6-126317144-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126317144
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126317144
    reference: chr 6
allele count: 1
allele frequency: 8.265692417053776e-6
allele num: 120982
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.170A>G
  hgvsp: ENSP00000467035.1:p.Glu57Gly
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000465275
  ensembl transcript: ENST00000473273
  gene symbol: TRMT11
  hgvsc: ENST00000473273.1:c.134A>G
  hgvsp: ENSP00000465275.1:p.Glu45Gly
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.170A>G
  hgvsp: ENSP00000405140.1:p.Glu57Gly
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.-20A>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.170A>G
  hgvsp: ENSP00000433724.1:p.Glu57Gly
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.170A>G
  hgvsp: ENSP00000357316.3:p.Glu57Gly
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.170A>G
  hgvsp: ENSP00000467603.1:p.Glu57Gly
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.170A>G
  hgvsp: ENSP00000333934.5:p.Glu57Gly
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.-20A>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066651
  ensembl transcript: ENST00000489934
  gene symbol: TRMT11
  hgvsc: ENST00000489934.1:n.330A>G
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35246
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4807
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1741
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12770
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Glu57Gly
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD

6-126317156-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126317156
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126317156
    reference: chr 6
allele count: 1
allele frequency: 8.262141216517673e-6
allele num: 121034
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000465275
  ensembl transcript: ENST00000473273
  gene symbol: TRMT11
  hgvsc: ENST00000473273.1:c.146G>T
  hgvsp: ENSP00000465275.1:p.Arg49Ile
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.-8G>T
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.182G>T
  hgvsp: ENSP00000357316.3:p.Arg61Ile
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.-8G>T
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.182G>T
  hgvsp: ENSP00000405140.1:p.Arg61Ile
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.182G>T
  hgvsp: ENSP00000433724.1:p.Arg61Ile
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.182G>T
  hgvsp: ENSP00000467603.1:p.Arg61Ile
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.182G>T
  hgvsp: ENSP00000333934.5:p.Arg61Ile
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066651
  ensembl transcript: ENST00000489934
  gene symbol: TRMT11
  hgvsc: ENST00000489934.1:n.342G>T
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.182G>T
  hgvsp: ENSP00000467035.1:p.Arg61Ile
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1770
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12852
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35153
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4810
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1741
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg61Ile
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: DP

6-126317160-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126317160
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126317160
    reference: chr 6
allele count: 4
allele frequency: 3.304583457255213e-5
allele num: 121044
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.186T>C
  hgvsp: ENST00000450358.1:c.186T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000465275
  ensembl transcript: ENST00000473273
  gene symbol: TRMT11
  hgvsc: ENST00000473273.1:c.150T>C
  hgvsp: ENST00000473273.1:c.150T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066651
  ensembl transcript: ENST00000489934
  gene symbol: TRMT11
  hgvsc: ENST00000489934.1:n.346T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.186T>C
  hgvsp: ENST00000368332.3:c.186T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.186T>C
  hgvsp: ENST00000334379.5:c.186T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.-4T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.-4T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.186T>C
  hgvsp: ENST00000461129.1:c.186T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.186T>C
  hgvsp: ENST00000468097.1:c.186T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.186T>C
  hgvsp: ENST00000479748.1:c.186T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1742
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12845
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35169
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4810
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1766
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Asn62Asn
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP

6-126317170-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126317170
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126317170
    reference: chr 6
allele count: 2
allele frequency: 1.653138483410755e-5
allele num: 120982
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.196C>T
  hgvsp: ENSP00000357316.3:p.Arg66Trp
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000465275
  ensembl transcript: ENST00000473273
  gene symbol: TRMT11
  hgvsc: ENST00000473273.1:c.160C>T
  hgvsp: ENSP00000465275.1:p.Arg54Trp
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.7C>T
  hgvsp: ENSP00000415724.1:p.Arg3Trp
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.196C>T
  hgvsp: ENSP00000433724.1:p.Arg66Trp
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.196C>T
  hgvsp: ENSP00000333934.5:p.Arg66Trp
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.196C>T
  hgvsp: ENSP00000405140.1:p.Arg66Trp
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.196C>T
  hgvsp: ENSP00000467603.1:p.Arg66Trp
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.196C>T
  hgvsp: ENSP00000467035.1:p.Arg66Trp
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.7C>T
  hgvsp: ENSP00000406230.1:p.Arg3Trp
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066651
  ensembl transcript: ENST00000489934
  gene symbol: TRMT11
  hgvsc: ENST00000489934.1:n.356C>T
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1770
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1741
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4825
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34998
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12894
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg66Trp
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum

6-126317171-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126317171
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126317171
    reference: chr 6
allele count: 1
allele frequency: 8.266922390132602e-6
allele num: 120964
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.197G>A
  hgvsp: ENSP00000433724.1:p.Arg66Gln
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.197G>A
  hgvsp: ENSP00000333934.5:p.Arg66Gln
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.197G>A
  hgvsp: ENSP00000405140.1:p.Arg66Gln
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066651
  ensembl transcript: ENST00000489934
  gene symbol: TRMT11
  hgvsc: ENST00000489934.1:n.357G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.8G>A
  hgvsp: ENSP00000406230.1:p.Arg3Gln
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.197G>A
  hgvsp: ENSP00000467035.1:p.Arg66Gln
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000465275
  ensembl transcript: ENST00000473273
  gene symbol: TRMT11
  hgvsc: ENST00000473273.1:c.161G>A
  hgvsp: ENSP00000465275.1:p.Arg54Gln
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.8G>A
  hgvsp: ENSP00000415724.1:p.Arg3Gln
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.197G>A
  hgvsp: ENSP00000357316.3:p.Arg66Gln
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.197G>A
  hgvsp: ENSP00000467603.1:p.Arg66Gln
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1741
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4828
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1774
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34958
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12905
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg66Gln
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

6-126317199-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126317199
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126317199
    reference: chr 6
allele count: 4
allele frequency: 3.323363243602526e-5
allele num: 120360
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000465275
  ensembl transcript: ENST00000473273
  gene symbol: TRMT11
  hgvsc: ENST00000473273.1:c.176+13T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.212+13T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.23+13T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.212+13T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.23+13T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.212+13T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl transcript: ENST00000489934
  gene symbol: TRMT11
  hgvsc: ENST00000489934.1:n.372+13T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.212+13T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.212+13T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.212+13T>C
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4771
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1741
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32768
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12779
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1766
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 559
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1254
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39067
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/6-126317200-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126317200
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126317200
    reference: chr 6
allele count: 6
allele frequency: 4.985210542058559e-5
allele num: 120356
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.212+14A>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000465275
  ensembl transcript: ENST00000473273
  gene symbol: TRMT11
  hgvsc: ENST00000473273.1:c.176+14A>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.212+14A>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.212+14A>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.212+14A>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.212+14A>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.212+14A>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.23+14A>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.23+14A>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl transcript: ENST00000489934
  gene symbol: TRMT11
  hgvsc: ENST00000489934.1:n.372+14A>C
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12789
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32766
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4766
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1741
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1762
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5885
  bin: 9.75e1
  variant carriers: 6
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD

6-126317202-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126317202
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126317202
    reference: chr 6
allele count: 1
allele frequency: 8.313657676831499e-6
allele num: 120284
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.23+16G>T
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.212+16G>T
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.212+16G>T
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.212+16G>T
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.23+16G>T
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.212+16G>T
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl transcript: ENST00000489934
  gene symbol: TRMT11
  hgvsc: ENST00000489934.1:n.372+16G>T
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000465275
  ensembl transcript: ENST00000473273
  gene symbol: TRMT11
  hgvsc: ENST00000473273.1:c.176+16G>T
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.212+16G>T
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.212+16G>T
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32277
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4754
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12740
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1740
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP

6-126317217-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126317217
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126317217
    reference: chr 6
allele count: 1
allele frequency: 8.341118377152009e-6
allele num: 119888
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.212+31T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.23+31T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000465275
  ensembl transcript: ENST00000473273
  gene symbol: TRMT11
  hgvsc: ENST00000473273.1:c.176+31T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.212+31T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.23+31T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.212+31T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.212+31T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.212+31T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.212+31T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl transcript: ENST00000489934
  gene symbol: TRMT11
  hgvsc: ENST00000489934.1:n.372+31T>C
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4738
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1731
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4538
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1740
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11843
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26854
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4560
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 707
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5401
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 591
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: QD

6-126317221-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126317221
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126317221
    reference: chr 6
allele count: 46
allele frequency: 3.842619664188456e-4
allele num: 119710
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.212+35C>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.23+35C>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000465275
  ensembl transcript: ENST00000473273
  gene symbol: TRMT11
  hgvsc: ENST00000473273.1:c.176+35C>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.212+35C>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.212+35C>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.212+35C>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.23+35C>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.212+35C>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl transcript: ENST00000489934
  gene symbol: TRMT11
  hgvsc: ENST00000489934.1:n.372+35C>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.212+35C>G
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7469
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1736
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5173
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4508
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 11197
  bin: 2.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24127
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1740
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1240
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3410
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5906
  bin: 9.75e1
  variant carriers: 44
num of homozygotes: 2
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

6-126317222-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126317222
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126317222
    reference: chr 6
allele count: 1
allele frequency: 8.351288603831571e-6
allele num: 119742
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.212+36T>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.212+36T>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl transcript: ENST00000489934
  gene symbol: TRMT11
  hgvsc: ENST00000489934.1:n.372+36T>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.212+36T>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.212+36T>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000465275
  ensembl transcript: ENST00000473273
  gene symbol: TRMT11
  hgvsc: ENST00000473273.1:c.176+36T>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.212+36T>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.212+36T>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.23+36T>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.23+36T>G
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1740
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24096
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4444
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5190
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7464
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1714
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11307
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1763
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1264
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1252
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff

6-126317224-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126317224
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126317224
    reference: chr 6
allele count: 1
allele frequency: 8.358268835358821e-6
allele num: 119642
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.212+38G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.23+38G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.212+38G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000465275
  ensembl transcript: ENST00000473273
  gene symbol: TRMT11
  hgvsc: ENST00000473273.1:c.176+38G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.212+38G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.212+38G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.23+38G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.212+38G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl transcript: ENST00000489934
  gene symbol: TRMT11
  hgvsc: ENST00000489934.1:n.372+38G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.212+38G>A
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4399
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10923
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1716
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9128
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22730
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5291
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1740
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1728
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5900
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5165
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

6-126317224-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126317224
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126317224
    reference: chr 6
allele count: 40
allele frequency: 3.343307534143528e-4
allele num: 119642
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.212+38G>T
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.212+38G>T
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.212+38G>T
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl transcript: ENST00000489934
  gene symbol: TRMT11
  hgvsc: ENST00000489934.1:n.372+38G>T
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000465275
  ensembl transcript: ENST00000473273
  gene symbol: TRMT11
  hgvsc: ENST00000473273.1:c.176+38G>T
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.212+38G>T
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.23+38G>T
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.23+38G>T
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.212+38G>T
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.212+38G>T
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1716
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5291
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10923
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9128
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22730
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4399
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1740
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1729
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3829
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 2
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD

6-126317231-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126317231
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126317231
    reference: chr 6
allele count: 7
allele frequency: 5.891164935786303e-5
allele num: 118822
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.212+45T>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000465275
  ensembl transcript: ENST00000473273
  gene symbol: TRMT11
  hgvsc: ENST00000473273.1:c.176+45T>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl transcript: ENST00000489934
  gene symbol: TRMT11
  hgvsc: ENST00000489934.1:n.372+45T>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.212+45T>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.212+45T>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.212+45T>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.212+45T>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.23+45T>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.23+45T>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.212+45T>G
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3970
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5255
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9618
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11614
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21829
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5503
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4310
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: African
reference allele: T
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

6-126317236-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126317236
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126317236
    reference: chr 6
allele count: 2
allele frequency: 1.684948356332878e-5
allele num: 118698
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl transcript: ENST00000489934
  gene symbol: TRMT11
  hgvsc: ENST00000489934.1:n.372+50A>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.212+50A>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.212+50A>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.23+50A>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.212+50A>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000465275
  ensembl transcript: ENST00000473273
  gene symbol: TRMT11
  hgvsc: ENST00000473273.1:c.176+50A>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.212+50A>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.212+50A>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.23+50A>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.212+50A>G
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21882
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11517
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9844
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5308
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3712
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3935
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6128
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5514
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/6-126317237-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126317237
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126317237
    reference: chr 6
allele count: 1
allele frequency: 8.444519506840061e-6
allele num: 118420
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl transcript: ENST00000489934
  gene symbol: TRMT11
  hgvsc: ENST00000489934.1:n.372+51C>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.212+51C>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.23+51C>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.212+51C>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.212+51C>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000465275
  ensembl transcript: ENST00000473273
  gene symbol: TRMT11
  hgvsc: ENST00000473273.1:c.176+51C>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.212+51C>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.23+51C>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.212+51C>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.212+51C>A
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5301
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21482
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11504
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10210
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3754
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12083
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2478
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

6-126319150-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319150
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319150
    reference: chr 6
allele count: 1
allele frequency: 8.276638360563474e-6
allele num: 120822
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000465275
  ensembl transcript: ENST00000473273
  gene symbol: TRMT11
  hgvsc: ENST00000473273.1:c.177-49T>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.213-49T>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.213-49T>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl transcript: ENST00000489934
  gene symbol: TRMT11
  hgvsc: ENST00000489934.1:n.373-49T>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.213-49T>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.24-49T>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.213-49T>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.213-219T>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.213-49T>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.24-49T>A
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7617
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16459
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2971
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27737
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 675
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38314
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum

6-126319192-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319192
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319192
    reference: chr 6
allele count: 8
allele frequency: 6.6003333168325e-5
allele num: 121206
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.213-7T>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.213-7T>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl transcript: ENST00000489934
  gene symbol: TRMT11
  hgvsc: ENST00000489934.1:n.373-7T>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000465275
  ensembl transcript: ENST00000473273
  gene symbol: TRMT11
  hgvsc: ENST00000473273.1:c.177-7T>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.213-7T>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.213-7T>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.24-7T>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.24-7T>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.213-177T>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.213-7T>G
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7681
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19373
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28791
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.25e1
  variant carriers: 0
hgvs: c.213-7T>G
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: European (Finnish)
population: East Asian
population: Latino
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

6-126319203-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319203
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319203
    reference: chr 6
allele count: 10
allele frequency: 8.247694769311977e-5
allele num: 121246
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000465275
  ensembl transcript: ENST00000473273
  gene symbol: TRMT11
  hgvsc: ENST00000473273.1:c.181A>G
  hgvsp: ENSP00000465275.1:p.Ile61Val
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.217A>G
  hgvsp: ENSP00000333934.5:p.Ile73Val
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.28A>G
  hgvsp: ENSP00000406230.1:p.Ile10Val
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.217A>G
  hgvsp: ENSP00000467035.1:p.Ile73Val
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.213-166A>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.217A>G
  hgvsp: ENSP00000433724.1:p.Ile73Val
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066651
  ensembl transcript: ENST00000489934
  gene symbol: TRMT11
  hgvsc: ENST00000489934.1:n.377A>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.217A>G
  hgvsp: ENSP00000357316.3:p.Ile73Val
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.217A>G
  hgvsp: ENSP00000405140.1:p.Ile73Val
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.28A>G
  hgvsp: ENSP00000415724.1:p.Ile10Val
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28817
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7682
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1404
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19397
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1930
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ile73Val
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD

6-126319207-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319207
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319207
    reference: chr 6
allele count: 2
allele frequency: 1.649430121892886e-5
allele num: 121254
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.221T>C
  hgvsp: ENSP00000333934.5:p.Phe74Ser
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.221T>C
  hgvsp: ENSP00000357316.3:p.Phe74Ser
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.221T>C
  hgvsp: ENSP00000467035.1:p.Phe74Ser
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.221T>C
  hgvsp: ENSP00000405140.1:p.Phe74Ser
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066651
  ensembl transcript: ENST00000489934
  gene symbol: TRMT11
  hgvsc: ENST00000489934.1:n.381T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.221T>C
  hgvsp: ENSP00000433724.1:p.Phe74Ser
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000465275
  ensembl transcript: ENST00000473273
  gene symbol: TRMT11
  hgvsc: ENST00000473273.1:c.185T>C
  hgvsp: ENSP00000465275.1:p.Phe62Ser
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.32T>C
  hgvsp: ENSP00000415724.1:p.Phe11Ser
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.32T>C
  hgvsp: ENSP00000406230.1:p.Phe11Ser
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.213-162T>C
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7683
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19411
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28825
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1404
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Phe74Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
reference allele: T
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD

6-126319214-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319214
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319214
    reference: chr 6
allele count: 1
allele frequency: 8.245382585751979e-6
allele num: 121280
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.228A>G
  hgvsp: ENST00000450358.1:c.228A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.228A>G
  hgvsp: ENST00000479748.1:c.228A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.228A>G
  hgvsp: ENST00000468097.1:c.228A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.39A>G
  hgvsp: ENST00000444121.1:c.39A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.228A>G
  hgvsp: ENST00000368332.3:c.228A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000465275
  ensembl transcript: ENST00000473273
  gene symbol: TRMT11
  hgvsc: ENST00000473273.1:c.192A>G
  hgvsp: ENST00000473273.1:c.192A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066651
  ensembl transcript: ENST00000489934
  gene symbol: TRMT11
  hgvsc: ENST00000489934.1:n.388A>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.228A>G
  hgvsp: ENST00000334379.5:c.228A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.39A>G
  hgvsp: ENST00000446681.1:c.39A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.213-155A>G
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1402
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7684
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19422
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28830
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu76Leu
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum

6-126319215-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319215
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319214
    reference: chr 6
allele count: 3
allele frequency: 2.473533194815474e-5
allele num: 121284
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066651
  ensembl transcript: ENST00000489934
  gene symbol: TRMT11
  hgvsc: ENST00000489934.1:n.393delG
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.233delG
  hgvsp: ENSP00000433724.1:p.Gly78ValfsTer33
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.233delG
  hgvsp: ENSP00000333934.5:p.Gly78ValfsTer33
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.44delG
  hgvsp: ENSP00000415724.1:p.Gly15ValfsTer33
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.233delG
  hgvsp: ENSP00000467035.1:p.Gly78ValfsTer33
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.213-150delG
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000465275
  ensembl transcript: ENST00000473273
  gene symbol: TRMT11
  hgvsc: ENST00000473273.1:c.197delG
  hgvsp: ENSP00000465275.1:p.Gly66ValfsTer?
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.44delG
  hgvsp: ENSP00000406230.1:p.Gly15ValfsTer33
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.233delG
  hgvsp: ENSP00000405140.1:p.Gly78ValfsTer33
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.233delG
  hgvsp: ENSP00000357316.3:p.Gly78ValfsTer33
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7684
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1402
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28831
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19420
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44105
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gly78ValfsTer33
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
reference allele: TG
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

6-126319222-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319222
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319222
    reference: chr 6
allele count: 1
allele frequency: 8.244430886935875e-6
allele num: 121294
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000465275
  ensembl transcript: ENST00000473273
  gene symbol: TRMT11
  hgvsc: ENST00000473273.1:c.200A>G
  hgvsp: ENSP00000465275.1:p.His67Arg
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.236A>G
  hgvsp: ENSP00000433724.1:p.His79Arg
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.213-147A>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.47A>G
  hgvsp: ENSP00000415724.1:p.His16Arg
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.236A>G
  hgvsp: ENSP00000467035.1:p.His79Arg
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.236A>G
  hgvsp: ENSP00000357316.3:p.His79Arg
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.236A>G
  hgvsp: ENSP00000333934.5:p.His79Arg
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.47A>G
  hgvsp: ENSP00000406230.1:p.His16Arg
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.236A>G
  hgvsp: ENSP00000405140.1:p.His79Arg
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066651
  ensembl transcript: ENST00000489934
  gene symbol: TRMT11
  hgvsc: ENST00000489934.1:n.396A>G
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28838
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7684
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19423
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
hgvs: p.His79Arg
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD

6-126319224-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319224
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319224
    reference: chr 6
allele count: 1
allele frequency: 8.244566830458728e-6
allele num: 121292
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.213-145G>T
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.238G>T
  hgvsp: ENSP00000333934.5:p.Gly80Ter
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.49G>T
  hgvsp: ENSP00000406230.1:p.Gly17Ter
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.238G>T
  hgvsp: ENSP00000405140.1:p.Gly80Ter
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.238G>T
  hgvsp: ENSP00000357316.3:p.Gly80Ter
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.238G>T
  hgvsp: ENSP00000433724.1:p.Gly80Ter
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.49G>T
  hgvsp: ENSP00000415724.1:p.Gly17Ter
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.238G>T
  hgvsp: ENSP00000467035.1:p.Gly80Ter
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066651
  ensembl transcript: ENST00000489934
  gene symbol: TRMT11
  hgvsc: ENST00000489934.1:n.398G>T
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000465275
  ensembl transcript: ENST00000473273
  gene symbol: TRMT11
  hgvsc: ENST00000473273.1:c.202G>T
  hgvsp: ENSP00000465275.1:p.Gly68Ter
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19419
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28841
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7688
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly80Ter
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: African
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum

6-126319239-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319239
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319239
    reference: chr 6
allele count: 1
allele frequency: 8.243887157672586e-6
allele num: 121302
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.64G>A
  hgvsp: ENSP00000415724.1:p.Glu22Lys
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.253G>A
  hgvsp: ENSP00000433724.1:p.Glu85Lys
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.253G>A
  hgvsp: ENSP00000333934.5:p.Glu85Lys
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066651
  ensembl transcript: ENST00000489934
  gene symbol: TRMT11
  hgvsc: ENST00000489934.1:n.413G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000465275
  ensembl transcript: ENST00000473273
  gene symbol: TRMT11
  hgvsc: ENST00000473273.1:c.217G>A
  hgvsp: ENSP00000465275.1:p.Glu73Lys
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.213-130G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.253G>A
  hgvsp: ENSP00000405140.1:p.Glu85Lys
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.64G>A
  hgvsp: ENSP00000406230.1:p.Glu22Lys
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.253G>A
  hgvsp: ENSP00000357316.3:p.Glu85Lys
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.253G>A
  hgvsp: ENSP00000467035.1:p.Glu85Lys
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28837
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7684
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19429
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Glu85Lys
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

6-126319240-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319240
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319240
    reference: chr 6
allele count: 1
allele frequency: 8.243751236562685e-6
allele num: 121304
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000465275
  ensembl transcript: ENST00000473273
  gene symbol: TRMT11
  hgvsc: ENST00000473273.1:c.218A>T
  hgvsp: ENSP00000465275.1:p.Glu73Val
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.254A>T
  hgvsp: ENSP00000333934.5:p.Glu85Val
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.65A>T
  hgvsp: ENSP00000415724.1:p.Glu22Val
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.65A>T
  hgvsp: ENSP00000406230.1:p.Glu22Val
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.254A>T
  hgvsp: ENSP00000467035.1:p.Glu85Val
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.254A>T
  hgvsp: ENSP00000433724.1:p.Glu85Val
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.213-129A>T
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.254A>T
  hgvsp: ENSP00000357316.3:p.Glu85Val
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.254A>T
  hgvsp: ENSP00000405140.1:p.Glu85Val
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066651
  ensembl transcript: ENST00000489934
  gene symbol: TRMT11
  hgvsc: ENST00000489934.1:n.414A>T
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28833
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19433
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7685
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Glu85Val
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

6-126319245-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319245
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319245
    reference: chr 6
allele count: 1
allele frequency: 8.244159013339049e-6
allele num: 121298
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.259T>C
  hgvsp: ENSP00000357316.3:p.Tyr87His
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.259T>C
  hgvsp: ENSP00000405140.1:p.Tyr87His
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.259T>C
  hgvsp: ENSP00000433724.1:p.Tyr87His
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000465275
  ensembl transcript: ENST00000473273
  gene symbol: TRMT11
  hgvsc: ENST00000473273.1:c.223T>C
  hgvsp: ENSP00000465275.1:p.Tyr75His
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.213-124T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.259T>C
  hgvsp: ENSP00000333934.5:p.Tyr87His
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.259T>C
  hgvsp: ENSP00000467035.1:p.Tyr87His
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.70T>C
  hgvsp: ENSP00000415724.1:p.Tyr24His
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.70T>C
  hgvsp: ENSP00000406230.1:p.Tyr24His
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28838
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19422
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7684
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44105
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Tyr87His
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

6-126319249-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319249
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319249
    reference: chr 6
allele count: 4
allele frequency: 3.29777235477435e-5
allele num: 121294
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.263G>A
  hgvsp: ENSP00000467035.1:p.Ser88Asn
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000465275
  ensembl transcript: ENST00000473273
  gene symbol: TRMT11
  hgvsc: ENST00000473273.1:c.227G>A
  hgvsp: ENSP00000465275.1:p.Ser76Asn
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.263G>A
  hgvsp: ENSP00000405140.1:p.Ser88Asn
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.74G>A
  hgvsp: ENSP00000415724.1:p.Ser25Asn
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.263G>A
  hgvsp: ENSP00000357316.3:p.Ser88Asn
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.263G>A
  hgvsp: ENSP00000433724.1:p.Ser88Asn
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.74G>A
  hgvsp: ENSP00000406230.1:p.Ser25Asn
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.263G>A
  hgvsp: ENSP00000333934.5:p.Ser88Asn
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.213-120G>A
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28836
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7684
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19419
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1929
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser88Asn
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

6-126319252-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319252
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319252
    reference: chr 6
allele count: 1
allele frequency: 8.245246615326264e-6
allele num: 121282
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.266C>G
  hgvsp: ENSP00000405140.1:p.Ser89Cys
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.266C>G
  hgvsp: ENSP00000333934.5:p.Ser89Cys
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.266C>G
  hgvsp: ENSP00000467035.1:p.Ser89Cys
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.77C>G
  hgvsp: ENSP00000406230.1:p.Ser26Cys
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.266C>G
  hgvsp: ENSP00000433724.1:p.Ser89Cys
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.213-117C>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000465275
  ensembl transcript: ENST00000473273
  gene symbol: TRMT11
  hgvsc: ENST00000473273.1:c.230C>G
  hgvsp: ENSP00000465275.1:p.Ser77Cys
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.266C>G
  hgvsp: ENSP00000357316.3:p.Ser89Cys
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.77C>G
  hgvsp: ENSP00000415724.1:p.Ser26Cys
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19419
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7683
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28835
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1873
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ser89Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: QD

6-126319265-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319265
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319265
    reference: chr 6
allele count: 1
allele frequency: 8.245790523937529e-6
allele num: 121274
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000465275
  ensembl transcript: ENST00000473273
  gene symbol: TRMT11
  hgvsc: ENST00000473273.1:c.243C>T
  hgvsp: ENST00000473273.1:c.243C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.279C>T
  hgvsp: ENST00000479748.1:c.279C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.213-104C>T
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.279C>T
  hgvsp: ENST00000468097.1:c.279C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.90C>T
  hgvsp: ENST00000444121.1:c.90C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.90C>T
  hgvsp: ENST00000446681.1:c.90C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.279C>T
  hgvsp: ENST00000334379.5:c.279C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.279C>T
  hgvsp: ENST00000450358.1:c.279C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.279C>T
  hgvsp: ENST00000368332.3:c.279C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1397
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7683
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19396
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28832
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1924
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Tyr93Tyr
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP

6-126319266-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319266
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319266
    reference: chr 6
allele count: 1
allele frequency: 8.246198502490351e-6
allele num: 121268
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.91C>T
  hgvsp: ENSP00000406230.1:p.Pro31Ser
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.280C>T
  hgvsp: ENSP00000467035.1:p.Pro94Ser
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.280C>T
  hgvsp: ENSP00000433724.1:p.Pro94Ser
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.280C>T
  hgvsp: ENSP00000333934.5:p.Pro94Ser
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.280C>T
  hgvsp: ENSP00000357316.3:p.Pro94Ser
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.213-103C>T
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000465275
  ensembl transcript: ENST00000473273
  gene symbol: TRMT11
  hgvsc: ENST00000473273.1:c.244C>T
  hgvsp: ENSP00000465275.1:p.Pro82Ser
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.91C>T
  hgvsp: ENSP00000415724.1:p.Pro31Ser
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.280C>T
  hgvsp: ENSP00000405140.1:p.Pro94Ser
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19394
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28832
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7682
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1874
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Pro94Ser
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD

http://identifiers.org/exac.variant/6-126319266-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319266
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319266
    reference: chr 6
allele count: 1
allele frequency: 8.246198502490351e-6
allele num: 121268
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000465275
  ensembl transcript: ENST00000473273
  gene symbol: TRMT11
  hgvsc: ENST00000473273.1:c.244C>A
  hgvsp: ENSP00000465275.1:p.Pro82Thr
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.280C>A
  hgvsp: ENSP00000467035.1:p.Pro94Thr
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.280C>A
  hgvsp: ENSP00000357316.3:p.Pro94Thr
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.91C>A
  hgvsp: ENSP00000415724.1:p.Pro31Thr
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.213-103C>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.280C>A
  hgvsp: ENSP00000433724.1:p.Pro94Thr
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.91C>A
  hgvsp: ENSP00000406230.1:p.Pro31Thr
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.280C>A
  hgvsp: ENSP00000333934.5:p.Pro94Thr
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.280C>A
  hgvsp: ENSP00000405140.1:p.Pro94Thr
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19394
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7682
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28832
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1922
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Pro94Thr
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

6-126319267-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319267
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319267
    reference: chr 6
allele count: 3
allele frequency: 2.473818751546137e-5
allele num: 121270
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.281C>T
  hgvsp: ENSP00000333934.5:p.Pro94Leu
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.281C>T
  hgvsp: ENSP00000357316.3:p.Pro94Leu
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.281C>T
  hgvsp: ENSP00000467035.1:p.Pro94Leu
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.281C>T
  hgvsp: ENSP00000433724.1:p.Pro94Leu
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000465275
  ensembl transcript: ENST00000473273
  gene symbol: TRMT11
  hgvsc: ENST00000473273.1:c.245C>T
  hgvsp: ENSP00000465275.1:p.Pro82Leu
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.92C>T
  hgvsp: ENSP00000415724.1:p.Pro31Leu
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.213-102C>T
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.281C>T
  hgvsp: ENSP00000405140.1:p.Pro94Leu
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.92C>T
  hgvsp: ENSP00000406230.1:p.Pro31Leu
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1397
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19392
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28833
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7682
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 887
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1922
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro94Leu
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

6-126319279-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319279
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319279
    reference: chr 6
allele count: 2
allele frequency: 1.649919978881024e-5
allele num: 121218
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.104T>C
  hgvsp: ENSP00000415724.1:p.Met35Thr
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000465275
  ensembl transcript: ENST00000473273
  gene symbol: TRMT11
  hgvsc: ENST00000473273.1:c.257T>C
  hgvsp: ENSP00000465275.1:p.Met86Thr
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.293T>C
  hgvsp: ENSP00000433724.1:p.Met98Thr
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.293T>C
  hgvsp: ENSP00000333934.5:p.Met98Thr
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.104T>C
  hgvsp: ENSP00000406230.1:p.Met35Thr
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.213-90T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.293T>C
  hgvsp: ENSP00000467035.1:p.Met98Thr
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.293T>C
  hgvsp: ENSP00000405140.1:p.Met98Thr
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.293T>C
  hgvsp: ENSP00000357316.3:p.Met98Thr
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28817
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19335
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7674
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3117
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Met98Thr
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: T
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

6-126319281-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319281
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319281
    reference: chr 6
allele count: 1
allele frequency: 8.250416646040625e-6
allele num: 121206
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.294+1G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.294+1G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.294+1G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.105+1G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.105+1G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.294+1G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.213-88G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.294+1G>A
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28818
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19330
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7669
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3115
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 2.25e1
  variant carriers: 0
hgvs: c.294+1G>A
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum

6-126319283-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319283
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319283
    reference: chr 6
allele count: 2
allele frequency: 1.650273945474949e-5
allele num: 121192
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.213-86G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.294+3G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.294+3G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.294+3G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.294+3G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.294+3G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.105+3G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.105+3G>A
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28812
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19326
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7668
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3114
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1920
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7863
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 885
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
hgvs: c.294+3G>A
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: DP

6-126319284-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319284
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319284
    reference: chr 6
allele count: 6
allele frequency: 4.951230380749617e-5
allele num: 121182
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.294+4C>T
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.213-85C>T
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.294+4C>T
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.294+4C>T
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.105+4C>T
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.294+4C>T
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.294+4C>T
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.105+4C>T
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28807
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1397
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19319
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7671
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 884
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1866
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7861
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
hgvs: c.294+4C>T
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

6-126319285-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319285
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319285
    reference: chr 6
allele count: 2
allele frequency: 1.650682557237418e-5
allele num: 121162
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.294+5G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.294+5G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.105+5G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.294+5G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.105+5G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.294+5G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.213-84G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.294+5G>A
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19298
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28803
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7677
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1864
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3110
  bin: 9.75e1
  variant carriers: 2
hgvs: c.294+5G>A
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

6-126319286-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319286
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319286
    reference: chr 6
allele count: 1
allele frequency: 8.25218682950982e-6
allele num: 121180
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.294+6T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.213-83T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.294+6T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.294+6T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.294+6T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.105+6T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.105+6T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.294+6T>C
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19297
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7676
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28810
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1918
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3109
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1864
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.75e1
  variant carriers: 0
hgvs: c.294+6T>C
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP
site quality: QD
site quality: BaseQRankSum

6-126319295-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319295
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319295
    reference: chr 6
allele count: 2
allele frequency: 1.651500388102591e-5
allele num: 121102
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.294+15G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.105+15G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.294+15G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.294+15G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.294+15G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.213-74G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.105+15G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.294+15G>A
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28801
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19179
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7677
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43839
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1854
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum

6-126319308-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319308
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319308
    reference: chr 6
allele count: 1
allele frequency: 8.279790686891435e-6
allele num: 120776
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.294+28G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.294+28G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.105+28G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.105+28G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.294+28G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.294+28G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.294+28G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.213-61G>A
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18725
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7674
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1408
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28753
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3107
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 869
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1911
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: Latino
reference allele: G
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

6-126319309-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319309
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319309
    reference: chr 6
allele count: 9
allele frequency: 7.454403896168437e-5
allele num: 120734
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.294+29G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.213-60G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.294+29G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.294+29G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.294+29G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.105+29G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.294+29G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.105+29G>A
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18635
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7680
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28722
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1841
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3110
  bin: 9.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum

6-126319311-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319311
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319311
    reference: chr 6
allele count: 1
allele frequency: 8.286651861182008e-6
allele num: 120676
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.294+31A>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.294+31A>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.105+31A>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.294+31A>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.294+31A>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.213-58A>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.294+31A>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.105+31A>G
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18498
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7677
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28715
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1895
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1844
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: QD

6-126319314-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319314
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319314
    reference: chr 6
allele count: 1
allele frequency: 8.293524416135881e-6
allele num: 120576
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.105+34C>T
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.294+34C>T
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.213-55C>T
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.294+34C>T
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.294+34C>T
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.294+34C>T
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.105+34C>T
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.294+34C>T
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18339
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7671
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28708
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7722
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum

6-126319315-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319315
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319315
    reference: chr 6
allele count: 1
allele frequency: 8.293799555452344e-6
allele num: 120572
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.294+35G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.105+35G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.294+35G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.294+35G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.105+35G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.294+35G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.294+35G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.213-54G>A
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18332
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28726
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7675
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1394
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1830
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 864
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42953
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

6-126319320-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319320
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319320
    reference: chr 6
allele count: 1
allele frequency: 8.311032063961702e-6
allele num: 120322
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.294+40G>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.105+40G>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.294+40G>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.294+40G>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.294+40G>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.105+40G>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.213-49G>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.294+40G>C
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7620
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28577
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17807
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 984
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1814
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 425
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum

6-126319326-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319326
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319326
    reference: chr 6
allele count: 1
allele frequency: 8.327226700419692e-6
allele num: 120088
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.106-43G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.295-43G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.295-43G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.295-43G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.213-43G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.106-43G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.295-43G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.295-43G>A
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17456
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7508
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28457
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1379
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1143
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: QD

6-126319337-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319337
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319337
    reference: chr 6
allele count: 2
allele frequency: 1.67369619066747e-5
allele num: 119496
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.295-32A>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.295-32A>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.106-32A>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.295-32A>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.213-32A>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.106-32A>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.295-32A>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.295-32A>G
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7132
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27749
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17321
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3094
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 731
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/6-126319342-C-CA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319342
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319343
    reference: chr 6
allele count: 1
allele frequency: 8.38940250675347e-6
allele num: 119198
alternate allele: CA
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.213-21dupA
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.106-21dupA
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.295-21dupA
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.295-21dupA
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.106-21dupA
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.295-21dupA
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.295-21dupA
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.295-21dupA
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7031
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1850
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1462
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17394
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27422
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1687
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39754
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1687
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum

6-126319350-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319350
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319350
    reference: chr 6
allele count: 1
allele frequency: 8.415100055539661e-6
allele num: 118834
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.106-19T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.295-19T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.106-19T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.295-19T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.213-19T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.295-19T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.295-19T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.295-19T>C
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17396
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6771
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1275
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26975
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1806
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1652
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 795
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 935
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 654
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ

6-126319360-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319360
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319360
    reference: chr 6
allele count: 1
allele frequency: 8.448229251148959e-6
allele num: 118368
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.106-9T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.295-9T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.106-9T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.295-9T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.295-9T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.213-9T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.295-9T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.295-9T>C
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17818
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26352
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6424
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2461
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1783
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 882
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 544
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2051
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1537
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP

6-126319368-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319368
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319368
    reference: chr 6
allele count: 1
allele frequency: 8.462527926342156e-6
allele num: 118168
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.295-1G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.295-1G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.106-1G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.295-1G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.213-1G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.295-1G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.295-1G>A
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.106-1G>A
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2195
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18499
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25955
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6278
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 871
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 588
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2202
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 701
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
hgvs: c.295-1G>A
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD

6-126319369-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319369
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319369
    reference: chr 6
allele count: 1
allele frequency: 8.463817181548878e-6
allele num: 118150
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.295G>A
  hgvsp: ENSP00000333934.5:p.Val99Ile
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.295G>A
  hgvsp: ENSP00000467035.1:p.Val99Ile
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.295G>A
  hgvsp: ENSP00000433724.1:p.Val99Ile
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.295G>A
  hgvsp: ENSP00000405140.1:p.Val99Ile
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.213G>A
  hgvsp: ENST00000461129.1:c.213G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.106G>A
  hgvsp: ENSP00000415724.1:p.Val36Ile
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.106G>A
  hgvsp: ENSP00000406230.1:p.Val36Ile
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.295G>A
  hgvsp: ENSP00000357316.3:p.Val99Ile
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6260
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2162
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25943
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18553
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 686
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Val99Ile
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: MQRankSum

6-126319375-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319375
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319375
    reference: chr 6
allele count: 1
allele frequency: 8.477881207928515e-6
allele num: 117954
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.301T>C
  hgvsp: ENSP00000357316.3:p.Phe101Leu
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.301T>C
  hgvsp: ENSP00000405140.1:p.Phe101Leu
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.301T>C
  hgvsp: ENSP00000467035.1:p.Phe101Leu
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.112T>C
  hgvsp: ENSP00000406230.1:p.Phe38Leu
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.301T>C
  hgvsp: ENSP00000333934.5:p.Phe101Leu
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.219T>C
  hgvsp: ENST00000461129.1:c.219T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.112T>C
  hgvsp: ENSP00000415724.1:p.Phe38Leu
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.301T>C
  hgvsp: ENSP00000433724.1:p.Phe101Leu
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2013
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1419
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18833
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25843
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6147
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 782
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 670
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 756
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Phe101Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/6-126319382-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319382
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319382
    reference: chr 6
allele count: 2
allele frequency: 1.699379726399864e-5
allele num: 117690
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.308A>C
  hgvsp: ENSP00000405140.1:p.His103Pro
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.226A>C
  hgvsp: ENSP00000467603.1:p.Ile76Leu
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.308A>C
  hgvsp: ENSP00000433724.1:p.His103Pro
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.119A>C
  hgvsp: ENSP00000406230.1:p.His40Pro
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.308A>C
  hgvsp: ENSP00000333934.5:p.His103Pro
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.119A>C
  hgvsp: ENSP00000415724.1:p.His40Pro
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.308A>C
  hgvsp: ENSP00000467035.1:p.His103Pro
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.308A>C
  hgvsp: ENSP00000357316.3:p.His103Pro
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1173
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6056
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1858
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19133
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25661
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 658
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1446
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 8.75e1
  variant carriers: 0
hgvs: p.His103Pro
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: BaseQRankSum

6-126319382-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319382
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319382
    reference: chr 6
allele count: 1
allele frequency: 8.49689863199932e-6
allele num: 117690
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.119A>G
  hgvsp: ENSP00000406230.1:p.His40Arg
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.308A>G
  hgvsp: ENSP00000405140.1:p.His103Arg
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.308A>G
  hgvsp: ENSP00000333934.5:p.His103Arg
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.308A>G
  hgvsp: ENSP00000467035.1:p.His103Arg
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.308A>G
  hgvsp: ENSP00000433724.1:p.His103Arg
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.226A>G
  hgvsp: ENSP00000467603.1:p.Ile76Val
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.308A>G
  hgvsp: ENSP00000357316.3:p.His103Arg
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.119A>G
  hgvsp: ENSP00000415724.1:p.His40Arg
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25661
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1173
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1858
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19133
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6056
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 700
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 698
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 7.5e0
  variant carriers: 0
hgvs: p.His103Arg
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

6-126319384-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319384
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319384
    reference: chr 6
allele count: 3
allele frequency: 2.550933641712867e-5
allele num: 117604
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.121T>G
  hgvsp: ENSP00000406230.1:p.Ser41Ala
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.121T>G
  hgvsp: ENSP00000415724.1:p.Ser41Ala
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.228T>G
  hgvsp: ENSP00000467603.1:p.Ile76Met
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.310T>G
  hgvsp: ENSP00000405140.1:p.Ser104Ala
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.310T>G
  hgvsp: ENSP00000357316.3:p.Ser104Ala
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.310T>G
  hgvsp: ENSP00000333934.5:p.Ser104Ala
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.310T>G
  hgvsp: ENSP00000467035.1:p.Ser104Ala
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.310T>G
  hgvsp: ENSP00000433724.1:p.Ser104Ala
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1812
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19235
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1557
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25542
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6049
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3070
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 6018
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 687
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 543
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser104Ala
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: T
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ

6-126319386-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319386
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319386
    reference: chr 6
allele count: 1
allele frequency: 8.510783162266591e-6
allele num: 117498
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.123G>A
  hgvsp: ENST00000446681.1:c.123G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.230G>A
  hgvsp: ENSP00000467603.1:p.Arg77Gln
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.312G>A
  hgvsp: ENST00000468097.1:c.312G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.312G>A
  hgvsp: ENST00000479748.1:c.312G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.312G>A
  hgvsp: ENST00000368332.3:c.312G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.312G>A
  hgvsp: ENST00000450358.1:c.312G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.123G>A
  hgvsp: ENST00000444121.1:c.123G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.312G>A
  hgvsp: ENST00000334379.5:c.312G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19334
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6020
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25520
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1792
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3066
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 741
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40439
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg77Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum

6-126319386-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319386
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319386
    reference: chr 6
allele count: 1
allele frequency: 8.510783162266591e-6
allele num: 117498
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.123G>T
  hgvsp: ENST00000444121.1:c.123G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.312G>T
  hgvsp: ENST00000468097.1:c.312G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.230G>T
  hgvsp: ENSP00000467603.1:p.Arg77Leu
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.312G>T
  hgvsp: ENST00000450358.1:c.312G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.312G>T
  hgvsp: ENST00000368332.3:c.312G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.312G>T
  hgvsp: ENST00000334379.5:c.312G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.123G>T
  hgvsp: ENST00000446681.1:c.123G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.312G>T
  hgvsp: ENST00000479748.1:c.312G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6020
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19334
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1792
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25520
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40439
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1428
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 666
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg77Leu
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS

6-126319390-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319390
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319390
    reference: chr 6
allele count: 1
allele frequency: 8.51469636592759e-6
allele num: 117444
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.316T>G
  hgvsp: ENSP00000433724.1:p.Ser106Ala
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.316T>G
  hgvsp: ENSP00000405140.1:p.Ser106Ala
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.127T>G
  hgvsp: ENSP00000406230.1:p.Ser43Ala
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.234T>G
  hgvsp: ENST00000461129.1:c.234T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.316T>G
  hgvsp: ENSP00000333934.5:p.Ser106Ala
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.316T>G
  hgvsp: ENSP00000357316.3:p.Ser106Ala
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.127T>G
  hgvsp: ENSP00000415724.1:p.Ser43Ala
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.316T>G
  hgvsp: ENSP00000467035.1:p.Ser106Ala
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25396
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1792
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1667
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5956
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19624
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1625
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5987
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2528
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser106Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
population: African
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum

6-126319395-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319395
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319395
    reference: chr 6
allele count: 1
allele frequency: 8.525439912699495e-6
allele num: 117296
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.132A>G
  hgvsp: ENST00000444121.1:c.132A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.239A>G
  hgvsp: ENSP00000467603.1:p.His80Arg
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.321A>G
  hgvsp: ENST00000334379.5:c.321A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.321A>G
  hgvsp: ENST00000368332.3:c.321A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.321A>G
  hgvsp: ENST00000479748.1:c.321A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.132A>G
  hgvsp: ENST00000446681.1:c.132A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.321A>G
  hgvsp: ENST00000450358.1:c.321A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.321A>G
  hgvsp: ENST00000468097.1:c.321A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1709
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1792
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19850
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5909
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25281
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 505
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1403
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 738
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 9.25e1
  variant carriers: 0
hgvs: p.His80Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

6-126319397-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319397
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319397
    reference: chr 6
allele count: 1
allele frequency: 8.527184664711099e-6
allele num: 117272
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.323A>G
  hgvsp: ENSP00000357316.3:p.Tyr108Cys
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.323A>G
  hgvsp: ENSP00000433724.1:p.Tyr108Cys
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.323A>G
  hgvsp: ENSP00000405140.1:p.Tyr108Cys
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.323A>G
  hgvsp: ENSP00000333934.5:p.Tyr108Cys
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.134A>G
  hgvsp: ENSP00000415724.1:p.Tyr45Cys
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.323A>G
  hgvsp: ENSP00000467035.1:p.Tyr108Cys
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.241A>G
  hgvsp: ENSP00000467603.1:p.Ile81Val
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.134A>G
  hgvsp: ENSP00000406230.1:p.Tyr45Cys
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1718
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25242
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1423
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19997
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5903
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 734
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 482
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 529
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Tyr108Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ

6-126319401-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319401
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319401
    reference: chr 6
allele count: 1
allele frequency: 8.537668192063383e-6
allele num: 117128
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.245A>G
  hgvsp: ENSP00000467603.1:p.Lys82Arg
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.138A>G
  hgvsp: ENST00000444121.1:c.138A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.327A>G
  hgvsp: ENST00000479748.1:c.327A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.327A>G
  hgvsp: ENST00000334379.5:c.327A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.327A>G
  hgvsp: ENST00000468097.1:c.327A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.327A>G
  hgvsp: ENST00000368332.3:c.327A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.138A>G
  hgvsp: ENST00000446681.1:c.138A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.327A>G
  hgvsp: ENST00000450358.1:c.327A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5875
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20123
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1780
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25236
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3064
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 534
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41583
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 459
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Lys82Arg
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

6-126319418-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319418
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319418
    reference: chr 6
allele count: 2
allele frequency: 1.720400509238551e-5
allele num: 116252
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.344T>C
  hgvsp: ENSP00000433724.1:p.Phe115Ser
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.344T>C
  hgvsp: ENSP00000467035.1:p.Phe115Ser
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.344T>C
  hgvsp: ENSP00000405140.1:p.Phe115Ser
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.344T>C
  hgvsp: ENSP00000333934.5:p.Phe115Ser
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.155T>C
  hgvsp: ENSP00000415724.1:p.Phe52Ser
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.344T>C
  hgvsp: ENSP00000357316.3:p.Phe115Ser
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.*13T>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.155T>C
  hgvsp: ENSP00000406230.1:p.Phe52Ser
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25079
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2122
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2204
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5789
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19959
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3417
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41292
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 511
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Phe115Ser
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/6-126319420-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319420
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319420
    reference: chr 6
allele count: 1
allele frequency: 8.607481623026734e-6
allele num: 116178
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.157A>C
  hgvsp: ENSP00000415724.1:p.Asn53His
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.346A>C
  hgvsp: ENSP00000433724.1:p.Asn116His
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.346A>C
  hgvsp: ENSP00000405140.1:p.Asn116His
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.157A>C
  hgvsp: ENSP00000406230.1:p.Asn53His
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.*15A>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.346A>C
  hgvsp: ENSP00000333934.5:p.Asn116His
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.346A>C
  hgvsp: ENSP00000467035.1:p.Asn116His
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.346A>C
  hgvsp: ENSP00000357316.3:p.Asn116His
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5769
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25041
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19924
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2252
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 511
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3515
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Asn116His
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ
site quality: FS

6-126319433-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319433
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319433
    reference: chr 6
allele count: 27
allele frequency: 2.34937871984964e-4
allele num: 114924
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.359C>G
  hgvsp: ENSP00000405140.1:p.Thr120Arg
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.359C>G
  hgvsp: ENSP00000467035.1:p.Thr120Arg
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.359C>G
  hgvsp: ENSP00000333934.5:p.Thr120Arg
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.359C>G
  hgvsp: ENSP00000357316.3:p.Thr120Arg
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.170C>G
  hgvsp: ENSP00000406230.1:p.Thr57Arg
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.*28C>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.359C>G
  hgvsp: ENSP00000433724.1:p.Thr120Arg
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.170C>G
  hgvsp: ENSP00000415724.1:p.Thr57Arg
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18970
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24677
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2985
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5677
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2806
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 4.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4558
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 670
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 673
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Thr120Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP

http://identifiers.org/exac.variant/6-126319434-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319434
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319434
    reference: chr 6
allele count: 1
allele frequency: 8.715660298424209e-6
allele num: 114736
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.171A>C
  hgvsp: ENST00000444121.1:c.171A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.360A>C
  hgvsp: ENST00000468097.1:c.360A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.*29A>C
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.171A>C
  hgvsp: ENST00000446681.1:c.171A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.360A>C
  hgvsp: ENST00000334379.5:c.360A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.360A>C
  hgvsp: ENST00000368332.3:c.360A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.360A>C
  hgvsp: ENST00000479748.1:c.360A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.360A>C
  hgvsp: ENST00000450358.1:c.360A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24604
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5647
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3163
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18768
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2918
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1284
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 704
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 689
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 700
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr120Thr
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: East Asian
population: Latino
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff

6-126319439-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319439
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319439
    reference: chr 6
allele count: 1
allele frequency: 8.758561493860249e-6
allele num: 114174
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.365A>G
  hgvsp: ENSP00000467035.1:p.Glu122Gly
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.365A>G
  hgvsp: ENSP00000433724.1:p.Glu122Gly
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.365A>G
  hgvsp: ENSP00000357316.3:p.Glu122Gly
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.365A>G
  hgvsp: ENSP00000333934.5:p.Glu122Gly
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.*34A>G
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.176A>G
  hgvsp: ENSP00000415724.1:p.Glu59Gly
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.176A>G
  hgvsp: ENSP00000406230.1:p.Glu59Gly
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.365A>G
  hgvsp: ENSP00000405140.1:p.Glu122Gly
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3523
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5587
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3201
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18426
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24403
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 663
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 782
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Glu122Gly
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: VQSLOD

6-126319440-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319440
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319440
    reference: chr 6
allele count: 1
allele frequency: 8.781790080089925e-6
allele num: 113872
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.366A>G
  hgvsp: ENST00000479748.1:c.366A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.177A>G
  hgvsp: ENST00000444121.1:c.177A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.366A>G
  hgvsp: ENST00000368332.3:c.366A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.366A>G
  hgvsp: ENST00000334379.5:c.366A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.366A>G
  hgvsp: ENST00000450358.1:c.366A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.177A>G
  hgvsp: ENST00000446681.1:c.177A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.366A>G
  hgvsp: ENST00000468097.1:c.366A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.*35A>G
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3754
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3334
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5572
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18144
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24280
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3046
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 838
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Glu122Glu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

6-126319453-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126319453
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126319453
    reference: chr 6
allele count: 1
allele frequency: 9.014368904033029e-6
allele num: 110934
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467035
  ensembl transcript: ENST00000468097
  gene symbol: TRMT11
  hgvsc: ENST00000468097.1:c.379C>T
  hgvsp: ENSP00000467035.1:p.Arg127Ter
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000333934
  ensembl transcript: ENST00000334379
  gene symbol: TRMT11
  hgvsc: ENST00000334379.5:c.379C>T
  hgvsp: ENSP00000333934.5:p.Arg127Ter
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000467603
  ensembl transcript: ENST00000461129
  gene symbol: TRMT11
  hgvsc: ENST00000461129.1:c.*48C>T
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000357316
  ensembl transcript: ENST00000368332
  gene symbol: TRMT11
  hgvsc: ENST00000368332.3:c.379C>T
  hgvsp: ENSP00000357316.3:p.Arg127Ter
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000433724
  ensembl transcript: ENST00000479748
  gene symbol: TRMT11
  hgvsc: ENST00000479748.1:c.379C>T
  hgvsp: ENSP00000433724.1:p.Arg127Ter
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000406230
  ensembl transcript: ENST00000444121
  gene symbol: TRMT11
  hgvsc: ENST00000444121.1:c.190C>T
  hgvsp: ENSP00000406230.1:p.Arg64Ter
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000405140
  ensembl transcript: ENST00000450358
  gene symbol: TRMT11
  hgvsc: ENST00000450358.1:c.379C>T
  hgvsp: ENSP00000405140.1:p.Arg127Ter
  variant of: http://identifiers.org/hgnc/21080
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000066651
  ensembl protein: ENSP00000415724
  ensembl transcript: ENST00000446681
  gene symbol: TRMT11
  hgvsc: ENST00000446681.1:c.190C>T
  hgvsp: ENSP00000415724.1:p.Arg64Ter
  variant of: http://identifiers.org/hgnc/21080
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4632
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22785
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6348
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15382
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1440
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5394
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 708
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8394
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35025
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg127Ter
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5958
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 703
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5892
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 566
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2128
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1324
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1893
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41715
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.710801393728223e-5
allele num: 11480
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16454
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66518
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.5e-1

MQ
type: SiteQuality
SIO_000300: 5.925e1

MQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.026e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.14e0

DP
type: SiteQuality
SIO_000300: 1.788508e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 7.3e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.423e0

GenotypeQuality
all individuals: 17
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1326
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2125
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1881
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41666
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5891
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 29
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5965
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 566
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 703
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16452
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502674761074713e-5
allele num: 66548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.715e0

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -5.03e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 4.8e-2

MQ
type: SiteQuality
SIO_000300: 5.876e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.28e-1

QD
type: SiteQuality
SIO_000300: 1.155e1

DP
type: SiteQuality
SIO_000300: 1.789185e6

GenotypeQuality
all individuals: 40
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2126
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 703
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1880
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5972
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5894
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1326
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41793
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 566
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16452
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.009976561091412e-5
allele num: 66556
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.71e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.96e-1

QD
type: SiteQuality
SIO_000300: 1.32e1

FS
type: SiteQuality
SIO_000300: 4.14e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.34e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.29e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.7e-1

DP
type: SiteQuality
SIO_000300: 1.789387e6

GenotypeQuality
all individuals: 28
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1877
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1325
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5890
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41682
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 565
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 703
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2123
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5954
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.628345850182938e-5
allele num: 10386
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66524
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.08198515995621e-5
allele num: 16442
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.788757e6

VQSLOD
type: SiteQuality
SIO_000300: 7.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.0e-3

QD
type: SiteQuality
SIO_000300: 1.289e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 1.512e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.46e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.51e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.86e-1

GenotypeQuality
all individuals: 5954
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5889
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 64
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 565
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1324
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41659
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1873
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2120
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 704
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503442884204829e-5
allele num: 66514
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16440
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.34e0

MQRankSum
type: SiteQuality
SIO_000300: -1.57e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -3.153e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e-1

DP
type: SiteQuality
SIO_000300: 1.788489e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.87e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.98e-1

GenotypeQuality
all individuals: 1833
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 587
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2079
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 444
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 695
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1301
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5779
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5885
bin: 9.75e1
variant carriers: 4

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
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South Asian
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allele frequency: 2.443195699975568e-4
allele num: 16372
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11420
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.765961e6

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 7.6e-2

FS
type: SiteQuality
SIO_000300: 2.661e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.79e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.751620248730075e-4
allele num: 11418
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16372
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 6.051071039574004e-5
allele num: 66104
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.423e1

DP
type: SiteQuality
SIO_000300: 1.765907e6

MQ
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BaseQRankSum
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ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
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SIO_000300: 3.43e-1

FS
type: SiteQuality
SIO_000300: 2.344e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.33e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.513546238837597e-5
allele num: 66070
num of homozygotes: 0

South Asian
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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QD
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
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MQ
type: SiteQuality
SIO_000300: 5.843e1

DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10338
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65820
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.785802143735723e-5
allele num: 11382
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.3e-1

DP
type: SiteQuality
SIO_000300: 1.707415e6

BaseQRankSum
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SIO_000300: 5.1e0

VQSLOD
type: SiteQuality
SIO_000300: -2.25e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.48e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.33e-1

FS
type: SiteQuality
SIO_000300: 1.7929e1

QD
type: SiteQuality
SIO_000300: 2.035e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11360
num of homozygotes: 0

European (Finnish)
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allele count: 38
allele frequency: 5.797985962770827e-3
allele num: 6554
num of homozygotes: 2

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

European (Non-Finnish)
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allele count: 8
allele frequency: 1.21750776161198e-4
allele num: 65708
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.978e1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.019e0

MQRankSum
type: SiteQuality
SIO_000300: 2.31e-1

DP
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ClippingRankSum
type: SiteQuality
SIO_000300: 2.3e-1

QD
type: SiteQuality
SIO_000300: 1.631e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.42e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.9e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.521838380763963e-5
allele num: 65710
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Other
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South Asian
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ReadPosRankSum
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DP
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QD
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MQRankSum
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BaseQRankSum
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VQSLOD
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FS
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ClippingRankSum
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SIO_000300: -7.93e-1

MQ
type: SiteQuality
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InbreedingCoeff
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SIO_000300: 1.2e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
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num of homozygotes: 0

Latino
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Non-Finnish)
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East Asian
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Other
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South Asian
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allele num: 16282
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InbreedingCoeff
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MQRankSum
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VQSLOD
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MQ
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FS
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BaseQRankSum
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ClippingRankSum
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DP
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 36

East Asian
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African
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Latino
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European (Finnish)
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South Asian
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Other
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European (Non-Finnish)
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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MQ
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ReadPosRankSum
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FS
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QD
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

South Asian
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allele count: 7
allele frequency: 4.325259515570934e-4
allele num: 16184
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65148
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11264
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10286
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.648749e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.350000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.61e0

FS
type: SiteQuality
SIO_000300: 2.047e0

VQSLOD
type: SiteQuality
SIO_000300: 1.54e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -7.3e-2

QD
type: SiteQuality
SIO_000300: 1.377e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.43e-1

GenotypeQuality
all individuals: 14286
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variant carriers: 0

GenotypeQuality
all individuals: 440
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5865
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4412
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.777777777777778e-4
allele num: 11250
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16170
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10284
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65072
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.798e1

MQRankSum
type: SiteQuality
SIO_000300: -8.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.05e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.03e0

DP
type: SiteQuality
SIO_000300: 1.64651e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.51e0

VQSLOD
type: SiteQuality
SIO_000300: 6.59e-1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1252
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variant carriers: 0

GenotypeQuality
all individuals: 689
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.185822095756526e-5
allele num: 16166
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10276
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64866
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6520
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8486
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11216
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.336e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.0e0

MQRankSum
type: SiteQuality
SIO_000300: -2.0e-1

QD
type: SiteQuality
SIO_000300: 1.557e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

DP
type: SiteQuality
SIO_000300: 1.648818e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.01e-1

GenotypeQuality
all individuals: 1528
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
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variant carriers: 0

GenotypeQuality
all individuals: 52
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1267
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 543
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2060
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GenotypeQuality
all individuals: 239
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GenotypeQuality
all individuals: 1018
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variant carriers: 0

GenotypeQuality
all individuals: 7809
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variant carriers: 0

GenotypeQuality
all individuals: 3141
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16446
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11462
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505253334136135e-5
allele num: 66434
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.43e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.9e-3

QD
type: SiteQuality
SIO_000300: 1.441e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.468e0

DP
type: SiteQuality
SIO_000300: 1.713962e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.64e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.01e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.911e1

MQRankSum
type: SiteQuality
SIO_000300: -6.7e-2

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7877
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variant carriers: 0

GenotypeQuality
all individuals: 319
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 20
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variant carriers: 0

GenotypeQuality
all individuals: 1932
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variant carriers: 0

GenotypeQuality
all individuals: 20
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 447
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GenotypeQuality
all individuals: 3131
bin: 9.75e1
variant carriers: 8

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 890
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
all individuals: 1879
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.20037211535576e-4
allele num: 66646
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.09e-1

QD
type: SiteQuality
SIO_000300: 1.381e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.68e0

DP
type: SiteQuality
SIO_000300: 1.744885e6

VQSLOD
type: SiteQuality
SIO_000300: 7.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.65e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -9.57e-1

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 3134
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variant carriers: 10

GenotypeQuality
all individuals: 16
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 6
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 890
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variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 9
allele frequency: 7.8125e-4
allele num: 11520
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66660
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.54e0

MQRankSum
type: SiteQuality
SIO_000300: 4.37e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

FS
type: SiteQuality
SIO_000300: 1.186e0

QD
type: SiteQuality
SIO_000300: 1.396e1

DP
type: SiteQuality
SIO_000300: 1.745439e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -4.17e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.85e0

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66666
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.311604253351826e-4
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.944e1

DP
type: SiteQuality
SIO_000300: 1.745206e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.86e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.45e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 3.336e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.69e0

QD
type: SiteQuality
SIO_000300: 1.338e1

MQRankSum
type: SiteQuality
SIO_000300: 4.66e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.98e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66678
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.21e0

VQSLOD
type: SiteQuality
SIO_000300: -4.161e-1

DP
type: SiteQuality
SIO_000300: 1.745383e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

FS
type: SiteQuality
SIO_000300: 1.647e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.58e0

ReadPosRankSum
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SIO_000300: -1.246e0

QD
type: SiteQuality
SIO_000300: 1.016e1

MQ
type: SiteQuality
SIO_000300: 5.946e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.15e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 2.999310158663508e-5
allele num: 66682
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.673026886383348e-5
allele num: 11530
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

InbreedingCoeff
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FS
type: SiteQuality
SIO_000300: 5.14e-1

DP
type: SiteQuality
SIO_000300: 1.745469e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.504e0

MQ
type: SiteQuality
SIO_000300: 5.986e1

MQRankSum
type: SiteQuality
SIO_000300: 2.27e-1

VQSLOD
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SIO_000300: 1.67e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.4e-1

QD
type: SiteQuality
SIO_000300: 1.222e1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499520153550864e-5
allele num: 66688
num of homozygotes: 0

VQSLOD
type: SiteQuality
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ReadPosRankSum
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SIO_000300: 1.52e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.675e0

DP
type: SiteQuality
SIO_000300: 1.745493e6

FS
type: SiteQuality
SIO_000300: 8.71e-1

BaseQRankSum
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SIO_000300: -1.814e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -2.24e-1

QD
type: SiteQuality
SIO_000300: 1.031e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66688
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

VQSLOD
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SIO_000300: -1.969e0

InbreedingCoeff
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SIO_000300: 1.1e-3

DP
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SIO_000300: 1.745532e6

MQRankSum
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ReadPosRankSum
type: SiteQuality
SIO_000300: 8.95e-1

FS
type: SiteQuality
SIO_000300: 9.129e0

BaseQRankSum
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SIO_000300: -6.11e-1

QD
type: SiteQuality
SIO_000300: 6.87e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

ClippingRankSum
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SIO_000300: -6.96e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49947518368571e-5
allele num: 66690
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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QD
type: SiteQuality
SIO_000300: 1.834e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.76e-1

FS
type: SiteQuality
SIO_000300: 7.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.316e0

VQSLOD
type: SiteQuality
SIO_000300: -6.553e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.93e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

DP
type: SiteQuality
SIO_000300: 1.745399e6

MQ
type: SiteQuality
SIO_000300: 5.961e1

GenotypeQuality
all individuals: 72
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1929
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49947518368571e-5
allele num: 66690
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.727e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.75e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

DP
type: SiteQuality
SIO_000300: 1.745403e6

FS
type: SiteQuality
SIO_000300: 7.65e-1

MQRankSum
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SIO_000300: 2.92e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

QD
type: SiteQuality
SIO_000300: 1.815e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.01e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499520153550864e-5
allele num: 66688
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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East Asian
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MQ
type: SiteQuality
SIO_000300: 5.954e1

BaseQRankSum
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MQRankSum
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InbreedingCoeff
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FS
type: SiteQuality
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VQSLOD
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ReadPosRankSum
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DP
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ClippingRankSum
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QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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num of homozygotes: 0

South Asian
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allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499610101373643e-5
allele num: 66684
num of homozygotes: 0

Other
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 8.667013347200555e-5
allele num: 11538
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MQRankSum
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VQSLOD
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InbreedingCoeff
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DP
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BaseQRankSum
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FS
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MQ
type: SiteQuality
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QD
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
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allele num: 66682
num of homozygotes: 0

African
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Other
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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South Asian
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East Asian
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VQSLOD
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InbreedingCoeff
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DP
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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MQ
type: SiteQuality
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FS
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QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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African
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European (Non-Finnish)
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Latino
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European (Finnish)
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BaseQRankSum
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VQSLOD
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MQ
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ReadPosRankSum
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MQRankSum
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QD
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InbreedingCoeff
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FS
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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Latino
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European (Non-Finnish)
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European (Finnish)
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African
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Other
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QD
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ClippingRankSum
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FS
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MQ
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Finnish)
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South Asian
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East Asian
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African
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European (Non-Finnish)
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InbreedingCoeff
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MQ
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MQRankSum
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FS
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VQSLOD
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DP
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ReadPosRankSum
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BaseQRankSum
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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European (Non-Finnish)
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East Asian
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Latino
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Other
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South Asian
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MQRankSum
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MQ
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VQSLOD
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FS
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InbreedingCoeff
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DP
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ClippingRankSum
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QD
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Non-Finnish)
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Latino
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European (Finnish)
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African
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East Asian
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South Asian
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QD
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FS
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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DP
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VQSLOD
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InbreedingCoeff
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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African
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European (Finnish)
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European (Non-Finnish)
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South Asian
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Other
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InbreedingCoeff
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VQSLOD
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MQRankSum
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DP
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ReadPosRankSum
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MQ
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ClippingRankSum
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QD
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FS
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Other
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South Asian
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African
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East Asian
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Latino
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European (Non-Finnish)
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FS
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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MQ
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ReadPosRankSum
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VQSLOD
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QD
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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East Asian
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European (Finnish)
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African
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ClippingRankSum
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DP
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QD
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InbreedingCoeff
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FS
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MQRankSum
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VQSLOD
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.001741009785676e-5
allele num: 66628
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.53e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.48e-1

QD
type: SiteQuality
SIO_000300: 1.111e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 8.46e-1

DP
type: SiteQuality
SIO_000300: 1.743091e6

MQRankSum
type: SiteQuality
SIO_000300: 9.59e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 1
allele frequency: 9.643201542912247e-5
allele num: 10370
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.19e0

MQRankSum
type: SiteQuality
SIO_000300: 1.68e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.72e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.673e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.975e1

DP
type: SiteQuality
SIO_000300: 1.743074e6

QD
type: SiteQuality
SIO_000300: 1.651e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.85e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10332
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501185936890143e-5
allele num: 66614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157675387821255e-4
allele num: 8638
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.742076e6

VQSLOD
type: SiteQuality
SIO_000300: -1.314e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.321e0

MQ
type: SiteQuality
SIO_000300: 3.838e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.205e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.59e0

FS
type: SiteQuality
SIO_000300: 1.4985e1

QD
type: SiteQuality
SIO_000300: 6.66e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.928e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504755025881786e-5
allele num: 66456
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10264
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.737604e6

MQ
type: SiteQuality
SIO_000300: 5.917e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.03e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 6.3e-2

FS
type: SiteQuality
SIO_000300: 3.475e0

VQSLOD
type: SiteQuality
SIO_000300: -2.585e-1

QD
type: SiteQuality
SIO_000300: 1.567e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.02e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 4
allele frequency: 3.902439024390244e-4
allele num: 10250
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.515216278859757e-5
allele num: 66442
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.740947075208914e-4
allele num: 11488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.14e0

FS
type: SiteQuality
SIO_000300: 2.142e0

DP
type: SiteQuality
SIO_000300: 1.736584e6

QD
type: SiteQuality
SIO_000300: 1.418e1

MQ
type: SiteQuality
SIO_000300: 5.978e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -5.048e0

MQRankSum
type: SiteQuality
SIO_000300: 2.2e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.22e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10220
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66428
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.070171178827243e-5
allele num: 16474
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 904
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ClippingRankSum
type: SiteQuality
SIO_000300: -7.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.94e0

FS
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -5.610000000000001e-1

BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 6.5e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.734426e6

QD
type: SiteQuality
SIO_000300: 1.439e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10194
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.707767328456984e-5
allele num: 11484
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66370
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.985e1

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.922e0

DP
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MQRankSum
type: SiteQuality
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VQSLOD
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.13e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10194
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8578
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506704836522525e-5
allele num: 66370
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16470
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
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Other
type: Population
allele count: 0
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QD
type: SiteQuality
SIO_000300: 5.44e0

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 139
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50934283213089e-5
allele num: 66254
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

ClippingRankSum
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FS
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QD
type: SiteQuality
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BaseQRankSum
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.924573243350536e-5
allele num: 10076
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66120
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.33e0

ReadPosRankSum
type: SiteQuality
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MQRankSum
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ClippingRankSum
type: SiteQuality
SIO_000300: -4.46e-1

BaseQRankSum
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SIO_000300: -6.383e0

DP
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.969e1

QD
type: SiteQuality
SIO_000300: 1.134e1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11442
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16408
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8462
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.040992579978105e-5
allele num: 65768
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.79e0

QD
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MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
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VQSLOD
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SIO_000300: -7.7e-3

DP
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SIO_000300: 1.699029e6

MQRankSum
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SIO_000300: -5.56e-1

FS
type: SiteQuality
SIO_000300: 6.124e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.54e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.25e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11428
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9924
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.186802753382388e-4
allele num: 8426
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65592
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16390
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.3e-2

MQ
type: SiteQuality
SIO_000300: 5.956e1

DP
type: SiteQuality
SIO_000300: 1.69309e6

VQSLOD
type: SiteQuality
SIO_000300: -3.013e0

ClippingRankSum
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SIO_000300: -1.286e0

QD
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SIO_000300: 2.75e0

FS
type: SiteQuality
SIO_000300: 1.5259e1

MQRankSum
type: SiteQuality
SIO_000300: -3.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.154e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16364
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11404
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9824
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8404
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.528911720637251e-5
allele num: 65406
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.74e0

QD
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SIO_000300: 1.263e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.39e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.56e-1

FS
type: SiteQuality
SIO_000300: 2.814e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.11e0

VQSLOD
type: SiteQuality
SIO_000300: -3.936e-1

DP
type: SiteQuality
SIO_000300: 1.680832e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.117704637220115e-5
allele num: 16346
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11380
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6524
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9700
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65132
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -5.078e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.528e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

FS
type: SiteQuality
SIO_000300: 1.922e0

MQRankSum
type: SiteQuality
SIO_000300: -1.599e0

QD
type: SiteQuality
SIO_000300: 1.007e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.24e0

DP
type: SiteQuality
SIO_000300: 1.667437e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16336
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.538366869731093e-5
allele num: 65004
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Other
type: Population
allele count: 0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6524
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Latino
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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ReadPosRankSum
type: SiteQuality
SIO_000300: 8.98e-1

ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6522
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64990
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South Asian
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allele frequency: 6.122199093914534e-5
allele num: 16334
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
type: Population
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allele frequency: 0.0e0
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Other
type: Population
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East Asian
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
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DP
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
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VQSLOD
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QD
type: SiteQuality
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MQ
type: SiteQuality
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MQRankSum
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SIO_000300: 1.89e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.190759704691593e-4
allele num: 8398
num of homozygotes: 0

Latino
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Other
type: Population
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 64874
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African
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South Asian
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MQRankSum
type: SiteQuality
SIO_000300: 1.49e0

DP
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
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FS
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ReadPosRankSum
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MQ
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 882
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 2.09819555182543e-4
allele num: 9532
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South Asian
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allele count: 0
allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
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VQSLOD
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SIO_000300: -5.328000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.937e1

FS
type: SiteQuality
SIO_000300: 1.1398e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

DP
type: SiteQuality
SIO_000300: 1.656021e6

QD
type: SiteQuality
SIO_000300: 1.114e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.35e0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 390
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 747
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64708
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11358
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6514
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.137228427642077e-5
allele num: 16294
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.656021e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.35e0

QD
type: SiteQuality
SIO_000300: 1.114e1

MQ
type: SiteQuality
SIO_000300: 5.937e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

FS
type: SiteQuality
SIO_000300: 1.1398e1

VQSLOD
type: SiteQuality
SIO_000300: -5.328000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.44e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.761493746697199e-4
allele num: 11354
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9514
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.546933976857868e-5
allele num: 64644
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16292
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6516
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.207e1

FS
type: SiteQuality
SIO_000300: 1.081e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.14e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.13e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.14e0

MQRankSum
type: SiteQuality
SIO_000300: 5.8e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.66e0

DP
type: SiteQuality
SIO_000300: 1.6549e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16288
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11344
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6516
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.19047619047619e-4
allele num: 8400
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.51e-1

FS
type: SiteQuality
SIO_000300: 9.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.82e-1

DP
type: SiteQuality
SIO_000300: 1.654338e6

QD
type: SiteQuality
SIO_000300: 1.183e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.67e-1

MQ
type: SiteQuality
SIO_000300: 5.944e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.67e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5979
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11344
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.052631578947368e-4
allele num: 9500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16288
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6516
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8400
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.654338e6

MQRankSum
type: SiteQuality
SIO_000300: -1.82e-1

QD
type: SiteQuality
SIO_000300: 1.183e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.67e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.67e0

VQSLOD
type: SiteQuality
SIO_000300: 8.51e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

MQ
type: SiteQuality
SIO_000300: 5.944e1

FS
type: SiteQuality
SIO_000300: 9.61e-1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11344
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16280
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8416
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.055743243243243e-4
allele num: 9472
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.06e-1

QD
type: SiteQuality
SIO_000300: 1.779e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.17e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.652421e6

MQRankSum
type: SiteQuality
SIO_000300: -1.194e0

VQSLOD
type: SiteQuality
SIO_000300: -1.971e0

MQ
type: SiteQuality
SIO_000300: 5.827e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.28e-1

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 276
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variant carriers: 0

GenotypeQuality
all individuals: 620
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64442
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11332
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9448
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8430
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6500
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.149305128520478e-5
allele num: 16262
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

FS
type: SiteQuality
SIO_000300: 1.252e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.028e0

MQRankSum
type: SiteQuality
SIO_000300: -1.366e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.899999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.650737e6

VQSLOD
type: SiteQuality
SIO_000300: -9.83e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.62e-1

QD
type: SiteQuality
SIO_000300: 1.027e1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64418
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11336
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9446
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.149305128520478e-5
allele num: 16262
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8430
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.31e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.223e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

FS
type: SiteQuality
SIO_000300: 1.52e0

MQRankSum
type: SiteQuality
SIO_000300: -6.12e-1

QD
type: SiteQuality
SIO_000300: 6.98e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.976e0

VQSLOD
type: SiteQuality
SIO_000300: -2.122e0

DP
type: SiteQuality
SIO_000300: 1.650867e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 57
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
all individuals: 730
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 471
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11320
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8436
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16244
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.554726368159204e-5
allele num: 64320
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9428
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.650111e6

VQSLOD
type: SiteQuality
SIO_000300: 6.68e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.71e-1

MQ
type: SiteQuality
SIO_000300: 5.924e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.16e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.04e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.02e-1

QD
type: SiteQuality
SIO_000300: 1.666e1

GenotypeQuality
all individuals: 272
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5842
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GenotypeQuality
all individuals: 1341
bin: 7.25e1
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GenotypeQuality
all individuals: 241
bin: 5.75e1
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GenotypeQuality
all individuals: 3058
bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 491
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 716
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6478
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16150
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9306
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8444
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.137254901960784e-5
allele num: 63750
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11254
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

QD
type: SiteQuality
SIO_000300: 1.549e1

MQRankSum
type: SiteQuality
SIO_000300: 1.86e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.18e0

VQSLOD
type: SiteQuality
SIO_000300: -7.83e-1

DP
type: SiteQuality
SIO_000300: 1.640324e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.69e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.3e-1

GenotypeQuality
all individuals: 24
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 380
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6478
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16146
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9298
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.880994671403197e-5
allele num: 11260
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63688
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8440
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -9.447e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.53e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.85e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.99e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

DP
type: SiteQuality
SIO_000300: 1.638585e6

QD
type: SiteQuality
SIO_000300: 1.594e1

MQ
type: SiteQuality
SIO_000300: 5.909e1

FS
type: SiteQuality
SIO_000300: 6.249e0

GenotypeQuality
all individuals: 1289
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 207
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 26

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5655
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variant carriers: 0

GenotypeQuality
all individuals: 690
bin: 8.25e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62800
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11184
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9194
num of homozygotes: 0

East Asian
type: Population
allele count: 27
allele frequency: 3.213520590335634e-3
allele num: 8402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6434
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16052
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.2e-1

QD
type: SiteQuality
SIO_000300: 1.182e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.77e-1

FS
type: SiteQuality
SIO_000300: 2.607e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.74e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.79e0

MQRankSum
type: SiteQuality
SIO_000300: 1.91e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.618862e6

GenotypeQuality
all individuals: 4783
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 374
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variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 39754
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.235191420376606e-5
allele num: 16038
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62642
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9192
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6430
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11176
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.05e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.4e0

QD
type: SiteQuality
SIO_000300: 1.143e1

VQSLOD
type: SiteQuality
SIO_000300: -1.927e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.817e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.01e-1

DP
type: SiteQuality
SIO_000300: 1.61411e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.71e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

GenotypeQuality
all individuals: 775
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 146
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 262
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GenotypeQuality
all individuals: 1255
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6414
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15986
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11140
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.605961328451211e-5
allele num: 62268
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9148
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8364
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.604329e6

ClippingRankSum
type: SiteQuality
SIO_000300: 8.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.28e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.52e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.5765e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

MQRankSum
type: SiteQuality
SIO_000300: -2.98e-1

QD
type: SiteQuality
SIO_000300: 1.471e1

VQSLOD
type: SiteQuality
SIO_000300: -2.065e0

GenotypeQuality
all individuals: 49
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1254
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 261
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GenotypeQuality
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GenotypeQuality
all individuals: 369
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GenotypeQuality
all individuals: 660
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GenotypeQuality
all individuals: 36
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GenotypeQuality
all individuals: 436
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GenotypeQuality
all individuals: 38976
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variant carriers: 0

GenotypeQuality
all individuals: 5507
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variant carriers: 0

GenotypeQuality
all individuals: 829
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8352
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.264879087833605e-5
allele num: 15962
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9128
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62056
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11114
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.86e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.360000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.59905e6

MQRankSum
type: SiteQuality
SIO_000300: -9.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -6.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

FS
type: SiteQuality
SIO_000300: 2.837e0

QD
type: SiteQuality
SIO_000300: 1.05e1

MQ
type: SiteQuality
SIO_000300: 5.954e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.44e-1

GenotypeQuality
all individuals: 1439
bin: 3.25e1
variant carriers: 0