964.4:p.Gln55Pro
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.181A>C
  hgvsp: ENSP00000409613.1:p.Gln61Pro
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.164A>C
  hgvsp: ENSP00000431514.1:p.Gln55Pro
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.164A>C
  hgvsp: ENSP00000378704.2:p.Gln55Pro
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.164A>C
  hgvsp: ENSP00000378702.1:p.Gln55Pro
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-289A>C
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.23A>C
  hgvsp: ENSP00000409145.2:p.Gln8Pro
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.164A>C
  hgvsp: ENSP00000363958.4:p.Gln55Pro
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.164A>C
  hgvsp: ENSP00000475691.1:p.Gln55Pro
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.169A>C
  hgvsp: ENSP00000411195.1:p.Gln57Pro
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32284
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10208
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2517
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13132
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln55Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: European (Finnish)
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

6-32942374-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942374
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942374
    reference: chr 6
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.165A>G
  hgvsp: ENST00000607833.1:c.165A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.165A>G
  hgvsp: ENST00000374831.4:c.165A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.170A>G
  hgvsp: ENST00000456339.1:c.170A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.165A>G
  hgvsp: ENST00000374825.4:c.165A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.165A>G
  hgvsp: ENST00000395287.1:c.165A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.182A>G
  hgvsp: ENST00000449025.1:c.182A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.24A>G
  hgvsp: ENST00000449085.2:c.24A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.165A>G
  hgvsp: ENST00000482914.1:c.165A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.165A>G
  hgvsp: ENST00000395289.2:c.165A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.165A>G
  hgvsp: ENST00000495733.1:c.165A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-288A>G
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2516
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32286
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10209
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13133
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln55Gln
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/6-32942379-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942379
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942379
    reference: chr 6
allele count: 8
allele frequency: 6.589677270555675e-5
allele num: 121402
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.170C>A
  hgvsp: ENSP00000378704.2:p.Thr57Asn
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.170C>A
  hgvsp: ENSP00000431514.1:p.Thr57Asn
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.29C>A
  hgvsp: ENSP00000409145.2:p.Thr10Asn
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.170C>A
  hgvsp: ENSP00000475691.1:p.Thr57Asn
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.170C>A
  hgvsp: ENSP00000378702.1:p.Thr57Asn
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.170C>A
  hgvsp: ENSP00000436322.1:p.Thr57Asn
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.170C>A
  hgvsp: ENSP00000363958.4:p.Thr57Asn
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.170C>A
  hgvsp: ENSP00000363964.4:p.Thr57Asn
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-283C>A
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.187C>A
  hgvsp: ENSP00000409613.1:p.Thr63Asn
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.175C>A
  hgvsp: ENSP00000411195.1:p.Thr59Asn
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10214
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2513
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32293
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr57Asn
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

6-32942379-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942379
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942379
    reference: chr 6
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-283C>G
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.170C>G
  hgvsp: ENSP00000363958.4:p.Thr57Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.170C>G
  hgvsp: ENSP00000475691.1:p.Thr57Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.170C>G
  hgvsp: ENSP00000378702.1:p.Thr57Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.187C>G
  hgvsp: ENSP00000409613.1:p.Thr63Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.170C>G
  hgvsp: ENSP00000363964.4:p.Thr57Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.170C>G
  hgvsp: ENSP00000378704.2:p.Thr57Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.29C>G
  hgvsp: ENSP00000409145.2:p.Thr10Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.175C>G
  hgvsp: ENSP00000411195.1:p.Thr59Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.170C>G
  hgvsp: ENSP00000436322.1:p.Thr57Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.170C>G
  hgvsp: ENSP00000431514.1:p.Thr57Ser
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32293
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10214
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13125
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2513
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr57Ser
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD

6-32942379-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942379
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942379
    reference: chr 6
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.170C>T
  hgvsp: ENSP00000431514.1:p.Thr57Ile
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.170C>T
  hgvsp: ENSP00000475691.1:p.Thr57Ile
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-283C>T
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.170C>T
  hgvsp: ENSP00000363964.4:p.Thr57Ile
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.187C>T
  hgvsp: ENSP00000409613.1:p.Thr63Ile
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.170C>T
  hgvsp: ENSP00000436322.1:p.Thr57Ile
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.29C>T
  hgvsp: ENSP00000409145.2:p.Thr10Ile
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.170C>T
  hgvsp: ENSP00000378702.1:p.Thr57Ile
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.170C>T
  hgvsp: ENSP00000378704.2:p.Thr57Ile
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.175C>T
  hgvsp: ENSP00000411195.1:p.Thr59Ile
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.170C>T
  hgvsp: ENSP00000363958.4:p.Thr57Ile
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10214
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2513
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13125
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32293
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr57Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: Other
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

6-32942380-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942380
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942380
    reference: chr 6
allele count: 2
allele frequency: 1.647419317638919e-5
allele num: 121402
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.30C>G
  hgvsp: ENST00000449085.2:c.30C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.171C>G
  hgvsp: ENST00000607833.1:c.171C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.171C>G
  hgvsp: ENST00000374825.4:c.171C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.171C>G
  hgvsp: ENST00000482914.1:c.171C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.171C>G
  hgvsp: ENST00000395289.2:c.171C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.188C>G
  hgvsp: ENST00000449025.1:c.188C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.171C>G
  hgvsp: ENST00000374831.4:c.171C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-282C>G
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.171C>G
  hgvsp: ENST00000495733.1:c.171C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.171C>G
  hgvsp: ENST00000395287.1:c.171C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.176C>G
  hgvsp: ENST00000456339.1:c.176C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32295
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2515
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13128
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr57Thr
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: MQ

6-32942380-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942380
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942380
    reference: chr 6
allele count: 3
allele frequency: 2.471128976458378e-5
allele num: 121402
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.171C>T
  hgvsp: ENST00000607833.1:c.171C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.30C>T
  hgvsp: ENST00000449085.2:c.30C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.171C>T
  hgvsp: ENST00000374831.4:c.171C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.171C>T
  hgvsp: ENST00000495733.1:c.171C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.188C>T
  hgvsp: ENST00000449025.1:c.188C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.176C>T
  hgvsp: ENST00000456339.1:c.176C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.171C>T
  hgvsp: ENST00000482914.1:c.171C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-282C>T
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.171C>T
  hgvsp: ENST00000374825.4:c.171C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.171C>T
  hgvsp: ENST00000395289.2:c.171C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.171C>T
  hgvsp: ENST00000395287.1:c.171C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2515
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32295
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13128
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10218
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr57Thr
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum

6-32942381-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942381
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942381
    reference: chr 6
allele count: 2
allele frequency: 1.647473599235572e-5
allele num: 121398
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.31C>T
  hgvsp: ENSP00000409145.2:p.Pro11Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.172C>T
  hgvsp: ENSP00000363958.4:p.Pro58Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-281C>T
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.172C>T
  hgvsp: ENSP00000378702.1:p.Pro58Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.172C>T
  hgvsp: ENSP00000475691.1:p.Pro58Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.172C>T
  hgvsp: ENSP00000363964.4:p.Pro58Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.172C>T
  hgvsp: ENSP00000431514.1:p.Pro58Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.189C>T
  hgvsp: ENSP00000409613.1:p.Pro64Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.172C>T
  hgvsp: ENSP00000378704.2:p.Pro58Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.177C>T
  hgvsp: ENSP00000411195.1:p.Pro60Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.172C>T
  hgvsp: ENSP00000436322.1:p.Pro58Ser
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2512
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32294
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13131
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro58Ser
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

6-32942382-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942382
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942382
    reference: chr 6
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.173C>G
  hgvsp: ENSP00000378704.2:p.Pro58Arg
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.173C>G
  hgvsp: ENSP00000475691.1:p.Pro58Arg
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.173C>G
  hgvsp: ENSP00000431514.1:p.Pro58Arg
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.173C>G
  hgvsp: ENSP00000436322.1:p.Pro58Arg
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.173C>G
  hgvsp: ENSP00000363964.4:p.Pro58Arg
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.173C>G
  hgvsp: ENSP00000378702.1:p.Pro58Arg
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.173C>G
  hgvsp: ENSP00000363958.4:p.Pro58Arg
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.190C>G
  hgvsp: ENSP00000409613.1:p.Pro64Arg
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-280C>G
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.178C>G
  hgvsp: ENSP00000411195.1:p.Pro60Arg
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.32C>G
  hgvsp: ENSP00000409145.2:p.Pro11Arg
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2512
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32295
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10231
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13127
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro58Arg
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP

6-32942384-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942384
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942384
    reference: chr 6
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.34G>T
  hgvsp: ENSP00000409145.2:p.Ala12Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.175G>T
  hgvsp: ENSP00000378704.2:p.Ala59Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.180G>T
  hgvsp: ENSP00000411195.1:p.Ala61Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.175G>T
  hgvsp: ENSP00000363964.4:p.Ala59Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.175G>T
  hgvsp: ENSP00000436322.1:p.Ala59Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.175G>T
  hgvsp: ENSP00000475691.1:p.Ala59Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.175G>T
  hgvsp: ENSP00000431514.1:p.Ala59Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-278G>T
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.192G>T
  hgvsp: ENSP00000409613.1:p.Ala65Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.175G>T
  hgvsp: ENSP00000363958.4:p.Ala59Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.175G>T
  hgvsp: ENSP00000378702.1:p.Ala59Ser
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13130
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10228
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2512
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala59Ser
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: DP

http://identifiers.org/exac.variant/6-32942386-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942386
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942386
    reference: chr 6
allele count: 492
allele frequency: 4.052785054119508e-3
allele num: 121398
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.177C>A
  hgvsp: ENST00000607833.1:c.177C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.177C>A
  hgvsp: ENST00000374831.4:c.177C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.36C>A
  hgvsp: ENST00000449085.2:c.36C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.194C>A
  hgvsp: ENST00000449025.1:c.194C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.177C>A
  hgvsp: ENST00000374825.4:c.177C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.177C>A
  hgvsp: ENST00000395287.1:c.177C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.177C>A
  hgvsp: ENST00000482914.1:c.177C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.182C>A
  hgvsp: ENST00000456339.1:c.182C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-276C>A
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.177C>A
  hgvsp: ENST00000395289.2:c.177C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.177C>A
  hgvsp: ENST00000495733.1:c.177C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 6.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 4.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.75e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13124
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 5.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 2502
  bin: 3.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 32293
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 4.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10225
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.75e1
  variant carriers: 161
genotype quality: GenotypeQuality
hgvs: p.Ala59Ala
num of homozygotes: 10
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

6-32942389-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942389
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942389
    reference: chr 6
allele count: 21
allele frequency: 1.729904278629916e-4
allele num: 121394
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.197C>T
  hgvsp: ENST00000449025.1:c.197C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.180C>T
  hgvsp: ENST00000482914.1:c.180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.180C>T
  hgvsp: ENST00000395287.1:c.180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.185C>T
  hgvsp: ENST00000456339.1:c.185C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.180C>T
  hgvsp: ENST00000395289.2:c.180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.39C>T
  hgvsp: ENST00000449085.2:c.39C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.180C>T
  hgvsp: ENST00000495733.1:c.180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.180C>T
  hgvsp: ENST00000607833.1:c.180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.180C>T
  hgvsp: ENST00000374825.4:c.180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-273C>T
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.180C>T
  hgvsp: ENST00000374831.4:c.180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10315
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2510
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32544
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13220
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn60Asn
num of homozygotes: 1
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: C
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

6-32942393-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942393
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942393
    reference: chr 6
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.184C>T
  hgvsp: ENSP00000378704.2:p.Pro62Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.43C>T
  hgvsp: ENSP00000409145.2:p.Pro15Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.201C>T
  hgvsp: ENSP00000409613.1:p.Pro68Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.184C>T
  hgvsp: ENSP00000363964.4:p.Pro62Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.184C>T
  hgvsp: ENSP00000363958.4:p.Pro62Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.184C>T
  hgvsp: ENSP00000436322.1:p.Pro62Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.184C>T
  hgvsp: ENSP00000378702.1:p.Pro62Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-269C>T
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.184C>T
  hgvsp: ENSP00000475691.1:p.Pro62Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.189C>T
  hgvsp: ENSP00000411195.1:p.Pro64Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.184C>T
  hgvsp: ENSP00000431514.1:p.Pro62Ser
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10315
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13222
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32557
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro62Ser
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

6-32942397-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942397
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942397
    reference: chr 6
allele count: 2
allele frequency: 1.647582173160887e-5
allele num: 121390
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.47C>T
  hgvsp: ENSP00000409145.2:p.Pro16Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.188C>T
  hgvsp: ENSP00000475691.1:p.Pro63Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.188C>T
  hgvsp: ENSP00000363958.4:p.Pro63Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.188C>T
  hgvsp: ENSP00000378702.1:p.Pro63Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.188C>T
  hgvsp: ENSP00000436322.1:p.Pro63Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.188C>T
  hgvsp: ENSP00000431514.1:p.Pro63Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.205C>T
  hgvsp: ENSP00000409613.1:p.Pro69Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.188C>T
  hgvsp: ENSP00000378704.2:p.Pro63Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.188C>T
  hgvsp: ENSP00000363964.4:p.Pro63Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-265C>T
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.193C>T
  hgvsp: ENSP00000411195.1:p.Pro65Leu
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10314
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2507
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32562
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13217
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Pro63Leu
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff

6-32942401-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942401
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942401
    reference: chr 6
allele count: 4
allele frequency: 3.295110056675893e-5
allele num: 121392
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.209G>C
  hgvsp: ENST00000449025.1:c.209G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.51G>C
  hgvsp: ENST00000449085.2:c.51G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.192G>C
  hgvsp: ENST00000374825.4:c.192G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.192G>C
  hgvsp: ENST00000495733.1:c.192G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.192G>C
  hgvsp: ENST00000395289.2:c.192G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.192G>C
  hgvsp: ENST00000374831.4:c.192G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.192G>C
  hgvsp: ENST00000395287.1:c.192G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.197G>C
  hgvsp: ENST00000456339.1:c.197G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.192G>C
  hgvsp: ENST00000607833.1:c.192G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-261G>C
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.192G>C
  hgvsp: ENST00000482914.1:c.192G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32564
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10322
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2506
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13211
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Pro64Pro
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

6-32942410-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942410
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942410
    reference: chr 6
allele count: 257
allele frequency: 2.117212858154977e-3
allele num: 121386
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.206C>T
  hgvsp: ENST00000456339.1:c.206C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.201C>T
  hgvsp: ENST00000482914.1:c.201C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.201C>T
  hgvsp: ENST00000374825.4:c.201C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.218C>T
  hgvsp: ENST00000449025.1:c.218C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.201C>T
  hgvsp: ENST00000495733.1:c.201C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.201C>T
  hgvsp: ENST00000395289.2:c.201C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.201C>T
  hgvsp: ENST00000395287.1:c.201C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.201C>T
  hgvsp: ENST00000374831.4:c.201C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.201C>T
  hgvsp: ENST00000607833.1:c.201C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.60C>T
  hgvsp: ENST00000449085.2:c.60C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-252C>T
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 2488
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 32556
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 13205
  bin: 3.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 4.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 4.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10340
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.75e1
  variant carriers: 55
genotype quality: GenotypeQuality
hgvs: p.Ser67Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

6-32942412-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942412
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942412
    reference: chr 6
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-250A>G
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.203A>G
  hgvsp: ENSP00000378704.2:p.Asn68Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.203A>G
  hgvsp: ENSP00000431514.1:p.Asn68Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.203A>G
  hgvsp: ENSP00000436322.1:p.Asn68Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.203A>G
  hgvsp: ENSP00000378702.1:p.Asn68Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.203A>G
  hgvsp: ENSP00000363964.4:p.Asn68Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.203A>G
  hgvsp: ENSP00000475691.1:p.Asn68Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.203A>G
  hgvsp: ENSP00000363958.4:p.Asn68Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.208A>G
  hgvsp: ENSP00000411195.1:p.Asn70Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.62A>G
  hgvsp: ENSP00000409145.2:p.Asn21Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.220A>G
  hgvsp: ENSP00000409613.1:p.Asn74Ser
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2487
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13245
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32705
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10379
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn68Ser
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: ClippingRankSum

6-32942414-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942414
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942414
    reference: chr 6
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.64C>T
  hgvsp: ENSP00000409145.2:p.Pro22Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.205C>T
  hgvsp: ENSP00000378702.1:p.Pro69Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.205C>T
  hgvsp: ENSP00000436322.1:p.Pro69Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.205C>T
  hgvsp: ENSP00000431514.1:p.Pro69Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.210C>T
  hgvsp: ENSP00000411195.1:p.Pro71Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.222C>T
  hgvsp: ENSP00000409613.1:p.Pro75Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.205C>T
  hgvsp: ENSP00000363964.4:p.Pro69Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.205C>T
  hgvsp: ENSP00000378704.2:p.Pro69Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.205C>T
  hgvsp: ENSP00000363958.4:p.Pro69Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.205C>T
  hgvsp: ENSP00000475691.1:p.Pro69Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-248C>T
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2485
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10374
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32706
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13243
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro69Ser
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

6-32942416-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942416
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942416
    reference: chr 6
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.207C>T
  hgvsp: ENST00000395289.2:c.207C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.212C>T
  hgvsp: ENST00000456339.1:c.212C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.207C>T
  hgvsp: ENST00000395287.1:c.207C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.66C>T
  hgvsp: ENST00000449085.2:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.207C>T
  hgvsp: ENST00000374831.4:c.207C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.207C>T
  hgvsp: ENST00000374825.4:c.207C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.224C>T
  hgvsp: ENST00000449025.1:c.224C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-246C>T
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.207C>T
  hgvsp: ENST00000607833.1:c.207C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.207C>T
  hgvsp: ENST00000482914.1:c.207C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.207C>T
  hgvsp: ENST00000495733.1:c.207C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13243
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32705
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10378
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2483
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro69Pro
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD

6-32942422-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942422
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942422
    reference: chr 6
allele count: 2
allele frequency: 1.647799363949445e-5
allele num: 121374
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.213G>A
  hgvsp: ENST00000395289.2:c.213G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.213G>A
  hgvsp: ENST00000374831.4:c.213G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.213G>A
  hgvsp: ENST00000395287.1:c.213G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-240G>A
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.213G>A
  hgvsp: ENST00000482914.1:c.213G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.72G>A
  hgvsp: ENST00000449085.2:c.72G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.213G>A
  hgvsp: ENST00000607833.1:c.213G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.213G>A
  hgvsp: ENST00000495733.1:c.213G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.230G>A
  hgvsp: ENST00000449025.1:c.230G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.218G>A
  hgvsp: ENST00000456339.1:c.218G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.213G>A
  hgvsp: ENST00000374825.4:c.213G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32708
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2481
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10384
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys71Lys
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

6-32942423-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942423
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942423
    reference: chr 6
allele count: 2
allele frequency: 1.647799363949445e-5
allele num: 121374
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.214C>T
  hgvsp: ENSP00000378704.2:p.Pro72Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.214C>T
  hgvsp: ENSP00000431514.1:p.Pro72Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.214C>T
  hgvsp: ENSP00000363964.4:p.Pro72Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.231C>T
  hgvsp: ENSP00000409613.1:p.Pro78Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.214C>T
  hgvsp: ENSP00000378702.1:p.Pro72Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.214C>T
  hgvsp: ENSP00000363958.4:p.Pro72Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.214C>T
  hgvsp: ENSP00000436322.1:p.Pro72Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.214C>T
  hgvsp: ENSP00000475691.1:p.Pro72Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.73C>T
  hgvsp: ENSP00000409145.2:p.Pro25Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.219C>T
  hgvsp: ENSP00000411195.1:p.Pro74Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-239C>T
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13232
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10386
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32705
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro72Ser
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ

6-32942424-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942424
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942424
    reference: chr 6
allele count: 1
allele frequency: 8.239404126293587e-6
allele num: 121368
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.215C>T
  hgvsp: ENSP00000475691.1:p.Pro72Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-238C>T
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.74C>T
  hgvsp: ENSP00000409145.2:p.Pro25Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.220C>T
  hgvsp: ENSP00000411195.1:p.Pro74Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.215C>T
  hgvsp: ENSP00000431514.1:p.Pro72Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.215C>T
  hgvsp: ENSP00000363964.4:p.Pro72Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.215C>T
  hgvsp: ENSP00000363958.4:p.Pro72Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.215C>T
  hgvsp: ENSP00000378704.2:p.Pro72Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.232C>T
  hgvsp: ENSP00000409613.1:p.Pro78Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.215C>T
  hgvsp: ENSP00000378702.1:p.Pro72Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.215C>T
  hgvsp: ENSP00000436322.1:p.Pro72Leu
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32709
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10388
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2481
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13226
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro72Leu
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum

6-32942425-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942425
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942425
    reference: chr 6
allele count: 1
allele frequency: 8.239539904091756e-6
allele num: 121366
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.216A>G
  hgvsp: ENST00000607833.1:c.216A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.216A>G
  hgvsp: ENST00000374825.4:c.216A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.221A>G
  hgvsp: ENST00000456339.1:c.221A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.216A>G
  hgvsp: ENST00000374831.4:c.216A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-237A>G
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.75A>G
  hgvsp: ENST00000449085.2:c.75A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.233A>G
  hgvsp: ENST00000449025.1:c.233A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.216A>G
  hgvsp: ENST00000395287.1:c.216A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.216A>G
  hgvsp: ENST00000395289.2:c.216A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.216A>G
  hgvsp: ENST00000495733.1:c.216A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.216A>G
  hgvsp: ENST00000482914.1:c.216A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2481
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13227
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32702
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10390
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro72Pro
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum

6-32942431-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942431
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942431
    reference: chr 6
allele count: 7
allele frequency: 5.767868031179447e-5
allele num: 121362
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.222A>G
  hgvsp: ENST00000482914.1:c.222A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.81A>G
  hgvsp: ENST00000449085.2:c.81A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.222A>G
  hgvsp: ENST00000374825.4:c.222A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.222A>G
  hgvsp: ENST00000374831.4:c.222A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.222A>G
  hgvsp: ENST00000395289.2:c.222A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.239A>G
  hgvsp: ENST00000449025.1:c.239A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.222A>G
  hgvsp: ENST00000395287.1:c.222A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.227A>G
  hgvsp: ENST00000456339.1:c.227A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.222A>G
  hgvsp: ENST00000495733.1:c.222A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-231A>G
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.222A>G
  hgvsp: ENST00000607833.1:c.222A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13223
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10400
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32698
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2477
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg74Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: African
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

6-32942439-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942439
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942439
    reference: chr 6
allele count: 8
allele frequency: 6.592827004219409e-5
allele num: 121344
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.230A>G
  hgvsp: ENSP00000363964.4:p.Asn77Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-223A>G
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.230A>G
  hgvsp: ENSP00000436322.1:p.Asn77Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.230A>G
  hgvsp: ENSP00000431514.1:p.Asn77Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.230A>G
  hgvsp: ENSP00000363958.4:p.Asn77Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.230A>G
  hgvsp: ENSP00000378702.1:p.Asn77Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.247A>G
  hgvsp: ENSP00000409613.1:p.Asn83Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.230A>G
  hgvsp: ENSP00000378704.2:p.Asn77Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.230A>G
  hgvsp: ENSP00000475691.1:p.Asn77Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.235A>G
  hgvsp: ENSP00000411195.1:p.Asn79Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.89A>G
  hgvsp: ENSP00000409145.2:p.Asn30Ser
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2477
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32683
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13213
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn77Ser
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP

6-32942449-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942449
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942449
    reference: chr 6
allele count: 1
allele frequency: 8.243207596940122e-6
allele num: 121312
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.240A>G
  hgvsp: ENST00000607833.1:c.240A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.240A>G
  hgvsp: ENST00000374831.4:c.240A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.240A>G
  hgvsp: ENST00000482914.1:c.240A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.240A>G
  hgvsp: ENST00000395289.2:c.240A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.99A>G
  hgvsp: ENST00000449085.2:c.99A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.240A>G
  hgvsp: ENST00000374825.4:c.240A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.240A>G
  hgvsp: ENST00000495733.1:c.240A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.257A>G
  hgvsp: ENST00000449025.1:c.257A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.240A>G
  hgvsp: ENST00000395287.1:c.240A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.245A>G
  hgvsp: ENST00000456339.1:c.245A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-213A>G
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2472
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13190
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32664
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln80Gln
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

6-32942453-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942453
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942453
    reference: chr 6
allele count: 1
allele frequency: 8.243207596940122e-6
allele num: 121312
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.244C>G
  hgvsp: ENSP00000475691.1:p.Leu82Val
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.261C>G
  hgvsp: ENSP00000409613.1:p.Leu88Val
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.249C>G
  hgvsp: ENSP00000411195.1:p.Leu84Val
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.244C>G
  hgvsp: ENSP00000436322.1:p.Leu82Val
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.244C>G
  hgvsp: ENSP00000431514.1:p.Leu82Val
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.103C>G
  hgvsp: ENSP00000409145.2:p.Leu35Val
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-209C>G
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.244C>G
  hgvsp: ENSP00000378704.2:p.Leu82Val
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.244C>G
  hgvsp: ENSP00000378702.1:p.Leu82Val
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.244C>G
  hgvsp: ENSP00000363964.4:p.Leu82Val
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.244C>G
  hgvsp: ENSP00000363958.4:p.Leu82Val
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10429
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32663
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2467
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13177
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Leu82Val
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum

6-32942458-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942458
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942458
    reference: chr 6
allele count: 5
allele frequency: 4.122419365477211e-5
allele num: 121288
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.249C>G
  hgvsp: ENSP00000363964.4:p.His83Gln
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-204C>G
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.249C>G
  hgvsp: ENSP00000475691.1:p.His83Gln
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.254C>G
  hgvsp: ENSP00000411195.1:p.His85Gln
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.108C>G
  hgvsp: ENSP00000409145.2:p.His36Gln
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.249C>G
  hgvsp: ENSP00000378702.1:p.His83Gln
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.266C>G
  hgvsp: ENSP00000409613.1:p.His89Gln
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.249C>G
  hgvsp: ENSP00000436322.1:p.His83Gln
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.249C>G
  hgvsp: ENSP00000431514.1:p.His83Gln
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.249C>G
  hgvsp: ENSP00000378704.2:p.His83Gln
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.249C>G
  hgvsp: ENSP00000363958.4:p.His83Gln
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32650
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13164
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2463
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10446
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His83Gln
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

6-32942462-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942462
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942462
    reference: chr 6
allele count: 1
allele frequency: 8.245926512302922e-6
allele num: 121272
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.253G>A
  hgvsp: ENSP00000363958.4:p.Val85Ile
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-200G>A
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.253G>A
  hgvsp: ENSP00000475691.1:p.Val85Ile
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.270G>A
  hgvsp: ENSP00000409613.1:p.Val91Ile
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.253G>A
  hgvsp: ENSP00000378704.2:p.Val85Ile
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.253G>A
  hgvsp: ENSP00000431514.1:p.Val85Ile
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.253G>A
  hgvsp: ENSP00000436322.1:p.Val85Ile
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.253G>A
  hgvsp: ENSP00000378702.1:p.Val85Ile
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.112G>A
  hgvsp: ENSP00000409145.2:p.Val38Ile
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.253G>A
  hgvsp: ENSP00000363964.4:p.Val85Ile
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.258G>A
  hgvsp: ENSP00000411195.1:p.Val87Ile
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2455
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32655
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10454
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13151
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Val85Ile
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum

6-32942466-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942466
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942466
    reference: chr 6
allele count: 1
allele frequency: 8.247422680412371e-6
allele num: 121250
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.257T>C
  hgvsp: ENSP00000363958.4:p.Val86Ala
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.116T>C
  hgvsp: ENSP00000409145.2:p.Val39Ala
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.257T>C
  hgvsp: ENSP00000363964.4:p.Val86Ala
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.274T>C
  hgvsp: ENSP00000409613.1:p.Val92Ala
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.262T>C
  hgvsp: ENSP00000411195.1:p.Val88Ala
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.257T>C
  hgvsp: ENSP00000378704.2:p.Val86Ala
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.257T>C
  hgvsp: ENSP00000378702.1:p.Val86Ala
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.257T>C
  hgvsp: ENSP00000436322.1:p.Val86Ala
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.257T>C
  hgvsp: ENSP00000475691.1:p.Val86Ala
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.257T>C
  hgvsp: ENSP00000431514.1:p.Val86Ala
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-196T>C
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32632
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10460
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2455
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13132
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val86Ala
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
reference allele: T
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ

6-32942477-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942477
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942477
    reference: chr 6
allele count: 1
allele frequency: 8.252459232851389e-6
allele num: 121176
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.273C>G
  hgvsp: ENSP00000411195.1:p.Leu92Val
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.268C>G
  hgvsp: ENSP00000363964.4:p.Leu90Val
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.268C>G
  hgvsp: ENSP00000431514.1:p.Leu90Val
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.268C>G
  hgvsp: ENSP00000436322.1:p.Leu90Val
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.127C>G
  hgvsp: ENSP00000409145.2:p.Leu43Val
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.268C>G
  hgvsp: ENSP00000378702.1:p.Leu90Val
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.268C>G
  hgvsp: ENSP00000363958.4:p.Leu90Val
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.268C>G
  hgvsp: ENSP00000475691.1:p.Leu90Val
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.285C>G
  hgvsp: ENSP00000409613.1:p.Leu96Val
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.268C>G
  hgvsp: ENSP00000378704.2:p.Leu90Val
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-185C>G
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2435
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10501
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32578
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu90Val
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP

6-32942477-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942477
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942477
    reference: chr 6
allele count: 1
allele frequency: 8.252459232851389e-6
allele num: 121176
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.127C>T
  hgvsp: ENST00000449085.2:c.127C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.268C>T
  hgvsp: ENST00000395287.1:c.268C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.268C>T
  hgvsp: ENST00000374825.4:c.268C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.268C>T
  hgvsp: ENST00000395289.2:c.268C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-185C>T
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.268C>T
  hgvsp: ENST00000495733.1:c.268C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.285C>T
  hgvsp: ENST00000449025.1:c.285C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.268C>T
  hgvsp: ENST00000607833.1:c.268C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.268C>T
  hgvsp: ENST00000374831.4:c.268C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.273C>T
  hgvsp: ENST00000456339.1:c.273C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.268C>T
  hgvsp: ENST00000482914.1:c.268C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10501
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32578
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13099
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2435
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu90Leu
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ

6-32942480-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942480
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942480
    reference: chr 6
allele count: 1
allele frequency: 8.254230293025175e-6
allele num: 121150
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.276T>G
  hgvsp: ENSP00000411195.1:p.Trp93Gly
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.271T>G
  hgvsp: ENSP00000431514.1:p.Trp91Gly
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.271T>G
  hgvsp: ENSP00000378702.1:p.Trp91Gly
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.130T>G
  hgvsp: ENSP00000409145.2:p.Trp44Gly
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.271T>G
  hgvsp: ENSP00000363958.4:p.Trp91Gly
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-182T>G
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.288T>G
  hgvsp: ENSP00000409613.1:p.Trp97Gly
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.271T>G
  hgvsp: ENSP00000378704.2:p.Trp91Gly
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.271T>G
  hgvsp: ENSP00000475691.1:p.Trp91Gly
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.271T>G
  hgvsp: ENSP00000436322.1:p.Trp91Gly
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.271T>G
  hgvsp: ENSP00000363964.4:p.Trp91Gly
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32574
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2432
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13077
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10514
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Trp91Gly
num of homozygotes: 0
population: Latino
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: T
site quality: MQ
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

6-32942491-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942491
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942491
    reference: chr 6
allele count: 1
allele frequency: 8.262823902696986e-6
allele num: 121024
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-171G>C
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.282G>C
  hgvsp: ENSP00000475691.1:p.Gln94His
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.282G>C
  hgvsp: ENSP00000431514.1:p.Gln94His
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.282G>C
  hgvsp: ENSP00000378704.2:p.Gln94His
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.287G>C
  hgvsp: ENSP00000411195.1:p.Gln96His
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.282G>C
  hgvsp: ENSP00000378702.1:p.Gln94His
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.282G>C
  hgvsp: ENSP00000363958.4:p.Gln94His
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.299G>C
  hgvsp: ENSP00000409613.1:p.Gln100His
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.282G>C
  hgvsp: ENSP00000363964.4:p.Gln94His
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.282G>C
  hgvsp: ENSP00000436322.1:p.Gln94His
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.141G>C
  hgvsp: ENSP00000409145.2:p.Gln47His
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2407
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32468
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12961
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln94His
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ

6-32942494-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942494
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942494
    reference: chr 6
allele count: 15
allele frequency: 1.239853862558066e-4
allele num: 120982
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.285C>T
  hgvsp: ENST00000395289.2:c.285C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.144C>T
  hgvsp: ENST00000449085.2:c.144C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.285C>T
  hgvsp: ENST00000607833.1:c.285C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.285C>T
  hgvsp: ENST00000395287.1:c.285C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.285C>T
  hgvsp: ENST00000482914.1:c.285C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-168C>T
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.285C>T
  hgvsp: ENST00000374825.4:c.285C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.285C>T
  hgvsp: ENST00000374831.4:c.285C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.290C>T
  hgvsp: ENST00000456339.1:c.290C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.302C>T
  hgvsp: ENST00000449025.1:c.302C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.285C>T
  hgvsp: ENST00000495733.1:c.285C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12920
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32416
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2398
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10551
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Phe95Phe
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

6-32942495-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942495
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942495
    reference: chr 6
allele count: 1
allele frequency: 8.267332462507647e-6
allele num: 120958
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.286G>T
  hgvsp: ENSP00000363958.4:p.Ala96Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.286G>T
  hgvsp: ENSP00000431514.1:p.Ala96Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.286G>T
  hgvsp: ENSP00000378702.1:p.Ala96Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.303G>T
  hgvsp: ENSP00000409613.1:p.Ala102Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.286G>T
  hgvsp: ENSP00000378704.2:p.Ala96Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.145G>T
  hgvsp: ENSP00000409145.2:p.Ala49Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-167G>T
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.286G>T
  hgvsp: ENSP00000436322.1:p.Ala96Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.286G>T
  hgvsp: ENSP00000363964.4:p.Ala96Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.286G>T
  hgvsp: ENSP00000475691.1:p.Ala96Ser
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.291G>T
  hgvsp: ENSP00000411195.1:p.Ala98Ser
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12902
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2394
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10567
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32406
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala96Ser
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: South Asian
population: East Asian
reference allele: G
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

6-32942497-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942497
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942497
    reference: chr 6
allele count: 4
allele frequency: 3.308574169961455e-5
allele num: 120898
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.288A>G
  hgvsp: ENST00000495733.1:c.288A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.288A>G
  hgvsp: ENST00000482914.1:c.288A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.288A>G
  hgvsp: ENST00000395287.1:c.288A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.288A>G
  hgvsp: ENST00000395289.2:c.288A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.288A>G
  hgvsp: ENST00000374825.4:c.288A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.293A>G
  hgvsp: ENST00000456339.1:c.293A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-165A>G
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.288A>G
  hgvsp: ENST00000374831.4:c.288A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.147A>G
  hgvsp: ENST00000449085.2:c.147A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.305A>G
  hgvsp: ENST00000449025.1:c.305A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.288A>G
  hgvsp: ENST00000607833.1:c.288A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12854
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10573
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2387
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala96Ala
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: Other
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

6-32942499-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942499
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942499
    reference: chr 6
allele count: 1
allele frequency: 8.281710670156027e-6
allele num: 120748
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.307G>T
  hgvsp: ENSP00000409613.1:p.Trp103Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.290G>T
  hgvsp: ENSP00000378704.2:p.Trp97Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.295G>T
  hgvsp: ENSP00000411195.1:p.Trp99Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.149G>T
  hgvsp: ENSP00000409145.2:p.Trp50Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.290G>T
  hgvsp: ENSP00000363958.4:p.Trp97Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.290G>T
  hgvsp: ENSP00000363964.4:p.Trp97Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.290G>T
  hgvsp: ENSP00000431514.1:p.Trp97Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.290G>T
  hgvsp: ENSP00000378702.1:p.Trp97Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.290G>T
  hgvsp: ENSP00000436322.1:p.Trp97Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.290G>T
  hgvsp: ENSP00000475691.1:p.Trp97Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-163G>T
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10589
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12770
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2341
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Trp97Leu
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: G
site quality: MQ
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

6-32942503-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942503
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942503
    reference: chr 6
allele count: 1
allele frequency: 8.2847295864263e-6
allele num: 120704
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.294A>G
  hgvsp: ENST00000395287.1:c.294A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.294A>G
  hgvsp: ENST00000482914.1:c.294A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.294A>G
  hgvsp: ENST00000495733.1:c.294A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.311A>G
  hgvsp: ENST00000449025.1:c.311A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.294A>G
  hgvsp: ENST00000395289.2:c.294A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.294A>G
  hgvsp: ENST00000374831.4:c.294A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.294A>G
  hgvsp: ENST00000374825.4:c.294A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-159A>G
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.299A>G
  hgvsp: ENST00000456339.1:c.299A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.153A>G
  hgvsp: ENST00000449085.2:c.153A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.294A>G
  hgvsp: ENST00000607833.1:c.294A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10650
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2299
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12673
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32266
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro98Pro
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: A
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ

6-32942518-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942518
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942518
    reference: chr 6
allele count: 4
allele frequency: 3.333611134261188e-5
allele num: 119990
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.326G>T
  hgvsp: ENST00000449025.1:c.326G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.309G>T
  hgvsp: ENST00000374831.4:c.309G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-144G>T
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.309G>T
  hgvsp: ENST00000395289.2:c.309G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.168G>T
  hgvsp: ENST00000449085.2:c.168G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.309G>T
  hgvsp: ENST00000607833.1:c.309G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.309G>T
  hgvsp: ENST00000395287.1:c.309G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.314G>T
  hgvsp: ENST00000456339.1:c.314G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.309G>T
  hgvsp: ENST00000495733.1:c.309G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.309G>T
  hgvsp: ENST00000374825.4:c.309G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.309G>T
  hgvsp: ENST00000482914.1:c.309G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31836
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10906
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val103Val
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

6-32942523-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942523
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942523
    reference: chr 6
allele count: 29
allele frequency: 2.425844444816221e-4
allele num: 119546
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.314C>T
  hgvsp: ENSP00000436322.1:p.Ala105Val
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.314C>T
  hgvsp: ENSP00000363964.4:p.Ala105Val
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.173C>T
  hgvsp: ENSP00000409145.2:p.Ala58Val
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-139C>T
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.314C>T
  hgvsp: ENSP00000378702.1:p.Ala105Val
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.314C>T
  hgvsp: ENSP00000363958.4:p.Ala105Val
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.331C>T
  hgvsp: ENSP00000409613.1:p.Ala111Val
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.314C>T
  hgvsp: ENSP00000378704.2:p.Ala105Val
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.319C>T
  hgvsp: ENSP00000411195.1:p.Ala107Val
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.314C>T
  hgvsp: ENSP00000431514.1:p.Ala105Val
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.314C>T
  hgvsp: ENSP00000475691.1:p.Ala105Val
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1604
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 4.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31375
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11811
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala105Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

6-32942534-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942534
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942534
    reference: chr 6
allele count: 1
allele frequency: 8.459664320519762e-6
allele num: 118208
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.325G>T
  hgvsp: ENSP00000378702.1:p.Gly109Cys
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.325G>T
  hgvsp: ENSP00000475691.1:p.Gly109Cys
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.325G>T
  hgvsp: ENSP00000378704.2:p.Gly109Cys
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.325G>T
  hgvsp: ENSP00000363964.4:p.Gly109Cys
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.325G>T
  hgvsp: ENSP00000363958.4:p.Gly109Cys
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.325G>T
  hgvsp: ENSP00000431514.1:p.Gly109Cys
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-128G>T
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.330G>T
  hgvsp: ENSP00000411195.1:p.Gly111Cys
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.184G>T
  hgvsp: ENSP00000409145.2:p.Gly62Cys
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.342G>T
  hgvsp: ENSP00000409613.1:p.Gly115Cys
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.325G>T
  hgvsp: ENSP00000436322.1:p.Gly109Cys
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10877
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29837
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11054
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3069
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Gly109Cys
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

6-32942534-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942534
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942534
    reference: chr 6
allele count: 1
allele frequency: 8.459664320519762e-6
allele num: 118208
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.325G>C
  hgvsp: ENSP00000363964.4:p.Gly109Arg
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.330G>C
  hgvsp: ENSP00000411195.1:p.Gly111Arg
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.325G>C
  hgvsp: ENSP00000378702.1:p.Gly109Arg
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.184G>C
  hgvsp: ENSP00000409145.2:p.Gly62Arg
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.325G>C
  hgvsp: ENSP00000475691.1:p.Gly109Arg
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.325G>C
  hgvsp: ENSP00000363958.4:p.Gly109Arg
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.342G>C
  hgvsp: ENSP00000409613.1:p.Gly115Arg
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-128G>C
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.325G>C
  hgvsp: ENSP00000436322.1:p.Gly109Arg
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.325G>C
  hgvsp: ENSP00000378704.2:p.Gly109Arg
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.325G>C
  hgvsp: ENSP00000431514.1:p.Gly109Arg
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11054
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10877
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3069
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly109Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQ

6-32942537-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942537
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942537
    reference: chr 6
allele count: 3
allele frequency: 2.544572427013181e-5
allele num: 117898
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.328C>T
  hgvsp: ENST00000607833.1:c.328C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.328C>T
  hgvsp: ENST00000495733.1:c.328C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.328C>T
  hgvsp: ENST00000374831.4:c.328C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.328C>T
  hgvsp: ENST00000395289.2:c.328C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.328C>T
  hgvsp: ENST00000395287.1:c.328C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.328C>T
  hgvsp: ENST00000482914.1:c.328C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.333C>T
  hgvsp: ENST00000456339.1:c.333C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.187C>T
  hgvsp: ENST00000449085.2:c.187C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.328C>T
  hgvsp: ENST00000374825.4:c.328C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.345C>T
  hgvsp: ENST00000449025.1:c.345C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-125C>T
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10896
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29413
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3456
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1642
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10854
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu110Leu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

6-32942541-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942541
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942541
    reference: chr 6
allele count: 1
allele frequency: 8.531549670682182e-6
allele num: 117212
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.337C>T
  hgvsp: ENSP00000411195.1:p.Pro113Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.332C>T
  hgvsp: ENSP00000475691.1:p.Pro111Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.332C>T
  hgvsp: ENSP00000378702.1:p.Pro111Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.332C>T
  hgvsp: ENSP00000436322.1:p.Pro111Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.332C>T
  hgvsp: ENSP00000363958.4:p.Pro111Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.191C>T
  hgvsp: ENSP00000409145.2:p.Pro64Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.332C>T
  hgvsp: ENSP00000431514.1:p.Pro111Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.332C>T
  hgvsp: ENSP00000363964.4:p.Pro111Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.332C>T
  hgvsp: ENSP00000378704.2:p.Pro111Leu
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-121C>T
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.349C>T
  hgvsp: ENSP00000409613.1:p.Pro117Leu
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4093
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11026
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1906
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10472
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1823
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28635
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro111Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: African
population: Latino
reference allele: C
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQ

6-32942542-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942542
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942542
    reference: chr 6
allele count: 1
allele frequency: 8.545547769612032e-6
allele num: 117020
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.333G>A
  hgvsp: ENST00000395289.2:c.333G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.333G>A
  hgvsp: ENST00000495733.1:c.333G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.333G>A
  hgvsp: ENST00000607833.1:c.333G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.350G>A
  hgvsp: ENST00000449025.1:c.350G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-120G>A
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.338G>A
  hgvsp: ENST00000456339.1:c.338G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.333G>A
  hgvsp: ENST00000395287.1:c.333G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.333G>A
  hgvsp: ENST00000482914.1:c.333G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.333G>A
  hgvsp: ENST00000374831.4:c.333G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.333G>A
  hgvsp: ENST00000374825.4:c.333G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.192G>A
  hgvsp: ENST00000449085.2:c.192G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2019
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4442
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28317
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10281
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11044
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1275
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.333G>A
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum

6-32942545-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942545
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942545
    reference: chr 6
allele count: 1
allele frequency: 8.565310492505354e-6
allele num: 116750
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.350+3G>A
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-120+3G>A
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.192+3G>A
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.333+3G>A
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.333+3G>A
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.333+3G>A
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.333+3G>A
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.338+3G>A
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.333+3G>A
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.333+3G>A
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.333+3G>A
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4885
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27865
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2163
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11113
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10018
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.333+3G>A
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
reference allele: G
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

6-32942545-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942545
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942545
    reference: chr 6
allele count: 1
allele frequency: 8.565310492505354e-6
allele num: 116750
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  hgvsc: ENST00000395287.1:c.333+3G>C
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  hgvsc: ENST00000374831.4:c.333+3G>C
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  hgvsc: ENST00000456339.1:c.338+3G>C
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  hgvsc: ENST00000449025.1:c.350+3G>C
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  hgvsc: ENST00000607833.1:c.333+3G>C
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  hgvsc: ENST00000482914.1:c.333+3G>C
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  hgvsc: ENST00000395289.2:c.333+3G>C
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  hgvsc: ENST00000374825.4:c.333+3G>C
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  hgvsc: ENST00000443797.2:c.-120+3G>C
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  hgvsc: ENST00000495733.1:c.333+3G>C
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  hgvsc: ENST00000449085.2:c.192+3G>C
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10018
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27865
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2163
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4885
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11113
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.333+3G>C
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: MQ

6-32942546-A-AGTAGAGACATTGGAGCC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32942546
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32942563
    reference: chr 6
allele count: 1
allele frequency: 8.573388203017833e-6
allele num: 116640
alternate allele: AGTAGAGACATTGGAGCC
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378702
  ensembl transcript: ENST00000395287
  gene symbol: BRD2
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409613
  ensembl transcript: ENST00000449025
  gene symbol: BRD2
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000409145
  ensembl transcript: ENST00000449085
  gene symbol: BRD2
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000431514
  ensembl transcript: ENST00000482914
  gene symbol: BRD2
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000436322
  ensembl transcript: ENST00000495733
  gene symbol: BRD2
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000475691
  ensembl transcript: ENST00000607833
  gene symbol: BRD2
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000411195
  ensembl transcript: ENST00000456339
  gene symbol: BRD2
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363964
  ensembl transcript: ENST00000374831
  gene symbol: BRD2
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000378704
  ensembl transcript: ENST00000395289
  gene symbol: BRD2
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000363958
  ensembl transcript: ENST00000374825
  gene symbol: BRD2
  variant of: http://identifiers.org/hgnc/1103
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204256
  ensembl protein: ENSP00000413495
  ensembl transcript: ENST00000443797
  gene symbol: BRD2
  variant of: http://identifiers.org/hgnc/1103
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5124
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9918
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27687
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11045
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2224
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1117
  bin: 2.75e1
  variant carriers: 0
hgvs: c.333+6_333+22dupTAGAGACATTGGAGCCG
num of homozygotes: 0
reference allele: A

GenotypeDepth
all individuals: 945
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10760
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 826
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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GenotypeQuality
all individuals: 367
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GenotypeQuality
all individuals: 275
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2468
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GenotypeQuality
all individuals: 902
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GenotypeQuality
all individuals: 43921
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variant carriers: 134

GenotypeQuality
all individuals: 615
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 101
allele frequency: 1.167090362837994e-2
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 1.952831605828451e-4
allele num: 66570
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.591568762957844e-4
allele num: 11576
num of homozygotes: 1

South Asian
type: Population
allele count: 6
allele frequency: 3.701418877236274e-4
allele num: 16210
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 10
allele frequency: 1.511944360447536e-3
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.217294900221729e-3
allele num: 902
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.01e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 4.48e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.52e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.68e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.000000000000001e-2

MQ
type: SiteQuality
SIO_000300: 5.97e1

DP
type: SiteQuality
SIO_000300: 5.556058e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.295e1

MQRankSum
type: SiteQuality
SIO_000300: 3.88e-1

GenotypeDepth
all individuals: 36
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 638
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variant carriers: 0

GenotypeQuality
all individuals: 2
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GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 283
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GenotypeQuality
all individuals: 118
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variant carriers: 0

GenotypeQuality
all individuals: 2
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GenotypeQuality
all individuals: 19
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variant carriers: 1

GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
all individuals: 30
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 10882
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 13
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GenotypeQuality
all individuals: 43927
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variant carriers: 702

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 955
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variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 12
allele frequency: 1.154512218587647e-3
allele num: 10394
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16382
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 89
allele frequency: 1.345630480798307e-2
allele num: 6614
num of homozygotes: 1

Latino
type: Population
allele count: 6
allele frequency: 5.182242183451373e-4
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 6
allele frequency: 6.607929515418502e-3
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 592
allele frequency: 8.880621643515047e-3
allele num: 66662
num of homozygotes: 1

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

DP
type: SiteQuality
SIO_000300: 5.581121e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.110000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

VQSLOD
type: SiteQuality
SIO_000300: 5.98e0

QD
type: SiteQuality
SIO_000300: 1.303e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.977e0

GenotypeDepth
all individuals: 723
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variant carriers: 0

GenotypeQuality
all individuals: 116
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 29
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 18
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GenotypeQuality
all individuals: 3
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GenotypeQuality
all individuals: 10857
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GenotypeQuality
all individuals: 23
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variant carriers: 0

GenotypeQuality
all individuals: 286
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variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66664
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16380
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.561e-1

MQ
type: SiteQuality
SIO_000300: 5.905e1

MQRankSum
type: SiteQuality
SIO_000300: 1.31e0

DP
type: SiteQuality
SIO_000300: 5.560276e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 6.25e-1

QD
type: SiteQuality
SIO_000300: 1.019e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.42e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.791e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.91e-1

GenotypeDepth
all individuals: 859
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2544
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 853
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variant carriers: 0

GenotypeQuality
all individuals: 649
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variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
all individuals: 378
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variant carriers: 0

GenotypeQuality
all individuals: 106
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variant carriers: 0

GenotypeQuality
all individuals: 1
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GenotypeQuality
all individuals: 43912
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 24
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GenotypeQuality
all individuals: 33
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GenotypeQuality
all individuals: 1
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GenotypeQuality
all individuals: 970
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GenotypeQuality
all individuals: 15
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GenotypeQuality
all individuals: 14
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GenotypeQuality
all individuals: 290
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GenotypeQuality
all individuals: 10837
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16398
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.620935154897056e-5
allele num: 10394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66672
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.47e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.35e0

DP
type: SiteQuality
SIO_000300: 5.560567e6

FS
type: SiteQuality
SIO_000300: 5.88e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.53e-1

MQ
type: SiteQuality
SIO_000300: 5.964e1

QD
type: SiteQuality
SIO_000300: 2.464e1

GenotypeDepth
all individuals: 6861
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variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
all individuals: 382
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GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 291
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GenotypeQuality
all individuals: 92
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variant carriers: 0

GenotypeQuality
all individuals: 2
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GenotypeQuality
all individuals: 43917
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
all individuals: 974
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GenotypeQuality
all individuals: 648
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
all individuals: 10874
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variant carriers: 0

GenotypeQuality
all individuals: 857
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variant carriers: 0

GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2545
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66672
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.923816852635629e-4
allele num: 10396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16416
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.15e0

MQ
type: SiteQuality
SIO_000300: 5.924e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.070000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.044e1

FS
type: SiteQuality
SIO_000300: 4.71e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.86e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.937e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.6e-1

DP
type: SiteQuality
SIO_000300: 5.560931e6

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 43915
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variant carriers: 1

GenotypeQuality
all individuals: 83
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499610101373643e-5
allele num: 66684
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16428
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

FS
type: SiteQuality
SIO_000300: 7.33e-1

InbreedingCoeff
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SIO_000300: -1.0e-4

QD
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SIO_000300: 1.471e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.24e-1

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 5.56114e6

MQ
type: SiteQuality
SIO_000300: 5.957e1

VQSLOD
type: SiteQuality
SIO_000300: 9.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.02e-1

GenotypeDepth
all individuals: 2060
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variant carriers: 0

GenotypeQuality
all individuals: 8
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 16
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GenotypeQuality
all individuals: 866
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499295331194339e-5
allele num: 66698
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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num of homozygotes: 0

Other
type: Population
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.647e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.29e-1

MQ
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DP
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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QD
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MQRankSum
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ClippingRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 302
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variant carriers: 0

GenotypeQuality
all individuals: 13
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GenotypeQuality
all individuals: 43936
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498935755613514e-5
allele num: 66714
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.863e0

VQSLOD
type: SiteQuality
SIO_000300: -1.758e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.507e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.553e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.64e-1

QD
type: SiteQuality
SIO_000300: 3.418e1

DP
type: SiteQuality
SIO_000300: 5.563511e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e0

FS
type: SiteQuality
SIO_000300: 3.842e0

GenotypeDepth
all individuals: 1222
bin: 6.75e1
variant carriers: 1163

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 6

GenotypeQuality
all individuals: 442
bin: 7.25e1
variant carriers: 14

GenotypeQuality
all individuals: 8
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 9

GenotypeQuality
all individuals: 50693
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variant carriers: 49818

GenotypeQuality
all individuals: 118
bin: 9.25e1
variant carriers: 38

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 2

GenotypeQuality
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bin: 1.25e1
variant carriers: 2

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 21

GenotypeQuality
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bin: 1.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 25

GenotypeQuality
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variant carriers: 19

GenotypeQuality
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GenotypeQuality
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variant carriers: 37

GenotypeQuality
all individuals: 259
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variant carriers: 38

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 12

Latino
type: Population
allele count: 5954
allele frequency: 5.143400138217e-1
allele num: 11576
num of homozygotes: 1563

East Asian
type: Population
allele count: 4449
allele frequency: 5.152883947185546e-1
allele num: 8634
num of homozygotes: 1097

African
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allele count: 8129
allele frequency: 7.813341022683583e-1
allele num: 10404
num of homozygotes: 3190

European (Finnish)
type: Population
allele count: 4150
allele frequency: 6.276467029643074e-1
allele num: 6612
num of homozygotes: 1291

European (Non-Finnish)
type: Population
allele count: 39399
allele frequency: 5.903887074055204e-1
allele num: 66734
num of homozygotes: 11656

South Asian
type: Population
allele count: 8777
allele frequency: 5.318749242516059e-1
allele num: 16502
num of homozygotes: 2384

Other
type: Population
allele count: 529
allele frequency: 5.838852097130243e-1
allele num: 906
num of homozygotes: 161

BaseQRankSum
type: SiteQuality
SIO_000300: -4.633e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.69e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.68e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.78e-1

QD
type: SiteQuality
SIO_000300: 2.31e1

MQ
type: SiteQuality
SIO_000300: 5.973e1

DP
type: SiteQuality
SIO_000300: 6.514316e6

GenotypeDepth
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3985
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 406
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variant carriers: 0

GenotypeQuality
all individuals: 2570
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.86311e6

MQRankSum
type: SiteQuality
SIO_000300: 1.18e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.5e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.718e0

VQSLOD
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SIO_000300: 1.28e0

MQ
type: SiteQuality
SIO_000300: 5.936e1

QD
type: SiteQuality
SIO_000300: 1.095e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 405
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variant carriers: 0

GenotypeQuality
all individuals: 2592
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.753e1

FS
type: SiteQuality
SIO_000300: 9.644e0

MQRankSum
type: SiteQuality
SIO_000300: 2.29e-1

BaseQRankSum
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SIO_000300: -2.69e0

VQSLOD
type: SiteQuality
SIO_000300: -4.553e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.86248e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.09e0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
all individuals: 9903
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1278
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 16
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3967
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.702e1

FS
type: SiteQuality
SIO_000300: 1.2528e1

MQ
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SIO_000300: 6.0e1

BaseQRankSum
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SIO_000300: 8.050000000000001e0

MQRankSum
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SIO_000300: 5.580000000000001e-1

InbreedingCoeff
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SIO_000300: -1.0e-4

VQSLOD
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ClippingRankSum
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SIO_000300: 1.66e0

ReadPosRankSum
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SIO_000300: -4.63e-1

DP
type: SiteQuality
SIO_000300: 1.862376e6

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 485
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 406
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.862156e6

QD
type: SiteQuality
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ReadPosRankSum
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MQRankSum
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MQ
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InbreedingCoeff
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FS
type: SiteQuality
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 484
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
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East Asian
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FS
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BaseQRankSum
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QD
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VQSLOD
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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MQ
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DP
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GenotypeDepth
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 482
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GenotypeQuality
all individuals: 3958
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.446e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.0e-1

DP
type: SiteQuality
SIO_000300: 1.86161e6

VQSLOD
type: SiteQuality
SIO_000300: -1.228e-1

FS
type: SiteQuality
SIO_000300: 4.588e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.32e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.33e-1

QD
type: SiteQuality
SIO_000300: 1.395e1

GenotypeDepth
all individuals: 420
bin: 4.75e1
variant carriers: 43

GenotypeDepth
all individuals: 259
bin: 8.25e1
variant carriers: 166

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4211
bin: 9.75e1
variant carriers: 2160

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1252
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 455
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39372
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9859
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2561
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2539
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 22
allele frequency: 2.114164904862579e-3
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 108
allele frequency: 9.332872450743173e-3
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 12
allele frequency: 1.386642015253062e-3
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1312
allele frequency: 1.965896490754892e-2
allele num: 66738
num of homozygotes: 13

South Asian
type: Population
allele count: 585
allele frequency: 3.543307086614173e-2
allele num: 16510
num of homozygotes: 13

European (Finnish)
type: Population
allele count: 129
allele frequency: 1.950408224977321e-2
allele num: 6614
num of homozygotes: 2

Other
type: Population
allele count: 21
allele frequency: 2.312775330396476e-2
allele num: 908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.964e1

MQRankSum
type: SiteQuality
SIO_000300: 6.7e-2

FS
type: SiteQuality
SIO_000300: 5.18e-1

QD
type: SiteQuality
SIO_000300: 1.827e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.200000000000001e-3

DP
type: SiteQuality
SIO_000300: 1.901037e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.3e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.477e0

VQSLOD
type: SiteQuality
SIO_000300: 3.6e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.37e-1

GenotypeDepth
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1032
bin: 9.75e1
variant carriers: 918

GenotypeQuality
all individuals: 394
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 455
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2538
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9860
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 39367
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2562
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1252
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4209
bin: 9.75e1
variant carriers: 2160

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1312
allele frequency: 1.965896490754892e-2
allele num: 66738
num of homozygotes: 13

South Asian
type: Population
allele count: 585
allele frequency: 3.543307086614173e-2
allele num: 16510
num of homozygotes: 13

East Asian
type: Population
allele count: 12
allele frequency: 1.386642015253062e-3
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 22
allele frequency: 2.114164904862579e-3
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 129
allele frequency: 1.950408224977321e-2
allele num: 6614
num of homozygotes: 2

Latino
type: Population
allele count: 108
allele frequency: 9.332872450743173e-3
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 21
allele frequency: 2.312775330396476e-2
allele num: 908
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.3e-3

QD
type: SiteQuality
SIO_000300: 1.826e1

VQSLOD
type: SiteQuality
SIO_000300: 4.65e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.08e-1

DP
type: SiteQuality
SIO_000300: 1.901093e6

MQ
type: SiteQuality
SIO_000300: 5.964e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.46e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.26e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.7e-2

GenotypeDepth
all individuals: 1032
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 410
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2538
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39367
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 455
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4209
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9860
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1252
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2562
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.7e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.964e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.46e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.65e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.08e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.3e-3

QD
type: SiteQuality
SIO_000300: 1.826e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.26e-1

DP
type: SiteQuality
SIO_000300: 1.901093e6

GenotypeDepth
all individuals: 120
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40845
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 474
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2638
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 408
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1299
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2648
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2124
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10217
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.756618e6

VQSLOD
type: SiteQuality
SIO_000300: 7.67e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.07e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.75e-1

FS
type: SiteQuality
SIO_000300: 1.831e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.599999999999999e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 4.16e0

MQ
type: SiteQuality
SIO_000300: 5.975e1

QD
type: SiteQuality
SIO_000300: 1.452e1

GenotypeDepth
all individuals: 192
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 95
bin: 8.25e1
variant carriers: 3

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2630
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 473
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40873
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2644
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 407
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2118
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1297
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10216
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.456619426201175e-4
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.11e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.81e0

QD
type: SiteQuality
SIO_000300: 1.272e1

MQRankSum
type: SiteQuality
SIO_000300: 5.659999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 6.858e0

MQ
type: SiteQuality
SIO_000300: 5.978e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.6e-2

DP
type: SiteQuality
SIO_000300: 1.756081e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.0e-2

GenotypeDepth
all individuals: 61
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 388
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1296
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variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 2114
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variant carriers: 1

GenotypeQuality
all individuals: 40874
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 407
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GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 473
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2628
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10217
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2645
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.038e0

FS
type: SiteQuality
SIO_000300: 7.87e0

QD
type: SiteQuality
SIO_000300: 1.717e1

VQSLOD
type: SiteQuality
SIO_000300: -8.348e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.75585e6

MQ
type: SiteQuality
SIO_000300: 5.969e1

MQRankSum
type: SiteQuality
SIO_000300: 3.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.9e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.99e-1

GenotypeDepth
all individuals: 13125
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 62
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1295
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2640
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
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GenotypeQuality
all individuals: 10208
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variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
all individuals: 406
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 40873
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2111
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2628
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 473
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 4.844961240310077e-4
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num of homozygotes: 0

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African
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MQRankSum
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FS
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BaseQRankSum
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MQ
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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DP
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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Latino
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South Asian
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European (Finnish)
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European (Non-Finnish)
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MQRankSum
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DP
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InbreedingCoeff
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FS
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MQ
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VQSLOD
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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East Asian
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African
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FS
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InbreedingCoeff
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DP
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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QD
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MQ
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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Latino
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East Asian
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African
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FS
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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DP
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InbreedingCoeff
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QD
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MQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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South Asian
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European (Non-Finnish)
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FS
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MQ
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VQSLOD
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DP
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InbreedingCoeff
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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MQ
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InbreedingCoeff
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VQSLOD
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MQ
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.26e0

MQ
type: SiteQuality
SIO_000300: 5.98e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.201e1

VQSLOD
type: SiteQuality
SIO_000300: -4.678e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.556e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.477e0

FS
type: SiteQuality
SIO_000300: 8.260999999999999e0

MQRankSum
type: SiteQuality
SIO_000300: 9.29e-1

DP
type: SiteQuality
SIO_000300: 1.754783e6

GenotypeDepth
all individuals: 114
bin: 7.25e1
variant carriers: 33

GenotypeDepth
all individuals: 167
bin: 5.75e1
variant carriers: 27

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1287
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2636
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40909
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2619
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
all individuals: 11
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2131
bin: 9.75e1
variant carriers: 481

GenotypeQuality
all individuals: 461
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10196
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 164
allele frequency: 9.932170542635659e-3
allele num: 16512
num of homozygotes: 5

East Asian
type: Population
allele count: 3
allele frequency: 3.467406380027739e-4
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 5.767012687427913e-4
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 29
allele frequency: 2.50648228176318e-3
allele num: 11570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 6.047777441790142e-4
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 281
allele frequency: 4.210494770595463e-3
allele num: 66738
num of homozygotes: 5

Other
type: Population
allele count: 5
allele frequency: 5.506607929515419e-3
allele num: 908
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.02e-2

DP
type: SiteQuality
SIO_000300: 1.765714e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.562e0

FS
type: SiteQuality
SIO_000300: 1.109e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.45e-1

MQ
type: SiteQuality
SIO_000300: 5.975e1

VQSLOD
type: SiteQuality
SIO_000300: 4.17e0

QD
type: SiteQuality
SIO_000300: 1.169e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.27e-1

GenotypeDepth
all individuals: 219
bin: 5.25e1
variant carriers: 4

GenotypeDepth
all individuals: 134
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1290
bin: 8.25e1
variant carriers: 1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2645
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GenotypeQuality
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GenotypeQuality
all individuals: 16
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GenotypeQuality
all individuals: 10
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GenotypeQuality
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GenotypeQuality
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variant carriers: 19

GenotypeQuality
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GenotypeQuality
all individuals: 12
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1
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GenotypeQuality
all individuals: 8
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GenotypeQuality
all individuals: 13
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variant carriers: 0

GenotypeQuality
all individuals: 10276
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variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 2663
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variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 21
allele frequency: 2.427745664739884e-3
allele num: 8650
num of homozygotes: 1

QD
type: SiteQuality
SIO_000300: 1.078e1

MQ
type: SiteQuality
SIO_000300: 5.955e1

MQRankSum
type: SiteQuality
SIO_000300: 5.3e-2

FS
type: SiteQuality
SIO_000300: 1.109e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.62e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.94e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.87e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.204e0

DP
type: SiteQuality
SIO_000300: 1.734519e6

GenotypeDepth
all individuals: 63
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2509
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variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 41246
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variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
all individuals: 2661
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 466
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GenotypeQuality
all individuals: 2645
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variant carriers: 0

GenotypeQuality
all individuals: 1637
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variant carriers: 1

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 407
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variant carriers: 0

GenotypeQuality
all individuals: 1287
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variant carriers: 0

GenotypeQuality
all individuals: 10278
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.738e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.733286e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.79e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.24e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.331e0

QD
type: SiteQuality
SIO_000300: 1.039e1

GenotypeDepth
all individuals: 214
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 132
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 41249
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variant carriers: 0

GenotypeQuality
all individuals: 10277
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variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
all individuals: 406
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variant carriers: 0

GenotypeQuality
all individuals: 465
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1635
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variant carriers: 2

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2662
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1285
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variant carriers: 0

GenotypeQuality
all individuals: 2640
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.644536652835408e-5
allele num: 11568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.67e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.79e-1

DP
type: SiteQuality
SIO_000300: 1.733072e6

VQSLOD
type: SiteQuality
SIO_000300: 5.36e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.2e-1

FS
type: SiteQuality
SIO_000300: 5.788e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.652e0

QD
type: SiteQuality
SIO_000300: 1.299e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

GenotypeDepth
all individuals: 78
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variant carriers: 0

GenotypeDepth
all individuals: 797
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variant carriers: 0

GenotypeQuality
all individuals: 14
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GenotypeQuality
all individuals: 11
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GenotypeQuality
all individuals: 402
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 0
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GenotypeQuality
all individuals: 10275
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GenotypeQuality
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GenotypeQuality
all individuals: 2659
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GenotypeQuality
all individuals: 8
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GenotypeQuality
all individuals: 465
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GenotypeQuality
all individuals: 8
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GenotypeQuality
all individuals: 2639
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 1631
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variant carriers: 4

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.495324862143371e-5
allele num: 66736
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.79e-1

MQ
type: SiteQuality
SIO_000300: 5.978e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.57e-1

FS
type: SiteQuality
SIO_000300: 1.761e0

VQSLOD
type: SiteQuality
SIO_000300: 1.95e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.32e-1

DP
type: SiteQuality
SIO_000300: 1.732866e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.201e1

GenotypeDepth
all individuals: 52
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variant carriers: 10

GenotypeDepth
all individuals: 41
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variant carriers: 15

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 9
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 13
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GenotypeQuality
all individuals: 0
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GenotypeQuality
all individuals: 1660
bin: 9.75e1
variant carriers: 257

GenotypeQuality
all individuals: 2628
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GenotypeQuality
all individuals: 457
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GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 2648
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 30
allele frequency: 4.495594317568783e-4
allele num: 66732
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 208
allele frequency: 1.99923106497501e-2
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 15
allele frequency: 1.296904720733183e-3
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.202643171806168e-3
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.282e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.9e-2

QD
type: SiteQuality
SIO_000300: 1.198e1

MQRankSum
type: SiteQuality
SIO_000300: 2.41e-1

FS
type: SiteQuality
SIO_000300: 5.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.16e-2

MQ
type: SiteQuality
SIO_000300: 5.972e1

VQSLOD
type: SiteQuality
SIO_000300: 4.57e0

DP
type: SiteQuality
SIO_000300: 1.734604e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.09e-1

GenotypeDepth
all individuals: 60
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variant carriers: 0

GenotypeDepth
all individuals: 38
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GenotypeQuality
all individuals: 396
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2
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GenotypeQuality
all individuals: 10
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GenotypeQuality
all individuals: 19
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 11
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GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 9
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GenotypeQuality
all individuals: 41455
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GenotypeQuality
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GenotypeQuality
all individuals: 15
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GenotypeQuality
all individuals: 2661
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GenotypeQuality
all individuals: 1410
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.98e-2

FS
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BaseQRankSum
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SIO_000300: 1.85e0

InbreedingCoeff
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SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -3.4e-2

ReadPosRankSum
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SIO_000300: -1.209e0

MQ
type: SiteQuality
SIO_000300: 5.93e1

DP
type: SiteQuality
SIO_000300: 1.722711e6

QD
type: SiteQuality
SIO_000300: 1.436e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.21e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

InbreedingCoeff
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QD
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BaseQRankSum
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VQSLOD
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DP
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FS
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ClippingRankSum
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MQRankSum
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SIO_000300: -1.065e0

MQ
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SIO_000300: 5.974e1

ReadPosRankSum
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SIO_000300: -1.7e-2

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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East Asian
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ClippingRankSum
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SIO_000300: -5.2e-2

MQ
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SIO_000300: 5.971e1

MQRankSum
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SIO_000300: 1.13e-1

BaseQRankSum
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SIO_000300: -2.341e0

ReadPosRankSum
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QD
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InbreedingCoeff
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SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 1.81e0

DP
type: SiteQuality
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

South Asian
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East Asian
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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African
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
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MQRankSum
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MQ
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ClippingRankSum
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QD
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VQSLOD
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FS
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ReadPosRankSum
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BaseQRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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East Asian
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allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
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European (Finnish)
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Other
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Latino
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BaseQRankSum
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DP
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FS
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MQRankSum
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InbreedingCoeff
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QD
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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African
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Other
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East Asian
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Latino
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allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
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BaseQRankSum
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QD
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DP
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ReadPosRankSum
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MQRankSum
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FS
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MQ
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

Other
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East Asian
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Latino
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African
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South Asian
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European (Non-Finnish)
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DP
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QD
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VQSLOD
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ReadPosRankSum
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MQRankSum
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FS
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MQ
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

Other
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Latino
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South Asian
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East Asian
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European (Finnish)
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African
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QD
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BaseQRankSum
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MQRankSum
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VQSLOD
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FS
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InbreedingCoeff
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DP
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ReadPosRankSum
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MQ
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ClippingRankSum
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SIO_000300: 4.05e-1

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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Latino
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Other
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European (Finnish)
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South Asian
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European (Non-Finnish)
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BaseQRankSum
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MQ
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FS
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InbreedingCoeff
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MQRankSum
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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QD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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Latino
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European (Non-Finnish)
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South Asian
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Other
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East Asian
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QD
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MQRankSum
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FS
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MQ
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InbreedingCoeff
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DP
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

European (Non-Finnish)
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East Asian
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Latino
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African
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Other
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South Asian
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MQRankSum
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DP
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ClippingRankSum
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QD
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MQ
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InbreedingCoeff
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FS
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

African
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allele num: 10384
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Latino
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European (Finnish)
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European (Non-Finnish)
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East Asian
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Other
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QD
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MQ
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InbreedingCoeff
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MQRankSum
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FS
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ReadPosRankSum
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DP
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

East Asian
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Other
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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European (Finnish)
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South Asian
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MQ
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BaseQRankSum
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DP
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QD
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MQRankSum
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FS
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

European (Non-Finnish)
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Latino
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East Asian
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Other
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African
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European (Finnish)
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DP
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QD
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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MQRankSum
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FS
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BaseQRankSum
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InbreedingCoeff
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

East Asian
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Other
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South Asian
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European (Non-Finnish)
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European (Finnish)
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African
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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FS
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InbreedingCoeff
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MQ
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BaseQRankSum
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MQRankSum
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QD
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SIO_000300: 1.172e1

DP
type: SiteQuality
SIO_000300: 1.714532e6

GenotypeDepth
all individuals: 116
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 55
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1234
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2571
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2612
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10225
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 448
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41428
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1352
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 391
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501231009427731e-5
allele num: 66612
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.27e0

DP
type: SiteQuality
SIO_000300: 1.714532e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.94e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.43e-1

FS
type: SiteQuality
SIO_000300: 2.705e0

QD
type: SiteQuality
SIO_000300: 1.172e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.49e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.377e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

GenotypeDepth
all individuals: 10
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 23
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2610
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variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
all individuals: 1349
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10217
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 446
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2561
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501501501501501e-5
allele num: 66600
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.713751e6

FS
type: SiteQuality
SIO_000300: 2.841e0

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.72e-1

QD
type: SiteQuality
SIO_000300: 1.171e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.69e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.29e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.561e0

GenotypeDepth
all individuals: 23
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10534
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2590
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variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
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variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 387
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1341
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2533
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160900859066636e-4
allele num: 8614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66530
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.76e-1

DP
type: SiteQuality
SIO_000300: 1.709205e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.599999999999999e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.93e-1

QD
type: SiteQuality
SIO_000300: 1.517e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.58e0

FS
type: SiteQuality
SIO_000300: 1.045e1

VQSLOD
type: SiteQuality
SIO_000300: -1.197e0

MQ
type: SiteQuality
SIO_000300: 5.939e1

GenotypeDepth
all individuals: 39
bin: 7.75e1
variant carriers: 1

GenotypeDepth
all individuals: 179
bin: 5.25e1
variant carriers: 4

GenotypeQuality
all individuals: 49
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variant carriers: 0

GenotypeQuality
all individuals: 2522
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variant carriers: 0

GenotypeQuality
all individuals: 383
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 77
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1342
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variant carriers: 15

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 47
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variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21197430614471e-4
allele num: 16502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10310
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.511006856730422e-5
allele num: 66504
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 9
allele frequency: 1.044810773159972e-3
allele num: 8614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

DP
type: SiteQuality
SIO_000300: 1.707563e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.67e-1

FS
type: SiteQuality
SIO_000300: 5.47e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.4e-1

QD
type: SiteQuality
SIO_000300: 1.236e1

VQSLOD
type: SiteQuality
SIO_000300: 1.56e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.570000000000001e-1

GenotypeDepth
all individuals: 55
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 737
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variant carriers: 1

GenotypeQuality
all individuals: 58
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variant carriers: 0

GenotypeQuality
all individuals: 1205
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 62
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GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 101
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variant carriers: 0

GenotypeQuality
all individuals: 428
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variant carriers: 0

GenotypeQuality
all individuals: 81
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variant carriers: 0

GenotypeQuality
all individuals: 2514
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 48
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variant carriers: 0

GenotypeQuality
all individuals: 72
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variant carriers: 0

GenotypeQuality
all individuals: 2570
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variant carriers: 0

GenotypeQuality
all individuals: 1324
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 41260
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10104
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variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 382
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504030802550836e-5
allele num: 66488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10306
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.81e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.7e-3

MQRankSum
type: SiteQuality
SIO_000300: 7.19e-1

DP
type: SiteQuality
SIO_000300: 1.706364e6

QD
type: SiteQuality
SIO_000300: 1.165e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.74e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.36e0

VQSLOD
type: SiteQuality
SIO_000300: 8.49e-1

GenotypeDepth
all individuals: 32348
bin: 2.75e1
variant carriers: 0

GenotypeDepth
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 45
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 65
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variant carriers: 0

GenotypeQuality
all individuals: 429
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GenotypeQuality
all individuals: 382
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variant carriers: 0

GenotypeQuality
all individuals: 68
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variant carriers: 0

GenotypeQuality
all individuals: 1203
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2568
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2507
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.514233797698365e-4
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504845602841149e-5
allele num: 66452
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.674531575294934e-5
allele num: 11528
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.716284492809949e-5
allele num: 10292
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.34e-1

DP
type: SiteQuality
SIO_000300: 1.704037e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.900000000000001e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 6.52e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.71e0

QD
type: SiteQuality
SIO_000300: 1.178e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.69e0

GenotypeDepth
all individuals: 32245
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 23
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variant carriers: 0

GenotypeQuality
all individuals: 75
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GenotypeQuality
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GenotypeQuality
all individuals: 161
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 681
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 40819
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 130
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GenotypeQuality
all individuals: 139
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GenotypeQuality
all individuals: 1201
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 429
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variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.067961165048543e-5
allele num: 16480
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66370
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10268
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.914e1

FS
type: SiteQuality
SIO_000300: 4.869e0

QD
type: SiteQuality
SIO_000300: 1.268e1

MQRankSum
type: SiteQuality
SIO_000300: 4.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.723e0

VQSLOD
type: SiteQuality
SIO_000300: 4.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.8e-3

DP
type: SiteQuality
SIO_000300: 1.698937e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.18e-1

GenotypeDepth
all individuals: 23
bin: 8.75e1
variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

African
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European (Non-Finnish)
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Latino
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allele frequency: 8.685079034219212e-5
allele num: 11514
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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Other
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QD
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ReadPosRankSum
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MQRankSum
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DP
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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FS
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ClippingRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Finnish)
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European (Non-Finnish)
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East Asian
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African
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Latino
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South Asian
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MQ
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MQRankSum
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ReadPosRankSum
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FS
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VQSLOD
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InbreedingCoeff
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DP
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ClippingRankSum
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BaseQRankSum
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QD
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GenotypeDepth
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variant carriers: 4

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 29
allele frequency: 4.410109796526658e-4
allele num: 65758
num of homozygotes: 0

Other
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South Asian
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African
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East Asian
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Latino
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num of homozygotes: 0

European (Finnish)
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MQ
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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FS
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DP
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BaseQRankSum
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QD
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VQSLOD
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ClippingRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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African
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European (Non-Finnish)
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East Asian
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South Asian
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ReadPosRankSum
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MQRankSum
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FS
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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QD
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MQ
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InbreedingCoeff
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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Latino
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East Asian
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South Asian
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African
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European (Finnish)
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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DP
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VQSLOD
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ReadPosRankSum
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FS
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QD
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

European (Finnish)
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allele frequency: 0.0e0
allele num: 6512
num of homozygotes: 0

Latino
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Other
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African
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South Asian
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East Asian
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European (Non-Finnish)
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InbreedingCoeff
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MQRankSum
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MQ
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FS
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QD
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ClippingRankSum
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VQSLOD
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DP
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BaseQRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 64698
num of homozygotes: 0

East Asian
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South Asian
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European (Finnish)
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Other
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African
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Latino
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DP
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FS
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ReadPosRankSum
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MQRankSum
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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QD
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ClippingRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
all individuals: 597
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8185
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1177
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 546
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 963
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4885
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1052
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1904
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1984
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 937
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36480
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8484
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.798169980644026e-5
allele num: 11366
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9710
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64600
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.035e1

DP
type: SiteQuality
SIO_000300: 1.569435e6

VQSLOD
type: SiteQuality
SIO_000300: 6.97e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -4.95e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

FS
type: SiteQuality
SIO_000300: 1.718e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.3e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.54e-1

GenotypeDepth
all individuals: 22
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 109
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1163
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 907
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8108
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 580
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1045
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36433
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5316
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1848
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1172
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 460
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1930
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 1.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6482
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8466
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15400
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.809020436927414e-5
allele num: 11352
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64482
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9686
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.249e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

FS
type: SiteQuality
SIO_000300: 1.353e0

MQRankSum
type: SiteQuality
SIO_000300: 4.61e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.1e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.432e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e0

DP
type: SiteQuality
SIO_000300: 1.556683e6

GenotypeDepth
all individuals: 72
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1371
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5316
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 580
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36433
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1163
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1848
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8108
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1045
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 460
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1930
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1172
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 907
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64482
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11352
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8466
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.54273372415921e-4
allele num: 6482
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9686
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15400
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

VQSLOD
type: SiteQuality
SIO_000300: 1.1e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e0

DP
type: SiteQuality
SIO_000300: 1.556683e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.432e0

MQRankSum
type: SiteQuality
SIO_000300: 4.61e-1

QD
type: SiteQuality
SIO_000300: 1.249e1

FS
type: SiteQuality
SIO_000300: 1.353e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 8084
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36157
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 1.75e1
variant carriers: 0