http://identifiers.org/exac.variant/6-126080899-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126080899
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126080899
    reference: chr 6
allele count: 15
allele frequency: 1.240612697257419e-4
allele num: 120908
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135547
  ensembl protein: ENSP00000357348
  ensembl transcript: ENST00000368364
  gene symbol: HEY2
  hgvsc: ENST00000368364.3:c.965C>A
  hgvsp: ENSP00000357348.3:p.Thr322Lys
  variant of: http://identifiers.org/hgnc/4881
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135547
  ensembl protein: ENSP00000357349
  ensembl transcript: ENST00000368365
  gene symbol: HEY2
  hgvsc: ENST00000368365.1:c.827C>A
  hgvsp: ENSP00000357349.1:p.Thr276Lys
  variant of: http://identifiers.org/hgnc/4881
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16204
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29415
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1945
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11855
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1468
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7976
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1102
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 497
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48366
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 9.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Thr322Lys
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 904
  num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

6-126080905-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126080905
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126080905
    reference: chr 6
allele count: 1
allele frequency: 8.272940865018697e-6
allele num: 120876
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135547
  ensembl protein: ENSP00000357348
  ensembl transcript: ENST00000368364
  gene symbol: HEY2
  hgvsc: ENST00000368364.3:c.971A>G
  hgvsp: ENSP00000357348.3:p.Asn324Ser
  variant of: http://identifiers.org/hgnc/4881
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135547
  ensembl protein: ENSP00000357349
  ensembl transcript: ENST00000368365
  gene symbol: HEY2
  hgvsc: ENST00000368365.1:c.833A>G
  hgvsp: ENSP00000357349.1:p.Asn278Ser
  variant of: http://identifiers.org/hgnc/4881
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1946
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29395
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11857
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16176
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7972
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1468
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1107
  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 364
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48312
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asn324Ser
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 1
  allele frequency: 1.51285930408472e-4
  allele num: 6610
  num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ

http://identifiers.org/exac.variant/6-126080910-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126080910
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126080910
    reference: chr 6
allele count: 2
allele frequency: 1.658457303016734e-5
allele num: 120594
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135547
  ensembl protein: ENSP00000357348
  ensembl transcript: ENST00000368364
  gene symbol: HEY2
  hgvsc: ENST00000368364.3:c.976C>A
  hgvsp: ENSP00000357348.3:p.Pro326Thr
  variant of: http://identifiers.org/hgnc/4881
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135547
  ensembl protein: ENSP00000357349
  ensembl transcript: ENST00000368365
  gene symbol: HEY2
  hgvsc: ENST00000368365.1:c.838C>A
  hgvsp: ENSP00000357349.1:p.Pro280Thr
  variant of: http://identifiers.org/hgnc/4881
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15961
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29286
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1973
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11876
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 3.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 499
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 7927
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genotype quality: GenotypeQuality
  all individuals: 141
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genotype quality: GenotypeQuality
  all individuals: 1104
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro326Thr
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 902
  num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP

6-126080915-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126080915
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126080915
    reference: chr 6
allele count: 126
allele frequency: 1.044880087570903e-3
allele num: 120588
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135547
  ensembl protein: ENSP00000357349
  ensembl transcript: ENST00000368365
  gene symbol: HEY2
  hgvsc: ENST00000368365.1:c.843C>T
  hgvsp: ENST00000368365.1:c.843C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4881
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000135547
  ensembl protein: ENSP00000357348
  ensembl transcript: ENST00000368364
  gene symbol: HEY2
  hgvsc: ENST00000368364.3:c.981C>T
  hgvsp: ENST00000368364.3:c.981C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4881
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 11839
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 29294
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 15910
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1951
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 9.75e1
  variant carriers: 125
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1096
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 676
  bin: 2.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.75e1
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genotype quality: GenotypeQuality
  all individuals: 7923
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
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  bin: 2.75e1
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genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 492
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.75e1
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genotype quality: GenotypeQuality
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  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 143
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1454
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Tyr327Tyr
num of homozygotes: 1
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 902
  num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP

6-126080916-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126080916
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126080916
    reference: chr 6
allele count: 1
allele frequency: 8.294349888855711e-6
allele num: 120564
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000135547
  ensembl protein: ENSP00000357348
  ensembl transcript: ENST00000368364
  gene symbol: HEY2
  hgvsc: ENST00000368364.3:c.982C>T
  hgvsp: ENSP00000357348.3:p.Arg328Ter
  variant of: http://identifiers.org/hgnc/4881
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000135547
  ensembl protein: ENSP00000357349
  ensembl transcript: ENST00000368365
  gene symbol: HEY2
  hgvsc: ENST00000368365.1:c.844C>T
  hgvsp: ENSP00000357349.1:p.Arg282Ter
  variant of: http://identifiers.org/hgnc/4881
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11862
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1956
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29343
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15923
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48072
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 699
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1102
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7936
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1459
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg328Ter
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6608
  num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD

6-126080917-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126080917
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126080917
    reference: chr 6
allele count: 1
allele frequency: 8.300683976359652e-6
allele num: 120472
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135547
  ensembl protein: ENSP00000357348
  ensembl transcript: ENST00000368364
  gene symbol: HEY2
  hgvsc: ENST00000368364.3:c.983G>A
  hgvsp: ENSP00000357348.3:p.Arg328Gln
  variant of: http://identifiers.org/hgnc/4881
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135547
  ensembl protein: ENSP00000357349
  ensembl transcript: ENST00000368365
  gene symbol: HEY2
  hgvsc: ENST00000368365.1:c.845G>A
  hgvsp: ENSP00000357349.1:p.Arg282Gln
  variant of: http://identifiers.org/hgnc/4881
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11849
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1954
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29316
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 486
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1104
  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 47876
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 493
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7920
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 70
  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 145
  bin: 9.25e1
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genotype quality: GenotypeQuality
  all individuals: 332
  bin: 9.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg328Gln
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6606
  num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum

6-126080921-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126080921
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126080921
    reference: chr 6
allele count: 10
allele frequency: 8.302613662781044e-5
allele num: 120444
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135547
  ensembl protein: ENSP00000357349
  ensembl transcript: ENST00000368365
  gene symbol: HEY2
  hgvsc: ENST00000368365.1:c.849C>T
  hgvsp: ENST00000368365.1:c.849C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4881
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000135547
  ensembl protein: ENSP00000357348
  ensembl transcript: ENST00000368364
  gene symbol: HEY2
  hgvsc: ENST00000368364.3:c.987C>T
  hgvsp: ENST00000368364.3:c.987C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4881
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15837
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11835
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29320
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 830
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 1455
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 7921
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 84
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 495
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1106
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genotype quality: GenotypeQuality
  all individuals: 145
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47910
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro329Pro
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8632
  num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: QD

6-126080928-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126080928
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126080928
    reference: chr 6
allele count: 2
allele frequency: 1.66472448809722e-5
allele num: 120140
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135547
  ensembl protein: ENSP00000357348
  ensembl transcript: ENST00000368364
  gene symbol: HEY2
  hgvsc: ENST00000368364.3:c.994A>T
  hgvsp: ENSP00000357348.3:p.Thr332Ser
  variant of: http://identifiers.org/hgnc/4881
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135547
  ensembl protein: ENSP00000357349
  ensembl transcript: ENST00000368365
  gene symbol: HEY2
  hgvsc: ENST00000368365.1:c.856A>T
  hgvsp: ENSP00000357349.1:p.Thr286Ser
  variant of: http://identifiers.org/hgnc/4881
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29200
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15579
  bin: 2.25e1
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genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
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genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 144
  bin: 9.25e1
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genotype quality: GenotypeQuality
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  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1453
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 497
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1102
  bin: 7.75e1
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genotype quality: GenotypeQuality
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  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 9
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genotype quality: GenotypeQuality
  all individuals: 47528
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genotype quality: GenotypeQuality
  all individuals: 136
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genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.75e1
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genotype quality: GenotypeQuality
  all individuals: 24
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1168
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr332Ser
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 900
  num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: QD

6-126080960-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126080960
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126080960
    reference: chr 6
allele count: 1
allele frequency: 9.041264330403964e-6
allele num: 110604
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135547
  ensembl protein: ENSP00000357349
  ensembl transcript: ENST00000368365
  gene symbol: HEY2
  hgvsc: ENST00000368365.1:c.*12A>G
  variant of: http://identifiers.org/hgnc/4881
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135547
  ensembl protein: ENSP00000357348
  ensembl transcript: ENST00000368364
  gene symbol: HEY2
  hgvsc: ENST00000368364.3:c.*12A>G
  variant of: http://identifiers.org/hgnc/4881
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1966
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11248
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10277
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23036
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
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genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4642
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2031
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 9.75e1
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genotype quality: GenotypeQuality
  all individuals: 709
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 619
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1874
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
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  bin: 9.25e1
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genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 495
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 855
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 1.648858989579211e-5
  allele num: 60648
  num of homozygotes: 0
population: East Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: QD

6-126080977-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126080977
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126080977
    reference: chr 6
allele count: 1
allele frequency: 9.556392270789932e-6
allele num: 104642
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135547
  ensembl protein: ENSP00000357349
  ensembl transcript: ENST00000368365
  gene symbol: HEY2
  hgvsc: ENST00000368365.1:c.*29C>G
  variant of: http://identifiers.org/hgnc/4881
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135547
  ensembl protein: ENSP00000357348
  ensembl transcript: ENST00000368364
  gene symbol: HEY2
  hgvsc: ENST00000368364.3:c.*29C>G
  variant of: http://identifiers.org/hgnc/4881
canonical: true
consequence: 3' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 7988
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3169
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 6402
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genotype depth: GenotypeDepth
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  bin: 2.75e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1580
  bin: 2.5e0
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7376
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1845
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 1
  allele frequency: 6.970584134950509e-5
  allele num: 14346
  num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: Latino
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD

6-126080978-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126080978
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126080978
    reference: chr 6
allele count: 2
allele frequency: 1.912301837722066e-5
allele num: 104586
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135547
  ensembl protein: ENSP00000357349
  ensembl transcript: ENST00000368365
  gene symbol: HEY2
  hgvsc: ENST00000368365.1:c.*30T>G
  variant of: http://identifiers.org/hgnc/4881
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135547
  ensembl protein: ENSP00000357348
  ensembl transcript: ENST00000368364
  gene symbol: HEY2
  hgvsc: ENST00000368364.3:c.*30T>G
  variant of: http://identifiers.org/hgnc/4881
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6442
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7949
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 14342
  num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

6-126080984-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126080984
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126080984
    reference: chr 6
allele count: 1
allele frequency: 9.850858009732648e-6
allele num: 101514
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135547
  ensembl protein: ENSP00000357349
  ensembl transcript: ENST00000368365
  gene symbol: HEY2
  hgvsc: ENST00000368365.1:c.*36T>C
  variant of: http://identifiers.org/hgnc/4881
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135547
  ensembl protein: ENSP00000357348
  ensembl transcript: ENST00000368364
  gene symbol: HEY2
  hgvsc: ENST00000368364.3:c.*36T>C
  variant of: http://identifiers.org/hgnc/4881
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7495
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9642
  num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD

6-126080987-T-TC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126080987
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126080988
    reference: chr 6
allele count: 1
allele frequency: 1.00076057803931e-5
allele num: 99924
alternate allele: TC
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135547
  ensembl protein: ENSP00000357348
  ensembl transcript: ENST00000368364
  gene symbol: HEY2
  hgvsc: ENST00000368364.3:c.*41dupC
  variant of: http://identifiers.org/hgnc/4881
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135547
  ensembl protein: ENSP00000357349
  ensembl transcript: ENST00000368365
  gene symbol: HEY2
  hgvsc: ENST00000368365.1:c.*41dupC
  variant of: http://identifiers.org/hgnc/4881
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2112
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2042
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8795
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6277
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1744
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9437
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1168
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8102
  num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

6-126080988-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126080988
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126080988
    reference: chr 6
allele count: 3
allele frequency: 3.024620410138528e-5
allele num: 99186
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135547
  ensembl protein: ENSP00000357349
  ensembl transcript: ENST00000368365
  gene symbol: HEY2
  hgvsc: ENST00000368365.1:c.*40C>T
  variant of: http://identifiers.org/hgnc/4881
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135547
  ensembl protein: ENSP00000357348
  ensembl transcript: ENST00000368364
  gene symbol: HEY2
  hgvsc: ENST00000368364.3:c.*40C>T
  variant of: http://identifiers.org/hgnc/4881
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5149
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 1.75e1
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genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
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genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 4.25e1
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genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1869
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 2.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 437
  bin: 7.25e1
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genotype quality: GenotypeQuality
  all individuals: 1937
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 2171
  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 2881
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 474
  bin: 7.75e1
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genotype quality: GenotypeQuality
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  bin: 8.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 8.25e1
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genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 604
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6431
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 1.836344939033348e-5
  allele num: 54456
  num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ

6-126080996-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126080996
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126080996
    reference: chr 6
allele count: 1
allele frequency: 1.06446393596185e-5
allele num: 93944
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135547
  ensembl protein: ENSP00000357349
  ensembl transcript: ENST00000368365
  gene symbol: HEY2
  hgvsc: ENST00000368365.1:c.*48G>A
  variant of: http://identifiers.org/hgnc/4881
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135547
  ensembl protein: ENSP00000357348
  ensembl transcript: ENST00000368364
  gene symbol: HEY2
  hgvsc: ENST00000368364.3:c.*48G>A
  variant of: http://identifiers.org/hgnc/4881
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15092
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19662
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4385
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 2834
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.75e1
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 406
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  variant carriers: 0
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8614
  num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

6-126080997-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126080997
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126080997
    reference: chr 6
allele count: 2
allele frequency: 2.155451135922749e-5
allele num: 92788
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135547
  ensembl protein: ENSP00000357349
  ensembl transcript: ENST00000368365
  gene symbol: HEY2
  hgvsc: ENST00000368365.1:c.*49A>G
  variant of: http://identifiers.org/hgnc/4881
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000135547
  ensembl protein: ENSP00000357348
  ensembl transcript: ENST00000368364
  gene symbol: HEY2
  hgvsc: ENST00000368364.3:c.*49A>G
  variant of: http://identifiers.org/hgnc/4881
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19466
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7742
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 1214
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
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genotype depth: GenotypeDepth
  all individuals: 8
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12795
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 448
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num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6352
  num of homozygotes: 0
population: Other
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

6-126136458-AAG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126136458
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126136456
    reference: chr 6
allele count: 2
allele frequency: 1.661377946869133e-5
allele num: 120382
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.-40_-39delAG
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000232131
  ensembl transcript: ENST00000429007
  gene symbol: NCOA7-AS1
  hgvsc: ENST00000429007.1:n.49+3496_49+3497delCT
  variant of: http://identifiers.org/hgnc/40954
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.-40_-39delAG
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.-40_-39delAG
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.-40_-39delAG
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.-40_-39delAG
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.98_99delAG
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-131_-130delAG
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.-40_-39delAG
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3807
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 14834
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3146
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2754
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19466
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7160
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: European (Finnish)
reference allele: AAG
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

6-126136460-GAGGGACTT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126136460
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126136452
    reference: chr 6
allele count: 1
allele frequency: 8.306613725848521e-6
allele num: 120386
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.-40_-33delAGGGACTT
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.-40_-33delAGGGACTT
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.-40_-33delAGGGACTT
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.-40_-33delAGGGACTT
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.-40_-33delAGGGACTT
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.-40_-33delAGGGACTT
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.98_105delAGGGACTT
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000232131
  ensembl transcript: ENST00000429007
  gene symbol: NCOA7-AS1
  variant of: http://identifiers.org/hgnc/40954
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14993
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11388
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2276
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1543
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11063
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6718
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3809
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 834
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3138
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: GAGGGACTT
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

6-126136463-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126136463
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126136463
    reference: chr 6
allele count: 2
allele frequency: 1.660357308892874e-5
allele num: 120456
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.-38G>A
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.-38G>A
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-129G>A
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.-38G>A
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.-38G>A
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.-38G>A
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.-38G>A
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.100G>A
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000232131
  ensembl transcript: ENST00000429007
  gene symbol: NCOA7-AS1
  hgvsc: ENST00000429007.1:n.49+3493C>T
  variant of: http://identifiers.org/hgnc/40954
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1339
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11819
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3810
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6723
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15161
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2276
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11120
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7176
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13347
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 594
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

6-126136468-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126136468
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126136468
    reference: chr 6
allele count: 1
allele frequency: 8.29737802854298e-6
allele num: 120520
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.105T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.-33T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.-33T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-124T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.-33T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.-33T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.-33T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000232131
  ensembl transcript: ENST00000429007
  gene symbol: NCOA7-AS1
  hgvsc: ENST00000429007.1:n.49+3488A>G
  variant of: http://identifiers.org/hgnc/40954
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.-33T>C
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6720
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2273
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3810
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12386
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11155
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15426
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1339
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21776
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3150
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: QD

6-126136469-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126136469
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126136469
    reference: chr 6
allele count: 2
allele frequency: 1.659282857948795e-5
allele num: 120534
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-123T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.-32T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.106T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.-32T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.-32T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000232131
  ensembl transcript: ENST00000429007
  gene symbol: NCOA7-AS1
  hgvsc: ENST00000429007.1:n.49+3487A>G
  variant of: http://identifiers.org/hgnc/40954
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.-32T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.-32T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.-32T>C
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11153
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6719
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1339
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12459
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3809
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2274
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15467
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1846
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2755
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4636
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: QD

6-126136477-ACTT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126136477
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126136474
    reference: chr 6
allele count: 1
allele frequency: 8.280887711162637e-6
allele num: 120760
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.-23_-21delCTT
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000232131
  ensembl transcript: ENST00000429007
  gene symbol: NCOA7-AS1
  hgvsc: ENST00000429007.1:n.49+3476_49+3478delAAG
  variant of: http://identifiers.org/hgnc/40954
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.-23_-21delCTT
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.-23_-21delCTT
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-114_-112delCTT
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.-23_-21delCTT
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.-23_-21delCTT
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.115_117delCTT
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.-23_-21delCTT
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: 5' UTR
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 2273
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15727
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13050
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6729
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11198
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3810
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7267
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: ACTT
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum

6-126136478-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126136478
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126136478
    reference: chr 6
allele count: 1
allele frequency: 8.279105194310599e-6
allele num: 120786
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.-23C>T
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.-23C>T
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.115C>T
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.-23C>T
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000232131
  ensembl transcript: ENST00000429007
  gene symbol: NCOA7-AS1
  hgvsc: ENST00000429007.1:n.49+3478G>A
  variant of: http://identifiers.org/hgnc/40954
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.-23C>T
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.-23C>T
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-114C>T
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.-23C>T
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2273
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15760
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13057
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6732
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3811
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11239
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3861
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: FS

6-126136481-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126136481
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126136481
    reference: chr 6
allele count: 1
allele frequency: 8.273351534706709e-6
allele num: 120870
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-111T>A
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.118T>A
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.-20T>A
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.-20T>A
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.-20T>A
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.-20T>A
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.-20T>A
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000232131
  ensembl transcript: ENST00000429007
  gene symbol: NCOA7-AS1
  hgvsc: ENST00000429007.1:n.49+3475A>T
  variant of: http://identifiers.org/hgnc/40954
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.-20T>A
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15820
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11225
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13195
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3809
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2273
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6726
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23135
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff

6-126136484-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126136484
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126136484
    reference: chr 6
allele count: 1
allele frequency: 8.268699664290793e-6
allele num: 120938
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.121A>T
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.-17A>T
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.-17A>T
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.-17A>T
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.-17A>T
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.-17A>T
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.-17A>T
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-108A>T
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000232131
  ensembl transcript: ENST00000429007
  gene symbol: NCOA7-AS1
  hgvsc: ENST00000429007.1:n.49+3472T>A
  variant of: http://identifiers.org/hgnc/40954
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6726
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3809
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11244
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15886
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13231
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2273
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4624
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

6-126136491-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126136491
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126136491
    reference: chr 6
allele count: 2
allele frequency: 1.652346331791144e-5
allele num: 121040
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.-10A>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.-10A>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.-10A>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-101A>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.128A>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.-10A>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.-10A>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.-10A>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000232131
  ensembl transcript: ENST00000429007
  gene symbol: NCOA7-AS1
  hgvsc: ENST00000429007.1:n.49+3465T>C
  variant of: http://identifiers.org/hgnc/40954
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15963
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6728
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11264
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13295
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3809
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2274
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3868
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13348
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2755
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

6-126136501-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126136501
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126136501
    reference: chr 6
allele count: 1
allele frequency: 8.256002113536541e-6
allele num: 121124
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.1A>G
  hgvsp: ENSP00000407426.1:p.Met1?
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.1A>G
  hgvsp: ENSP00000376269.2:p.Met1?
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: start_lost
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.1A>G
  hgvsp: ENSP00000357341.3:p.Met1?
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.1A>G
  hgvsp: ENSP00000403643.1:p.Met1?
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-91A>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.1A>G
  hgvsp: ENSP00000408211.1:p.Met1?
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000232131
  ensembl transcript: ENST00000429007
  gene symbol: NCOA7-AS1
  hgvsc: ENST00000429007.1:n.49+3455T>C
  variant of: http://identifiers.org/hgnc/40954
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.1A>G
  hgvsp: ENSP00000406363.1:p.Met1?
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.138A>G
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: start lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11266
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6726
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3811
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13317
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16021
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2274
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3171
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7321
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Met1?
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP

6-126136504-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126136504
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126136504
    reference: chr 6
allele count: 1
allele frequency: 8.254639107178234e-6
allele num: 121144
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.4G>A
  hgvsp: ENSP00000403643.1:p.Asp2Asn
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.4G>A
  hgvsp: ENSP00000407426.1:p.Asp2Asn
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.141G>A
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.4G>A
  hgvsp: ENSP00000357341.3:p.Asp2Asn
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.4G>A
  hgvsp: ENSP00000406363.1:p.Asp2Asn
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-88G>A
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.4G>A
  hgvsp: ENSP00000376269.2:p.Asp2Asn
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000232131
  ensembl transcript: ENST00000429007
  gene symbol: NCOA7-AS1
  hgvsc: ENST00000429007.1:n.49+3452C>T
  variant of: http://identifiers.org/hgnc/40954
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.4G>A
  hgvsp: ENSP00000408211.1:p.Asp2Asn
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11270
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2272
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16037
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3810
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13314
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6726
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3175
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1851
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Asp2Asn
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
reference allele: G
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/6-126136509-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126136509
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126136509
    reference: chr 6
allele count: 1
allele frequency: 8.253276550790664e-6
allele num: 121164
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.9C>A
  hgvsp: ENST00000417494.1:c.9C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.9C>A
  hgvsp: ENST00000392477.2:c.9C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.146C>A
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.9C>A
  hgvsp: ENST00000453302.1:c.9C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-83C>A
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000232131
  ensembl transcript: ENST00000429007
  gene symbol: NCOA7-AS1
  hgvsc: ENST00000429007.1:n.49+3447G>T
  variant of: http://identifiers.org/hgnc/40954
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.9C>A
  hgvsp: ENST00000419660.1:c.9C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.9C>A
  hgvsp: ENST00000428318.1:c.9C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.9C>A
  hgvsp: ENST00000368357.3:c.9C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11272
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6725
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16058
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2273
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3809
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13311
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Thr3Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

6-126136510-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126136510
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126136510
    reference: chr 6
allele count: 1
allele frequency: 8.253140319891718e-6
allele num: 121166
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.10A>G
  hgvsp: ENSP00000406363.1:p.Lys4Glu
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-82A>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.10A>G
  hgvsp: ENSP00000357341.3:p.Lys4Glu
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000232131
  ensembl transcript: ENST00000429007
  gene symbol: NCOA7-AS1
  hgvsc: ENST00000429007.1:n.49+3446T>C
  variant of: http://identifiers.org/hgnc/40954
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.10A>G
  hgvsp: ENSP00000403643.1:p.Lys4Glu
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.10A>G
  hgvsp: ENSP00000376269.2:p.Lys4Glu
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.10A>G
  hgvsp: ENSP00000408211.1:p.Lys4Glu
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.10A>G
  hgvsp: ENSP00000407426.1:p.Lys4Glu
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.147A>G
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6725
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16061
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13312
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11271
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3809
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2272
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2757
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13344
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3175
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Lys4Glu
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ

6-126136521-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126136521
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126136521
    reference: chr 6
allele count: 1
allele frequency: 8.251642076773278e-6
allele num: 121188
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.21G>T
  hgvsp: ENSP00000357341.3:p.Lys7Asn
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-71G>T
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.158G>T
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.21G>T
  hgvsp: ENSP00000408211.1:p.Lys7Asn
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000232131
  ensembl transcript: ENST00000429007
  gene symbol: NCOA7-AS1
  hgvsc: ENST00000429007.1:n.49+3435C>A
  variant of: http://identifiers.org/hgnc/40954
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.21G>T
  hgvsp: ENSP00000403643.1:p.Lys7Asn
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.21G>T
  hgvsp: ENSP00000376269.2:p.Lys7Asn
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.21G>T
  hgvsp: ENSP00000407426.1:p.Lys7Asn
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.21G>T
  hgvsp: ENSP00000406363.1:p.Lys7Asn
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13297
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16081
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11266
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2272
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6726
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3810
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3175
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23542
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Lys7Asn
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/6-126136523-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126136523
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126136523
    reference: chr 6
allele count: 1
allele frequency: 8.251642076773278e-6
allele num: 121188
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.23A>C
  hgvsp: ENSP00000403643.1:p.Lys8Thr
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.23A>C
  hgvsp: ENSP00000357341.3:p.Lys8Thr
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.23A>C
  hgvsp: ENSP00000408211.1:p.Lys8Thr
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-69A>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.23A>C
  hgvsp: ENSP00000376269.2:p.Lys8Thr
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.23A>C
  hgvsp: ENSP00000407426.1:p.Lys8Thr
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.23A>C
  hgvsp: ENSP00000406363.1:p.Lys8Thr
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.160A>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000232131
  ensembl transcript: ENST00000429007
  gene symbol: NCOA7-AS1
  hgvsc: ENST00000429007.1:n.49+3433T>G
  variant of: http://identifiers.org/hgnc/40954
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6727
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3810
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13294
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2273
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11267
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16082
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7328
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1851
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Lys8Thr
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

6-126136528-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126136528
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126136528
    reference: chr 6
allele count: 220
allele frequency: 1.815241427109806e-3
allele num: 121196
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.28C>T
  hgvsp: ENSP00000408211.1:p.Arg10Trp
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.28C>T
  hgvsp: ENSP00000406363.1:p.Arg10Trp
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-64C>T
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.165C>T
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.28C>T
  hgvsp: ENSP00000376269.2:p.Arg10Trp
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.28C>T
  hgvsp: ENSP00000407426.1:p.Arg10Trp
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.28C>T
  hgvsp: ENSP00000403643.1:p.Arg10Trp
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000232131
  ensembl transcript: ENST00000429007
  gene symbol: NCOA7-AS1
  hgvsc: ENST00000429007.1:n.49+3428G>A
  variant of: http://identifiers.org/hgnc/40954
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.28C>T
  hgvsp: ENSP00000357341.3:p.Arg10Trp
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2289
  bin: 4.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1626
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 8.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 11244
  bin: 3.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 6.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 13196
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1359
  bin: 5.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 3819
  bin: 4.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 7.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 6719
  bin: 3.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 16039
  bin: 2.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 9.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 8.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 5.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 6.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3169
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg10Trp
num of homozygotes: 5
population: East Asian
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

6-126136529-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126136529
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126136529
    reference: chr 6
allele count: 8
allele frequency: 6.600768989587287e-5
allele num: 121198
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.29G>A
  hgvsp: ENSP00000403643.1:p.Arg10Gln
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-63G>A
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.29G>A
  hgvsp: ENSP00000376269.2:p.Arg10Gln
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.166G>A
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.29G>A
  hgvsp: ENSP00000407426.1:p.Arg10Gln
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.29G>A
  hgvsp: ENSP00000408211.1:p.Arg10Gln
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.29G>A
  hgvsp: ENSP00000357341.3:p.Arg10Gln
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000232131
  ensembl transcript: ENST00000429007
  gene symbol: NCOA7-AS1
  hgvsc: ENST00000429007.1:n.49+3427C>T
  variant of: http://identifiers.org/hgnc/40954
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.29G>A
  hgvsp: ENSP00000406363.1:p.Arg10Gln
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16125
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6719
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13229
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3808
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11292
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2269
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 23578
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg10Gln
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/6-126136532-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126136532
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126136532
    reference: chr 6
allele count: 2
allele frequency: 1.650246711883427e-5
allele num: 121194
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000232131
  ensembl transcript: ENST00000429007
  gene symbol: NCOA7-AS1
  hgvsc: ENST00000429007.1:n.49+3424T>G
  variant of: http://identifiers.org/hgnc/40954
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-60A>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.32A>C
  hgvsp: ENSP00000376269.2:p.Lys11Thr
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.32A>C
  hgvsp: ENSP00000403643.1:p.Lys11Thr
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.32A>C
  hgvsp: ENSP00000406363.1:p.Lys11Thr
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.32A>C
  hgvsp: ENSP00000408211.1:p.Lys11Thr
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.32A>C
  hgvsp: ENSP00000357341.3:p.Lys11Thr
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.169A>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.32A>C
  hgvsp: ENSP00000407426.1:p.Lys11Thr
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3809
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11287
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2269
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16130
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6715
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13228
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3846
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Lys11Thr
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP

6-126136532-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126136532
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126136532
    reference: chr 6
allele count: 2
allele frequency: 1.650246711883427e-5
allele num: 121194
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000232131
  ensembl transcript: ENST00000429007
  gene symbol: NCOA7-AS1
  hgvsc: ENST00000429007.1:n.49+3424T>C
  variant of: http://identifiers.org/hgnc/40954
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-60A>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.169A>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.32A>G
  hgvsp: ENSP00000406363.1:p.Lys11Arg
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.32A>G
  hgvsp: ENSP00000357341.3:p.Lys11Arg
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.32A>G
  hgvsp: ENSP00000376269.2:p.Lys11Arg
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.32A>G
  hgvsp: ENSP00000408211.1:p.Lys11Arg
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.32A>G
  hgvsp: ENSP00000407426.1:p.Lys11Arg
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.32A>G
  hgvsp: ENSP00000403643.1:p.Lys11Arg
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3809
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2269
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6715
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16130
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13228
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11287
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3846
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13319
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Lys11Arg
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum

6-126136540-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126136540
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126136540
    reference: chr 6
allele count: 9
allele frequency: 7.427703684141027e-5
allele num: 121168
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000232131
  ensembl transcript: ENST00000429007
  gene symbol: NCOA7-AS1
  hgvsc: ENST00000429007.1:n.49+3416A>G
  variant of: http://identifiers.org/hgnc/40954
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.40T>C
  hgvsp: ENSP00000406363.1:p.Tyr14His
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.40T>C
  hgvsp: ENSP00000357341.3:p.Tyr14His
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.40T>C
  hgvsp: ENSP00000408211.1:p.Tyr14His
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.177T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.40T>C
  hgvsp: ENSP00000403643.1:p.Tyr14His
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-52T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.40T>C
  hgvsp: ENSP00000407426.1:p.Tyr14His
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.40T>C
  hgvsp: ENSP00000376269.2:p.Tyr14His
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3809
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13154
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6718
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2269
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11289
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16140
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Tyr14His
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum

6-126136546-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126136546
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126136546
    reference: chr 6
allele count: 2
allele frequency: 1.651227687785869e-5
allele num: 121122
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.46G>T
  hgvsp: ENSP00000407426.1:p.Ala16Ser
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.46G>T
  hgvsp: ENSP00000376269.2:p.Ala16Ser
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000232131
  ensembl transcript: ENST00000429007
  gene symbol: NCOA7-AS1
  hgvsc: ENST00000429007.1:n.49+3410C>A
  variant of: http://identifiers.org/hgnc/40954
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.46G>T
  hgvsp: ENSP00000357341.3:p.Ala16Ser
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-46G>T
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.46G>T
  hgvsp: ENSP00000406363.1:p.Ala16Ser
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.46G>T
  hgvsp: ENSP00000403643.1:p.Ala16Ser
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.183G>T
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.46G>T
  hgvsp: ENSP00000408211.1:p.Ala16Ser
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16138
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6719
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11291
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2269
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3811
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13046
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7333
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4611
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3844
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala16Ser
num of homozygotes: 0
population: Latino
population: Other
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: DP

6-126136549-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126136549
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126136549
    reference: chr 6
allele count: 4
allele frequency: 3.302946228035408e-5
allele num: 121104
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.186C>T
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-43C>T
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: splice_region_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.49C>T
  hgvsp: ENSP00000408211.1:p.Arg17Ter
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000232131
  ensembl transcript: ENST00000429007
  gene symbol: NCOA7-AS1
  hgvsc: ENST00000429007.1:n.49+3407G>A
  variant of: http://identifiers.org/hgnc/40954
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: splice_region_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.49C>T
  hgvsp: ENSP00000376269.2:p.Arg17Ter
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: splice_region_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.49C>T
  hgvsp: ENSP00000406363.1:p.Arg17Ter
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: splice_region_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.49C>T
  hgvsp: ENSP00000407426.1:p.Arg17Ter
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: stop_gained
  consequence: splice_region_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.49C>T
  hgvsp: ENSP00000357341.3:p.Arg17Ter
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: splice_region_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.49C>T
  hgvsp: ENSP00000403643.1:p.Arg17Ter
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3815
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11290
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6719
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12996
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2268
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16148
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7333
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg17Ter
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ

6-126136550-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126136550
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126136550
    reference: chr 6
allele count: 2
allele frequency: 1.651582215762701e-5
allele num: 121096
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.50G>A
  hgvsp: ENSP00000376269.2:p.Arg17Gln
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.50G>A
  hgvsp: ENSP00000406363.1:p.Arg17Gln
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.187G>A
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.50G>A
  hgvsp: ENSP00000403643.1:p.Arg17Gln
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.50G>A
  hgvsp: ENSP00000357341.3:p.Arg17Gln
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-42G>A
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.50G>A
  hgvsp: ENSP00000407426.1:p.Arg17Gln
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.50G>A
  hgvsp: ENSP00000408211.1:p.Arg17Gln
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000232131
  ensembl transcript: ENST00000429007
  gene symbol: NCOA7-AS1
  hgvsc: ENST00000429007.1:n.49+3406C>T
  variant of: http://identifiers.org/hgnc/40954
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12970
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2268
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3812
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11286
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16155
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6718
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13316
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Arg17Gln
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP

6-126136557-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126136557
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126136557
    reference: chr 6
allele count: 19
allele frequency: 1.569988431664188e-4
allele num: 121020
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.50+7A>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.50+7A>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.50+7A>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.50+7A>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.50+7A>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-42+7A>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.50+7A>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.187+7A>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000232131
  ensembl transcript: ENST00000429007
  gene symbol: NCOA7-AS1
  hgvsc: ENST00000429007.1:n.49+3399T>C
  variant of: http://identifiers.org/hgnc/40954
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2265
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 11273
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3810
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16120
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12807
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6703
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4600
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
hgvs: c.50+7A>G
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP

6-126136578-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126136578
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126136578
    reference: chr 6
allele count: 1
allele frequency: 8.285278716776033e-6
allele num: 120696
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.50+28T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.50+28T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.50+28T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-42+28T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.50+28T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.187+28T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.50+28T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.50+28T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000232131
  ensembl transcript: ENST00000429007
  gene symbol: NCOA7-AS1
  hgvsc: ENST00000429007.1:n.49+3378A>G
  variant of: http://identifiers.org/hgnc/40954
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2266
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3806
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10659
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1612
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15564
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11175
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6707
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1837
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

6-126136587-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126136587
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126136587
    reference: chr 6
allele count: 1
allele frequency: 8.29985724245543e-6
allele num: 120484
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.50+37T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.50+37T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.50+37T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-42+37T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.50+37T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000232131
  ensembl transcript: ENST00000429007
  gene symbol: NCOA7-AS1
  hgvsc: ENST00000429007.1:n.49+3369A>G
  variant of: http://identifiers.org/hgnc/40954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.187+37T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.50+37T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.50+37T>C
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14327
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4315
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10798
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8982
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6681
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1612
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3801
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2266
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6575
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1784
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 587
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3030
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1203
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQ

6-126136596-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126136596
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126136596
    reference: chr 6
allele count: 1
allele frequency: 8.321129010784183e-6
allele num: 120176
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.50+46A>T
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.50+46A>T
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.50+46A>T
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.50+46A>T
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.187+46A>T
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000232131
  ensembl transcript: ENST00000429007
  gene symbol: NCOA7-AS1
  hgvsc: ENST00000429007.1:n.49+3360T>A
  variant of: http://identifiers.org/hgnc/40954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-42+46A>T
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.50+46A>T
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.50+46A>T
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2266
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12212
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3792
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6629
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10186
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2005
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5433
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10596
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1612
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3111
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3804
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1865
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11310
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 691
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Latino
reference allele: A
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD

6-126136598-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126136598
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126136598
    reference: chr 6
allele count: 2
allele frequency: 1.665833749791771e-5
allele num: 120060
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.50+48T>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.50+48T>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-42+48T>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.50+48T>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.50+48T>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.50+48T>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.187+48T>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.50+48T>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000232131
  ensembl transcript: ENST00000429007
  gene symbol: NCOA7-AS1
  hgvsc: ENST00000429007.1:n.49+3358A>C
  variant of: http://identifiers.org/hgnc/40954
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11056
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2269
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9926
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3792
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2002
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12025
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6613
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1612
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5414
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13298
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1056
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1198
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3330
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2616
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/6-126176116-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126176116
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126176116
    reference: chr 6
allele count: 2
allele frequency: 1.919901701032907e-5
allele num: 104172
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.51-50C>A
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.51-50C>A
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.51-50C>A
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.188-50C>A
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.51-50C>A
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.51-50C>A
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.51-50C>A
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-41-19919C>A
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4543
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13423
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8546
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6012
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10477
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13448
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2103
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22118
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2122
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 869
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4742
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4159
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3687
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3775
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

http://identifiers.org/exac.variant/6-126176134-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126176134
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126176134
    reference: chr 6
allele count: 64
allele frequency: 5.995765490622248e-4
allele num: 106742
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.51-32A>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.51-32A>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-41-19901A>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.188-32A>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.51-32A>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.51-32A>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.51-32A>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.51-32A>C
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 3.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4514
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 15792
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5932
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 4.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24892
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5120
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5828
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1259
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 874
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1091
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2029
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum

6-126176135-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126176135
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126176135
    reference: chr 6
allele count: 1
allele frequency: 9.339335412892019e-6
allele num: 107074
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.51-31A>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.51-31A>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.51-31A>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.51-31A>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.51-31A>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.188-31A>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.51-31A>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-41-19900A>G
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15953
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5164
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5851
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25363
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4163
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 884
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5789
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1890
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

6-126176137-G-GT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126176137
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126176138
    reference: chr 6
allele count: 5
allele frequency: 4.648481805842212e-5
allele num: 107562
alternate allele: GT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-41-19892dupT
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.51-23dupT
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.188-23dupT
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.51-23dupT
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.51-23dupT
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.51-23dupT
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.51-23dupT
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.51-23dupT
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16150
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5296
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26128
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3533
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5677
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 869
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1227
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 964
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD

6-126176144-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126176144
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126176144
    reference: chr 6
allele count: 8
allele frequency: 7.374631268436578e-5
allele num: 108480
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-41-19891C>T
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.188-22C>T
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.51-22C>T
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.51-22C>T
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.51-22C>T
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.51-22C>T
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.51-22C>T
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.51-22C>T
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4474
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26480
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16979
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6064
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2061
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 848
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5326
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 658
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 737
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

6-126176144-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126176144
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126176143
    reference: chr 6
allele count: 6
allele frequency: 5.530973451327434e-5
allele num: 108480
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.188-14delT
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.51-14delT
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.51-14delT
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.51-14delT
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.51-14delT
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-41-19883delT
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.51-14delT
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.51-14delT
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2061
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4474
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26480
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6064
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16979
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1071
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 886
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 40848
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5326
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 848
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 658
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: CT
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff

6-126176150-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126176150
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126176150
    reference: chr 6
allele count: 1
allele frequency: 8.857395925597874e-6
allele num: 112900
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.51-16T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.51-16T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.51-16T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.51-16T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.51-16T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.188-16T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.51-16T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-41-19885T>C
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3677
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6374
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17805
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28243
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1318
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 681
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD

6-126176152-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126176152
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126176151
    reference: chr 6
allele count: 1
allele frequency: 8.782098570274352e-6
allele num: 113868
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.51-11delC
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.51-11delC
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.51-11delC
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.51-11delC
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-41-19880delC
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.51-11delC
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.188-11delC
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.51-11delC
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3271
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28937
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6409
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17907
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 899
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: TC
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

6-126176160-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126176160
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126176160
    reference: chr 6
allele count: 2
allele frequency: 1.713062098501071e-5
allele num: 116750
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.51-6T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.51-6T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.51-6T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.51-6T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.51-6T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.188-6T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.51-6T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-41-19875T>C
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30376
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2082
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6610
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18439
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6258
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.25e1
  variant carriers: 0
hgvs: c.51-6T>C
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

6-126176169-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126176169
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126176169
    reference: chr 6
allele count: 1
allele frequency: 8.444519506840061e-6
allele num: 118420
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.54G>C
  hgvsp: ENST00000417494.1:c.54G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.54G>C
  hgvsp: ENST00000428318.1:c.54G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-41-19866G>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.54G>C
  hgvsp: ENST00000392477.2:c.54G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.191G>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.54G>C
  hgvsp: ENST00000453302.1:c.54G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.54G>C
  hgvsp: ENST00000419660.1:c.54G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.54G>C
  hgvsp: ENST00000368357.3:c.54G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6758
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18801
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31010
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1043
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Leu18Leu
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: DP

6-126176173-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126176173
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126176173
    reference: chr 6
allele count: 1
allele frequency: 8.409155888931868e-6
allele num: 118918
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.58A>G
  hgvsp: ENSP00000406363.1:p.Lys20Glu
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-41-19862A>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.58A>G
  hgvsp: ENSP00000357341.3:p.Lys20Glu
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.58A>G
  hgvsp: ENSP00000403643.1:p.Lys20Glu
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.58A>G
  hgvsp: ENSP00000407426.1:p.Lys20Glu
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.195A>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.58A>G
  hgvsp: ENSP00000408211.1:p.Lys20Glu
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.58A>G
  hgvsp: ENSP00000376269.2:p.Lys20Glu
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31203
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18878
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6770
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1046
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 49307
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6406
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Lys20Glu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: African
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

6-126176185-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126176185
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126176185
    reference: chr 6
allele count: 1
allele frequency: 8.355475342992263e-6
allele num: 119682
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.70G>A
  hgvsp: ENSP00000408211.1:p.Ala24Thr
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.70G>A
  hgvsp: ENSP00000407426.1:p.Ala24Thr
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-41-19850G>A
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.207G>A
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.70G>A
  hgvsp: ENSP00000406363.1:p.Ala24Thr
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.70G>A
  hgvsp: ENSP00000403643.1:p.Ala24Thr
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.70G>A
  hgvsp: ENSP00000376269.2:p.Ala24Thr
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.70G>A
  hgvsp: ENSP00000357341.3:p.Ala24Thr
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6837
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19079
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31406
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49782
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 729
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6470
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ala24Thr
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

6-126176185-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126176185
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126176185
    reference: chr 6
allele count: 1
allele frequency: 8.355475342992263e-6
allele num: 119682
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.70G>C
  hgvsp: ENSP00000408211.1:p.Ala24Pro
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.207G>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.70G>C
  hgvsp: ENSP00000407426.1:p.Ala24Pro
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.70G>C
  hgvsp: ENSP00000403643.1:p.Ala24Pro
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.70G>C
  hgvsp: ENSP00000406363.1:p.Ala24Pro
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.70G>C
  hgvsp: ENSP00000357341.3:p.Ala24Pro
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.70G>C
  hgvsp: ENSP00000376269.2:p.Ala24Pro
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-41-19850G>C
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31406
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6837
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19079
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ala24Pro
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ

http://identifiers.org/exac.variant/6-126176193-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126176193
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126176193
    reference: chr 6
allele count: 24
allele frequency: 1.998135073930998e-4
allele num: 120112
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.78A>C
  hgvsp: ENSP00000408211.1:p.Gln26His
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-41-19842A>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.78A>C
  hgvsp: ENSP00000406363.1:p.Gln26His
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.78A>C
  hgvsp: ENSP00000357341.3:p.Gln26His
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.78A>C
  hgvsp: ENSP00000376269.2:p.Gln26His
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.78A>C
  hgvsp: ENSP00000403643.1:p.Gln26His
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.78A>C
  hgvsp: ENSP00000407426.1:p.Gln26His
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.215A>C
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31556
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19141
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6853
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 958
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6493
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gln26His
num of homozygotes: 1
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP

6-126176195-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126176195
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126176195
    reference: chr 6
allele count: 2
allele frequency: 1.663948883490299e-5
allele num: 120196
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.80A>G
  hgvsp: ENSP00000407426.1:p.Asn27Ser
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.80A>G
  hgvsp: ENSP00000357341.3:p.Asn27Ser
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.80A>G
  hgvsp: ENSP00000406363.1:p.Asn27Ser
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-41-19840A>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.80A>G
  hgvsp: ENSP00000408211.1:p.Asn27Ser
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.80A>G
  hgvsp: ENSP00000403643.1:p.Asn27Ser
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.80A>G
  hgvsp: ENSP00000376269.2:p.Asn27Ser
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.217A>G
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6862
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31599
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19159
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50101
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6502
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Asn27Ser
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: A
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: QD

6-126176205-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126176205
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126176205
    reference: chr 6
allele count: 2
allele frequency: 1.659806134643474e-5
allele num: 120496
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.90A>G
  hgvsp: ENST00000417494.1:c.90A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.227A>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.90A>G
  hgvsp: ENST00000428318.1:c.90A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-41-19830A>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.90A>G
  hgvsp: ENST00000453302.1:c.90A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.90A>G
  hgvsp: ENST00000419660.1:c.90A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.90A>G
  hgvsp: ENST00000392477.2:c.90A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.90A>G
  hgvsp: ENST00000368357.3:c.90A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6878
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31716
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19191
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 729
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1043
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr30Thr
num of homozygotes: 0
population: Other
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

6-126176215-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126176215
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126176215
    reference: chr 6
allele count: 1
allele frequency: 8.285004142502071e-6
allele num: 120700
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-41-19820G>A
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.100G>A
  hgvsp: ENSP00000406363.1:p.Val34Ile
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.100G>A
  hgvsp: ENSP00000376269.2:p.Val34Ile
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.237G>A
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.100G>A
  hgvsp: ENSP00000408211.1:p.Val34Ile
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.100G>A
  hgvsp: ENSP00000407426.1:p.Val34Ile
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.100G>A
  hgvsp: ENSP00000403643.1:p.Val34Ile
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.100G>A
  hgvsp: ENSP00000357341.3:p.Val34Ile
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6884
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19225
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31790
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 734
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Val34Ile
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD

6-126176217-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126176217
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126176217
    reference: chr 6
allele count: 1
allele frequency: 8.282533792737874e-6
allele num: 120736
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.102A>G
  hgvsp: ENST00000419660.1:c.102A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.102A>G
  hgvsp: ENST00000453302.1:c.102A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.102A>G
  hgvsp: ENST00000428318.1:c.102A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.102A>G
  hgvsp: ENST00000392477.2:c.102A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.102A>G
  hgvsp: ENST00000417494.1:c.102A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.239A>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-41-19818A>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.102A>G
  hgvsp: ENST00000368357.3:c.102A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 19226
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31803
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6886
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Val34Val
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Other
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ

6-126176218-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126176218
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126176218
    reference: chr 6
allele count: 4
allele frequency: 3.312848884398138e-5
allele num: 120742
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.103G>T
  hgvsp: ENSP00000408211.1:p.Ala35Ser
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-41-19817G>T
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.103G>T
  hgvsp: ENSP00000406363.1:p.Ala35Ser
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.103G>T
  hgvsp: ENSP00000357341.3:p.Ala35Ser
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.103G>T
  hgvsp: ENSP00000407426.1:p.Ala35Ser
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.103G>T
  hgvsp: ENSP00000376269.2:p.Ala35Ser
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.103G>T
  hgvsp: ENSP00000403643.1:p.Ala35Ser
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.240G>T
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6887
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31804
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19229
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50370
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala35Ser
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

6-126176221-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126176221
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126176221
    reference: chr 6
allele count: 1
allele frequency: 8.279379377721846e-6
allele num: 120782
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.106A>G
  hgvsp: ENSP00000403643.1:p.Thr36Ala
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.243A>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.106A>G
  hgvsp: ENSP00000408211.1:p.Thr36Ala
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.106A>G
  hgvsp: ENSP00000406363.1:p.Thr36Ala
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-41-19814A>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.106A>G
  hgvsp: ENSP00000357341.3:p.Thr36Ala
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.106A>G
  hgvsp: ENSP00000407426.1:p.Thr36Ala
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.106A>G
  hgvsp: ENSP00000376269.2:p.Thr36Ala
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19235
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31798
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6893
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 735
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6529
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50363
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr36Ala
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP

6-126176224-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126176224
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126176224
    reference: chr 6
allele count: 2
allele frequency: 1.655519502019734e-5
allele num: 120808
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.109A>G
  hgvsp: ENSP00000408211.1:p.Arg37Gly
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.109A>G
  hgvsp: ENSP00000403643.1:p.Arg37Gly
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.109A>G
  hgvsp: ENSP00000357341.3:p.Arg37Gly
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.109A>G
  hgvsp: ENSP00000376269.2:p.Arg37Gly
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.246A>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-41-19811A>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.109A>G
  hgvsp: ENSP00000406363.1:p.Arg37Gly
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.109A>G
  hgvsp: ENSP00000407426.1:p.Arg37Gly
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6891
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31798
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19240
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1042
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg37Gly
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum

6-126176228-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126176228
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126176228
    reference: chr 6
allele count: 1
allele frequency: 8.275542461808372e-6
allele num: 120838
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.113C>G
  hgvsp: ENSP00000403643.1:p.Thr38Ser
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.113C>G
  hgvsp: ENSP00000406363.1:p.Thr38Ser
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.113C>G
  hgvsp: ENSP00000376269.2:p.Thr38Ser
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.250C>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.113C>G
  hgvsp: ENSP00000407426.1:p.Thr38Ser
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.113C>G
  hgvsp: ENSP00000408211.1:p.Thr38Ser
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-41-19807C>G
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.113C>G
  hgvsp: ENSP00000357341.3:p.Thr38Ser
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19246
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31792
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6901
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 736
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50376
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Thr38Ser
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

6-126176230-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126176230
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126176230
    reference: chr 6
allele count: 1
allele frequency: 8.273762245168123e-6
allele num: 120864
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.115C>T
  hgvsp: ENSP00000408211.1:p.His39Tyr
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.115C>T
  hgvsp: ENSP00000406363.1:p.His39Tyr
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.252C>T
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.115C>T
  hgvsp: ENSP00000357341.3:p.His39Tyr
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.115C>T
  hgvsp: ENSP00000407426.1:p.His39Tyr
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.115C>T
  hgvsp: ENSP00000376269.2:p.His39Tyr
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.115C>T
  hgvsp: ENSP00000403643.1:p.His39Tyr
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-41-19805C>T
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6901
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19251
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31792
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50370
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 964
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.His39Tyr
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQRankSum

6-126176232-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126176232
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126176232
    reference: chr 6
allele count: 1
allele frequency: 8.272667107875579e-6
allele num: 120880
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.117T>C
  hgvsp: ENST00000417494.1:c.117T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.117T>C
  hgvsp: ENST00000392477.2:c.117T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.117T>C
  hgvsp: ENST00000428318.1:c.117T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-41-19803T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.117T>C
  hgvsp: ENST00000419660.1:c.117T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.254T>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.117T>C
  hgvsp: ENST00000453302.1:c.117T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.117T>C
  hgvsp: ENST00000368357.3:c.117T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19252
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31788
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6902
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6532
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
hgvs: p.His39His
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum

6-126176245-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126176245
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126176245
    reference: chr 6
allele count: 1
allele frequency: 8.265282507356101e-6
allele num: 120988
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.130G>T
  hgvsp: ENSP00000403643.1:p.Asp44Tyr
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.267G>T
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.130G>T
  hgvsp: ENSP00000357341.3:p.Asp44Tyr
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.130G>T
  hgvsp: ENSP00000406363.1:p.Asp44Tyr
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.130G>T
  hgvsp: ENSP00000376269.2:p.Asp44Tyr
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.130G>T
  hgvsp: ENSP00000407426.1:p.Asp44Tyr
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-41-19790G>T
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.130G>T
  hgvsp: ENSP00000408211.1:p.Asp44Tyr
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31785
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6907
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19276
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 737
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6538
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50377
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asp44Tyr
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: African
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/6-126176246-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126176246
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126176246
    reference: chr 6
allele count: 3
allele frequency: 2.479461791493793e-5
allele num: 120994
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.131A>C
  hgvsp: ENSP00000407426.1:p.Asp44Ala
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.131A>C
  hgvsp: ENSP00000376269.2:p.Asp44Ala
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-41-19789A>C
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.131A>C
  hgvsp: ENSP00000403643.1:p.Asp44Ala
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.131A>C
  hgvsp: ENSP00000406363.1:p.Asp44Ala
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.131A>C
  hgvsp: ENSP00000408211.1:p.Asp44Ala
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.131A>C
  hgvsp: ENSP00000357341.3:p.Asp44Ala
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.268A>C
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19268
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31784
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6908
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6539
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 961
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Asp44Ala
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
reference allele: A
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/6-126176270-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 126176270
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 126176270
    reference: chr 6
allele count: 3
allele frequency: 2.479174930583102e-5
allele num: 121008
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000357341
  ensembl transcript: ENST00000368357
  gene symbol: NCOA7
  hgvsc: ENST00000368357.3:c.155C>A
  hgvsp: ENSP00000357341.3:p.Pro52Gln
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111912
  ensembl transcript: ENST00000487635
  gene symbol: NCOA7
  hgvsc: ENST00000487635.1:n.292C>A
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000406363
  ensembl transcript: ENST00000417494
  gene symbol: NCOA7
  hgvsc: ENST00000417494.1:c.155C>A
  hgvsp: ENSP00000406363.1:p.Pro52Gln
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000408211
  ensembl transcript: ENST00000419660
  gene symbol: NCOA7
  hgvsc: ENST00000419660.1:c.155C>A
  hgvsp: ENSP00000408211.1:p.Pro52Gln
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000229634
  ensembl transcript: ENST00000229634
  gene symbol: NCOA7
  hgvsc: ENST00000229634.9:c.-41-19765C>A
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000376269
  ensembl transcript: ENST00000392477
  gene symbol: NCOA7
  hgvsc: ENST00000392477.2:c.155C>A
  hgvsp: ENSP00000376269.2:p.Pro52Gln
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000403643
  ensembl transcript: ENST00000453302
  gene symbol: NCOA7
  hgvsc: ENST00000453302.1:c.155C>A
  hgvsp: ENSP00000403643.1:p.Pro52Gln
  variant of: http://identifiers.org/hgnc/21081
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111912
  ensembl protein: ENSP00000407426
  ensembl transcript: ENST00000428318
  gene symbol: NCOA7
  hgvsc: ENST00000428318.1:c.155C>A
  hgvsp: ENSP00000407426.1:p.Pro52Gln
  variant of: http://identifiers.org/hgnc/21081
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31743
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19287
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro52Gln
num of homozygotes: 0
reference allele: C

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.646031471554557e-5
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66386
num of homozygotes: 0

African
type: Population
allele count: 13
allele frequency: 1.26189089497185e-3
allele num: 10302
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 1.641701e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.628e0

VQSLOD
type: SiteQuality
SIO_000300: 2.39e0

MQRankSum
type: SiteQuality
SIO_000300: 3.26e-1

FS
type: SiteQuality
SIO_000300: 2.383e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.63e-1

MQ
type: SiteQuality
SIO_000300: 5.95e1

QD
type: SiteQuality
SIO_000300: 1.333e1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10288
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66366
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.98e-1

QD
type: SiteQuality
SIO_000300: 1.522e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.639973e6

MQRankSum
type: SiteQuality
SIO_000300: -3.79e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.46e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.17e0

MQ
type: SiteQuality
SIO_000300: 5.958e1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66216
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.967342120794806e-4
allele num: 10166
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.11e-1

QD
type: SiteQuality
SIO_000300: 1.07e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.475e0

MQRankSum
type: SiteQuality
SIO_000300: 3.79e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.97e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 2.34e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.82e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

DP
type: SiteQuality
SIO_000300: 1.637109e6

Latino
type: Population
allele count: 6
allele frequency: 5.191209551825575e-4
allele num: 11558
num of homozygotes: 0

African
type: Population
allele count: 117
allele frequency: 1.149312377210216e-2
allele num: 10180
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.021330593993595e-5
allele num: 66196
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.97e1

VQSLOD
type: SiteQuality
SIO_000300: 4.82e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.63e-2

FS
type: SiteQuality
SIO_000300: 7.3e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.600000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.964e0

MQRankSum
type: SiteQuality
SIO_000300: 3.34e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.29e-1

QD
type: SiteQuality
SIO_000300: 1.363e1

DP
type: SiteQuality
SIO_000300: 1.640839e6

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66184
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.832841691248771e-5
allele num: 10170
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.59e0

DP
type: SiteQuality
SIO_000300: 1.635012e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.02e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.6e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.43e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.32e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.945e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 9.880000000000001e0

Latino
type: Population
allele count: 1
allele frequency: 8.652015919709292e-5
allele num: 11558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10146
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66130
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.425e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.86e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.38e0

MQ
type: SiteQuality
SIO_000300: 5.947e1

MQRankSum
type: SiteQuality
SIO_000300: 6.04e-1

DP
type: SiteQuality
SIO_000300: 1.633419e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.28e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.218e0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10142
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.210214207914801e-4
allele num: 66104
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.650519031141868e-5
allele num: 11560
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06134076857801e-5
allele num: 16498
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.239e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.25e0

MQRankSum
type: SiteQuality
SIO_000300: 2.2e-1

FS
type: SiteQuality
SIO_000300: 2.81e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.4e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

DP
type: SiteQuality
SIO_000300: 1.633096e6

QD
type: SiteQuality
SIO_000300: 1.373e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10034
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.213739531496541e-4
allele num: 16478
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65950
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.599e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -2.794e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.75e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.35e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.35e-1

DP
type: SiteQuality
SIO_000300: 1.6269e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.351e1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7782
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9088
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10706
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6418
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15124
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.41e0

MQRankSum
type: SiteQuality
SIO_000300: -4.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 7.66e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.42e-1

FS
type: SiteQuality
SIO_000300: 2.981e0

MQ
type: SiteQuality
SIO_000300: 5.952e1

DP
type: SiteQuality
SIO_000300: 1.356043e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.139999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.065e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6288
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57364
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8524
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7288
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 810
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10022
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.706e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.655e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.46e-1

DP
type: SiteQuality
SIO_000300: 1.069353e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.8e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.818e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -4.073e0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10008
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8528
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6292
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7276
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.488453219842322e-5
allele num: 57332
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.97e0

QD
type: SiteQuality
SIO_000300: 1.659e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.79e0

DP
type: SiteQuality
SIO_000300: 1.067949e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.4e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.14e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.4e-1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13960
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6194
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7044
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.797397368610252e-5
allele num: 55636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8244
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.49e0

VQSLOD
type: SiteQuality
SIO_000300: -2.066e0

MQRankSum
type: SiteQuality
SIO_000300: -5.81e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.5e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.097e0

MQ
type: SiteQuality
SIO_000300: 5.695e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-3

DP
type: SiteQuality
SIO_000300: 9.74691e5

QD
type: SiteQuality
SIO_000300: 6.98e0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54858
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13690
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6160
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6888
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.05977108944468e-4
allele num: 9436
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.8e-3

DP
type: SiteQuality
SIO_000300: 9.53062e5

VQSLOD
type: SiteQuality
SIO_000300: 4.52e0

MQRankSum
type: SiteQuality
SIO_000300: -6.07e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.4e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.158e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.12e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.14e0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9350
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8016
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 774
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.627074520013016e-4
allele num: 6146
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13622
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.465845793022574e-4
allele num: 6822
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.268e1

DP
type: SiteQuality
SIO_000300: 9.44375e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.93e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.177e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.3e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.95e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.3e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.64e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 756
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5970
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6456
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12816
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.933263735838843e-5
allele num: 51726
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7606
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.119e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.501e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.5e-3

QD
type: SiteQuality
SIO_000300: 1.199e1

MQRankSum
type: SiteQuality
SIO_000300: -9.71e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.77e0

VQSLOD
type: SiteQuality
SIO_000300: -2.6e-2

DP
type: SiteQuality
SIO_000300: 9.04451e5

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 754
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8438
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7536
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12620
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.907623773983041e-5
allele num: 51182
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 9.01487e5

VQSLOD
type: SiteQuality
SIO_000300: 6.43e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.28e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.599999999999999e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.56e-1

QD
type: SiteQuality
SIO_000300: 1.175e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.4e-1

GenotypeQuality
all individuals: 358
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 512
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.014499743767522e-5
allele num: 66346
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16076
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10310
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.43e0

MQRankSum
type: SiteQuality
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QD
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FS
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MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.3e-3

DP
type: SiteQuality
SIO_000300: 2.145455e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.038e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.06e-1

ReadPosRankSum
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SIO_000300: -1.228e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16082
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.691800736576855e-5
allele num: 10318
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66336
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.92e0

FS
type: SiteQuality
SIO_000300: 1.192e0

DP
type: SiteQuality
SIO_000300: 2.150339e6

MQ
type: SiteQuality
SIO_000300: 5.158e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.5e-1

BaseQRankSum
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SIO_000300: 1.59e0

MQRankSum
type: SiteQuality
SIO_000300: -3.51e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.2e-2

QD
type: SiteQuality
SIO_000300: 6.66e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.013228071232712e-5
allele num: 66374
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10320
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16102
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.598e0

QD
type: SiteQuality
SIO_000300: 1.211e1

DP
type: SiteQuality
SIO_000300: 2.156214e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-2

FS
type: SiteQuality
SIO_000300: 2.414e0

VQSLOD
type: SiteQuality
SIO_000300: 9.91e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.649999999999999e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.48e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16120
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505751972535084e-5
allele num: 66412
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.987e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.1e-3

FS
type: SiteQuality
SIO_000300: 1.878e0

MQRankSum
type: SiteQuality
SIO_000300: 6.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 4.57e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.409999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.1e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.031e0

DP
type: SiteQuality
SIO_000300: 2.164218e6

QD
type: SiteQuality
SIO_000300: 1.227e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16118
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.010778587342687e-5
allele num: 66428
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.75e0

MQRankSum
type: SiteQuality
SIO_000300: 2.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.24e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.28e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.165262e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.371e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503759398496241e-5
allele num: 66500
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
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VQSLOD
type: SiteQuality
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ClippingRankSum
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QD
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.174923e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-2

BaseQRankSum
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MQRankSum
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SIO_000300: -1.264e0

FS
type: SiteQuality
SIO_000300: 7.38e-1

ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66510
num of homozygotes: 0

Latino
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allele frequency: 8.655011251514626e-5
allele num: 11554
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
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QD
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InbreedingCoeff
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SIO_000300: 9.8e-3

ReadPosRankSum
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MQRankSum
type: SiteQuality
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ClippingRankSum
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DP
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -2.218e0

FS
type: SiteQuality
SIO_000300: 1.1891e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
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allele count: 1
allele frequency: 1.502765087761481e-5
allele num: 66544
num of homozygotes: 0

South Asian
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allele num: 16264
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 904
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VQSLOD
type: SiteQuality
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ClippingRankSum
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 7.34e-1

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
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QD
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.11e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66556
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6604
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Other
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allele frequency: 0.0e0
allele num: 904
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Latino
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allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

South Asian
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allele frequency: 6.13195977434388e-5
allele num: 16308
num of homozygotes: 0

East Asian
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MQRankSum
type: SiteQuality
SIO_000300: 4.49e-1

VQSLOD
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FS
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QD
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InbreedingCoeff
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SIO_000300: 1.39e-2

ReadPosRankSum
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SIO_000300: -3.67e-1

DP
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SIO_000300: 2.179951e6

MQ
type: SiteQuality
SIO_000300: 5.674e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.12e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.1e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
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allele frequency: 6.116956202593589e-5
allele num: 16348
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.50177209106746e-5
allele num: 66588
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.182382e6

BaseQRankSum
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MQRankSum
type: SiteQuality
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VQSLOD
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MQ
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FS
type: SiteQuality
SIO_000300: 0.0e0

QD
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ClippingRankSum
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SIO_000300: 5.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-2

ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 1.501321162623108e-5
allele num: 66608
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: 3.91e0

MQRankSum
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VQSLOD
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InbreedingCoeff
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FS
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MQ
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SIO_000300: 5.952e1

ReadPosRankSum
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QD
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ClippingRankSum
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SIO_000300: -4.48e-1

DP
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SIO_000300: 2.183765e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.50105073551486e-5
allele num: 66620
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.18397e6

MQ
type: SiteQuality
SIO_000300: 5.962e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.24e-2

FS
type: SiteQuality
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BaseQRankSum
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QD
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MQRankSum
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SIO_000300: -9.7e-1

ClippingRankSum
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ReadPosRankSum
type: SiteQuality
SIO_000300: 4.3e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.83e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66628
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.628345850182938e-5
allele num: 10386
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.954e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.63e-1

MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-2

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
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QD
type: SiteQuality
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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European (Non-Finnish)
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allele frequency: 1.500915558490679e-5
allele num: 66626
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VQSLOD
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MQRankSum
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DP
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InbreedingCoeff
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QD
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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FS
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MQ
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SIO_000300: 5.962e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

East Asian
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num of homozygotes: 0

Latino
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allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

European (Finnish)
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num of homozygotes: 0

Other
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African
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European (Non-Finnish)
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num of homozygotes: 0

South Asian
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num of homozygotes: 0

FS
type: SiteQuality
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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QD
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MQ
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MQRankSum
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VQSLOD
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele num: 10386
num of homozygotes: 0

South Asian
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num of homozygotes: 0

Other
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East Asian
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European (Non-Finnish)
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European (Finnish)
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Latino
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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FS
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BaseQRankSum
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DP
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MQ
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VQSLOD
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InbreedingCoeff
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
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num of homozygotes: 0

South Asian
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allele count: 209
allele frequency: 1.270207852193995e-2
allele num: 16454
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Other
type: Population
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allele frequency: 4.415011037527594e-3
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African
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allele frequency: 9.632055480639569e-5
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European (Non-Finnish)
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allele count: 6
allele frequency: 9.005493350944076e-5
allele num: 66626
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
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SIO_000300: 2.35e0

DP
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ClippingRankSum
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MQ
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BaseQRankSum
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InbreedingCoeff
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FS
type: SiteQuality
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MQRankSum
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16452
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8644
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European (Non-Finnish)
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allele count: 7
allele frequency: 1.050640890943476e-4
allele num: 66626
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.35e-1

ClippingRankSum
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DP
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QD
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MQRankSum
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VQSLOD
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SIO_000300: 1.55e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.13e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.972e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.74e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.314279102059708e-4
allele num: 8642
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66624
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16452
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
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InbreedingCoeff
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FS
type: SiteQuality
SIO_000300: 1.114e0

ReadPosRankSum
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MQ
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VQSLOD
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ClippingRankSum
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QD
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.001921229586936e-5
allele num: 66624
num of homozygotes: 0

InbreedingCoeff
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DP
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FS
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VQSLOD
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QD
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ReadPosRankSum
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ClippingRankSum
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MQ
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SIO_000300: 5.98e1

BaseQRankSum
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MQRankSum
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SIO_000300: 5.0e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.006304413089163e-5
allele num: 66620
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.539951573849879e-4
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
SIO_000300: -8.23e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

MQRankSum
type: SiteQuality
SIO_000300: -2.33e-1

FS
type: SiteQuality
SIO_000300: 1.795e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 2.184301e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.91e-1

QD
type: SiteQuality
SIO_000300: 1.544e1

VQSLOD
type: SiteQuality
SIO_000300: 1.57e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.35e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 2
allele frequency: 1.926040061633282e-4
allele num: 10384
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16436
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66588
num of homozygotes: 0

East Asian
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allele count: 0
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.969e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.9e-2

InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -2.193e-1

FS
type: SiteQuality
SIO_000300: 5.85e-1

MQ
type: SiteQuality
SIO_000300: 5.907e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.3e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.92e-1

QD
type: SiteQuality
SIO_000300: 8.75e0

DP
type: SiteQuality
SIO_000300: 2.182907e6

GenotypeQuality
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variant carriers: 4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
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allele num: 10386
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.007810153199159e-5
allele num: 66580
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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East Asian
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allele count: 0
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BaseQRankSum
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SIO_000300: 1.9e0

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.158e0

ReadPosRankSum
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DP
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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SIO_000300: 8.400000000000001e-2

QD
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MQ
type: SiteQuality
SIO_000300: 5.936e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.647526807333103e-5
allele num: 11564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502042778178322e-5
allele num: 66576
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 902
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European (Finnish)
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allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: 2.74e0

FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e-1

QD
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MQ
type: SiteQuality
SIO_000300: 5.987e1

VQSLOD
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ClippingRankSum
type: SiteQuality
SIO_000300: -4.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.84e-1

DP
type: SiteQuality
SIO_000300: 2.182405e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
type: Population
allele count: 15
allele frequency: 2.270663033605813e-3
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.508566275924256e-5
allele num: 66540
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
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Latino
type: Population
allele count: 0
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num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.108647450110865e-3
allele num: 902
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
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ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

VQSLOD
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BaseQRankSum
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MQRankSum
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SIO_000300: 2.13e-1

InbreedingCoeff
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SIO_000300: 1.0e-3

MQ
type: SiteQuality
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FS
type: SiteQuality
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QD
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.162790697674419e-4
allele num: 8600
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66366
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.93e0

QD
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FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
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SIO_000300: 4.67e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.86e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.63e-1

DP
type: SiteQuality
SIO_000300: 2.154425e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.12e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66262
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.66183574879227e-5
allele num: 10350
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16272
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.3e-2

InbreedingCoeff
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FS
type: SiteQuality
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BaseQRankSum
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MQRankSum
type: SiteQuality
SIO_000300: 3.45e-1

ReadPosRankSum
type: SiteQuality
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VQSLOD
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QD
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SIO_000300: 1.704e1

DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.936e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66112
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.68429207824908e-5
allele num: 10326
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.16e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.76e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.23e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.9e-2

InbreedingCoeff
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SIO_000300: 9.4e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.23e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
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QD
type: SiteQuality
SIO_000300: 1.255e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10320
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.028009084027252e-5
allele num: 66050
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16152
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.0971e6

VQSLOD
type: SiteQuality
SIO_000300: 2.34e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.28e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.66e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.800000000000001e-3

QD
type: SiteQuality
SIO_000300: 1.522e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.52e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 766
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11886
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8806
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.425478710649813e-5
allele num: 58386
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.014e0

QD
type: SiteQuality
SIO_000300: 9.24e0

FS
type: SiteQuality
SIO_000300: 3.912e0

MQRankSum
type: SiteQuality
SIO_000300: 1.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.06e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.24e0

VQSLOD
type: SiteQuality
SIO_000300: -3.17e-1

DP
type: SiteQuality
SIO_000300: 1.246054e6

GenotypeQuality
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variant carriers: 64

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7474
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 17
allele frequency: 2.847952824499096e-4
allele num: 59692
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 45
allele frequency: 6.914566687154271e-3
allele num: 6508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10746
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 2
allele frequency: 2.518891687657431e-3
allele num: 794
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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FS
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.368512e6

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 3.61e0

QD
type: SiteQuality
SIO_000300: 1.555e1

MQRankSum
type: SiteQuality
SIO_000300: 3.21e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6510
num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8994
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.671067143477825e-5
allele num: 59842
num of homozygotes: 0

Other
type: Population
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.374993e6

FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
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SIO_000300: 1.22e0

MQ
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -8.43e-1

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.107174490699734e-4
allele num: 9032
num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7528
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 802
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.662952738883161e-5
allele num: 60134
num of homozygotes: 0

South Asian
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allele frequency: 2.354048964218456e-4
allele num: 12744
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ClippingRankSum
type: SiteQuality
SIO_000300: 8.169999999999999e-1

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
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MQ
type: SiteQuality
SIO_000300: 5.625e1

FS
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12914
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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African
type: Population
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allele frequency: 2.213858755811379e-4
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num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.871668311944718e-5
allele num: 60780
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7582
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6510
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 804
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ReadPosRankSum
type: SiteQuality
SIO_000300: -1.07e-1

BaseQRankSum
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.951e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.17e-1

GenotypeQuality
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bin: 8.25e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
all individuals: 570
bin: 4.75e1
variant carriers: 1

East Asian
type: Population
allele count: 1
allele frequency: 1.31891321551042e-4
allele num: 7582
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10856
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.10692937790569e-4
allele num: 9034
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.743534148985597e-5
allele num: 12914
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.935834155972359e-5
allele num: 60780
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.17e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.07e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.21e-1

QD
type: SiteQuality
SIO_000300: 4.35e0

DP
type: SiteQuality
SIO_000300: 1.463603e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
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SIO_000300: 3.13e0

MQRankSum
type: SiteQuality
SIO_000300: 2.41e-1

MQ
type: SiteQuality
SIO_000300: 5.951e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7892
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9288
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62960
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.973438621679828e-5
allele num: 11144
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14228
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.7e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.77e1

DP
type: SiteQuality
SIO_000300: 1.474591e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.77e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.59e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.1e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.71e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14528
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11194
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9340
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.576491360827343e-5
allele num: 63432
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7978
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

MQ
type: SiteQuality
SIO_000300: 5.928e1

DP
type: SiteQuality
SIO_000300: 1.485824e6

MQRankSum
type: SiteQuality
SIO_000300: 6.5e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.39e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.26e0

QD
type: SiteQuality
SIO_000300: 1.197e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.416e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 217
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variant carriers: 0

GenotypeQuality
all individuals: 929
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11308
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15540
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8218
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9584
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.093102381688834e-5
allele num: 64660
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

FS
type: SiteQuality
SIO_000300: 3.01e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.78e0

VQSLOD
type: SiteQuality
SIO_000300: 9.13e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.8e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.14e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.81e-1

DP
type: SiteQuality
SIO_000300: 1.518366e6

QD
type: SiteQuality
SIO_000300: 1.468e1

GenotypeQuality
all individuals: 120
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 944
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 52
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GenotypeQuality
all individuals: 1373
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65322
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11380
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.221226825930074e-5
allele num: 16074
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8378
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VQSLOD
type: SiteQuality
SIO_000300: -2.136e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -8.599999999999999e-2

MQ
type: SiteQuality
SIO_000300: 5.911e1

MQRankSum
type: SiteQuality
SIO_000300: -1.435e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.97e0

QD
type: SiteQuality
SIO_000300: 1.972e1

FS
type: SiteQuality
SIO_000300: 1.926e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.87e-1

DP
type: SiteQuality
SIO_000300: 1.537863e6

GenotypeQuality
all individuals: 113
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 145
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GenotypeQuality
all individuals: 39
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 50
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.776549060909251e-5
allele num: 11394
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8422
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9896
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BaseQRankSum
type: SiteQuality
SIO_000300: 4.71e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.23e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.0e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.54163e6

MQRankSum
type: SiteQuality
SIO_000300: 2.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.91e-1

QD
type: SiteQuality
SIO_000300: 1.436e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 139
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11428
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517865274278255e-5
allele num: 65882
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16338
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.28e-1

InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.949e1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.277e1

MQRankSum
type: SiteQuality
SIO_000300: 5.51e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.75e-1

DP
type: SiteQuality
SIO_000300: 1.550212e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.282e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16338
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.942334460131238e-5
allele num: 10058
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11428
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65882
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8488
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.282e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.28e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.75e-1

QD
type: SiteQuality
SIO_000300: 1.277e1

DP
type: SiteQuality
SIO_000300: 1.550212e6

VQSLOD
type: SiteQuality
SIO_000300: 1.61e0

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.956e0

MQ
type: SiteQuality
SIO_000300: 5.949e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
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allele num: 8542
num of homozygotes: 0

South Asian
type: Population
allele count: 24
allele frequency: 1.462522851919561e-3
allele num: 16410
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10120
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66090
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.83e-2

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
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MQ
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
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SIO_000300: 3.5e0

QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.555238e6

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 727
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 591
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 35
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16418
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.024711896191888e-5
allele num: 66122
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10140
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.62e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.63e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 6.52e-1

MQ
type: SiteQuality
SIO_000300: 5.971e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.429999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.555167e6

QD
type: SiteQuality
SIO_000300: 1.562e1

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.738828029907842e-4
allele num: 11502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10190
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16446
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66278
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.557704e6

MQRankSum
type: SiteQuality
SIO_000300: -3.49e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.99e0

FS
type: SiteQuality
SIO_000300: 3.094e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.68e0

MQ
type: SiteQuality
SIO_000300: 5.975e1

VQSLOD
type: SiteQuality
SIO_000300: 8.5e-1

QD
type: SiteQuality
SIO_000300: 1.354e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 2.94e-1

GenotypeQuality
all individuals: 359
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 965
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1042
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 50346
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10238
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.076072426783327e-5
allele num: 16458
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66380
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.34e0

MQRankSum
type: SiteQuality
SIO_000300: -3.7e-1

QD
type: SiteQuality
SIO_000300: 1.145e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.949e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.637e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.559372e6

VQSLOD
type: SiteQuality
SIO_000300: 7.11e-1

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 736
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 6526
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505978735580254e-5
allele num: 66402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10242
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.46e0

VQSLOD
type: SiteQuality
SIO_000300: -2.666e0

FS
type: SiteQuality
SIO_000300: 3.51e0

DP
type: SiteQuality
SIO_000300: 1.559748e6

QD
type: SiteQuality
SIO_000300: 1.685e1

MQRankSum
type: SiteQuality
SIO_000300: -1.345e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.595e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.54e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.965e1

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
all individuals: 21
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variant carriers: 0

GenotypeQuality
all individuals: 6526
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 30
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variant carriers: 0

GenotypeQuality
all individuals: 27
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variant carriers: 0

GenotypeQuality
all individuals: 735
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1044
bin: 9.75e1
variant carriers: 4

Latino
type: Population
allele count: 4
allele frequency: 3.475238922675934e-4
allele num: 11510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10246
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.52e0

DP
type: SiteQuality
SIO_000300: 1.560332e6

MQ
type: SiteQuality
SIO_000300: 5.977e1

VQSLOD
type: SiteQuality
SIO_000300: 3.49e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 5.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.355e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.311e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.42e0

GenotypeQuality
all individuals: 1042
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 968
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
all individuals: 139
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 29
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 27
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variant carriers: 0

GenotypeQuality
all individuals: 21
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10254
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66426
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.075334143377886e-5
allele num: 16460
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.02e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.13e0

VQSLOD
type: SiteQuality
SIO_000300: 8.96e-1

QD
type: SiteQuality
SIO_000300: 1.352e1

FS
type: SiteQuality
SIO_000300: 3.052e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e0

MQ
type: SiteQuality
SIO_000300: 5.986e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.329e0

DP
type: SiteQuality
SIO_000300: 1.560198e6

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50377
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variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
all individuals: 139
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 319
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variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 736
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 969
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10258
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.680555555555556e-5
allele num: 11520
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.161170459823502e-4
allele num: 8612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66442
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.974e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.61e0

MQRankSum
type: SiteQuality
SIO_000300: 1.74e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.406e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.36e-1

DP
type: SiteQuality
SIO_000300: 1.560511e6

VQSLOD
type: SiteQuality
SIO_000300: 1.3e-1

FS
type: SiteQuality
SIO_000300: 1.681e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.46e0

GenotypeQuality
all individuals: 6534
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 18
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GenotypeQuality
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GenotypeQuality
all individuals: 12
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GenotypeQuality
all individuals: 299
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GenotypeQuality
all individuals: 43
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66456
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10270
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160900859066636e-4
allele num: 8614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.49e0

FS
type: SiteQuality
SIO_000300: 2.261e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

VQSLOD
type: SiteQuality
SIO_000300: 5.48e-1

DP
type: SiteQuality
SIO_000300: 1.56075e6

MQRankSum
type: SiteQuality
SIO_000300: -7.34e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -7.3e-2

QD
type: SiteQuality
SIO_000300: 1.435e1

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
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variant carriers: 0

GenotypeQuality
all individuals: 27
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 25
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 112
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GenotypeQuality
all individuals: 1041
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10280
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504619180885318e-5
allele num: 66462
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.976e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.107e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.68e0

VQSLOD
type: SiteQuality
SIO_000300: 8.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 4.095e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.73e-1

QD
type: SiteQuality
SIO_000300: 1.156e1

DP
type: SiteQuality
SIO_000300: 1.560844e6

MQRankSum
type: SiteQuality
SIO_000300: 4.59e-1

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 737
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 964
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1041
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50363
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10282
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504392827055001e-5
allele num: 66472
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.411e1

FS
type: SiteQuality
SIO_000300: 8.455e0

VQSLOD
type: SiteQuality
SIO_000300: -4.982e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.09e0

MQRankSum
type: SiteQuality
SIO_000300: -1.165e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.84e0

DP
type: SiteQuality
SIO_000300: 1.560912e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.6e-1

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1043
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 961
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502945773716484e-5
allele num: 66536
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10304
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.561905e6

BaseQRankSum
type: SiteQuality
SIO_000300: -8.173999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: -1.53e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.62e0

QD
type: SiteQuality
SIO_000300: 1.211e1

FS
type: SiteQuality
SIO_000300: 3.642e0

MQRankSum
type: SiteQuality
SIO_000300: 3.33e-1

MQ
type: SiteQuality
SIO_000300: 5.955e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.705e0

GenotypeQuality
all individuals: 32
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1044
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 30
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 737
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50371
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10306
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.821272462360369e-4
allele num: 16472
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.977e1

DP
type: SiteQuality
SIO_000300: 1.562134e6

ClippingRankSum
type: SiteQuality
SIO_000300: 6.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.22e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.74e0

FS
type: SiteQuality
SIO_000300: 1.157e0

MQRankSum
type: SiteQuality
SIO_000300: -1.75e-1

QD
type: SiteQuality
SIO_000300: 1.491e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.0e-3