http://identifiers.org/exac.variant/6-125402552-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125402552
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125402552
    reference: chr 6
allele count: 4
allele frequency: 3.768039489053845e-5
allele num: 106156
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.779-30C>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.430-30C>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*583-30C>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.608-30C>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1484-30C>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.170-30C>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.416-30C>A
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3468
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6896
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1958
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25192
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11110
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5800
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2954
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1192
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3829
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 679
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5004
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 536
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7169
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff

6-125402563-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125402563
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125402563
    reference: chr 6
allele count: 1
allele frequency: 9.061746742302046e-6
allele num: 110354
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.779-19T>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*583-19T>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.416-19T>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.170-19T>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.430-19T>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1484-19T>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.608-19T>G
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7191
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33755
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2141
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5156
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5356
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 425
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4986
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 708
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1437
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1024
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2362
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

6-125402565-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125402565
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125402565
    reference: chr 6
allele count: 1
allele frequency: 9.000900090009001e-6
allele num: 111100
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.416-17T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.608-17T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.430-17T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1484-17T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.779-17T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*583-17T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.170-17T>C
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2155
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7398
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4738
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4492
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34751
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1024
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4986
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 607
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 711
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum

6-125402569-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125402569
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125402569
    reference: chr 6
allele count: 1
allele frequency: 8.852847961189115e-6
allele num: 112958
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.779-13T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.170-13T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.430-13T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.608-13T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.416-13T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1484-13T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*583-13T>C
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2302
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36515
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8192
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3847
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3020
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3935
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1147
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ClippingRankSum

http://identifiers.org/exac.variant/6-125402595-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125402595
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125402595
    reference: chr 6
allele count: 10
allele frequency: 8.415949908266146e-5
allele num: 118822
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.621C>A
  hgvsp: ENSP00000352734.2:p.Phe207Leu
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.429C>A
  hgvsp: ENSP00000275184.6:p.Phe143Leu
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.183C>A
  hgvsp: ENSP00000357399.2:p.Phe61Leu
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*596C>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1497C>A
  hgvsp: ENSP00000428698.2:p.Phe499Leu
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.792C>A
  hgvsp: ENSP00000452812.1:p.Phe264Leu
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.443C>A
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40658
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2488
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9812
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1229
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4331
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1209
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Phe207Leu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

6-125402601-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125402601
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125402601
    reference: chr 6
allele count: 10
allele frequency: 8.386869517084053e-5
allele num: 119234
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.798A>G
  hgvsp: ENST00000560949.1:c.798A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.627A>G
  hgvsp: ENST00000359704.2:c.627A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1503A>G
  hgvsp: ENST00000521654.2:c.1503A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.435A>G
  hgvsp: ENST00000275184.6:c.435A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*602A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.449A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.189A>G
  hgvsp: ENST00000368414.2:c.189A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10002
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40786
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2484
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1155
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1037
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala209Ala
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum

6-125402612-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125402612
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125402612
    reference: chr 6
allele count: 1
allele frequency: 8.360365180751095e-6
allele num: 119612
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1514T>C
  hgvsp: ENSP00000428698.2:p.Met505Thr
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.446T>C
  hgvsp: ENSP00000275184.6:p.Met149Thr
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.638T>C
  hgvsp: ENSP00000352734.2:p.Met213Thr
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.460T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*613T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.809T>C
  hgvsp: ENSP00000452812.1:p.Met270Thr
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.200T>C
  hgvsp: ENSP00000357399.2:p.Met67Thr
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10193
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40866
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2498
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1227
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45789
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1149
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 883
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Met213Thr
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: Latino
reference allele: T
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum

6-125402614-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125402614
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125402614
    reference: chr 6
allele count: 1
allele frequency: 8.358967500334358e-6
allele num: 119632
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.811G>A
  hgvsp: ENSP00000452812.1:p.Val271Ile
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.448G>A
  hgvsp: ENSP00000275184.6:p.Val150Ile
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*615G>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.640G>A
  hgvsp: ENSP00000352734.2:p.Val214Ile
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.202G>A
  hgvsp: ENSP00000357399.2:p.Val68Ile
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1516G>A
  hgvsp: ENSP00000428698.2:p.Val506Ile
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.462G>A
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40811
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2514
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10229
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4986
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1150
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Val214Ile
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

6-125402620-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125402620
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125402620
    reference: chr 6
allele count: 1
allele frequency: 8.356033892073466e-6
allele num: 119674
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.817G>T
  hgvsp: ENSP00000452812.1:p.Gly273Ter
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.208G>T
  hgvsp: ENSP00000357399.2:p.Gly70Ter
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.454G>T
  hgvsp: ENSP00000275184.6:p.Gly152Ter
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.646G>T
  hgvsp: ENSP00000352734.2:p.Gly216Ter
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1522G>T
  hgvsp: ENSP00000428698.2:p.Gly508Ter
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*621G>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.468G>T
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40676
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2529
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10329
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4431
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 873
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 749
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4985
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45700
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gly216Ter
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum

6-125402621-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125402621
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125402621
    reference: chr 6
allele count: 1
allele frequency: 8.354777261638205e-6
allele num: 119692
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.455G>T
  hgvsp: ENSP00000275184.6:p.Gly152Val
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*622G>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.818G>T
  hgvsp: ENSP00000452812.1:p.Gly273Val
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.209G>T
  hgvsp: ENSP00000357399.2:p.Gly70Val
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.469G>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1523G>T
  hgvsp: ENSP00000428698.2:p.Gly508Val
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.647G>T
  hgvsp: ENSP00000352734.2:p.Gly216Val
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10342
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40645
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2526
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 875
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4985
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 45691
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1153
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 748
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1223
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Gly216Val
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: QD

6-125402622-AT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125402622
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125402621
    reference: chr 6
allele count: 2
allele frequency: 1.67089961235129e-5
allele num: 119696
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.212delT
  hgvsp: ENSP00000357399.2:p.Leu71TrpfsTer3
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.821delT
  hgvsp: ENSP00000452812.1:p.Leu274TrpfsTer3
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.458delT
  hgvsp: ENSP00000275184.6:p.Leu153TrpfsTer3
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1526delT
  hgvsp: ENSP00000428698.2:p.Leu509TrpfsTer3
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.650delT
  hgvsp: ENSP00000352734.2:p.Leu217TrpfsTer3
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.472delT
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*625delT
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40631
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2517
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10350
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45673
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 884
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu217TrpfsTer3
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: AT
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum

6-125402627-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125402627
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125402627
    reference: chr 6
allele count: 1
allele frequency: 8.357011532675915e-6
allele num: 119660
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*628C>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.461C>T
  hgvsp: ENSP00000275184.6:p.Ala154Val
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.653C>T
  hgvsp: ENSP00000352734.2:p.Ala218Val
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.824C>T
  hgvsp: ENSP00000452812.1:p.Ala275Val
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1529C>T
  hgvsp: ENSP00000428698.2:p.Ala510Val
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.215C>T
  hgvsp: ENSP00000357399.2:p.Ala72Val
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.475C>T
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10422
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2532
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40366
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 962
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 739
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala218Val
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/6-125402628-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125402628
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125402628
    reference: chr 6
allele count: 62
allele frequency: 5.18074101308555e-4
allele num: 119674
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.476A>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1530A>C
  hgvsp: ENST00000521654.2:c.1530A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.216A>C
  hgvsp: ENST00000368414.2:c.216A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.462A>C
  hgvsp: ENST00000275184.6:c.462A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.654A>C
  hgvsp: ENST00000359704.2:c.654A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.825A>C
  hgvsp: ENST00000560949.1:c.825A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*629A>C
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 10424
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 3.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 40352
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 5.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1744
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2513
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 4.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1149
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45442
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala218Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: East Asian
population: South Asian
population: Latino
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

6-125402633-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125402633
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125402633
    reference: chr 6
allele count: 1
allele frequency: 8.364281173675934e-6
allele num: 119556
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.481G>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.830G>C
  hgvsp: ENSP00000452812.1:p.Gly277Ala
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.221G>C
  hgvsp: ENSP00000357399.2:p.Gly74Ala
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.659G>C
  hgvsp: ENSP00000352734.2:p.Gly220Ala
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1535G>C
  hgvsp: ENSP00000428698.2:p.Gly512Ala
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.467G>C
  hgvsp: ENSP00000275184.6:p.Gly156Ala
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*634G>C
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10542
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40008
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2527
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45042
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gly220Ala
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD

6-125402634-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125402634
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125402634
    reference: chr 6
allele count: 1
allele frequency: 8.364001338240215e-6
allele num: 119560
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.660G>A
  hgvsp: ENST00000359704.2:c.660G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.222G>A
  hgvsp: ENST00000368414.2:c.222G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1536G>A
  hgvsp: ENST00000521654.2:c.1536G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.482G>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*635G>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.831G>A
  hgvsp: ENST00000560949.1:c.831G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.468G>A
  hgvsp: ENST00000275184.6:c.468G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10555
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2539
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39998
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1213
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4410
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1083
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly220Gly
num of homozygotes: 0
population: Latino
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum

6-125402642-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125402642
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125402642
    reference: chr 6
allele count: 2
allele frequency: 1.678162076893386e-5
allele num: 119178
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.839C>T
  hgvsp: ENSP00000452812.1:p.Ala280Val
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.476C>T
  hgvsp: ENSP00000275184.6:p.Ala159Val
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.490C>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*643C>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.668C>T
  hgvsp: ENSP00000352734.2:p.Ala223Val
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.230C>T
  hgvsp: ENSP00000357399.2:p.Ala77Val
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1544C>T
  hgvsp: ENSP00000428698.2:p.Ala515Val
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10670
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2609
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38889
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1548
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 460
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4276
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ala223Val
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: DP
site quality: ClippingRankSum

6-125402643-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125402643
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125402643
    reference: chr 6
allele count: 141
allele frequency: 1.182925601530253e-3
allele num: 119196
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.231G>A
  hgvsp: ENST00000368414.2:c.231G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.840G>A
  hgvsp: ENST00000560949.1:c.840G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.669G>A
  hgvsp: ENST00000359704.2:c.669G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.477G>A
  hgvsp: ENST00000275184.6:c.477G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.491G>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1545G>A
  hgvsp: ENST00000521654.2:c.1545G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*644G>A
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38833
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 4.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 4.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 3.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 2572
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 10665
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1744
  bin: 9.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1180
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala223Ala
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/6-125402649-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125402649
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125402649
    reference: chr 6
allele count: 1
allele frequency: 8.404208827780952e-6
allele num: 118988
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.237A>C
  hgvsp: ENST00000368414.2:c.237A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.497A>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.483A>C
  hgvsp: ENST00000275184.6:c.483A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.846A>C
  hgvsp: ENST00000560949.1:c.846A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.675A>C
  hgvsp: ENST00000359704.2:c.675A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1551A>C
  hgvsp: ENST00000521654.2:c.1551A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*650A>C
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10607
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1667
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2533
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38383
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4981
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43563
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1173
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Val225Val
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: African
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum

6-125402652-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125402652
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125402652
    reference: chr 6
allele count: 8
allele frequency: 6.729022273063724e-5
allele num: 118888
alternate allele: T
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.486C>T
  hgvsp: ENST00000275184.6:c.486C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.849C>T
  hgvsp: ENST00000560949.1:c.849C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.500C>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  clinical significance: not_provided
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.678C>T
  hgvsp: ENST00000359704.2:c.678C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1554C>T
  hgvsp: ENST00000521654.2:c.1554C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*653C>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.240C>T
  hgvsp: ENST00000368414.2:c.240C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10565
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38107
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2561
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1843
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43297
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1090
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 9.25e1
  variant carriers: 0
hgvs: c.678C>T
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum

6-125402653-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125402653
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125402653
    reference: chr 6
allele count: 5
allele frequency: 4.207408404719029e-5
allele num: 118838
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.487G>A
  hgvsp: ENSP00000275184.6:p.Gly163Ser
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1555G>A
  hgvsp: ENSP00000428698.2:p.Gly519Ser
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.241G>A
  hgvsp: ENSP00000357399.2:p.Gly81Ser
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.850G>A
  hgvsp: ENSP00000452812.1:p.Gly284Ser
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.679G>A
  hgvsp: ENSP00000352734.2:p.Val227Ile
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.501G>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*654G>A
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1857
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10613
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2564
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38040
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 721
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Val227Ile
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD

6-125402653-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125402653
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125402653
    reference: chr 6
allele count: 2
allele frequency: 1.682963361887612e-5
allele num: 118838
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.679G>T
  hgvsp: ENSP00000352734.2:p.Val227Phe
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.241G>T
  hgvsp: ENSP00000357399.2:p.Gly81Cys
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1555G>T
  hgvsp: ENSP00000428698.2:p.Gly519Cys
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.501G>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*654G>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.850G>T
  hgvsp: ENSP00000452812.1:p.Gly284Cys
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.487G>T
  hgvsp: ENSP00000275184.6:p.Gly163Cys
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2564
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1857
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38040
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10613
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2029
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 721
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1084
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4209
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Val227Phe
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD

6-125402658-GA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125402658
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125402657
    reference: chr 6
allele count: 1
allele frequency: 8.430281571404485e-6
allele num: 118620
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.679+8delA
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.850+8delA
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*654+8delA
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.501+8delA
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.241+8delA
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1555+8delA
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.487+8delA
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37342
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2438
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10532
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2501
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 661
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2474
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 626
  bin: 2.75e1
  variant carriers: 0
hgvs: c.679+8delA
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: GA
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: ClippingRankSum

6-125402661-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125402661
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125402661
    reference: chr 6
allele count: 2
allele frequency: 1.688476150274377e-5
allele num: 118450
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*654+8A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.501+8A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.679+8A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.241+8A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1555+8A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.850+8A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.487+8A>G
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2468
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10382
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3074
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36562
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 872
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41714
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 4.75e1
  variant carriers: 0
hgvs: c.679+8A>G
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/6-125402668-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125402668
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125402668
    reference: chr 6
allele count: 4
allele frequency: 3.388566975026261e-5
allele num: 118044
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.487+15A>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*654+15A>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.679+15A>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1555+15A>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.241+15A>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.501+15A>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.850+15A>C
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1393
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2482
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10226
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4756
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34048
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 805
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 464
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3928
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQ

6-125402681-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125402681
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125402681
    reference: chr 6
allele count: 1
allele frequency: 8.51643672287515e-6
allele num: 117420
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.850+28T>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*654+28T>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.487+28T>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1555+28T>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.501+28T>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.679+28T>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.241+28T>G
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26928
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8687
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1565
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8964
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6130
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2317
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30278
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 688
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 703
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6069
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4977
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

6-125402688-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125402688
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125402688
    reference: chr 6
allele count: 119
allele frequency: 1.015670342426001e-3
allele num: 117164
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1555+35A>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*654+35A>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.501+35A>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.850+35A>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.487+35A>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.679+35A>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.241+35A>T
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 3.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 4.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1671
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22654
  bin: 2.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9647
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2243
  bin: 3.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 8105
  bin: 2.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 10212
  bin: 1.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1740
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3256
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1220
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6709
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3920
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 1
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: A
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum

6-125402696-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125402696
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125402696
    reference: chr 6
allele count: 17
allele frequency: 1.466857645779764e-4
allele num: 115894
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.241+43G>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.487+43G>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.501+43G>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*654+43G>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.679+43G>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1555+43G>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.850+43G>A
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14943
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18739
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9640
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2187
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6928
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2090
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1737
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1093
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 609
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 913
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2978
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6598
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6599
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16321
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ

6-125402701-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125402701
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125402701
    reference: chr 6
allele count: 2
allele frequency: 1.743922430330299e-5
allele num: 114684
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.241+48A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.679+48A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*654+48A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.487+48A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1555+48A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.850+48A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.501+48A>G
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9493
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2461
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1737
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2150
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6983
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14722
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18706
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5975
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 551
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6937
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 446
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11008
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1046
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3455
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 680
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: African
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQ

6-125403547-TGTGA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125403547
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125403543
    reference: chr 6
allele count: 0
allele frequency: 0.0e0
allele num: 37424
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.488-460_488-457delGAGT
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.680-45_680-42delGAGT
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.242-460_242-457delGAGT
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.502-460_502-457delGAGT
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.851-460_851-457delGAGT
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*655-460_*655-457delGAGT
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1556-460_1556-457delGAGT
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 24576
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1496
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10459
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3266
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5898
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2316
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1277
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10737
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2717
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4665
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14257
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1830
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
reference allele: TGTGA
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum

6-125403570-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125403570
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125403570
    reference: chr 6
allele count: 3
allele frequency: 7.195279896387969e-5
allele num: 41694
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.242-440A>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.680-25A>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*655-440A>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1556-440A>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.488-440A>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.851-440A>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.502-440A>T
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6616
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9277
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8451
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30643
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1184
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1808
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2323
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1439
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6214
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4232
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: VQSLOD

6-125403571-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125403571
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125403571
    reference: chr 6
allele count: 1
allele frequency: 2.372479240806643e-5
allele num: 42150
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.242-439G>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.680-24G>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*655-439G>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1556-439G>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.502-439G>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.851-439G>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.488-439G>C
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7996
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30820
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9066
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7087
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 511
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3817
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2321
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 28708
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1000
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7164
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

6-125403574-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125403574
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125403574
    reference: chr 6
allele count: 1
allele frequency: 2.267882251553499e-5
allele num: 44094
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.242-436A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1556-436A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.488-436A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.851-436A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*655-436A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.502-436A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.680-21A>G
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8582
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8439
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6682
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31364
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 847
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1606
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6094
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8118
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 744
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3620
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 947
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: South Asian
reference allele: A
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

6-125403575-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125403575
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125403575
    reference: chr 6
allele count: 1
allele frequency: 2.236836218852056e-5
allele num: 44706
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*655-435T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.488-435T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.242-435T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1556-435T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.502-435T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.851-435T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.680-20T>C
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6275
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31483
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9062
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8254
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3555
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 879
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 770
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29796
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2321
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 854
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff

6-125403585-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125403585
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125403585
    reference: chr 6
allele count: 1
allele frequency: 1.740886459385119e-5
allele num: 57442
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.680-10T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1556-425T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.242-425T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.851-425T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.502-425T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*655-425T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.488-425T>C
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2670
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5549
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28830
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17426
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1031
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2321
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28302
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16456
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2618
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: MQ
site quality: QD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD

6-125403591-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125403591
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125403591
    reference: chr 6
allele count: 25
allele frequency: 3.486555840678344e-4
allele num: 71704
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1556-419A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.680-4A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.242-419A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.502-419A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.488-419A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.851-419A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*655-419A>G
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3612
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1420
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 23069
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25740
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2541
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1480
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1612
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24127
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22895
  bin: 2.25e1
  variant carriers: 0
hgvs: c.680-4A>G
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP

6-125403600-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125403600
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125403600
    reference: chr 6
allele count: 2
allele frequency: 2.164033758926639e-5
allele num: 92420
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.488-410G>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*655-410G>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.502-410G>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1556-410G>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.242-410G>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.685G>A
  hgvsp: ENSP00000352734.2:p.Glu229Lys
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.851-410G>A
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1972
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35574
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13665
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4137
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 513
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 586
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 857
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13694
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3325
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Glu229Lys
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP

6-125403601-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125403601
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125403601
    reference: chr 6
allele count: 1
allele frequency: 1.060647843702934e-5
allele num: 94282
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.502-409A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.686A>G
  hgvsp: ENSP00000352734.2:p.Glu229Gly
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*655-409A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.242-409A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1556-409A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.488-409A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.851-409A>G
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4248
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12816
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36509
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 488
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 723
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 522
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2387
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 792
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34552
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12827
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Glu229Gly
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Other
population: Latino
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum

6-125403606-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125403606
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125403606
    reference: chr 6
allele count: 3
allele frequency: 2.95939707216983e-5
allele num: 101372
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.502-404A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.691A>G
  hgvsp: ENSP00000352734.2:p.Lys231Glu
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.242-404A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.851-404A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*655-404A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.488-404A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1556-404A>G
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4741
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39895
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9443
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37909
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1240
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 994
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9477
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 589
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Lys231Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: African
population: European (Finnish)
population: Latino
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum

6-125403617-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125403617
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125403617
    reference: chr 6
allele count: 2
allele frequency: 1.765100434214707e-5
allele num: 113308
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.702G>A
  hgvsp: ENSP00000352734.2:p.Trp234Ter
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1556-393G>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.851-393G>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*655-393G>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.502-393G>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.242-393G>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.488-393G>A
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2504
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3720
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6093
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44423
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4685
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42599
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3754
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1204
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Trp234Ter
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum

6-125403619-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125403619
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125403619
    reference: chr 6
allele count: 2
allele frequency: 1.741674794482374e-5
allele num: 114832
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1556-391A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.851-391A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.704A>G
  hgvsp: ENSP00000352734.2:p.Asn235Ser
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.502-391A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.242-391A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.488-391A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*655-391A>G
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3013
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45064
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2576
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6211
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1748
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3051
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43314
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2560
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asn235Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: Other
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

6-125403624-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125403624
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125403624
    reference: chr 6
allele count: 86
allele frequency: 7.332253389035723e-4
allele num: 117290
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*655-386A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1556-386A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.709A>G
  hgvsp: ENSP00000352734.2:p.Ile237Val
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.488-386A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.502-386A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.242-386A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.851-386A>G
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1829
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6557
  bin: 2.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2938
  bin: 3.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 5.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 3.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 4.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 45652
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 711
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1421
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43983
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2700
  bin: 9.75e1
  variant carriers: 86
genotype quality: GenotypeQuality
  all individuals: 1854
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1898
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ile237Val
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

6-125403624-A-ATAAG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125403624
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125403628
    reference: chr 6
allele count: 2
allele frequency: 1.705175206752494e-5
allele num: 117290
alternate allele: ATAAG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.488-384_488-381dupAAGT
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.242-384_242-381dupAAGT
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.502-384_502-381dupAAGT
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*655-384_*655-381dupAAGT
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.851-384_851-381dupAAGT
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1556-384_1556-381dupAAGT
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.711_714dupAAGT
  hgvsp: ENSP00000352734.2:p.Gly239LysfsTer3
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45652
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1829
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6557
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2938
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1854
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1421
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1898
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Gly239LysfsTer3
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

6-125403626-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125403626
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125403626
    reference: chr 6
allele count: 2
allele frequency: 1.696122663591031e-5
allele num: 117916
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.488-384A>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1556-384A>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.851-384A>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.242-384A>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*655-384A>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.711A>T
  hgvsp: ENST00000359704.2:c.711A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.502-384A>T
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3015
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45896
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6611
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1453
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1924
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 718
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1566
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44239
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ile237Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Other
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

6-125403628-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125403628
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125403628
    reference: chr 6
allele count: 3
allele frequency: 2.534083422026253e-5
allele num: 118386
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.242-382G>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.488-382G>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.713G>A
  hgvsp: ENSP00000352734.2:p.Ser238Asn
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1556-382G>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.851-382G>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*655-382G>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.502-382G>A
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45995
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6705
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1312
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3088
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1520
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44386
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1471
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser238Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

6-125403629-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125403629
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125403629
    reference: chr 6
allele count: 1
allele frequency: 8.435259384226064e-6
allele num: 118550
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.488-381T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.714T>C
  hgvsp: ENST00000359704.2:c.714T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.851-381T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1556-381T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.502-381T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.242-381T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*655-381T>C
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3121
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6739
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46015
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2706
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5116
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1531
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44370
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ser238Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: African
population: European (Finnish)
population: East Asian
reference allele: T
site quality: DP
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/6-125403637-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125403637
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125403637
    reference: chr 6
allele count: 1
allele frequency: 8.364421098415779e-6
allele num: 119554
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1556-373C>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.488-373C>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.851-373C>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.242-373C>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.722C>A
  hgvsp: ENSP00000352734.2:p.Thr241Asn
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*655-373C>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.502-373C>A
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46022
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3421
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6941
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 764
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2771
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2055
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr241Asn
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP

6-125403640-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125403640
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125403640
    reference: chr 6
allele count: 2
allele frequency: 1.668836153666433e-5
allele num: 119844
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.488-370G>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1556-370G>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.725G>A
  hgvsp: ENSP00000352734.2:p.Arg242Lys
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*655-370G>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.502-370G>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.242-370G>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.851-370G>A
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46020
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3478
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7016
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5299
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1634
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44581
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2090
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2790
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg242Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

6-125403645-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125403645
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125403645
    reference: chr 6
allele count: 2
allele frequency: 1.665168015452759e-5
allele num: 120108
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.488-365C>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1556-365C>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.502-365C>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.730C>G
  hgvsp: ENSP00000352734.2:p.Gln244Glu
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*655-365C>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.851-365C>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.242-365C>G
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 46038
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7053
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3562
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2134
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 831
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5337
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 506
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gln244Glu
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

6-125403666-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125403666
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125403666
    reference: chr 6
allele count: 0
allele frequency: 0.0e0
allele num: 120674
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.502-344C>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1556-344C>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.851-344C>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.488-344C>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.242-344C>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*655-344C>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.751C>T
  hgvsp: ENSP00000352734.2:p.Gln251Ter
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: stop gained
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 45995
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3690
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7169
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44665
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1714
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 691
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 859
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gln251Ter
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD

6-125403670-CTGTGT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125403670
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125403665
    reference: chr 6
allele count: 4
allele frequency: 3.313233052812935e-5
allele num: 120728
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.488-336_488-332delGTTGT
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*655-336_*655-332delGTTGT
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.502-336_502-332delGTTGT
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.242-336_242-332delGTTGT
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.759_763delGTTGT
  hgvsp: ENSP00000352734.2:p.Leu254LysfsTer2
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.851-336_851-332delGTTGT
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1556-336_1556-332delGTTGT
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3696
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7172
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45987
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5406
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1699
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1718
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Leu254LysfsTer2
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: CTGTGT
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD

6-125403685-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125403685
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125403685
    reference: chr 6
allele count: 10
allele frequency: 8.278282753025712e-5
allele num: 120798
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.488-325A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.502-325A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.851-325A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*655-325A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.770A>G
  hgvsp: ENSP00000352734.2:p.Asp257Gly
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.242-325A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1556-325A>G
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7206
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3700
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45854
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 862
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2872
  bin: 9.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44570
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asp257Gly
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum

6-125403690-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125403690
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125403690
    reference: chr 6
allele count: 1
allele frequency: 8.281573498964803e-6
allele num: 120750
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.488-320C>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.775C>T
  hgvsp: ENST00000359704.2:c.775C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1556-320C>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.502-320C>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.851-320C>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.242-320C>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*655-320C>T
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7205
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3709
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45758
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44443
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1721
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2868
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu259Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum

6-125403691-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125403691
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125403691
    reference: chr 6
allele count: 15
allele frequency: 1.242112585084712e-4
allele num: 120762
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.242-319T>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.776T>A
  hgvsp: ENSP00000352734.2:p.Leu259Gln
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.851-319T>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.502-319T>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*655-319T>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.488-319T>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1556-319T>A
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3711
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7199
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45752
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2880
  bin: 9.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44460
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu259Gln
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum

6-125403695-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125403695
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125403695
    reference: chr 6
allele count: 1
allele frequency: 8.283219853221344e-6
allele num: 120726
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.488-315C>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1556-315C>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.242-315C>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.851-315C>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*655-315C>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.780C>T
  hgvsp: ENST00000359704.2:c.780C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.502-315C>T
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3727
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45656
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7180
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2205
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44297
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1702
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Tyr260Tyr
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum

6-125403698-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125403698
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125403698
    reference: chr 6
allele count: 3
allele frequency: 2.485501242750621e-5
allele num: 120700
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.488-312C>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.783C>T
  hgvsp: ENST00000359704.2:c.783C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.502-312C>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.851-312C>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*655-312C>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.242-312C>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1556-312C>T
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3732
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7182
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45596
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5385
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 693
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1703
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Cys261Cys
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

6-125403700-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125403700
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125403700
    reference: chr 6
allele count: 18
allele frequency: 1.491819854464685e-4
allele num: 120658
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.488-310T>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1556-310T>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.785T>A
  hgvsp: ENSP00000352734.2:p.Leu262Gln
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.502-310T>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.242-310T>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.851-310T>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*655-310T>A
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3709
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7172
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45513
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 9.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1702
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2204
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu262Gln
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ClippingRankSum

6-125403700-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125403700
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125403700
    reference: chr 6
allele count: 1
allele frequency: 8.287888080359362e-6
allele num: 120658
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.851-310T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*655-310T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.242-310T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.785T>C
  hgvsp: ENSP00000352734.2:p.Leu262Pro
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.502-310T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.488-310T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1556-310T>C
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7172
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45513
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3709
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44139
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5382
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 693
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2899
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2204
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Leu262Pro
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

6-125403706-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125403706
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125403706
    reference: chr 6
allele count: 3
allele frequency: 2.488222413907504e-5
allele num: 120568
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1556-304A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.242-304A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*655-304A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.488-304A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.502-304A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.791A>G
  hgvsp: ENSP00000352734.2:p.Gln264Arg
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.851-304A>G
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3711
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7144
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45275
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 630
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 693
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1700
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5372
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2898
  bin: 9.75e1
  variant carriers: 3
hgvs: p.Gln264Arg
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

6-125403709-TGTGA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125403709
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125403705
    reference: chr 6
allele count: 2
allele frequency: 1.659503144758459e-5
allele num: 120518
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.502-298_502-295delGAGT
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.242-298_242-295delGAGT
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*655-298_*655-295delGAGT
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.851-298_851-295delGAGT
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.794+3_794+6delGAGT
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.488-298_488-295delGAGT
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1556-298_1556-295delGAGT
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45197
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7137
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3700
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2900
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 43816
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2199
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
hgvs: c.794+3_794+6delGAGT
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
reference allele: TGTGA
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: QD

6-125403719-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125403719
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125403719
    reference: chr 6
allele count: 1
allele frequency: 8.310617645103384e-6
allele num: 120328
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.488-291A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.242-291A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.851-291A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*655-291A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1556-291A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.794+10A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.502-291A>G
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44607
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3683
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7022
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 955
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 693
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1723
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 862
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

6-125403737-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125403737
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125403737
    reference: chr 6
allele count: 2
allele frequency: 1.665972511453561e-5
allele num: 120050
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.794+28G>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.502-273G>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*655-273G>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.851-273G>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.488-273G>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.242-273G>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1556-273G>A
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1945
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3670
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6795
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43153
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1121
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1687
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1367
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2186
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 827
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5275
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 693
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum

6-125403739-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125403739
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125403739
    reference: chr 6
allele count: 24
allele frequency: 2.00070024508578e-4
allele num: 119958
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.488-271C>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.242-271C>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1556-271C>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.851-271C>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*655-271C>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.794+30C>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.502-271C>T
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3679
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2013
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1279
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 42917
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 9.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 6762
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 603
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 599
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1685
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1386
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 860
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: DP

6-125403740-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125403740
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125403740
    reference: chr 6
allele count: 483
allele frequency: 4.024932917784703e-3
allele num: 120002
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.794+31T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.502-270T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*655-270T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1556-270T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.488-270T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.851-270T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.242-270T>C
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3623
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1384
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2073
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 42466
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6667
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 9.75e1
  variant carriers: 339
genotype quality: GenotypeQuality
  all individuals: 1709
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5205
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 654
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1426
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 938
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3369
  bin: 9.75e1
  variant carriers: 481
genotype quality: GenotypeQuality
  all individuals: 688
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 2
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

6-125403753-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125403753
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125403753
    reference: chr 6
allele count: 1
allele frequency: 8.366800535475235e-6
allele num: 119520
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.242-257G>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.488-257G>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.502-257G>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.794+44G>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1556-257G>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*655-257G>A
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.851-257G>A
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2104
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3595
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2182
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6371
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41772
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5152
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 693
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1001
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1152
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 522
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1305
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2179
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 692
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum

6-125403757-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125403757
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125403757
    reference: chr 6
allele count: 2
allele frequency: 1.675266367352409e-5
allele num: 119384
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*655-253A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.242-253A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.502-253A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1556-253A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.488-253A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.851-253A>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.794+48A>G
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41841
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2147
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2069
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3590
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6318
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 420
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1713
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1664
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5145
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1201
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3335
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

6-125403759-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125403759
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125403759
    reference: chr 6
allele count: 1
allele frequency: 8.384338056510439e-6
allele num: 119270
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*655-251T>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.488-251T>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1556-251T>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.851-251T>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.242-251T>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.794+50T>G
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.502-251T>G
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6334
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41828
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3594
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2061
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 694
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1162
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1141
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 654
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5148
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: DP

6-125403962-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125403962
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125403962
    reference: chr 6
allele count: 143
allele frequency: 1.457636793606785e-3
allele num: 98104
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.242-48C>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*655-48C>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.795-48C>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.502-48C>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.488-48C>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1556-48C>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.851-48C>T
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11364
  bin: 1.75e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 15906
  bin: 1.25e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6649
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 7667
  bin: 2.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2596
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9802
  bin: 7.5e0
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 9.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 782
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10645
  bin: 6.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 886
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 9.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 2368
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6117
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4028
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4319
  bin: 9.75e1
  variant carriers: 144
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1130
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

6-125403967-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125403967
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125403967
    reference: chr 6
allele count: 1
allele frequency: 1.015950421619425e-5
allele num: 98430
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.242-43A>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1556-43A>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.488-43A>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*655-43A>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.795-43A>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.851-43A>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.502-43A>T
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 9865
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2603
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9612
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6733
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15825
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9479
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1152
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4189
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 898
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 760
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 789
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6770
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4031
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1094
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2420
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
reference allele: A
site quality: FS
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

6-125403970-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125403970
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125403970
    reference: chr 6
allele count: 1
allele frequency: 1.016053647632595e-5
allele num: 98420
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.502-40C>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*655-40C>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.795-40C>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1556-40C>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.242-40C>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.488-40C>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.851-40C>T
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15615
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6822
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9879
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2622
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10739
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8539
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3990
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 672
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1041
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 943
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2409
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 888
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10577
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1054
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

6-125403993-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125403993
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125403993
    reference: chr 6
allele count: 1
allele frequency: 9.866798223976319e-6
allele num: 101350
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*655-17T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.488-17T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1556-17T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.502-17T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.795-17T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.242-17T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.851-17T>C
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9317
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2721
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7949
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21149
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10457
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3339
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2742
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2913
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 814
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 918
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3060
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 619
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: FS

6-125404001-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125404001
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125404001
    reference: chr 6
allele count: 0
allele frequency: 0.0e0
allele num: 103622
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.242-9T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1556-9T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.795-9T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.851-9T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*655-9T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.502-9T>C
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.488-9T>C
  variant of: http://identifiers.org/hgnc/21487
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2246
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7916
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8399
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25312
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8436
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 797
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 643
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 832
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9643
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 659
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2012
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff

6-125404010-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 125404010
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 125404010
    reference: chr 6
allele count: 8
allele frequency: 7.458233890214797e-5
allele num: 107264
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000352734
  ensembl transcript: ENST00000359704
  gene symbol: RNF217
  hgvsc: ENST00000359704.2:c.795G>T
  hgvsp: ENST00000359704.2:c.795G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000357399
  ensembl transcript: ENST00000368414
  gene symbol: RNF217
  hgvsc: ENST00000368414.2:c.242G>T
  hgvsp: ENSP00000357399.2:p.Gly81Val
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000428698
  ensembl transcript: ENST00000521654
  gene symbol: RNF217
  hgvsc: ENST00000521654.2:c.1556G>T
  hgvsp: ENSP00000428698.2:p.Gly519Val
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000452812
  ensembl transcript: ENST00000560949
  gene symbol: RNF217
  hgvsc: ENST00000560949.1:c.851G>T
  hgvsp: ENSP00000452812.1:p.Gly284Val
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000429012
  ensembl transcript: ENST00000519565
  gene symbol: RNF217
  hgvsc: ENST00000519565.1:c.*655G>T
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000146373
  ensembl protein: ENSP00000275184
  ensembl transcript: ENST00000275184
  gene symbol: RNF217
  hgvsc: ENST00000275184.6:c.488G>T
  hgvsp: ENSP00000275184.6:p.Gly163Val
  variant of: http://identifiers.org/hgnc/21487
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000146373
  ensembl transcript: ENST00000368415
  gene symbol: RNF217
  hgvsc: ENST00000368415.2:n.502G>T
  variant of: http://identifiers.org/hgnc/21487
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6689
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5075
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29907
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2850
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly81Val
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 453
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1313
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3201
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 939
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 460
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4989
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1069
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25670
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7516
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57350
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.895111814763506e-5
allele num: 10106
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.068394925537783e-4
allele num: 14504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6224
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.5e-1

DP
type: SiteQuality
SIO_000300: 1.490347e6

FS
type: SiteQuality
SIO_000300: 1.7228e1

MQRankSum
type: SiteQuality
SIO_000300: 2.95e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.77e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.646e0

QD
type: SiteQuality
SIO_000300: 1.002e1

VQSLOD
type: SiteQuality
SIO_000300: -2.512e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

GenotypeQuality
all individuals: 1626
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 704
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3710
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1125
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34942
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 492
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 494
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6298
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9862
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7920
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.669170422300117e-5
allele num: 59910
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15026
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -4.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.51e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.27e0

QD
type: SiteQuality
SIO_000300: 1.463e1

FS
type: SiteQuality
SIO_000300: 1.253e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.48e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

DP
type: SiteQuality
SIO_000300: 1.59735e6

GenotypeQuality
all individuals: 4987
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1256
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36293
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1131
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3749
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2035
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1438
bin: 2.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8018
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6312
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.656836105772417e-5
allele num: 60356
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15110
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.92e-1

QD
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DP
type: SiteQuality
SIO_000300: 1.612349e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 3.736e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.15e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.79e0

MQRankSum
type: SiteQuality
SIO_000300: -4.67e-1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

East Asian
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allele count: 1
allele frequency: 1.222792858889704e-4
allele num: 8178
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9984
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6342
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10726
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15340
num of homozygotes: 0

MQRankSum
type: SiteQuality
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MQ
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SIO_000300: 5.907e1

BaseQRankSum
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SIO_000300: 3.98e0

InbreedingCoeff
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SIO_000300: 9.0e-4

ReadPosRankSum
type: SiteQuality
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DP
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.468e1

FS
type: SiteQuality
SIO_000300: 1.493e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.44e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6484
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
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African
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allele frequency: 4.878048780487805e-4
allele num: 10250
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11156
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Non-Finnish)
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allele count: 5
allele frequency: 7.652514616302917e-5
allele num: 65338
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16190
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.635e0

QD
type: SiteQuality
SIO_000300: 1.21e1

VQSLOD
type: SiteQuality
SIO_000300: 1.84e0

ReadPosRankSum
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SIO_000300: 6.97e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.74e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.83e-2

DP
type: SiteQuality
SIO_000300: 1.728526e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.65e0

MQ
type: SiteQuality
SIO_000300: 5.942e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.59e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11186
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6488
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16258
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65586
num of homozygotes: 0

African
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allele count: 10
allele frequency: 9.727626459143969e-4
allele num: 10280
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.733487e6

VQSLOD
type: SiteQuality
SIO_000300: 3.47e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.01e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 4.25e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

QD
type: SiteQuality
SIO_000300: 9.550000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.86e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10280
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.518695137138171e-5
allele num: 65846
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6492
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16318
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11222
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.89e1

QD
type: SiteQuality
SIO_000300: 1.396e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -3.269e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.828e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.22e0

DP
type: SiteQuality
SIO_000300: 1.737905e6

FS
type: SiteQuality
SIO_000300: 1.973e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e0

MQRankSum
type: SiteQuality
SIO_000300: 4.17e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.912655971479501e-5
allele num: 11220
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10282
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16320
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65866
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6494
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QD
type: SiteQuality
SIO_000300: 1.224e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -3.0e-2

BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 1.738546e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.63e-1

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10280
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11222
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6498
num of homozygotes: 0

Other
type: Population
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East Asian
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allele count: 1
allele frequency: 1.168770453482936e-4
allele num: 8556
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65890
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16332
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VQSLOD
type: SiteQuality
SIO_000300: -1.582e0

FS
type: SiteQuality
SIO_000300: 2.863e0

DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.959e1

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.39e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 1
allele frequency: 9.723842862699339e-5
allele num: 10284
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11222
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8556
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6498
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65900
num of homozygotes: 0

South Asian
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num of homozygotes: 0

Other
type: Population
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InbreedingCoeff
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SIO_000300: 4.4e-3

ClippingRankSum
type: SiteQuality
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MQRankSum
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VQSLOD
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MQ
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BaseQRankSum
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ReadPosRankSum
type: SiteQuality
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FS
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DP
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 2
allele frequency: 3.034901365705614e-5
allele num: 65900
num of homozygotes: 0

African
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele num: 6500
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Other
type: Population
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FS
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ClippingRankSum
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MQRankSum
type: SiteQuality
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DP
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QD
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MQ
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InbreedingCoeff
type: SiteQuality
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VQSLOD
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
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European (Non-Finnish)
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allele count: 0
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European (Finnish)
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allele frequency: 1.537515375153752e-4
allele num: 6504
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Latino
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East Asian
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South Asian
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ReadPosRankSum
type: SiteQuality
SIO_000300: -3.82e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.95e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.25e0

VQSLOD
type: SiteQuality
SIO_000300: 8.2e-1

QD
type: SiteQuality
SIO_000300: 1.275e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.631e0

DP
type: SiteQuality
SIO_000300: 1.738633e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

GenotypeQuality
all individuals: 4412
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 960
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1207
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5040
bin: 9.75e1
variant carriers: 62

GenotypeQuality
all individuals: 324
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 735
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 46
allele frequency: 6.982816200133584e-4
allele num: 65876
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6504
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.111111111111111e-3
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.889537145079736e-4
allele num: 10284
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.168770453482936e-4
allele num: 8556
num of homozygotes: 0

South Asian
type: Population
allele count: 10
allele frequency: 6.121449559255632e-4
allele num: 16336
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11218
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.22e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.01e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

DP
type: SiteQuality
SIO_000300: 1.740357e6

FS
type: SiteQuality
SIO_000300: 1.783e0

VQSLOD
type: SiteQuality
SIO_000300: 2.27e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

QD
type: SiteQuality
SIO_000300: 1.006e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.45e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.409999999999999e-1

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1077
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4411
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 464
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1147
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1214
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4983
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 739
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10268
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.519618271890101e-5
allele num: 65806
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16314
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11222
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.777e0

MQRankSum
type: SiteQuality
SIO_000300: 1.0e-2

DP
type: SiteQuality
SIO_000300: 1.737419e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.41e-1

QD
type: SiteQuality
SIO_000300: 1.176e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.0e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.31e0

GenotypeQuality
all individuals: 205
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4983
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 167
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1147
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 464
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45138
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.914244963451596e-5
allele num: 11218
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10272
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16312
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65808
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6498
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.9e-3

QD
type: SiteQuality
SIO_000300: 1.229e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.19e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.81e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

FS
type: SiteQuality
SIO_000300: 2.432e0

DP
type: SiteQuality
SIO_000300: 1.737341e6

MQ
type: SiteQuality
SIO_000300: 5.929e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.753e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.26e-1

GenotypeQuality
all individuals: 1188
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 383
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 729
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4984
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 43852
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1112
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.049803287687944e-5
allele num: 65578
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11192
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10254
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16228
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.59e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.83e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.35e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.051e-1

QD
type: SiteQuality
SIO_000300: 8.32e0

FS
type: SiteQuality
SIO_000300: 2.143e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.730301e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.03e0

GenotypeQuality
all individuals: 43971
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5107
bin: 9.75e1
variant carriers: 141

GenotypeQuality
all individuals: 326
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1556
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 458
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4263
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 722
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1102
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8528
num of homozygotes: 0

African
type: Population
allele count: 123
allele frequency: 1.198830409356725e-2
allele num: 10260
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 7
allele frequency: 6.255585344057193e-4
allele num: 11190
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.524715640533041e-5
allele num: 65586
num of homozygotes: 0

South Asian
type: Population
allele count: 10
allele frequency: 6.159152500615915e-4
allele num: 16236
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.17e-1

QD
type: SiteQuality
SIO_000300: 1.283e1

MQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.734028e6

VQSLOD
type: SiteQuality
SIO_000300: 6.1e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.0e-2

GenotypeQuality
all individuals: 308
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 310
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1880
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 725
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1108
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 462
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4233
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8526
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.17283950617284e-5
allele num: 16200
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65462
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6490
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11170
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10244
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.722881e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.399999999999999e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.88e-1

FS
type: SiteQuality
SIO_000300: 2.307e0

VQSLOD
type: SiteQuality
SIO_000300: 4.8e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.88e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.63e-1

QD
type: SiteQuality
SIO_000300: 1.472e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.88e-1

GenotypeQuality
all individuals: 4988
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 164
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1156
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 721
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 469
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4217
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2007
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 326
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.705991352686844e-4
allele num: 16190
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.955758552749418e-5
allele num: 11166
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10232
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.529051987767584e-5
allele num: 65400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

DP
type: SiteQuality
SIO_000300: 1.720824e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.7e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.12e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.77e0

FS
type: SiteQuality
SIO_000300: 8.53e-1

QD
type: SiteQuality
SIO_000300: 9.93e0

MQRankSum
type: SiteQuality
SIO_000300: 2.62e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.82e-1

GenotypeQuality
all individuals: 522
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2029
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43381
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4209
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1084
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 462
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 326
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1153
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4984
bin: 9.75e1
variant carriers: 5

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10234
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.529566520847992e-5
allele num: 65378
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 6.167129201356768e-4
allele num: 6486
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11160
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16174
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.97e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.33e-1

FS
type: SiteQuality
SIO_000300: 5.78e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.02e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.28e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -8.54e-1

DP
type: SiteQuality
SIO_000300: 1.721076e6

QD
type: SiteQuality
SIO_000300: 1.149e1

GenotypeQuality
all individuals: 522
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 462
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4984
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1153
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 326
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 461
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 282
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43381
bin: 6.25e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6486
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11160
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16174
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10234
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.059133041695983e-5
allele num: 65378
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.78e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.02e-1

DP
type: SiteQuality
SIO_000300: 1.721076e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.54e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.28e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

QD
type: SiteQuality
SIO_000300: 1.149e1

GenotypeQuality
all individuals: 151
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 463
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
all individuals: 1070
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 3.75e1
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GenotypeQuality
all individuals: 1145
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 717
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42706
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11138
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16152
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10220
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.533036946190403e-5
allele num: 65230
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.711166e6

MQRankSum
type: SiteQuality
SIO_000300: 2.59e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.71e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.55e0

QD
type: SiteQuality
SIO_000300: 1.498e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.936e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.71e-1

GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 784
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1066
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variant carriers: 0

GenotypeQuality
all individuals: 4980
bin: 9.75e1
variant carriers: 2

African
type: Population
allele count: 2
allele frequency: 1.958096729978461e-4
allele num: 10214
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6484
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65124
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11126
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16126
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.05e0

VQSLOD
type: SiteQuality
SIO_000300: -1.297e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.6e0

FS
type: SiteQuality
SIO_000300: 1.877e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

DP
type: SiteQuality
SIO_000300: 1.701019e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.62e-1

QD
type: SiteQuality
SIO_000300: 9.23e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.600000000000001e-1

GenotypeQuality
all individuals: 1135
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1035
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 39052
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variant carriers: 0

GenotypeQuality
all individuals: 4981
bin: 9.75e1
variant carriers: 4

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8464
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.167699756375859e-5
allele num: 64854
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10186
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16072
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11100
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6478
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.54e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.82e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.7e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.677475e6

QD
type: SiteQuality
SIO_000300: 1.317e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 2632
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1084
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
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GenotypeQuality
all individuals: 3625
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 567
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GenotypeQuality
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GenotypeQuality
all individuals: 994
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2447
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variant carriers: 0

GenotypeQuality
all individuals: 693
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8412
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15994
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10144
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.551060925673161e-5
allele num: 64472
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6468
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11042
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.376e0

MQRankSum
type: SiteQuality
SIO_000300: -1.131e0

VQSLOD
type: SiteQuality
SIO_000300: -1.239e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.606756e6

QD
type: SiteQuality
SIO_000300: 6.55e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.51e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.43e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.46e-1

GenotypeQuality
all individuals: 683
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 5383
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1144
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3467
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 320
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variant carriers: 1

GenotypeQuality
all individuals: 974
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variant carriers: 0

GenotypeQuality
all individuals: 1063
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variant carriers: 1

GenotypeQuality
all individuals: 5072
bin: 9.75e1
variant carriers: 117

GenotypeQuality
all individuals: 459
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.399340755022078e-4
allele num: 64316
num of homozygotes: 0

African
type: Population
allele count: 105
allele frequency: 1.036729857819905e-2
allele num: 10128
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6468
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8398
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.540501271340356e-4
allele num: 11012
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15962
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.405e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.16e0

DP
type: SiteQuality
SIO_000300: 1.572297e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.8e-3

VQSLOD
type: SiteQuality
SIO_000300: 6.39e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.46e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.39e-1

GenotypeQuality
all individuals: 3665
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2751
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 355
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variant carriers: 0

GenotypeQuality
all individuals: 3345
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GenotypeQuality
all individuals: 6804
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variant carriers: 0

GenotypeQuality
all individuals: 1038
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variant carriers: 0

GenotypeQuality
all individuals: 319
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GenotypeQuality
all individuals: 680
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variant carriers: 0

GenotypeQuality
all individuals: 461
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variant carriers: 0

GenotypeQuality
all individuals: 4988
bin: 9.75e1
variant carriers: 17

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10042
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.581271761040865e-4
allele num: 10914
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 1.88821752265861e-4
allele num: 63552
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8288
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6428
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15798
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.53e-1

DP
type: SiteQuality
SIO_000300: 1.53665e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.51e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.77e-1

QD
type: SiteQuality
SIO_000300: 1.339e1

MQRankSum
type: SiteQuality
SIO_000300: 1.26e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 461
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2628
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5704
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GenotypeQuality
all individuals: 4975
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
all individuals: 868
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variant carriers: 0

GenotypeQuality
all individuals: 1024
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 323
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62704
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10830
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8212
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.272264631043257e-4
allele num: 15720
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6400
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9950
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.33e-1

FS
type: SiteQuality
SIO_000300: 3.854e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.56e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 7.86e-1

QD
type: SiteQuality
SIO_000300: 1.532e1

DP
type: SiteQuality
SIO_000300: 1.53439e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 973
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7682
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 3889
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GenotypeQuality
all individuals: 641
bin: 5.25e1
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GenotypeQuality
all individuals: 95
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GenotypeQuality
all individuals: 229
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GenotypeQuality
all individuals: 1284
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 405
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GenotypeQuality
all individuals: 193
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 362
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2288
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4136
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1734
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7862
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1472
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.42e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.51e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 6.32886e5

MQ
type: SiteQuality
SIO_000300: 5.065e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.22e-1

QD
type: SiteQuality
SIO_000300: 8.460000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.21e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.017e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.02e0

GenotypeQuality
all individuals: 137
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 163
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variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2152
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4522
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 1.378043178686265e-4
allele num: 21770
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1716
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8486
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.05e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.56e-2

DP
type: SiteQuality
SIO_000300: 7.38587e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.91e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.73e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.534e1

VQSLOD
type: SiteQuality
SIO_000300: 3.97e0

GenotypeQuality
all individuals: 165
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 5.75e1
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GenotypeQuality
all individuals: 6784
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 234
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GenotypeQuality
all individuals: 1321
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1737
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 674
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GenotypeQuality
all individuals: 4094
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 375
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GenotypeQuality
all individuals: 104
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 22060
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4560
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2684
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1742
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 4.591368227731864e-4
allele num: 2178
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 408
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.31e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.471e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.42e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.2e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.791e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.38e0

DP
type: SiteQuality
SIO_000300: 7.4747e5

QD
type: SiteQuality
SIO_000300: 1.292e1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3773
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GenotypeQuality
all individuals: 248
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 23138
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 418
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1852
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4752
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2840
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 4.233700254022015e-4
allele num: 2362
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8732
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.919e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.25e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.95e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.72e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.9e-2

DP
type: SiteQuality
SIO_000300: 7.73644e5

BaseQRankSum
type: SiteQuality
SIO_000300: 3.12e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.9e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 418
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2900
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 1902
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4808
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2426
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 23464
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.137915339098771e-4
allele num: 8788
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.2e-1

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.365e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.31e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.31e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.64e0

DP
type: SiteQuality
SIO_000300: 7.8212e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.18e-2

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.29077267342372e-5
allele num: 30388
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 10048
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2996
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3848
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 532
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.945e1

QD
type: SiteQuality
SIO_000300: 1.783e1

DP
type: SiteQuality
SIO_000300: 9.23817e5

FS
type: SiteQuality
SIO_000300: 1.542e0

MQRankSum
type: SiteQuality
SIO_000300: -1.924e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.245e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.57e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e0

VQSLOD
type: SiteQuality
SIO_000300: -1.105e0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4218
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 4.171881518564873e-4
allele num: 4794
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 22
allele frequency: 5.755546253662621e-4
allele num: 38224
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.775008775008775e-5
allele num: 11396
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5256
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7196
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 620
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.59e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.27e-1

QD
type: SiteQuality
SIO_000300: 1.522e1

FS
type: SiteQuality
SIO_000300: 2.236e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.26e0

VQSLOD
type: SiteQuality
SIO_000300: 2.99e0

MQRankSum
type: SiteQuality
SIO_000300: 1.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.5e-3

DP
type: SiteQuality
SIO_000300: 1.053324e6

GenotypeQuality
all individuals: 1030
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variant carriers: 0

GenotypeQuality
all individuals: 33650
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 239
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8698
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5994
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.477104874446086e-4
allele num: 13540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 748
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5766
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7856
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 49818
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.110000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.166e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.45e-1

FS
type: SiteQuality
SIO_000300: 2.157e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.485e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

DP
type: SiteQuality
SIO_000300: 1.233325e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13728
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.965177062453327e-5
allele num: 50886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6158
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8810
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5836
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 760
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8104
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.13e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.77e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.248755e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 9.3e-2

QD
type: SiteQuality
SIO_000300: 1.537e1

MQ
type: SiteQuality
SIO_000300: 5.953e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.1e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54854
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6786
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.225806451612903e-4
allele num: 9300
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6100
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9088
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.27e-1

DP
type: SiteQuality
SIO_000300: 1.310861e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.02e-1

InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 8.117000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: 9.1e-1

BaseQRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

East Asian
type: Population
allele count: 2
allele frequency: 2.511300853842291e-4
allele num: 7964
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10002
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 61772
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15698
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6402
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.82e-1

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.946e1

InbreedingCoeff
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FS
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QD
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ClippingRankSum
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SIO_000300: -3.91e-1

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62720
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6428
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10082
num of homozygotes: 0

Latino
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allele count: 0
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allele num: 10762
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.261193088661874e-4
allele num: 15858
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.34e0

FS
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
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DP
type: SiteQuality
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ClippingRankSum
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MQRankSum
type: SiteQuality
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InbreedingCoeff
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 126
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 76
allele frequency: 7.446600039192632e-3
allele num: 10206
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 7.268762493185535e-4
allele num: 11006
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.141552511415525e-3
allele num: 876
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.556274900398406e-5
allele num: 64256
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16122
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8358
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6466
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.23e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.3e-1

QD
type: SiteQuality
SIO_000300: 1.388e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.46e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.8e-2

DP
type: SiteQuality
SIO_000300: 1.464988e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.645e0

GenotypeQuality
all individuals: 711
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43983
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5021
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2700
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 126
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1468
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6466
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16122
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10206
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.112549800796813e-5
allele num: 64256
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11006
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8358
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.645e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.46e-1

QD
type: SiteQuality
SIO_000300: 1.388e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.8e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.23e0

DP
type: SiteQuality
SIO_000300: 1.464988e6

GenotypeQuality
all individuals: 1502
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 545
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5072
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2687
bin: 9.75e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64658
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11068
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6476
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.95388823759281e-4
allele num: 10236
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8414
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16182
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.966e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.06e0

DP
type: SiteQuality
SIO_000300: 1.47068e6

VQSLOD
type: SiteQuality
SIO_000300: 1.69e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.008e0

QD
type: SiteQuality
SIO_000300: 1.472e1

MQRankSum
type: SiteQuality
SIO_000300: 4.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1931
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 562
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1338
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5111
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 729
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2703
bin: 9.75e1
variant carriers: 3

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64958
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11110
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6488
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.926258291065158e-4
allele num: 10252
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16226
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8468
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.514e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.599999999999999e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.4e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.42e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.963e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.6e-2

DP
type: SiteQuality
SIO_000300: 1.476229e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 122
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1248
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1952
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1492
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 735
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.536806516059628e-5
allele num: 65070
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11124
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16236
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10264
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8476
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.478431e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.829e1

VQSLOD
type: SiteQuality
SIO_000300: -1.093e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.253e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.61e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.6e-2

GenotypeQuality
all individuals: 44533
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 634
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1602
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 795
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1605
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5255
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11224
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.117704637220115e-5
allele num: 16346
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10304
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65712
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.35e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.14e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.042e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.2e-1

MQ
type: SiteQuality
SIO_000300: 5.819e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.48e-1

FS
type: SiteQuality
SIO_000300: 3.812e0

QD
type: SiteQuality
SIO_000300: 6.28e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

DP
type: SiteQuality
SIO_000300: 1.492772e6

GenotypeQuality
all individuals: 640
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 650
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 812
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1631
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.034809262237868e-5
allele num: 65902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6516
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11248
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16372
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

MQRankSum
type: SiteQuality
SIO_000300: -8.0e-3

MQ
type: SiteQuality
SIO_000300: 5.924e1

FS
type: SiteQuality
SIO_000300: 1.254e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.067e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.24e-1

QD
type: SiteQuality
SIO_000300: 1.548e1

VQSLOD
type: SiteQuality
SIO_000300: 5.13e-1

DP
type: SiteQuality
SIO_000300: 1.496907e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.12e-1

GenotypeQuality
all individuals: 50
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2814
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 44
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1654
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 658
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44600
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1655
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11278
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66056
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21921482565228e-4
allele num: 16404
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.161e0

FS
type: SiteQuality
SIO_000300: 6.321e0

MQRankSum
type: SiteQuality
SIO_000300: -4.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.2e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.073e1

DP
type: SiteQuality
SIO_000300: 1.501025e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e0

VQSLOD
type: SiteQuality
SIO_000300: 2.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.36e-1

GenotypeQuality
all individuals: 2850
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2197
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1695
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5400
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66380
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11352
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.987e1

DP
type: SiteQuality
SIO_000300: 1.50861e6

VQSLOD
type: SiteQuality
SIO_000300: 3.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.676e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.75e0

FS
type: SiteQuality
SIO_000300: 6.547e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.059e0

MQRankSum
type: SiteQuality
SIO_000300: -5.41e-1

QD
type: SiteQuality
SIO_000300: 1.35e1

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44660
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2200
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 695
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 860
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2859
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11366
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66406
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.11358574610245e-3
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.473830477072719e-4
allele num: 8636
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.66e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.0e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.803e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.244e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.509566e6

VQSLOD
type: SiteQuality
SIO_000300: 2.63e0

QD
type: SiteQuality
SIO_000300: 1.015e1

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6600
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Latino
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 902
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European (Non-Finnish)
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allele count: 9
allele frequency: 1.35423876734178e-4
allele num: 66458
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African
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allele frequency: 0.0e0
allele num: 10378
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East Asian
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allele frequency: 1.157675387821255e-4
allele num: 8638
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QD
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MQRankSum
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BaseQRankSum
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DP
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ReadPosRankSum
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MQ
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SIO_000300: 5.969e1

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

VQSLOD
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SIO_000300: 2.07e0

ClippingRankSum
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SIO_000300: -4.31e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Latino
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66444
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 900
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
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African
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allele frequency: 0.0e0
allele num: 10378
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South Asian
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allele num: 16402
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QD
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MQ
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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DP
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SIO_000300: 1.509258e6

MQRankSum
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FS
type: SiteQuality
SIO_000300: 9.74e-1

ReadPosRankSum
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SIO_000300: 1.05e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 7.026172492534692e-4
allele num: 11386
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6604
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66452
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Other
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allele frequency: 0.0e0
allele num: 900
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East Asian
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allele frequency: 0.0e0
allele num: 8640
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African
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allele frequency: 6.745037579495086e-4
allele num: 10378
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ReadPosRankSum
type: SiteQuality
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FS
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BaseQRankSum
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QD
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VQSLOD
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DP
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MQ
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InbreedingCoeff
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SIO_000300: 5.0e-4

ClippingRankSum
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SIO_000300: -4.15e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.02e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66452
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11396
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African
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allele frequency: 9.635767970707265e-5
allele num: 10378
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 900
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South Asian
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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BaseQRankSum
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SIO_000300: -2.869e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

VQSLOD
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MQ
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DP
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QD
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FS
type: SiteQuality
SIO_000300: 2.438e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.919999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.62e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.36e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 3
allele frequency: 1.835311391166035e-4
allele num: 16346
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11390
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66448
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.576e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.49e-1

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.50973e6

BaseQRankSum
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SIO_000300: -3.314e0

MQ
type: SiteQuality
SIO_000300: 5.964e1

VQSLOD
type: SiteQuality
SIO_000300: 1.15e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.6e-2

QD
type: SiteQuality
SIO_000300: 1.045e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66436
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16302
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African
type: Population
allele count: 18
allele frequency: 1.734438234727308e-3
allele num: 10378
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11396
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
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SIO_000300: -1.055e0

MQRankSum
type: SiteQuality
SIO_000300: 4.81e-1

FS
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.28e1

MQ
type: SiteQuality
SIO_000300: 5.97e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.2e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 900
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East Asian
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African
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allele frequency: 0.0e0
allele num: 10378
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.505208019748329e-5
allele num: 66436
num of homozygotes: 0

VQSLOD
type: SiteQuality
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QD
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DP
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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MQ
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ClippingRankSum
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FS
type: SiteQuality
SIO_000300: 5.31e-1

ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.513317191283293e-4
allele num: 6608
num of homozygotes: 0

South Asian
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allele frequency: 6.153846153846154e-5
allele num: 16250
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Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506024096385542e-5
allele num: 66400
num of homozygotes: 0

DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
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InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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QD
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MQRankSum
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
type: Population
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Other
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East Asian
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European (Non-Finnish)
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South Asian
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African
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allele count: 0
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European (Finnish)
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allele count: 2
allele frequency: 3.026634382566586e-4
allele num: 6608
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.835e1

InbreedingCoeff
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FS
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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DP
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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African
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allele num: 10372
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Latino
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South Asian
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East Asian
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MQ
type: SiteQuality
SIO_000300: 5.985e1

MQRankSum
type: SiteQuality
SIO_000300: 1.51e0

QD
type: SiteQuality
SIO_000300: 1.569e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.63e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.43e-1

FS
type: SiteQuality
SIO_000300: 4.093e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.22e0

DP
type: SiteQuality
SIO_000300: 1.498893e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.09e0

GenotypeQuality
all individuals: 41438
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 521
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2902
bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 586
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1720
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 861
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15860
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.759635599159075e-5
allele num: 11416
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.652509652509652e-5
allele num: 10360
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66282
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.599999999999999e-3

DP
type: SiteQuality
SIO_000300: 1.484223e6

QD
type: SiteQuality
SIO_000300: 1.177e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.843e0

MQ
type: SiteQuality
SIO_000300: 5.901e1

MQRankSum
type: SiteQuality
SIO_000300: 1.67e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

FS
type: SiteQuality
SIO_000300: 5.778e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.97e-1

GenotypeQuality
all individuals: 693
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2925
bin: 9.75e1
variant carriers: 24

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 893
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1718
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15806
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.761170492377782e-5
allele num: 11414
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

African
type: Population
allele count: 23
allele frequency: 2.22007722007722e-3
allele num: 10360
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66248
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.971e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.93e-1

QD
type: SiteQuality
SIO_000300: 1.226e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.632e0

VQSLOD
type: SiteQuality
SIO_000300: 3.9e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.16e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.0e-3

FS
type: SiteQuality
SIO_000300: 1.164e0

DP
type: SiteQuality
SIO_000300: 1.484755e6

GenotypeQuality
all individuals: 45
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1669
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 847
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2170
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 40714
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.524933720489837e-4
allele num: 15842
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 12
allele frequency: 1.815431164901664e-3
allele num: 6610
num of homozygotes: 1

Latino
type: Population
allele count: 15
allele frequency: 1.313945339873861e-3
allele num: 11416
num of homozygotes: 0

African
type: Population
allele count: 16
allele frequency: 1.544699748986291e-3
allele num: 10358
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 430
allele frequency: 6.490370102034656e-3
allele num: 66252
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Other
type: Population
allele count: 6
allele frequency: 6.741573033707865e-3
allele num: 890
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.49e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.24e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.59e-1

DP
type: SiteQuality
SIO_000300: 1.530099e6

QD
type: SiteQuality
SIO_000300: 1.27e1

FS
type: SiteQuality
SIO_000300: 5.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.08e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.777e0

GenotypeQuality
all individuals: 98
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 152
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variant carriers: 0

GenotypeQuality
all individuals: 39348
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variant carriers: 0

GenotypeQuality
all individuals: 211
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variant carriers: 0

GenotypeQuality
all individuals: 849
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1714
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3333
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1665
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11408
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10338
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15460
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5109391998066e-5
allele num: 66184
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.31e-1

DP
type: SiteQuality
SIO_000300: 1.509365e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.51e0

MQRankSum
type: SiteQuality
SIO_000300: 7.7e-1

QD
type: SiteQuality
SIO_000300: 8.779999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.08e-2

MQ
type: SiteQuality
SIO_000300: 5.968e1

FS
type: SiteQuality
SIO_000300: 2.876e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.456e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.06e-1

GenotypeQuality
all individuals: 693
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1021
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 380
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38984
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variant carriers: 0

GenotypeQuality
all individuals: 689
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1154
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variant carriers: 0

GenotypeQuality
all individuals: 2178
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variant carriers: 0

GenotypeQuality
all individuals: 850
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11400
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.300728407908429e-4
allele num: 15376
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66150
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10328
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.57e0

DP
type: SiteQuality
SIO_000300: 1.508758e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.81e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.04e-2

MQRankSum
type: SiteQuality
SIO_000300: 9.2e-1

FS
type: SiteQuality
SIO_000300: 3.751e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.04e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.3e-1

QD
type: SiteQuality
SIO_000300: 1.314e1

GenotypeQuality
all individuals: 420
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3336
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 406
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variant carriers: 0

GenotypeQuality
all individuals: 2177
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variant carriers: 0

GenotypeQuality
all individuals: 686
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variant carriers: 0

GenotypeQuality
all individuals: 1012
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 850
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variant carriers: 0

GenotypeQuality
all individuals: 1662
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1713
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38934
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15312
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11394
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512310205069264e-5
allele num: 66124
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.89e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.008e0

MQ
type: SiteQuality
SIO_000300: 5.94e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.4e-3

MQRankSum
type: SiteQuality
SIO_000300: -5.9e-2

FS
type: SiteQuality
SIO_000300: 1.523e0

QD
type: SiteQuality
SIO_000300: 9.02e0

VQSLOD
type: SiteQuality
SIO_000300: -5.056e-1

DP
type: SiteQuality
SIO_000300: 1.508892e6

GenotypeQuality
all individuals: 9156
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2039
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 299
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 941
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6757
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 620
bin: 8.25e1
variant carriers: 5

GenotypeQuality
all individuals: 308
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variant carriers: 3

GenotypeQuality
all individuals: 2488
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4050
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2742
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 10
allele frequency: 1.662234042553192e-3
allele num: 6016
num of homozygotes: 0

South Asian
type: Population
allele count: 14
allele frequency: 9.455626097528029e-4
allele num: 14806
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 4.502476361999099e-4
allele num: 8884
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.492537313432836e-4
allele num: 6700
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 113
allele frequency: 2.180793577273429e-3
allele num: 51816
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.097694840834248e-4
allele num: 9110
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 772
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.99e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.971e0

DP
type: SiteQuality
SIO_000300: 1.267594e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.9e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

QD
type: SiteQuality
SIO_000300: 1.345e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

GenotypeQuality
all individuals: 1245
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6025
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2578
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10235
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variant carriers: 0

GenotypeQuality
all individuals: 13245
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 602
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variant carriers: 0

GenotypeQuality
all individuals: 444
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variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 388
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3245
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14816
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8888
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 772
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.921746483203936e-5
allele num: 52036
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9146
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6036
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6736
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.5e0

QD
type: SiteQuality
SIO_000300: 3.41e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.8e-3

VQSLOD
type: SiteQuality
SIO_000300: -4.26e0

DP
type: SiteQuality
SIO_000300: 1.277875e6

MQRankSum
type: SiteQuality
SIO_000300: 1.56e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.678e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.516e0

GenotypeQuality
all individuals: 444
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6684
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2769
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 785
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2384
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14359
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5849
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 598
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variant carriers: 0

GenotypeQuality
all individuals: 313
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variant carriers: 0

GenotypeQuality
all individuals: 4189
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 1
allele frequency: 1.128158844765343e-4
allele num: 8864
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6756
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 774
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9200
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14796
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52004
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6026
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.95e0

MQRankSum
type: SiteQuality
SIO_000300: 1.22e0

VQSLOD
type: SiteQuality
SIO_000300: -7.181e-1

DP
type: SiteQuality
SIO_000300: 1.286412e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.52e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

FS
type: SiteQuality
SIO_000300: 2.473e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.67e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.92e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 4500
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 505
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 316
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25194
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 916
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10600
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 896
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 611
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 894
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4191
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9554
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7022
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9058
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 784
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14952
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.856665428889714e-5
allele num: 53860
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6120
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -5.567e-1

MQ
type: SiteQuality
SIO_000300: 5.933e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.56e0

QD
type: SiteQuality
SIO_000300: 1.248e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.55e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.22e-1

DP
type: SiteQuality
SIO_000300: 1.389722e6

FS
type: SiteQuality
SIO_000300: 9.009e0

GenotypeQuality
all individuals: 383
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29822
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3309
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 571
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 929
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2351
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 626
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4191
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 449
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2848
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15070
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9790
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7252
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6186
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9182
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55344
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.47e-1

FS
type: SiteQuality
SIO_000300: 2.422e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.516e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.18e0

VQSLOD
type: SiteQuality
SIO_000300: 1.72e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.0e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.98e-1

DP
type: SiteQuality
SIO_000300: 1.438986e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3