http://identifiers.org/exac.variant/5-169186808-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169186808
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169186808
    reference: chr 5
allele count: 4
allele frequency: 3.300983693140556e-5
allele num: 121176
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.59+29C>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.923+29C>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2447+29C>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2447+29C>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-371+29C>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.150+29C>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.226+29C>A
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4058
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11281
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4239
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1839
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8846
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10151
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2663
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6207
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5130
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3855
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9784
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4786
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD

5-169186828-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169186828
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169186828
    reference: chr 5
allele count: 1
allele frequency: 8.260366760284156e-6
allele num: 121060
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.150+49T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.226+49T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.923+49T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-371+49T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2447+49T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2447+49T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.59+49T>C
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5537
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10805
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8792
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6193
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4058
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1840
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9398
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2662
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4232
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6923
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1091
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1072
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2432
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: DP

5-169188478-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169188478
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169188478
    reference: chr 5
allele count: 1
allele frequency: 8.284180528862085e-6
allele num: 120712
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.60-45A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.168A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2448-45A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.924-45A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.227-45A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-370-45A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.151-45A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2448-45A>G
  variant of: http://identifiers.org/hgnc/2988
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4225
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7677
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3360
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1461
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8732
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6211
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10183
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8762
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11616
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3756
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4034
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

5-169188484-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169188484
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169188484
    reference: chr 5
allele count: 1
allele frequency: 8.281299170213822e-6
allele num: 120754
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.151-39C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2448-39C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.60-39C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-370-39C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2448-39C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.924-39C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.174C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.227-39C>T
  variant of: http://identifiers.org/hgnc/2988
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2922
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3722
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8867
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10218
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6210
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7673
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4224
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8765
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24655
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4994
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4037
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

5-169188490-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169188490
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169188490
    reference: chr 5
allele count: 12
allele frequency: 9.921783275180659e-5
allele num: 120946
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2448-33T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.180T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-370-33T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.60-33T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2448-33T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.227-33T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.151-33T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.924-33T>C
  variant of: http://identifiers.org/hgnc/2988
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8768
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6210
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7672
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4288
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10272
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 9071
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4224
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2115
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12899
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum

5-169188498-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169188498
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169188498
    reference: chr 5
allele count: 4
allele frequency: 3.304528856798242e-5
allele num: 121046
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.924-25C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.227-25C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.188C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2448-25C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-370-25C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.60-25C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2448-25C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.151-25C>T
  variant of: http://identifiers.org/hgnc/2988
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4224
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4595
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9374
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8783
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10356
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6212
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7675
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13541
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3941
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
reference allele: C
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum

5-169188505-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169188505
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169188505
    reference: chr 5
allele count: 1
allele frequency: 8.250688932525866e-6
allele num: 121202
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.151-18T>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.227-18T>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.60-18T>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.195T>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2448-18T>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2448-18T>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.924-18T>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-370-18T>A
  variant of: http://identifiers.org/hgnc/2988
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8780
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7680
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4224
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9532
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10366
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6212
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4761
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2924
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24650
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2581
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5186
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP

5-169188506-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169188506
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169188506
    reference: chr 5
allele count: 17
allele frequency: 1.402617118529397e-4
allele num: 121202
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2448-17A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.196A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.60-17A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.227-17A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.151-17A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.924-17A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2448-17A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-370-17A>G
  variant of: http://identifiers.org/hgnc/2988
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4223
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4769
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6213
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2924
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8790
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10372
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7681
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9537
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3943
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Other
population: East Asian
reference allele: A
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: VQSLOD

5-169188517-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169188517
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169188517
    reference: chr 5
allele count: 1
allele frequency: 8.243751236562685e-6
allele num: 121304
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2448-6C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.207C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-370-6C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.227-6C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.924-6C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.60-6C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.151-6C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2448-6C>T
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4222
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2924
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9697
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8778
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6211
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7678
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4778
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10411
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2579
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.75e1
  variant carriers: 0
hgvs: c.2448-6C>T
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

5-169188526-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169188526
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169188526
    reference: chr 5
allele count: 1
allele frequency: 8.240762105679534e-6
allele num: 121348
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.230A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2451A>G
  hgvsp: ENST00000256935.8:c.2451A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.154A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.63A>G
  hgvsp: ENST00000519628.1:c.63A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2451A>G
  hgvsp: ENST00000524185.1:c.2451A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.216A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-367A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.927A>G
  hgvsp: ENST00000520908.1:c.927A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6210
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10416
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4756
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7673
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9779
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2924
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8774
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4222
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5243
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gln817Gln
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

5-169188527-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169188527
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169188527
    reference: chr 5
allele count: 1
allele frequency: 8.240897928238261e-6
allele num: 121346
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.928C>T
  hgvsp: ENSP00000429283.1:p.Leu310Phe
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.64C>T
  hgvsp: ENSP00000428841.1:p.Leu22Phe
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.155C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-366C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.217C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.231C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2452C>T
  hgvsp: ENSP00000256935.8:p.Leu818Phe
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2452C>T
  hgvsp: ENSP00000428850.1:p.Leu818Phe
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7676
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4746
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10418
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9782
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2924
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8778
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6210
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4222
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2581
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu818Phe
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

5-169188530-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169188530
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169188530
    reference: chr 5
allele count: 1
allele frequency: 8.240083060037246e-6
allele num: 121358
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2455C>G
  hgvsp: ENSP00000428850.1:p.Leu819Val
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2455C>G
  hgvsp: ENSP00000256935.8:p.Leu819Val
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.220C>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.67C>G
  hgvsp: ENSP00000428841.1:p.Leu23Val
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.234C>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.931C>G
  hgvsp: ENSP00000429283.1:p.Leu311Val
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.158C>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-363C>G
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4750
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2924
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7673
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8776
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9793
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10417
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6211
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4222
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14306
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Leu819Val
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

5-169188534-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169188534
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169188534
    reference: chr 5
allele count: 1
allele frequency: 8.239811473113496e-6
allele num: 121362
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.238A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.71A>G
  hgvsp: ENSP00000428841.1:p.Tyr24Cys
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-359A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.935A>G
  hgvsp: ENSP00000429283.1:p.Tyr312Cys
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2459A>G
  hgvsp: ENSP00000428850.1:p.Tyr820Cys
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.224A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2459A>G
  hgvsp: ENSP00000256935.8:p.Tyr820Cys
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.162A>G
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4222
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4759
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2924
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6211
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8775
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9791
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7674
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10419
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3761
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14322
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2581
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Tyr820Cys
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: African
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/5-169188537-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169188537
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169188537
    reference: chr 5
allele count: 1
allele frequency: 8.239675686364985e-6
allele num: 121364
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.227A>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2462A>C
  hgvsp: ENSP00000256935.8:p.Glu821Ala
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.938A>C
  hgvsp: ENSP00000429283.1:p.Glu313Ala
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2462A>C
  hgvsp: ENSP00000428850.1:p.Glu821Ala
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.241A>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.165A>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.74A>C
  hgvsp: ENSP00000428841.1:p.Glu25Ala
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-356A>C
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10419
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6211
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9798
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8775
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4222
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7673
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4754
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3759
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14324
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Glu821Ala
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQ

http://identifiers.org/exac.variant/5-169188546-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169188546
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169188546
    reference: chr 5
allele count: 1
allele frequency: 8.238861059847087e-6
allele num: 121376
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.236C>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2471C>A
  hgvsp: ENSP00000428850.1:p.Thr824Asn
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.83C>A
  hgvsp: ENSP00000428841.1:p.Thr28Asn
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.174C>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-347C>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2471C>A
  hgvsp: ENSP00000256935.8:p.Thr824Asn
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.947C>A
  hgvsp: ENSP00000429283.1:p.Thr316Asn
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.250C>A
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9811
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4222
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7673
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4754
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10418
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8775
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6211
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3953
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5246
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24637
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr824Asn
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: QD

5-169188574-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169188574
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169188574
    reference: chr 5
allele count: 1
allele frequency: 8.239675686364985e-6
allele num: 121364
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.264G>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.975G>A
  hgvsp: ENST00000520908.1:c.975G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-319G>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2499G>A
  hgvsp: ENST00000256935.8:c.2499G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.278G>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2499G>A
  hgvsp: ENST00000524185.1:c.2499G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.111G>A
  hgvsp: ENST00000519628.1:c.111G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.202G>A
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6210
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9803
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10415
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4757
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7673
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4222
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8773
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1750
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14353
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3758
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Lys833Lys
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

5-169188600-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169188600
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169188600
    reference: chr 5
allele count: 1
allele frequency: 8.245382585751979e-6
allele num: 121280
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1001T>C
  hgvsp: ENSP00000429283.1:p.Ile334Thr
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-293T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2525T>C
  hgvsp: ENSP00000428850.1:p.Ile842Thr
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.137T>C
  hgvsp: ENSP00000428841.1:p.Ile46Thr
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.304T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2525T>C
  hgvsp: ENSP00000256935.8:p.Ile842Thr
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.228T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.290T>C
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10396
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6210
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9746
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8773
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7674
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4711
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4223
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5217
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ile842Thr
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD

5-169188620-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169188620
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169188620
    reference: chr 5
allele count: 1
allele frequency: 8.253957772752034e-6
allele num: 121154
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2545A>T
  hgvsp: ENSP00000428850.1:p.Lys849Ter
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.310A>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.324A>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.157A>T
  hgvsp: ENSP00000428841.1:p.Lys53Ter
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-273A>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1021A>T
  hgvsp: ENSP00000429283.1:p.Lys341Ter
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.248A>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2545A>T
  hgvsp: ENSP00000256935.8:p.Lys849Ter
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4223
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7671
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4592
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9643
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6210
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10367
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8769
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Lys849Ter
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum

5-169188637-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169188637
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169188637
    reference: chr 5
allele count: 2
allele frequency: 1.654642928056125e-5
allele num: 120872
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.333+8C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1030+8C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2554+8C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.257+8C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.319+8C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.166+8C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2554+8C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-264+8C>T
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4222
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10276
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4345
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6205
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2922
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9509
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8729
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7658
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24628
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3755
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5112
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
hgvs: c.2554+8C>T
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ
site quality: VQSLOD

5-169188643-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169188643
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169188643
    reference: chr 5
allele count: 1
allele frequency: 8.282533792737874e-6
allele num: 120736
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.333+14A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1030+14A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2554+14A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2554+14A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.166+14A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.319+14A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-264+14A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.257+14A>G
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7619
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2919
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4217
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8676
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10192
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4156
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9400
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3904
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2517
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 690
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum

http://identifiers.org/exac.variant/5-169188644-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169188644
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169188644
    reference: chr 5
allele count: 1
allele frequency: 8.284455048546906e-6
allele num: 120708
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.319+15C>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.166+15C>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.257+15C>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-264+15C>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.333+15C>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2554+15C>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1030+15C>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2554+15C>A
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4125
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10183
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9397
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8671
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7615
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4215
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2919
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4011
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5029
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2517
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3905
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: African
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum

5-169188650-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169188650
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169188650
    reference: chr 5
allele count: 1
allele frequency: 8.293386853323161e-6
allele num: 120578
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2554+21C>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.319+21C>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.333+21C>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-264+21C>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.166+21C>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.257+21C>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1030+21C>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2554+21C>G
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7600
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2915
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10035
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4212
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9288
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8622
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3907
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6180
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1750
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3897
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3750
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4003
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

5-169188650-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169188650
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169188650
    reference: chr 5
allele count: 1
allele frequency: 8.293386853323161e-6
allele num: 120578
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-264+21C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.257+21C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.333+21C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.319+21C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1030+21C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2554+21C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.166+21C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2554+21C>T
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6180
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3907
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7600
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1750
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8622
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2915
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10035
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9288
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4212
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4947
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3897
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12569
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

5-169188655-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169188655
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169188655
    reference: chr 5
allele count: 1
allele frequency: 8.304406317992327e-6
allele num: 120418
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.257+26G>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.166+26G>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.333+26G>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2554+26G>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1030+26G>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-264+26G>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2554+26G>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.319+26G>A
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4210
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9790
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6177
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2915
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7578
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8534
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3682
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9018
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11822
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 614
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3749
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

5-169188657-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169188657
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169188657
    reference: chr 5
allele count: 1
allele frequency: 8.307441806370146e-6
allele num: 120374
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1030+28G>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.319+28G>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2554+28G>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.257+28G>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.166+28G>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.333+28G>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-264+28G>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2554+28G>C
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8488
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4210
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7567
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3605
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8860
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6174
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2914
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9652
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3748
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1185
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2097
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

5-169188657-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169188657
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169188657
    reference: chr 5
allele count: 1
allele frequency: 8.307441806370146e-6
allele num: 120374
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2554+28G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.333+28G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.257+28G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.166+28G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-264+28G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1030+28G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.319+28G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2554+28G>T
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8860
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6174
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7567
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2914
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8488
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4210
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9652
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3605
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 521
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3748
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 731
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2097
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP

5-169188661-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169188661
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169188661
    reference: chr 5
allele count: 1
allele frequency: 8.314901967305805e-6
allele num: 120266
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.319+32T>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.333+32T>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1030+32T>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.257+32T>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.166+32T>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2554+32T>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2554+32T>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-264+32T>G
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3495
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6168
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7553
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1908
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2913
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9389
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1686
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8422
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8571
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4209
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3845
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4653
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1283
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10775
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3983
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 718
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 906
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

5-169188671-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169188671
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169188671
    reference: chr 5
allele count: 6
allele frequency: 5.003419002985373e-5
allele num: 119918
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.333+42A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.257+42A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.319+42A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.166+42A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1030+42A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2554+42A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2554+42A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-264+42A>G
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7504
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3695
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6150
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3605
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8236
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2912
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4203
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1747
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7490
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2029
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8330
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3756
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8602
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1353
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3942
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 775
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: African
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD

5-169188676-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169188676
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169188676
    reference: chr 5
allele count: 1
allele frequency: 8.360085607276618e-6
allele num: 119616
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.166+47C>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.319+47C>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2554+47C>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.257+47C>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.333+47C>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-264+47C>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2554+47C>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1030+47C>G
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2911
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7912
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4201
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1747
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8174
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6147
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3597
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5004
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7470
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1984
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6664
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3724
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2070
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1431
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1237
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1647
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6768
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1040
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: QD

5-169230011-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169230011
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169230011
    reference: chr 5
allele count: 1
allele frequency: 8.453799983092399e-6
allele num: 118290
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.320-51G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.258-51G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-263-51G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.167-51G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2555-51G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.334-51G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2555-51G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1031-51G>T
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1888
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14108
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13817
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3406
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4669
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10037
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7735
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2007
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1199
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3052
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13613
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4263
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1019
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

5-169230017-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169230017
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169230017
    reference: chr 5
allele count: 1
allele frequency: 8.43554400823309e-6
allele num: 118546
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.258-45A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2555-45A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1031-45A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.167-45A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.334-45A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-263-45A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.320-45A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2555-45A>G
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3432
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16938
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6390
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14500
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4544
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1892
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7999
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3042
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1343
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3081
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18789
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1883
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1733
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

5-169230026-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169230026
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169230026
    reference: chr 5
allele count: 1
allele frequency: 8.39630562552477e-6
allele num: 119100
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.334-36G>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-263-36G>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2555-36G>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1031-36G>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.258-36G>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.167-36G>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.320-36G>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2555-36G>C
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3503
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15452
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22069
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2796
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8516
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1906
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1578
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3190
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 665
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 603
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25363
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1937
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

5-169230030-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169230030
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169230030
    reference: chr 5
allele count: 1
allele frequency: 8.373946976167747e-6
allele num: 119418
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1031-32T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.320-32T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2555-32T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.258-32T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.334-32T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2555-32T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-263-32T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.167-32T>C
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23246
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3518
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15752
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8663
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4379
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1017
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3331
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3253
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

5-169230034-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169230034
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169230034
    reference: chr 5
allele count: 1
allele frequency: 8.348360382020972e-6
allele num: 119784
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.334-28A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.258-28A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-263-28A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.320-28A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2555-28A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2555-28A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1031-28A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.167-28A>G
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3527
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1915
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8826
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16013
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24025
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1362
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3381
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

5-169230040-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169230040
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169230040
    reference: chr 5
allele count: 8
allele frequency: 6.651479122669903e-5
allele num: 120274
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.334-22C>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.320-22C>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2555-22C>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-263-22C>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2555-22C>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.167-22C>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1031-22C>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.258-22C>G
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3557
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16369
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24583
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8959
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1926
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1982
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28750
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8068
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: Latino
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

5-169230040-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169230040
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169230040
    reference: chr 5
allele count: 1
allele frequency: 8.314348903337379e-6
allele num: 120274
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.258-22C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.320-22C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2555-22C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-263-22C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.334-22C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1031-22C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.167-22C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2555-22C>T
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8959
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3557
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16369
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1926
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24583
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4505
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28750
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1373
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1982
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: QD

5-169230049-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169230049
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169230049
    reference: chr 5
allele count: 5
allele frequency: 4.146418323851856e-5
allele num: 120586
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2555-13G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1031-13G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.334-13G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.167-13G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2555-13G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-263-13G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.258-13G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.320-13G>T
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3565
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24802
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16624
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9119
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1932
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7513
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1997
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29219
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

5-169230051-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169230051
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169230051
    reference: chr 5
allele count: 1
allele frequency: 8.287201246395068e-6
allele num: 120668
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.258-11C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2555-11C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.334-11C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.320-11C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.167-11C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-263-11C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2555-11C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1031-11C>T
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24830
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1933
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3576
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9138
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16675
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4558
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ

5-169230065-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169230065
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169230065
    reference: chr 5
allele count: 1
allele frequency: 8.262414277451872e-6
allele num: 121030
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.261G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.323G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1034G>T
  hgvsp: ENSP00000429283.1:p.Cys345Phe
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.170G>T
  hgvsp: ENSP00000428841.1:p.Cys57Phe
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2558G>T
  hgvsp: ENSP00000256935.8:p.Cys853Phe
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2558G>T
  hgvsp: ENSP00000428850.1:p.Cys853Phe
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.337G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-260G>T
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3576
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24945
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16914
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9188
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1934
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7512
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29651
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Cys853Phe
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ

5-169230066-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169230066
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169230066
    reference: chr 5
allele count: 1
allele frequency: 8.261185645363822e-6
allele num: 121048
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.171C>T
  hgvsp: ENST00000519628.1:c.171C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1035C>T
  hgvsp: ENST00000520908.1:c.1035C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.338C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2559C>T
  hgvsp: ENST00000524185.1:c.2559C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-259C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.262C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.324C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2559C>T
  hgvsp: ENST00000256935.8:c.2559C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3575
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16936
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24912
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9211
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3499
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2005
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Cys853Cys
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

5-169230068-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169230068
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169230068
    reference: chr 5
allele count: 1
allele frequency: 8.258183860205463e-6
allele num: 121092
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1037G>A
  hgvsp: ENSP00000429283.1:p.Arg346Gln
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2561G>A
  hgvsp: ENSP00000428850.1:p.Arg854Gln
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.173G>A
  hgvsp: ENSP00000428841.1:p.Arg58Gln
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.340G>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-257G>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2561G>A
  hgvsp: ENSP00000256935.8:p.Arg854Gln
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.264G>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.326G>A
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3585
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9213
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16990
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24888
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1394
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8279
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7516
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg854Gln
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

5-169230069-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169230069
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169230069
    reference: chr 5
allele count: 1
allele frequency: 8.256683785524381e-6
allele num: 121114
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-256G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.174G>T
  hgvsp: ENST00000519628.1:c.174G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.327G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.265G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2562G>T
  hgvsp: ENST00000256935.8:c.2562G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1038G>T
  hgvsp: ENST00000520908.1:c.1038G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.341G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2562G>T
  hgvsp: ENST00000524185.1:c.2562G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24893
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17005
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9215
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3580
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1937
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29681
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4585
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg854Arg
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum

5-169230085-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169230085
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169230085
    reference: chr 5
allele count: 7
allele frequency: 5.772529357435018e-5
allele num: 121264
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-240G>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.357G>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.281G>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.190G>A
  hgvsp: ENSP00000428841.1:p.Val64Ile
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1054G>A
  hgvsp: ENSP00000429283.1:p.Val352Ile
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2578G>A
  hgvsp: ENSP00000428850.1:p.Val860Ile
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2578G>A
  hgvsp: ENSP00000256935.8:p.Val860Ile
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.343G>A
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17108
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24911
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1087
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3580
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9245
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7523
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1397
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8303
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Val860Ile
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

5-169230088-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169230088
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169230088
    reference: chr 5
allele count: 2
allele frequency: 1.649049323065253e-5
allele num: 121282
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.284A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1057A>G
  hgvsp: ENSP00000429283.1:p.Ile353Val
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-237A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.346A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.193A>G
  hgvsp: ENSP00000428841.1:p.Ile65Val
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2581A>G
  hgvsp: ENSP00000428850.1:p.Ile861Val
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2581A>G
  hgvsp: ENSP00000256935.8:p.Ile861Val
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.360A>G
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17127
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1937
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24912
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3580
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9243
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ile861Val
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum

5-169230094-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169230094
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169230094
    reference: chr 5
allele count: 27
allele frequency: 2.225555976854218e-4
allele num: 121318
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.199A>G
  hgvsp: ENSP00000428841.1:p.Lys67Glu
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2587A>G
  hgvsp: ENSP00000256935.8:p.Lys863Glu
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-231A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.366A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2587A>G
  hgvsp: ENSP00000428850.1:p.Lys863Glu
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.352A>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1063A>G
  hgvsp: ENSP00000429283.1:p.Lys355Glu
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.290A>G
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17145
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9251
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3582
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1937
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24893
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 5.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4603
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7539
  bin: 9.75e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 29830
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Lys863Glu
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum

5-169230102-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169230102
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169230102
    reference: chr 5
allele count: 1
allele frequency: 8.241577108195424e-6
allele num: 121336
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.360G>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.207G>A
  hgvsp: ENST00000519628.1:c.207G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1071G>A
  hgvsp: ENST00000520908.1:c.1071G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.374G>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2595G>A
  hgvsp: ENST00000524185.1:c.2595G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.298G>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2595G>A
  hgvsp: ENST00000256935.8:c.2595G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-223G>A
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17167
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24887
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3582
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9256
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8313
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7524
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu865Leu
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

5-169230109-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169230109
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169230109
    reference: chr 5
allele count: 1
allele frequency: 8.240626287597857e-6
allele num: 121350
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2602C>T
  hgvsp: ENST00000256935.8:c.2602C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.214C>T
  hgvsp: ENST00000519628.1:c.214C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1078C>T
  hgvsp: ENST00000520908.1:c.1078C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.381C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.305C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2602C>T
  hgvsp: ENST00000524185.1:c.2602C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-216C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.367C>T
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24875
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9261
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17182
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3583
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29873
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3367
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8313
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu868Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

5-169230111-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169230111
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169230111
    reference: chr 5
allele count: 11
allele frequency: 9.064688916357643e-5
allele num: 121350
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2604G>A
  hgvsp: ENST00000256935.8:c.2604G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.383G>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2604G>A
  hgvsp: ENST00000524185.1:c.2604G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.369G>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.216G>A
  hgvsp: ENST00000519628.1:c.216G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1080G>A
  hgvsp: ENST00000520908.1:c.1080G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-214G>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.307G>A
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24872
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3583
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9258
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17187
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1942
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7526
  bin: 9.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 3367
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8313
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu868Leu
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP

5-169230123-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169230123
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169230123
    reference: chr 5
allele count: 4
allele frequency: 3.295598727898891e-5
allele num: 121374
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-202G>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1092G>A
  hgvsp: ENST00000520908.1:c.1092G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.228G>A
  hgvsp: ENST00000519628.1:c.228G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.319G>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.395G>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.381G>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2616G>A
  hgvsp: ENST00000256935.8:c.2616G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2616G>A
  hgvsp: ENST00000524185.1:c.2616G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24865
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1942
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17208
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3587
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9259
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3526
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1396
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Lys872Lys
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

5-169230142-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169230142
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169230142
    reference: chr 5
allele count: 19
allele frequency: 1.565306223328006e-4
allele num: 121382
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2635G>A
  hgvsp: ENSP00000256935.8:p.Val879Ile
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.247G>A
  hgvsp: ENSP00000428841.1:p.Val83Ile
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1111G>A
  hgvsp: ENSP00000429283.1:p.Val371Ile
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.338G>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.414G>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-183G>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2635G>A
  hgvsp: ENSP00000428850.1:p.Val879Ile
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.400G>A
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1942
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24835
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9263
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3590
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17228
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3365
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29877
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Val879Ile
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/5-169230145-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169230145
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169230145
    reference: chr 5
allele count: 42
allele frequency: 3.460150598935592e-4
allele num: 121382
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2638C>A
  hgvsp: ENSP00000428850.1:p.Leu880Met
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.403C>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1114C>A
  hgvsp: ENSP00000429283.1:p.Leu372Met
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.417C>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.341C>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-180C>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.250C>A
  hgvsp: ENSP00000428841.1:p.Leu84Met
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2638C>A
  hgvsp: ENSP00000256935.8:p.Leu880Met
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 9.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 1945
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3590
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17230
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 24814
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9258
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1087
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2014
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu880Met
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ

5-169230147-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169230147
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169230147
    reference: chr 5
allele count: 7
allele frequency: 5.766822645488697e-5
allele num: 121384
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2640G>A
  hgvsp: ENST00000256935.8:c.2640G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.252G>A
  hgvsp: ENST00000519628.1:c.252G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2640G>A
  hgvsp: ENST00000524185.1:c.2640G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.405G>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.419G>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1116G>A
  hgvsp: ENST00000520908.1:c.1116G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-178G>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.343G>A
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3602
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9265
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24813
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17231
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1952
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3360
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3527
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2020
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu880Leu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: Latino
reference allele: G
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ

5-169230162-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169230162
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169230162
    reference: chr 5
allele count: 4
allele frequency: 3.295761650517435e-5
allele num: 121368
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1131C>T
  hgvsp: ENST00000520908.1:c.1131C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2655C>T
  hgvsp: ENST00000524185.1:c.2655C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.434C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-163C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2655C>T
  hgvsp: ENST00000256935.8:c.2655C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.420C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.267C>T
  hgvsp: ENST00000519628.1:c.267C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.358C>T
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9272
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17236
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24783
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1950
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3602
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4616
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Cys885Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: African
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: BaseQRankSum

5-169230163-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169230163
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169230163
    reference: chr 5
allele count: 32
allele frequency: 2.636609320413948e-4
allele num: 121368
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.359G>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.421G>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.268G>A
  hgvsp: ENSP00000428841.1:p.Val90Ile
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1132G>A
  hgvsp: ENSP00000429283.1:p.Val378Ile
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.435G>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-162G>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2656G>A
  hgvsp: ENSP00000428850.1:p.Val886Ile
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2656G>A
  hgvsp: ENSP00000256935.8:p.Val886Ile
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24763
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17235
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1949
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3603
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9266
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 6.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3528
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2018
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Val886Ile
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum

5-169230164-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169230164
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169230164
    reference: chr 5
allele count: 4
allele frequency: 3.295815961636702e-5
allele num: 121366
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2657T>C
  hgvsp: ENSP00000428850.1:p.Val886Ala
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1133T>C
  hgvsp: ENSP00000429283.1:p.Val378Ala
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.436T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.360T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.269T>C
  hgvsp: ENSP00000428841.1:p.Val90Ala
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-161T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.422T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2657T>C
  hgvsp: ENSP00000256935.8:p.Val886Ala
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1951
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3609
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24761
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9272
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17243
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8313
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3363
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Val886Ala
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/5-169230188-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169230188
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169230188
    reference: chr 5
allele count: 1
allele frequency: 8.244294947896055e-6
allele num: 121296
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2681A>C
  hgvsp: ENSP00000428850.1:p.Glu894Ala
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.384A>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.293A>C
  hgvsp: ENSP00000428841.1:p.Glu98Ala
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.446A>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2681A>C
  hgvsp: ENSP00000256935.8:p.Glu894Ala
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1157A>C
  hgvsp: ENSP00000429283.1:p.Glu386Ala
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.460A>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-137A>C
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1949
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3595
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17213
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24716
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9258
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2015
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Glu894Ala
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

5-169230209-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169230209
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169230209
    reference: chr 5
allele count: 3
allele frequency: 2.478150968957029e-5
allele num: 121058
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.481C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2702C>T
  hgvsp: ENSP00000428850.1:p.Ala901Val
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.314C>T
  hgvsp: ENSP00000428841.1:p.Ala105Val
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.467C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.405C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1178C>T
  hgvsp: ENSP00000429283.1:p.Ala393Val
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2702C>T
  hgvsp: ENSP00000256935.8:p.Ala901Val
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-116C>T
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9035
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3557
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24679
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17043
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3341
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala901Val
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum

5-169230210-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169230210
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169230210
    reference: chr 5
allele count: 1
allele frequency: 8.261322141995606e-6
allele num: 121046
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.406G>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-115G>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.468G>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.482G>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2703G>C
  hgvsp: ENST00000524185.1:c.2703G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2703G>C
  hgvsp: ENST00000256935.8:c.2703G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.315G>C
  hgvsp: ENST00000519628.1:c.315G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1179G>C
  hgvsp: ENST00000520908.1:c.1179G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 8989
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3551
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17044
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24687
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1911
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8191
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3341
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1384
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29339
  bin: 6.25e1
  variant carriers: 0
hgvs: c.2703G>C
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

5-169230217-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169230217
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169230217
    reference: chr 5
allele count: 5
allele frequency: 4.135922972570559e-5
allele num: 120892
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1179+7C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.315+7C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2703+7C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2703+7C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.406+7C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.482+7C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-115+7C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.468+7C>T
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1904
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24704
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8829
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16771
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3524
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3447
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1382
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
hgvs: c.2703+7C>T
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

http://identifiers.org/exac.variant/5-169230221-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169230221
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169230221
    reference: chr 5
allele count: 1
allele frequency: 8.279379377721846e-6
allele num: 120782
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2703+11C>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1179+11C>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2703+11C>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.406+11C>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.482+11C>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.468+11C>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-115+11C>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.315+11C>A
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3525
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24655
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8745
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16629
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7991
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: FS

5-169230225-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169230225
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169230225
    reference: chr 5
allele count: 2
allele frequency: 1.656918463042434e-5
allele num: 120706
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1179+15T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-115+15T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.482+15T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.315+15T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.468+15T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2703+15T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2703+15T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.406+15T>C
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3512
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24641
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16440
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8662
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 924
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4526
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3316
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28679
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum

5-169230225-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169230225
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169230225
    reference: chr 5
allele count: 1
allele frequency: 8.284592315212168e-6
allele num: 120706
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.482+15T>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2703+15T>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.468+15T>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-115+15T>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1179+15T>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.315+15T>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2703+15T>A
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.406+15T>A
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16440
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24641
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8662
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3512
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 924
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7919
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

5-169230228-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169230228
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169230228
    reference: chr 5
allele count: 1
allele frequency: 8.288575028181154e-6
allele num: 120648
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.315+18T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.406+18T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-115+18T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2703+18T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1179+18T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.482+18T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.468+18T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2703+18T>C
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16272
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8634
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24517
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3509
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3405
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4523
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1382
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD

5-169230238-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169230238
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169230238
    reference: chr 5
allele count: 1
allele frequency: 8.306337735692333e-6
allele num: 120390
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1179+28C>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2703+28C>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.406+28C>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-115+28C>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.468+28C>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2703+28C>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.315+28C>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.482+28C>G
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23762
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15470
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8488
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1903
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3505
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2030
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7704
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7518
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
population: African
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: DP

5-169230238-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169230238
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169230238
    reference: chr 5
allele count: 9
allele frequency: 7.475703962123099e-5
allele num: 120390
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.406+28C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.468+28C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2703+28C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-115+28C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.482+28C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2703+28C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1179+28C>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.315+28C>T
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8488
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3505
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2030
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23762
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15470
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1903
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7518
  bin: 9.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 877
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4472
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1990
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

5-169230248-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169230248
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169230248
    reference: chr 5
allele count: 1
allele frequency: 8.324869715788949e-6
allele num: 120122
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1179+38A>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.315+38A>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.406+38A>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2703+38A>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.482+38A>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.468+38A>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2703+38A>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-115+38A>T
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22424
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14499
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3505
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1896
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8326
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2404
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3263
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3315
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4441
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1381
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23948
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 805
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: African
population: European (Finnish)
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: DP

5-169230260-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169230260
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169230260
    reference: chr 5
allele count: 12
allele frequency: 1.00539562317772e-4
allele num: 119356
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.315+50T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.468+50T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2703+50T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.482+50T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2703+50T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1179+50T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.406+50T>C
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-115+50T>C
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3533
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14569
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8258
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3728
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21758
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2307
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1699
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3007
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1383
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7519
  bin: 9.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 4437
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1689
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6940
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: QD

5-169267720-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169267720
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169267720
    reference: chr 5
allele count: 878
allele frequency: 8.076236731239767e-3
allele num: 108714
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2704-41G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1180-41G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2704-41G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.483-41G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.316-41G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.469-41G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.407-41G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-114-41G>T
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1993
  bin: 9.75e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 5649
  bin: 7.5e0
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 4.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 16891
  bin: 2.25e1
  variant carriers: 222
genotype depth: GenotypeDepth
  all individuals: 2566
  bin: 3.25e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 13975
  bin: 1.25e1
  variant carriers: 178
genotype depth: GenotypeDepth
  all individuals: 8180
  bin: 1.75e1
  variant carriers: 227
genotype depth: GenotypeDepth
  all individuals: 1514
  bin: 3.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5432
  bin: 2.75e1
  variant carriers: 106
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2578
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5752
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 8.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5810
  bin: 3.75e1
  variant carriers: 1
num of homozygotes: 5
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ

5-169267727-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169267727
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169267727
    reference: chr 5
allele count: 1
allele frequency: 9.121258003903899e-6
allele num: 109634
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.483-34G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.407-34G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.469-34G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2704-34G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-114-34G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.316-34G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2704-34G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1180-34G>T
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2757
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5337
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23539
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6285
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10792
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4081
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1531
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1993
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3867
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5831
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23546
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum

5-169267728-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169267728
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169267728
    reference: chr 5
allele count: 1
allele frequency: 9.098518761145685e-6
allele num: 109908
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.407-33G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.483-33G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1180-33G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2704-33G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-114-33G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.469-33G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.316-33G>T
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2704-33G>T
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24314
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6430
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2765
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10262
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1993
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5282
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3755
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24315
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3562
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2697
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3617
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4580
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5760
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum

5-169267729-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 169267729
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 169267729
    reference: chr 5
allele count: 1
allele frequency: 9.078199611453057e-6
allele num: 110154
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520836
  gene symbol: DOCK2
  hgvsc: ENST00000520836.1:n.483-32T>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000523351
  gene symbol: DOCK2
  hgvsc: ENST00000523351.1:n.469-32T>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000256935
  ensembl transcript: ENST00000256935
  gene symbol: DOCK2
  hgvsc: ENST00000256935.8:c.2704-32T>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000438827
  ensembl transcript: ENST00000540750
  gene symbol: DOCK2
  hgvsc: ENST00000540750.1:c.-114-32T>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000429283
  ensembl transcript: ENST00000520908
  gene symbol: DOCK2
  hgvsc: ENST00000520908.1:c.1180-32T>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl transcript: ENST00000520181
  gene symbol: DOCK2
  hgvsc: ENST00000520181.1:n.407-32T>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428841
  ensembl transcript: ENST00000519628
  gene symbol: DOCK2
  hgvsc: ENST00000519628.1:c.316-32T>G
  variant of: http://identifiers.org/hgnc/2988
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134516
  ensembl protein: ENSP00000428850
  ensembl transcript: ENST00000524185
  gene symbol: DOCK2
  hgvsc: ENST00000524185.1:c.2704-32T>G
  variant of: http://identifiers.org/hgnc/2988
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2797
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25053
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5230
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9829
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6505
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1993
  bin: 9.75e1
  variant carriers: 0
num of homozygotes: 0
reference allele: T

GenotypeQuality
all individuals: 2977
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4663
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25712
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2438
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5444
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.818402230573403e-4
allele num: 16498
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.163061177017911e-4
allele num: 8598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.32e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.06e0

DP
type: SiteQuality
SIO_000300: 2.826618e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.39e-1

MQ
type: SiteQuality
SIO_000300: 5.878e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.087e0

FS
type: SiteQuality
SIO_000300: 7.03e-1

QD
type: SiteQuality
SIO_000300: 1.345e1

VQSLOD
type: SiteQuality
SIO_000300: -4.471e-1

GenotypeQuality
all individuals: 230
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4945
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25701
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 625
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 475
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4738
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2898
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3846
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4612
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.667013347200555e-5
allele num: 11538
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

MQ
type: SiteQuality
SIO_000300: 5.956e1

VQSLOD
type: SiteQuality
SIO_000300: -1.697e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.13e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.61e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.047e1

MQRankSum
type: SiteQuality
SIO_000300: 2.6e-1

DP
type: SiteQuality
SIO_000300: 2.811763e6

GenotypeQuality
all individuals: 304
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 539
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4985
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2113
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2526
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24658
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 539
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3912
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.643042350907519e-5
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66498
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16120
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.9e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

FS
type: SiteQuality
SIO_000300: 8.89e-1

QD
type: SiteQuality
SIO_000300: 1.389e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.59e0

MQRankSum
type: SiteQuality
SIO_000300: 7.57e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -5.827e0

DP
type: SiteQuality
SIO_000300: 2.471151e6

GenotypeQuality
all individuals: 3761
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 505
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 417
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 401
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12023
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3917
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2530
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2112
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66508
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16148
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.324e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.059e0

MQRankSum
type: SiteQuality
SIO_000300: 6.97e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.214e0

FS
type: SiteQuality
SIO_000300: 4.8e0

VQSLOD
type: SiteQuality
SIO_000300: 6.25e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.63e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.474954e6

GenotypeQuality
all individuals: 145
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3757
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2550
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3937
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24657
bin: 9.75e1
variant carriers: 12

GenotypeQuality
all individuals: 5072
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4032
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 11
allele frequency: 1.057285659361784e-3
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66550
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.147037128104254e-5
allele num: 16268
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

QD
type: SiteQuality
SIO_000300: 1.536e1

MQ
type: SiteQuality
SIO_000300: 5.969e1

DP
type: SiteQuality
SIO_000300: 2.482341e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.31e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.9e0

FS
type: SiteQuality
SIO_000300: 7.23e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.92e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.65e-1

GenotypeQuality
all individuals: 49
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3758
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24653
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2571
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5140
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2112
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4035
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.505857614899369e-5
allele num: 66580
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16340
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.128e1

MQ
type: SiteQuality
SIO_000300: 5.985e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.77e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.93e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.91e-1

DP
type: SiteQuality
SIO_000300: 2.489773e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.5e-3

FS
type: SiteQuality
SIO_000300: 1.399e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.9e-1

GenotypeQuality
all individuals: 30
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4041
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3942
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variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
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variant carriers: 0

GenotypeQuality
all individuals: 13964
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2115
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3761
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16444
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501005673801447e-5
allele num: 66622
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.31e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.1e-3

FS
type: SiteQuality
SIO_000300: 2.474e0

QD
type: SiteQuality
SIO_000300: 1.351e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.879e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.379e0

VQSLOD
type: SiteQuality
SIO_000300: 3.33e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.54e-1

MQ
type: SiteQuality
SIO_000300: 5.954e1

DP
type: SiteQuality
SIO_000300: 2.493385e6

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13973
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3762
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5178
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2576
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2114
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4045
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24658
bin: 9.75e1
variant carriers: 17

GenotypeQuality
all individuals: 51
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 16
allele frequency: 2.40132072639952e-4
allele num: 66630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.083465141744738e-5
allele num: 16438
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.49436e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.67e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.95e0

FS
type: SiteQuality
SIO_000300: 6.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.05e-1

MQ
type: SiteQuality
SIO_000300: 5.976e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

QD
type: SiteQuality
SIO_000300: 1.526e1

MQRankSum
type: SiteQuality
SIO_000300: 6.0e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.23e0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24640
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
all individuals: 5216
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4036
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3946
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variant carriers: 0

GenotypeQuality
all individuals: 3760
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variant carriers: 0

GenotypeQuality
all individuals: 2115
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14206
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.065752759917505e-5
allele num: 16486
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66670
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.05e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-2

DP
type: SiteQuality
SIO_000300: 2.496024e6

QD
type: SiteQuality
SIO_000300: 9.5e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.932e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.57e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.19e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.46e0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2112
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3953
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3759
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24640
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 14300
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2582
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4040
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66690
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.423e0

MQRankSum
type: SiteQuality
SIO_000300: -4.1e-2

MQ
type: SiteQuality
SIO_000300: 5.991e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.17e-2

QD
type: SiteQuality
SIO_000300: 1.288e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.54e0

VQSLOD
type: SiteQuality
SIO_000300: 8.63e-1

DP
type: SiteQuality
SIO_000300: 2.496932e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.6e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.3e0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
all individuals: 3759
bin: 9.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66690
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.983e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.174e0

VQSLOD
type: SiteQuality
SIO_000300: -1.404e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.47e-2

FS
type: SiteQuality
SIO_000300: 8.151999999999999e0

DP
type: SiteQuality
SIO_000300: 2.496984e6

MQRankSum
type: SiteQuality
SIO_000300: -6.41e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.056e0

QD
type: SiteQuality
SIO_000300: 1.253e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66700
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.0e0

FS
type: SiteQuality
SIO_000300: 8.675000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.85e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.27e-1

MQ
type: SiteQuality
SIO_000300: 5.949e1

QD
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SIO_000300: 1.217e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.44e0

InbreedingCoeff
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SIO_000300: 2.69e-2

DP
type: SiteQuality
SIO_000300: 2.497011e6

VQSLOD
type: SiteQuality
SIO_000300: -3.544e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66706
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.497053e6

MQRankSum
type: SiteQuality
SIO_000300: 9.11e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.35e0

QD
type: SiteQuality
SIO_000300: 1.389e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.66e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.3e0

FS
type: SiteQuality
SIO_000300: 7.078e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.98e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66704
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.339e0

MQRankSum
type: SiteQuality
SIO_000300: -2.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.15e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.96e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.7e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.84e-1

DP
type: SiteQuality
SIO_000300: 2.497056e6

QD
type: SiteQuality
SIO_000300: 1.332e1

MQ
type: SiteQuality
SIO_000300: 5.986e1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2577
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498890820792613e-5
allele num: 66716
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.080000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.414e0

VQSLOD
type: SiteQuality
SIO_000300: -2.313e0

FS
type: SiteQuality
SIO_000300: 8.026999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.18e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.136e0

MQ
type: SiteQuality
SIO_000300: 5.942e1

DP
type: SiteQuality
SIO_000300: 2.497097e6

QD
type: SiteQuality
SIO_000300: 1.033e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498711108446736e-5
allele num: 66724
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.015e0

MQ
type: SiteQuality
SIO_000300: 5.92e1

DP
type: SiteQuality
SIO_000300: 2.496877e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -4.761e0

VQSLOD
type: SiteQuality
SIO_000300: -4.88e-2

MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
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allele frequency: 9.633911368015414e-5
allele num: 10380
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66674
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele num: 16508
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.57e-1

DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.975e1

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.429e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

South Asian
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allele count: 1
allele frequency: 6.062075654704171e-5
allele num: 16496
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66612
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.38e-1

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.979e1

BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 8.02e-1

FS
type: SiteQuality
SIO_000300: 7.039e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.095e0

MQRankSum
type: SiteQuality
SIO_000300: 7.48e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.51285930408472e-4
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.503262078710802e-5
allele num: 66522
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.678e0

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -4.997e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.81e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.0e-3

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.357e1

DP
type: SiteQuality
SIO_000300: 2.48289e6

MQ
type: SiteQuality
SIO_000300: 5.957e1

VQSLOD
type: SiteQuality
SIO_000300: 1.75e0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24622
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13093
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16444
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50407604608489e-5
allele num: 66486
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10166
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.6e-2

DP
type: SiteQuality
SIO_000300: 2.474617e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.97e0

MQ
type: SiteQuality
SIO_000300: 5.964e1

VQSLOD
type: SiteQuality
SIO_000300: 7.46e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.526e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.47e-1

FS
type: SiteQuality
SIO_000300: 3.096e0

MQRankSum
type: SiteQuality
SIO_000300: -5.95e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16440
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66478
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.670019074041963e-5
allele num: 11534
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10158
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.473731e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.98e0

MQRankSum
type: SiteQuality
SIO_000300: 6.66e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.008e0

VQSLOD
type: SiteQuality
SIO_000300: 3.63e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.453e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.01e0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 105
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variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505933377507379e-5
allele num: 66404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10140
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16420
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.44e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.759e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

DP
type: SiteQuality
SIO_000300: 2.465326e6

MQRankSum
type: SiteQuality
SIO_000300: 8.400000000000001e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.23e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.19e-1

QD
type: SiteQuality
SIO_000300: 1.299e1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2103
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10140
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.090133982947625e-5
allele num: 16420
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.23e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.759e0

MQRankSum
type: SiteQuality
SIO_000300: 8.400000000000001e-2

DP
type: SiteQuality
SIO_000300: 2.465326e6

ClippingRankSum
type: SiteQuality
SIO_000300: 6.19e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.44e0

QD
type: SiteQuality
SIO_000300: 1.299e1

GenotypeQuality
all individuals: 161
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 5.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 429
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16414
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507477086348288e-5
allele num: 66336
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10110
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.91e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 7.109e0

MQRankSum
type: SiteQuality
SIO_000300: 2.19e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.571e0

DP
type: SiteQuality
SIO_000300: 2.452735e6

VQSLOD
type: SiteQuality
SIO_000300: -7.315e-1

QD
type: SiteQuality
SIO_000300: 1.699e1

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 500
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10112
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.17096018735363e-4
allele num: 8540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66308
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16404
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -6.820000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.08e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.86e-1

BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.88e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.44631e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10112
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16404
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.688097306689835e-5
allele num: 11510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66308
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.88e-1

InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -3.413e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.08e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.44631e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10090
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66256
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.098304671301378e-5
allele num: 16398
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

MQ
type: SiteQuality
SIO_000300: 5.965e1

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 9.57e-1

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -5.87e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 738
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GenotypeQuality
all individuals: 1009
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66102
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 7.08215297450425e-4
allele num: 8472
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10040
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.402104e6

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.2e-1

MQ
type: SiteQuality
SIO_000300: 5.96e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.1e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 4.47e0

QD
type: SiteQuality
SIO_000300: 1.559e1

GenotypeQuality
all individuals: 3727
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.515564851019975e-5
allele num: 65982
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African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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South Asian
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ReadPosRankSum
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FS
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BaseQRankSum
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MQ
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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SIO_000300: -1.569e0

DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Finnish)
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European (Non-Finnish)
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allele frequency: 0.0e0
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African
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South Asian
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allele frequency: 6.159911297277319e-5
allele num: 16234
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East Asian
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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DP
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FS
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MQ
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.530830935031535e-5
allele num: 65324
num of homozygotes: 0

South Asian
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Other
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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MQRankSum
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InbreedingCoeff
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QD
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DP
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BaseQRankSum
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FS
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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num of homozygotes: 0

African
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Other
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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allele frequency: 6.127450980392157e-5
allele num: 16320
num of homozygotes: 0

QD
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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FS
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MQ
type: SiteQuality
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ReadPosRankSum
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SIO_000300: -1.671e0

BaseQRankSum
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

Other
type: Population
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African
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allele num: 10144
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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InbreedingCoeff
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MQ
type: SiteQuality
SIO_000300: 5.883e1

BaseQRankSum
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FS
type: SiteQuality
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VQSLOD
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MQRankSum
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ReadPosRankSum
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DP
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.515013786625458e-5
allele num: 66006
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African
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Other
type: Population
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South Asian
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ClippingRankSum
type: SiteQuality
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DP
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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FS
type: SiteQuality
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MQ
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VQSLOD
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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European (Non-Finnish)
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South Asian
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Other
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East Asian
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allele frequency: 0.0e0
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Latino
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num of homozygotes: 0

QD
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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DP
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MQ
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FS
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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num of homozygotes: 0

European (Finnish)
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European (Non-Finnish)
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African
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East Asian
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Other
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South Asian
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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DP
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BaseQRankSum
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VQSLOD
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FS
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MQ
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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African
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European (Non-Finnish)
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East Asian
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European (Finnish)
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Latino
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ClippingRankSum
type: SiteQuality
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VQSLOD
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QD
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BaseQRankSum
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MQRankSum
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FS
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DP
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InbreedingCoeff
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1384
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11462
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16442
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505888022166672e-5
allele num: 66406
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10280
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.172e1

DP
type: SiteQuality
SIO_000300: 1.745784e6

BaseQRankSum
type: SiteQuality
SIO_000300: 6.14e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.97e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.05e-1

FS
type: SiteQuality
SIO_000300: 4.362e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.84e0

MQ
type: SiteQuality
SIO_000300: 6.047e1

GenotypeQuality
all individuals: 1390
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2004
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8261
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.674922600619196e-5
allele num: 10336
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.752308e6

VQSLOD
type: SiteQuality
SIO_000300: -1.833e0

QD
type: SiteQuality
SIO_000300: 6.28e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.38e0

FS
type: SiteQuality
SIO_000300: 2.053e0

MQRankSum
type: SiteQuality
SIO_000300: -2.54e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.587e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.942e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQ
type: SiteQuality
SIO_000300: 5.961e1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1391
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variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.067224851352991e-5
allele num: 16482
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10338
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66580
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.12e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.69e-1

MQ
type: SiteQuality
SIO_000300: 5.94e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.75285e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 7.69e-1

QD
type: SiteQuality
SIO_000300: 1.342e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.610000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.635e0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 3509
bin: 7.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3364
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variant carriers: 0

GenotypeQuality
all individuals: 4581
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.677542519958348e-5
allele num: 11524
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e0

MQRankSum
type: SiteQuality
SIO_000300: 7.92e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.63e0

QD
type: SiteQuality
SIO_000300: 2.005e1

VQSLOD
type: SiteQuality
SIO_000300: -1.364e0

FS
type: SiteQuality
SIO_000300: 4.729e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.49e0

DP
type: SiteQuality
SIO_000300: 1.754233e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 38
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1395
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 24
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variant carriers: 0

GenotypeQuality
all individuals: 7518
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501276084671971e-5
allele num: 66610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -7.064e-1

QD
type: SiteQuality
SIO_000300: 1.745e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

DP
type: SiteQuality
SIO_000300: 1.754195e6

MQ
type: SiteQuality
SIO_000300: 5.938e1

MQRankSum
type: SiteQuality
SIO_000300: -1.227e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.326e0

FS
type: SiteQuality
SIO_000300: 1.056e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.02e0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3526
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 65
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 29806
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variant carriers: 0

GenotypeQuality
all individuals: 21
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3370
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 6.946052326927529e-4
allele num: 8638
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499835018148004e-5
allele num: 66674
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.36e-1

FS
type: SiteQuality
SIO_000300: 3.567e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.82e-1

DP
type: SiteQuality
SIO_000300: 1.757212e6

VQSLOD
type: SiteQuality
SIO_000300: 1.8e0

MQ
type: SiteQuality
SIO_000300: 5.944e1

MQRankSum
type: SiteQuality
SIO_000300: 2.94e-1

QD
type: SiteQuality
SIO_000300: 1.106e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.025e0

GenotypeQuality
all individuals: 18
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1396
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4601
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499520153550864e-5
allele num: 66688
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.626492106276473e-5
allele num: 10388
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.46e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.07e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.981e1

QD
type: SiteQuality
SIO_000300: 1.367e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.75718e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.148e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.15e0

MQRankSum
type: SiteQuality
SIO_000300: 5.2e-2

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8301
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 4
allele frequency: 3.461405330564209e-4
allele num: 11556
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 20
allele frequency: 1.924557351809084e-3
allele num: 10392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.998141152485459e-5
allele num: 66708
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.059871530723549e-5
allele num: 16502
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.681e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

QD
type: SiteQuality
SIO_000300: 1.281e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.01e-1

DP
type: SiteQuality
SIO_000300: 1.759049e6

VQSLOD
type: SiteQuality
SIO_000300: 5.65e0

MQ
type: SiteQuality
SIO_000300: 5.993e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.96e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.12e-1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49902563333833e-5
allele num: 66710
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.758333e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.05e-2

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 2.66e0

FS
type: SiteQuality
SIO_000300: 1.691e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.43e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.066e0

VQSLOD
type: SiteQuality
SIO_000300: -4.086e0

QD
type: SiteQuality
SIO_000300: 5.62e0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2011
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66716
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.56e-1

ClippingRankSum
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SIO_000300: -2.06e0

MQRankSum
type: SiteQuality
SIO_000300: -3.31e-1

FS
type: SiteQuality
SIO_000300: 7.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.15e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -5.241e0

DP
type: SiteQuality
SIO_000300: 1.75859e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.34e-1

QD
type: SiteQuality
SIO_000300: 1.171e1

MQ
type: SiteQuality
SIO_000300: 5.984e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.64902266043937e-5
allele num: 11562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 10
allele frequency: 6.05766900896535e-4
allele num: 16508
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.59e-2

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 2.33e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.26e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.524e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.6e-1

FS
type: SiteQuality
SIO_000300: 1.098e0

DP
type: SiteQuality
SIO_000300: 1.759109e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.535833081342606e-4
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.82e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.396e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 9.5e-1

FS
type: SiteQuality
SIO_000300: 5.92e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.56e-1

DP
type: SiteQuality
SIO_000300: 1.758978e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.76e-1

QD
type: SiteQuality
SIO_000300: 1.268e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 1.948149258204705e-4
allele num: 66730
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.457216940363008e-4
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21153380179307e-4
allele num: 16508
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.26e-2

MQ
type: SiteQuality
SIO_000300: 5.958e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.224e0

QD
type: SiteQuality
SIO_000300: 1.128e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.5e-1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.760032e6

MQRankSum
type: SiteQuality
SIO_000300: -7.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.56e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.728608470181504e-4
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
type: Population
allele count: 37
allele frequency: 5.545064892245902e-4
allele num: 66726
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.882952142994427e-4
allele num: 10406
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.762202e6

VQSLOD
type: SiteQuality
SIO_000300: 3.8e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.04e-1

BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 4.39e-1

QD
type: SiteQuality
SIO_000300: 1.278e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.64e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 1.101e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

South Asian
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allele count: 6
allele frequency: 3.634161114476075e-4
allele num: 16510
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
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DP
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498756032493031e-5
allele num: 66722
num of homozygotes: 0

Other
type: Population
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South Asian
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East Asian
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele num: 11572
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African
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allele num: 10404
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
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MQRankSum
type: SiteQuality
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ReadPosRankSum
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FS
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MQ
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VQSLOD
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QD
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
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allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
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allele count: 29
allele frequency: 4.346262214495534e-4
allele num: 66724
num of homozygotes: 0

South Asian
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allele frequency: 1.211387038158692e-4
allele num: 16510
num of homozygotes: 0

Latino
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allele count: 1
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allele num: 11568
num of homozygotes: 0

East Asian
type: Population
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.761656e6

FS
type: SiteQuality
SIO_000300: 5.18e-1

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.976e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.89e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
type: Population
allele count: 0
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allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
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European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.995024129972123e-5
allele num: 66722
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South Asian
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East Asian
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Other
type: Population
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BaseQRankSum
type: SiteQuality
SIO_000300: 3.29e0

QD
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MQ
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
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DP
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MQRankSum
type: SiteQuality
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ClippingRankSum
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.73e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.157943492357573e-4
allele num: 8636
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10406
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66700
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.904e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 1.8153e1

DP
type: SiteQuality
SIO_000300: 1.758128e6

MQRankSum
type: SiteQuality
SIO_000300: 2.54e-1

ClippingRankSum
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 2.31e0

QD
type: SiteQuality
SIO_000300: 1.949e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 2.31696014828545e-4
allele num: 8632
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16328
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.501095799933952e-5
allele num: 66618
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.61e-1

DP
type: SiteQuality
SIO_000300: 1.748797e6

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
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MQRankSum
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MQ
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
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SIO_000300: -6.62e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.501321162623108e-5
allele num: 66608
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16330
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10404
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.51e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -3.655e0

ClippingRankSum
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SIO_000300: 2.1e0

InbreedingCoeff
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SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 5.32e0

FS
type: SiteQuality
SIO_000300: 1.304e1

MQRankSum
type: SiteQuality
SIO_000300: 8.2e-2

DP
type: SiteQuality
SIO_000300: 1.747576e6

ReadPosRankSum
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SIO_000300: -1.854e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
allele num: 16214
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.116071428571429e-3
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66580
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
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Latino
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allele frequency: 3.462004500605851e-4
allele num: 11554
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.0306e1

MQRankSum
type: SiteQuality
SIO_000300: -7.4e-2

BaseQRankSum
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SIO_000300: -1.177e0

MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 7.4e-2

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.739676e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159017153453871e-4
allele num: 8628
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.515e0

MQRankSum
type: SiteQuality
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ClippingRankSum
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SIO_000300: 1.72e0

MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.415e1

VQSLOD
type: SiteQuality
SIO_000300: 6.53e-1

FS
type: SiteQuality
SIO_000300: 5.604e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66528
num of homozygotes: 0

Other
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East Asian
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allele frequency: 0.0e0
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African
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allele num: 10404
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ClippingRankSum
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MQ
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MQRankSum
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VQSLOD
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DP
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InbreedingCoeff
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BaseQRankSum
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FS
type: SiteQuality
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

Other
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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South Asian
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European (Non-Finnish)
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allele num: 66528
num of homozygotes: 0

QD
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
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ReadPosRankSum
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MQ
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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Latino
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Other
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European (Finnish)
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allele frequency: 0.0e0
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African
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East Asian
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South Asian
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BaseQRankSum
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InbreedingCoeff
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MQ
type: SiteQuality
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ReadPosRankSum
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FS
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MQRankSum
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QD
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DP
type: SiteQuality
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ClippingRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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South Asian
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Other
type: Population
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Latino
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East Asian
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African
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MQ
type: SiteQuality
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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FS
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MQRankSum
type: SiteQuality
SIO_000300: 9.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.59e-1

QD
type: SiteQuality
SIO_000300: 1.253e1

DP
type: SiteQuality
SIO_000300: 1.707818e6

GenotypeQuality
all individuals: 1381
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7704
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 555
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1408
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3361
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3300
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26808
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.409726596950989e-4
allele num: 15874
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.010053578953705e-5
allele num: 66444
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.253e1

MQRankSum
type: SiteQuality
SIO_000300: 9.9e-2

DP
type: SiteQuality
SIO_000300: 1.707818e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.894e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 5.963e1

VQSLOD
type: SiteQuality
SIO_000300: 3.75e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.59e-1

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3300
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7503
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1289
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1557
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1991
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 646
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 569
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1498
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7509
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 318
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66374
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.371861858034918e-5
allele num: 15694
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.34e0

VQSLOD
type: SiteQuality
SIO_000300: 1.66e-1

MQ
type: SiteQuality
SIO_000300: 5.917e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.2e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.120000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -8.120000000000001e-1

QD
type: SiteQuality
SIO_000300: 9.300000000000001e0

DP
type: SiteQuality
SIO_000300: 1.68597e6

GenotypeQuality
all individuals: 1769
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3267
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1235
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 835
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3311
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 408
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2396
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1122
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1989
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17375
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66166
num of homozygotes: 0

African
type: Population
allele count: 11
allele frequency: 1.059934476777799e-3
allele num: 10378
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.683570684265369e-5
allele num: 11516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15196
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.27e0

MQRankSum
type: SiteQuality
SIO_000300: 2.03e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.35e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.66e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

FS
type: SiteQuality
SIO_000300: 3.656e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.4e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.682555e6

QD
type: SiteQuality
SIO_000300: 1.554e1

GenotypeQuality
all individuals: 705
bin: 9.25e1
variant carriers: 8

GenotypeQuality
all individuals: 1050
bin: 8.25e1
variant carriers: 11

GenotypeQuality
all individuals: 1089
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 3196
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3112
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1075
bin: 7.25e1
variant carriers: 6

GenotypeQuality
all individuals: 7485
bin: 9.75e1
variant carriers: 849

GenotypeQuality
all individuals: 16436
bin: 6.25e1
variant carriers: 3

GenotypeQuality
all individuals: 1346
bin: 7.75e1
variant carriers: 11

GenotypeQuality
all individuals: 5942
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 2997
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 398
bin: 5.75e1
variant carriers: 5

European (Non-Finnish)
type: Population
allele count: 539
allele frequency: 8.961228968544257e-3
allele num: 60148
num of homozygotes: 2

Latino
type: Population
allele count: 24
allele frequency: 2.309024437175294e-3
allele num: 10394
num of homozygotes: 0

East Asian
type: Population
allele count: 205
allele frequency: 2.621483375959079e-2
allele num: 7820
num of homozygotes: 3

African
type: Population
allele count: 17
allele frequency: 1.898168825368468e-3
allele num: 8956
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 70
allele frequency: 1.225061253062653e-2
allele num: 5714
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 5.382131324004305e-4
allele num: 14864
num of homozygotes: 0

Other
type: Population
allele count: 15
allele frequency: 1.833740831295844e-2
allele num: 818
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.4e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.5e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.7e-3

QD
type: SiteQuality
SIO_000300: 1.357e1

DP
type: SiteQuality
SIO_000300: 1.521183e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.429e0

VQSLOD
type: SiteQuality
SIO_000300: 5.87e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 6759
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 579
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 734
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1409
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2769
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1349
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4800
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1160
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3522
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 545
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1196
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1489
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9032
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.545628102329134e-5
allele num: 10476
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7934
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14954
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5774
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60646
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.27e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.52e-1

DP
type: SiteQuality
SIO_000300: 1.584592e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.89e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.366e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -3.4e-1

GenotypeQuality
all individuals: 151
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1286
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1232
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1225
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 441
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1528
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6764
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 737
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1194
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 558
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14982
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9058
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 824
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5784
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7962
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60798
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.523809523809524e-5
allele num: 10500
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.339e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.09e-1

FS
type: SiteQuality
SIO_000300: 6.193e0

DP
type: SiteQuality
SIO_000300: 1.592982e6

QD
type: SiteQuality
SIO_000300: 1.184e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -8.68e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.01e-1