7-23757195-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23757195
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23757195
    reference: chr 7
allele count: 1
allele frequency: 1.023227258774174e-5
allele num: 97730
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.246C>G
  hgvsp: ENSP00000348132.3:p.Asn82Lys
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.177C>G
  hgvsp: ENSP00000389340.2:p.Asn59Lys
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.114C>G
  hgvsp: ENSP00000414087.1:p.Asn38Lys
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.177C>G
  hgvsp: ENSP00000406146.1:p.Asn59Lys
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.246C>G
  hgvsp: ENSP00000411852.2:p.Asn82Lys
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000461866
  gene symbol: STK31
  hgvsc: ENST00000461866.1:n.220C>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000398413
  ensembl transcript: ENST00000444333
  gene symbol: STK31
  hgvsc: ENST00000444333.2:c.177C>G
  hgvsp: ENSP00000398413.2:p.Asn59Lys
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.272C>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.177C>G
  hgvsp: ENSP00000346660.3:p.Asn59Lys
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16631
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12527
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11294
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11003
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1803
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3383
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 705
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asn82Lys
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum

7-23757213-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23757213
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23757213
    reference: chr 7
allele count: 2
allele frequency: 2.347197446249178e-5
allele num: 85208
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.249+15T>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000398413
  ensembl transcript: ENST00000444333
  gene symbol: STK31
  hgvsc: ENST00000444333.2:c.180+15T>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.275+15T>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.117+15T>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.180+15T>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.249+15T>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.180+15T>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000461866
  gene symbol: STK31
  hgvsc: ENST00000461866.1:n.223+15T>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.180+15T>A
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15458
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2366
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5691
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2712
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8406
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21017
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1824
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2465
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 529
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 568
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1285
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3502
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: MQ

7-23757223-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23757223
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23757223
    reference: chr 7
allele count: 1
allele frequency: 1.259826647853255e-5
allele num: 79376
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.180+25T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000461866
  gene symbol: STK31
  hgvsc: ENST00000461866.1:n.223+25T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000398413
  ensembl transcript: ENST00000444333
  gene symbol: STK31
  hgvsc: ENST00000444333.2:c.180+25T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.180+25T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.249+25T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.249+25T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.117+25T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.180+25T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.275+25T>C
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22501
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1500
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4083
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3902
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3729
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5174
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16562
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7587
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4205
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

7-23757238-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23757238
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23757238
    reference: chr 7
allele count: 22
allele frequency: 3.296077667575585e-4
allele num: 66746
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.249+40G>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.117+40G>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000461866
  gene symbol: STK31
  hgvsc: ENST00000461866.1:n.223+40G>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.249+40G>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000398413
  ensembl transcript: ENST00000444333
  gene symbol: STK31
  hgvsc: ENST00000444333.2:c.180+40G>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.275+40G>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.180+40G>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.180+40G>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.180+40G>T
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18834
  bin: 1.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3136
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5337
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6139
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2553
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20129
  bin: 7.5e0
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2943
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8157
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1120
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3569
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum

7-23766813-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23766813
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23766813
    reference: chr 7
allele count: 1
allele frequency: 8.928093137867613e-6
allele num: 112006
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.250-47A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000461866
  gene symbol: STK31
  hgvsc: ENST00000461866.1:n.224-47A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000398413
  ensembl transcript: ENST00000444333
  gene symbol: STK31
  hgvsc: ENST00000444333.2:c.181-47A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.775-47A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.181-47A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.276-47A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.181-47A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.191-47A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.118-47A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.250-47A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.191-47A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.181-47A>G
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12062
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2074
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11655
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3998
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6419
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1772
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12037
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3223
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1418
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: African
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/7-23766819-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23766819
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23766819
    reference: chr 7
allele count: 1
allele frequency: 8.925543119298809e-6
allele num: 112038
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.181-41C>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.276-41C>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.181-41C>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000398413
  ensembl transcript: ENST00000444333
  gene symbol: STK31
  hgvsc: ENST00000444333.2:c.181-41C>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.191-41C>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.250-41C>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.191-41C>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.118-41C>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.250-41C>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000461866
  gene symbol: STK31
  hgvsc: ENST00000461866.1:n.224-41C>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.775-41C>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.181-41C>A
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6883
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1418
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3342
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2082
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3940
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8722
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15381
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11185
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1773
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff

7-23766825-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23766825
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23766825
    reference: chr 7
allele count: 175
allele frequency: 1.553429083743143e-3
allele num: 112654
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.181-35A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.191-35A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000461866
  gene symbol: STK31
  hgvsc: ENST00000461866.1:n.224-35A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.775-35A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.181-35A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000398413
  ensembl transcript: ENST00000444333
  gene symbol: STK31
  hgvsc: ENST00000444333.2:c.181-35A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.250-35A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.181-35A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.250-35A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.276-35A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.191-35A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.118-35A>G
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9874
  bin: 1.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1419
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 9.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7443
  bin: 2.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19343
  bin: 2.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 3930
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1777
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3436
  bin: 3.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 5505
  bin: 1.75e1
  variant carriers: 38
genotype quality: GenotypeQuality
num of homozygotes: 1
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

7-23766832-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23766832
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23766832
    reference: chr 7
allele count: 6
allele frequency: 5.280946345585129e-5
allele num: 113616
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.276-28G>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.775-28G>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.250-28G>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.191-28G>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000398413
  ensembl transcript: ENST00000444333
  gene symbol: STK31
  hgvsc: ENST00000444333.2:c.181-28G>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.181-28G>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.181-28G>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.118-28G>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.250-28G>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.191-28G>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000461866
  gene symbol: STK31
  hgvsc: ENST00000461866.1:n.224-28G>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.181-28G>C
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2850
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 24029
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6895
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8545
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3575
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2104
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3709
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1780
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD

7-23766840-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23766840
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23766840
    reference: chr 7
allele count: 1
allele frequency: 8.679500755116566e-6
allele num: 115214
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000461866
  gene symbol: STK31
  hgvsc: ENST00000461866.1:n.224-20G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.775-20G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.191-20G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.250-20G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.250-20G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.276-20G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.181-20G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000398413
  ensembl transcript: ENST00000444333
  gene symbol: STK31
  hgvsc: ENST00000444333.2:c.181-20G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.118-20G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.181-20G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.181-20G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.191-20G>A
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4504
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27241
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9533
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1780
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2122
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1539
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3892
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2920
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

7-23766889-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23766889
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23766889
    reference: chr 7
allele count: 1
allele frequency: 8.279379377721846e-6
allele num: 120782
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.279G>T
  hgvsp: ENSP00000411852.2:p.Gln93His
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.279G>T
  hgvsp: ENSP00000348132.3:p.Gln93His
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.220G>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.210G>T
  hgvsp: ENSP00000406146.1:p.Gln70His
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.147G>T
  hgvsp: ENSP00000414087.1:p.Gln49His
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000461866
  gene symbol: STK31
  hgvsc: ENST00000461866.1:n.253G>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.804G>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000398413
  ensembl transcript: ENST00000444333
  gene symbol: STK31
  hgvsc: ENST00000444333.2:c.210G>T
  hgvsp: ENSP00000398413.2:p.Gln70His
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.305G>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.210G>T
  hgvsp: ENSP00000346660.3:p.Gln70His
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.210G>T
  hgvsp: ENSP00000389340.2:p.Gln70His
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.220G>T
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11996
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4419
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32694
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2162
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln93His
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

7-23766892-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23766892
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23766892
    reference: chr 7
allele count: 3
allele frequency: 2.483279253029601e-5
allele num: 120808
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.282T>C
  hgvsp: ENST00000433467.2:c.282T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.213T>C
  hgvsp: ENST00000428484.1:c.213T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.807T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.150T>C
  hgvsp: ENST00000422637.1:c.150T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.213T>C
  hgvsp: ENST00000354639.3:c.213T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000461866
  gene symbol: STK31
  hgvsc: ENST00000461866.1:n.256T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.282T>C
  hgvsp: ENST00000355870.3:c.282T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000398413
  ensembl transcript: ENST00000444333
  gene symbol: STK31
  hgvsc: ENST00000444333.2:c.213T>C
  hgvsp: ENST00000444333.2:c.213T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.213T>C
  hgvsp: ENST00000456014.2:c.213T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.308T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.223T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.223T>C
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1787
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32674
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4422
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2165
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys94Cys
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: T
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

7-23766901-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23766901
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23766901
    reference: chr 7
allele count: 2
allele frequency: 1.654670306941342e-5
allele num: 120870
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.816A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.291A>G
  hgvsp: ENST00000355870.3:c.291A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.222A>G
  hgvsp: ENST00000428484.1:c.222A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.291A>G
  hgvsp: ENST00000433467.2:c.291A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.159A>G
  hgvsp: ENST00000422637.1:c.159A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000461866
  gene symbol: STK31
  hgvsc: ENST00000461866.1:n.265A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.222A>G
  hgvsp: ENST00000456014.2:c.222A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000398413
  ensembl transcript: ENST00000444333
  gene symbol: STK31
  hgvsc: ENST00000444333.2:c.222A>G
  hgvsp: ENST00000444333.2:c.222A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.222A>G
  hgvsp: ENST00000354639.3:c.222A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.317A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.232A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.232A>G
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32580
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12142
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2164
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1787
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg97Arg
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/7-23766910-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23766910
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23766910
    reference: chr 7
allele count: 1
allele frequency: 8.273214640280627e-6
allele num: 120872
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.231A>C
  hgvsp: ENST00000456014.2:c.231A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000461866
  gene symbol: STK31
  hgvsc: ENST00000461866.1:n.274A>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.825A>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.300A>C
  hgvsp: ENST00000433467.2:c.300A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.326A>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.241A>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.300A>C
  hgvsp: ENST00000355870.3:c.300A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000398413
  ensembl transcript: ENST00000444333
  gene symbol: STK31
  hgvsc: ENST00000444333.2:c.231A>C
  hgvsp: ENST00000444333.2:c.231A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.168A>C
  hgvsp: ENST00000422637.1:c.168A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.241A>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.231A>C
  hgvsp: ENST00000354639.3:c.231A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.231A>C
  hgvsp: ENST00000428484.1:c.231A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4434
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32462
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2164
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12217
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val100Val
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: African
population: East Asian
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP

7-23766918-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23766918
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23766918
    reference: chr 7
allele count: 1
allele frequency: 8.27841981522567e-6
allele num: 120796
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.308T>G
  hgvsp: ENSP00000348132.3:p.Ile103Ser
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.249T>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.239T>G
  hgvsp: ENSP00000406146.1:p.Ile80Ser
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.239T>G
  hgvsp: ENSP00000389340.2:p.Ile80Ser
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.239T>G
  hgvsp: ENSP00000346660.3:p.Ile80Ser
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.833T>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.176T>G
  hgvsp: ENSP00000414087.1:p.Ile59Ser
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.249T>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000461866
  gene symbol: STK31
  hgvsc: ENST00000461866.1:n.282T>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.308T>G
  hgvsp: ENSP00000411852.2:p.Ile103Ser
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000398413
  ensembl transcript: ENST00000444333
  gene symbol: STK31
  hgvsc: ENST00000444333.2:c.239T>G
  hgvsp: ENSP00000398413.2:p.Ile80Ser
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.334T>G
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2166
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32175
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1787
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12271
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4441
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile103Ser
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD

7-23766922-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23766922
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23766922
    reference: chr 7
allele count: 2
allele frequency: 1.656643970644269e-5
allele num: 120726
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000398413
  ensembl transcript: ENST00000444333
  gene symbol: STK31
  hgvsc: ENST00000444333.2:c.243C>T
  hgvsp: ENST00000444333.2:c.243C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.243C>T
  hgvsp: ENST00000456014.2:c.243C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.312C>T
  hgvsp: ENST00000355870.3:c.312C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.180C>T
  hgvsp: ENST00000422637.1:c.180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.312C>T
  hgvsp: ENST00000433467.2:c.312C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.243C>T
  hgvsp: ENST00000428484.1:c.243C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.243C>T
  hgvsp: ENST00000354639.3:c.243C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000461866
  gene symbol: STK31
  hgvsc: ENST00000461866.1:n.286C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.338C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.253C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.837C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.253C>T
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4456
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12273
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1787
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32012
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2169
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile104Ile
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP

7-23766924-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23766924
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23766924
    reference: chr 7
allele count: 6
allele frequency: 4.972073520393788e-5
allele num: 120674
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.245G>A
  hgvsp: ENSP00000406146.1:p.Ser82Asn
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000398413
  ensembl transcript: ENST00000444333
  gene symbol: STK31
  hgvsc: ENST00000444333.2:c.245G>A
  hgvsp: ENSP00000398413.2:p.Ser82Asn
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.255G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.314G>A
  hgvsp: ENSP00000348132.3:p.Ser105Asn
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.340G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.255G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.245G>A
  hgvsp: ENSP00000389340.2:p.Ser82Asn
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.314G>A
  hgvsp: ENSP00000411852.2:p.Ser105Asn
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.245G>A
  hgvsp: ENSP00000346660.3:p.Ser82Asn
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.182G>A
  hgvsp: ENSP00000414087.1:p.Ser61Asn
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.839G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000461866
  gene symbol: STK31
  hgvsc: ENST00000461866.1:n.288G>A
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12300
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1787
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31837
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser105Asn
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD

7-23766925-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23766925
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23766925
    reference: chr 7
allele count: 6
allele frequency: 4.972073520393788e-5
allele num: 120674
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.840C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.341C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.315C>T
  hgvsp: ENST00000433467.2:c.315C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.246C>T
  hgvsp: ENST00000456014.2:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.246C>T
  hgvsp: ENST00000428484.1:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.256C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.315C>T
  hgvsp: ENST00000355870.3:c.315C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000398413
  ensembl transcript: ENST00000444333
  gene symbol: STK31
  hgvsc: ENST00000444333.2:c.246C>T
  hgvsp: ENST00000444333.2:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000461866
  gene symbol: STK31
  hgvsc: ENST00000461866.1:n.289C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.246C>T
  hgvsp: ENST00000354639.3:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.256C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.183C>T
  hgvsp: ENST00000422637.1:c.183C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4477
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1790
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2168
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31788
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12323
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ser105Ser
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ

7-23766926-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23766926
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23766926
    reference: chr 7
allele count: 3
allele frequency: 2.486448853747078e-5
allele num: 120654
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.247G>A
  hgvsp: ENSP00000406146.1:p.Val83Ile
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.316G>A
  hgvsp: ENSP00000348132.3:p.Val106Ile
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.257G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.247G>A
  hgvsp: ENSP00000389340.2:p.Val83Ile
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.342G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000461866
  gene symbol: STK31
  hgvsc: ENST00000461866.1:n.290G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.841G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000398413
  ensembl transcript: ENST00000444333
  gene symbol: STK31
  hgvsc: ENST00000444333.2:c.247G>A
  hgvsp: ENSP00000398413.2:p.Val83Ile
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.316G>A
  hgvsp: ENSP00000411852.2:p.Val106Ile
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.184G>A
  hgvsp: ENSP00000414087.1:p.Val62Ile
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.257G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.247G>A
  hgvsp: ENSP00000346660.3:p.Val83Ile
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12340
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31717
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2165
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1428
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4473
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val106Ile
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

http://identifiers.org/exac.variant/7-23766942-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23766942
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23766942
    reference: chr 7
allele count: 14
allele frequency: 1.166822242965729e-4
allele num: 119984
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.849+8A>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.324+8A>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.324+8A>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.350+8A>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.255+8A>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.255+8A>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000398413
  ensembl transcript: ENST00000444333
  gene symbol: STK31
  hgvsc: ENST00000444333.2:c.255+8A>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.255+8A>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.265+8A>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000461866
  gene symbol: STK31
  hgvsc: ENST00000461866.1:n.306A>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.192+8A>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.265+8A>C
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1460
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12123
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1787
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2172
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29912
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4446
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.324+8A>C
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum

7-23766951-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23766951
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23766951
    reference: chr 7
allele count: 1
allele frequency: 8.403220113947665e-6
allele num: 119002
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.255+17T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.255+17T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000398413
  ensembl transcript: ENST00000444333
  gene symbol: STK31
  hgvsc: ENST00000444333.2:c.255+17T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.265+17T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.192+17T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.849+17T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000461866
  gene symbol: STK31
  hgvsc: ENST00000461866.1:n.315T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.265+17T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.324+17T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.350+17T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.255+17T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.324+17T>C
  variant of: http://identifiers.org/hgnc/11407
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26260
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1777
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12047
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3710
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1803
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4646
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

7-23766953-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23766953
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23766953
    reference: chr 7
allele count: 1
allele frequency: 8.412126922171002e-6
allele num: 118876
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000398413
  ensembl transcript: ENST00000444333
  gene symbol: STK31
  hgvsc: ENST00000444333.2:c.255+19A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000461866
  gene symbol: STK31
  hgvsc: ENST00000461866.1:n.317A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.350+19A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.192+19A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.265+19A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.255+19A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.255+19A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.849+19A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.255+19A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.324+19A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.265+19A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.324+19A>G
  variant of: http://identifiers.org/hgnc/11407
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1806
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25504
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1938
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2234
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1428
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4744
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12060
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4125
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: A
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

7-23766954-G-GT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23766954
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23766955
    reference: chr 7
allele count: 129
allele frequency: 1.193648678658672e-3
allele num: 108072
alternate allele: GT
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.324+29dupT
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000398413
  ensembl transcript: ENST00000444333
  gene symbol: STK31
  hgvsc: ENST00000444333.2:c.255+29dupT
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.255+29dupT
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.849+29dupT
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.255+29dupT
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.192+29dupT
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.350+29dupT
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000461866
  gene symbol: STK31
  hgvsc: ENST00000461866.1:n.327dupT
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.265+29dupT
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.265+29dupT
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.324+29dupT
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.255+29dupT
  variant of: http://identifiers.org/hgnc/11407
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 10884
  bin: 2.75e1
  variant carriers: 67
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5207
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3452
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2329
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 1.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 4095
  bin: 3.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 17911
  bin: 2.25e1
  variant carriers: 65
genotype depth: GenotypeDepth
  all individuals: 1498
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6469
  bin: 3.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD

7-23766954-GT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23766954
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23766953
    reference: chr 7
allele count: 179
allele frequency: 1.65630320527056e-3
allele num: 108072
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000398413
  ensembl transcript: ENST00000444333
  gene symbol: STK31
  hgvsc: ENST00000444333.2:c.255+29delT
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.265+29delT
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.350+29delT
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000461866
  gene symbol: STK31
  hgvsc: ENST00000461866.1:n.327delT
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.255+29delT
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.192+29delT
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.265+29delT
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.255+29delT
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.849+29delT
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.324+29delT
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.255+29delT
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.324+29delT
  variant of: http://identifiers.org/hgnc/11407
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10884
  bin: 2.75e1
  variant carriers: 85
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17911
  bin: 2.25e1
  variant carriers: 71
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2329
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 1.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 4095
  bin: 3.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 5207
  bin: 1.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3452
  bin: 4.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 9.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 6469
  bin: 3.25e1
  variant carriers: 34
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: GT
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff

7-23766954-GTT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23766954
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23766952
    reference: chr 7
allele count: 2
allele frequency: 1.850618106447554e-5
allele num: 108072
alternate allele: G
canonical: false
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17911
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4095
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1498
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2329
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10884
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3452
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6469
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5207
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1376
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2836
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 851
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1116
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1783
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1298
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 930
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1226
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2331
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1163
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1207
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 929
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22945
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2473
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3395
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 579
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1091
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5265
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 881
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7024
  bin: 9.75e1
  variant carriers: 2
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 2
  allele frequency: 2.632964718272775e-4
  allele num: 7596
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6154
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 59038
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 14782
  num of homozygotes: 0
population: Latino
population: Other
population: African
reference allele: GTT
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum

7-23766955-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23766955
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23766955
    reference: chr 7
allele count: 2
allele frequency: 1.854083619171225e-5
allele num: 107870
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.324+21T>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.192+21T>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.255+21T>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.350+21T>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000461866
  gene symbol: STK31
  hgvsc: ENST00000461866.1:n.319T>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.265+21T>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000398413
  ensembl transcript: ENST00000444333
  gene symbol: STK31
  hgvsc: ENST00000444333.2:c.255+21T>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.324+21T>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.255+21T>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.265+21T>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.255+21T>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.849+21T>G
  variant of: http://identifiers.org/hgnc/11407
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6489
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4081
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2643
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2188
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17269
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11061
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5334
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3598
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ

7-23766965-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23766965
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23766965
    reference: chr 7
allele count: 1
allele frequency: 8.572653236176597e-6
allele num: 116650
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.324+31C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.255+31C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.192+31C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.255+31C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000461866
  gene symbol: STK31
  hgvsc: ENST00000461866.1:n.329C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.350+31C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000398413
  ensembl transcript: ENST00000444333
  gene symbol: STK31
  hgvsc: ENST00000444333.2:c.255+31C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.255+31C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.265+31C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.324+31C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.265+31C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.849+31C>T
  variant of: http://identifiers.org/hgnc/11407
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12682
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9671
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5961
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14472
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2358
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1847
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5258
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: East Asian
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff

7-23766977-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23766977
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23766977
    reference: chr 7
allele count: 67
allele frequency: 5.870189948832971e-4
allele num: 114136
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.192+43T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.255+43T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.265+43T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000461866
  gene symbol: STK31
  hgvsc: ENST00000461866.1:n.341T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.265+43T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.324+43T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.324+43T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000398413
  ensembl transcript: ENST00000444333
  gene symbol: STK31
  hgvsc: ENST00000444333.2:c.255+43T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.350+43T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.255+43T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.849+43T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.255+43T>C
  variant of: http://identifiers.org/hgnc/11407
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12285
  bin: 2.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 13845
  bin: 1.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2230
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3669
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2850
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7213
  bin: 2.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10103
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1434
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
num of homozygotes: 1
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: T
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum

7-23766979-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23766979
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23766979
    reference: chr 7
allele count: 21
allele frequency: 1.835022719328906e-4
allele num: 114440
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.265+45T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.255+45T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000398413
  ensembl transcript: ENST00000444333
  gene symbol: STK31
  hgvsc: ENST00000444333.2:c.255+45T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.324+45T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.324+45T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.350+45T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.265+45T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.255+45T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.849+45T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000461866
  gene symbol: STK31
  hgvsc: ENST00000461866.1:n.343T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.192+45T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.255+45T>C
  variant of: http://identifiers.org/hgnc/11407
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13824
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1432
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7225
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3593
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12329
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2891
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10121
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2222
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

7-23766980-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23766980
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23766980
    reference: chr 7
allele count: 2
allele frequency: 1.758149020710995e-5
allele num: 113756
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.255+46A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.255+46A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.350+46A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.192+46A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.324+46A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.265+46A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000398413
  ensembl transcript: ENST00000444333
  gene symbol: STK31
  hgvsc: ENST00000444333.2:c.255+46A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000461866
  gene symbol: STK31
  hgvsc: ENST00000461866.1:n.344A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.255+46A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.849+46A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.265+46A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.324+46A>G
  variant of: http://identifiers.org/hgnc/11407
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1433
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3093
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9984
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12956
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6783
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2210
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1787
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3411
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13773
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

7-23768659-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23768659
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23768659
    reference: chr 7
allele count: 1
allele frequency: 8.649471517290293e-6
allele num: 115614
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.325-51G>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.256-51G>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.266-51G>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.256-51G>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.266-51G>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.351-51G>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000398413
  ensembl transcript: ENST00000444333
  gene symbol: STK31
  hgvsc: ENST00000444333.2:c.256-51G>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.256-51G>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.325-51G>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.850-51G>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.193-51G>T
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2410
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12301
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25283
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3207
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8106
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1476
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1478
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: DP

7-23768668-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23768668
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23768668
    reference: chr 7
allele count: 23
allele frequency: 1.987418775058759e-4
allele num: 115728
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.266-42A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.325-42A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.256-42A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.351-42A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.193-42A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.266-42A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.325-42A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.256-42A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.256-42A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000398413
  ensembl transcript: ENST00000444333
  gene symbol: STK31
  hgvsc: ENST00000444333.2:c.256-42A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.850-42A>G
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12256
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2413
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3189
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1472
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8652
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2408
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25400
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2080
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

7-23768676-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23768676
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23768676
    reference: chr 7
allele count: 1
allele frequency: 8.620689655172414e-6
allele num: 116000
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.256-34G>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.325-34G>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.266-34G>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.256-34G>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.850-34G>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.351-34G>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.325-34G>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000398413
  ensembl transcript: ENST00000444333
  gene symbol: STK31
  hgvsc: ENST00000444333.2:c.256-34G>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.193-34G>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.266-34G>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.256-34G>T
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12274
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25490
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3187
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2383
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2259
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9144
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: African
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

7-23768685-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23768685
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23768685
    reference: chr 7
allele count: 8
allele frequency: 6.867424372489098e-5
allele num: 116492
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.256-25C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.256-25C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.325-25C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.850-25C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.266-25C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.325-25C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000398413
  ensembl transcript: ENST00000444333
  gene symbol: STK31
  hgvsc: ENST00000444333.2:c.256-25C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.351-25C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.266-25C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.193-25C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.256-25C>T
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12282
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25629
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2231
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9880
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3187
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4451
  bin: 9.75e1
  variant carriers: 8
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQ
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

7-23768686-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23768686
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23768686
    reference: chr 7
allele count: 1
allele frequency: 8.566484486096596e-6
allele num: 116734
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.256-24G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.850-24G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.256-24G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.266-24G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.256-24G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.193-24G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.325-24G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.325-24G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000398413
  ensembl transcript: ENST00000444333
  gene symbol: STK31
  hgvsc: ENST00000444333.2:c.256-24G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.351-24G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.266-24G>A
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12281
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10078
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1675
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3186
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2170
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25662
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 601
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

7-23768687-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23768687
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23768687
    reference: chr 7
allele count: 3
allele frequency: 2.567130461570057e-5
allele num: 116862
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.256-23T>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000398413
  ensembl transcript: ENST00000444333
  gene symbol: STK31
  hgvsc: ENST00000444333.2:c.256-23T>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.850-23T>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.266-23T>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.325-23T>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.325-23T>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.193-23T>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.351-23T>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.266-23T>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.256-23T>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.256-23T>A
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12281
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25678
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3184
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1584
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10223
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4445
  bin: 9.75e1
  variant carriers: 3
num of homozygotes: 0
population: Other
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: DP

7-23768710-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23768710
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23768710
    reference: chr 7
allele count: 1
allele frequency: 8.367920739054759e-6
allele num: 119504
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.193T>C
  hgvsp: ENSP00000414087.1:p.Cys65Arg
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.256T>C
  hgvsp: ENSP00000406146.1:p.Cys86Arg
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.325T>C
  hgvsp: ENSP00000411852.2:p.Cys109Arg
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.256T>C
  hgvsp: ENSP00000346660.3:p.Cys86Arg
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.325T>C
  hgvsp: ENSP00000348132.3:p.Cys109Arg
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.850T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.256T>C
  hgvsp: ENSP00000389340.2:p.Cys86Arg
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.266T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000398413
  ensembl transcript: ENST00000444333
  gene symbol: STK31
  hgvsc: ENST00000444333.2:c.256T>C
  hgvsp: ENSP00000398413.2:p.Cys86Arg
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.351T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.266T>C
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3185
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12277
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12340
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26119
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1462
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys109Arg
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

7-23768724-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23768724
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23768724
    reference: chr 7
allele count: 1
allele frequency: 8.292836647703714e-6
allele num: 120586
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000398413
  ensembl transcript: ENST00000444333
  gene symbol: STK31
  hgvsc: ENST00000444333.2:c.270C>G
  hgvsp: ENSP00000398413.2:p.Tyr90Ter
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.280C>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.207C>G
  hgvsp: ENSP00000414087.1:p.Tyr69Ter
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.365C>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.864C>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.339C>G
  hgvsp: ENSP00000411852.2:p.Tyr113Ter
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.270C>G
  hgvsp: ENSP00000406146.1:p.Tyr90Ter
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.339C>G
  hgvsp: ENSP00000348132.3:p.Tyr113Ter
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.270C>G
  hgvsp: ENSP00000346660.3:p.Tyr90Ter
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.280C>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.270C>G
  hgvsp: ENSP00000389340.2:p.Tyr90Ter
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12430
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3192
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26424
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12737
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr113Ter
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff

7-23768725-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23768725
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23768725
    reference: chr 7
allele count: 1
allele frequency: 8.287063893262618e-6
allele num: 120670
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.271A>G
  hgvsp: ENSP00000346660.3:p.Ile91Val
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.208A>G
  hgvsp: ENSP00000414087.1:p.Ile70Val
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.281A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.271A>G
  hgvsp: ENSP00000406146.1:p.Ile91Val
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.271A>G
  hgvsp: ENSP00000389340.2:p.Ile91Val
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000398413
  ensembl transcript: ENST00000444333
  gene symbol: STK31
  hgvsc: ENST00000444333.2:c.271A>G
  hgvsp: ENSP00000398413.2:p.Ile91Val
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.340A>G
  hgvsp: ENSP00000411852.2:p.Ile114Val
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.865A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.340A>G
  hgvsp: ENSP00000348132.3:p.Ile114Val
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.281A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.366A>G
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12418
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26445
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1463
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3187
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12797
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile114Val
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ

7-23768749-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23768749
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23768749
    reference: chr 7
allele count: 1
allele frequency: 8.251914444151043e-6
allele num: 121184
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.295C>G
  hgvsp: ENSP00000406146.1:p.Leu99Val
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.295C>G
  hgvsp: ENSP00000346660.3:p.Leu99Val
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.364C>G
  hgvsp: ENSP00000411852.2:p.Leu122Val
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.305C>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.889C>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.364C>G
  hgvsp: ENSP00000348132.3:p.Leu122Val
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.232C>G
  hgvsp: ENSP00000414087.1:p.Leu78Val
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.295C>G
  hgvsp: ENSP00000389340.2:p.Leu99Val
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.305C>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.390C>G
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12966
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3185
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26688
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12463
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2443
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu122Val
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum

7-23768756-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23768756
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23768756
    reference: chr 7
allele count: 1
allele frequency: 8.248375070111188e-6
allele num: 121236
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.896G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.371G>A
  hgvsp: ENSP00000411852.2:p.Arg124Gln
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.312G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.239G>A
  hgvsp: ENSP00000414087.1:p.Arg80Gln
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.302G>A
  hgvsp: ENSP00000406146.1:p.Arg101Gln
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.302G>A
  hgvsp: ENSP00000346660.3:p.Arg101Gln
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.371G>A
  hgvsp: ENSP00000348132.3:p.Arg124Gln
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.302G>A
  hgvsp: ENSP00000389340.2:p.Arg101Gln
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.397G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.312G>A
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12458
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26711
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3184
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12971
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 536
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg124Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP

7-23768759-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23768759
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23768759
    reference: chr 7
allele count: 40
allele frequency: 3.299023489047242e-4
allele num: 121248
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.305C>T
  hgvsp: ENSP00000406146.1:p.Ser102Phe
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.315C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.899C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.374C>T
  hgvsp: ENSP00000411852.2:p.Ser125Phe
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.242C>T
  hgvsp: ENSP00000414087.1:p.Ser81Phe
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.400C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.374C>T
  hgvsp: ENSP00000348132.3:p.Ser125Phe
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.315C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.305C>T
  hgvsp: ENSP00000346660.3:p.Ser102Phe
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.305C>T
  hgvsp: ENSP00000389340.2:p.Ser102Phe
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26722
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1460
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12966
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3183
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12449
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 9.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser125Phe
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

7-23768761-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23768761
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23768761
    reference: chr 7
allele count: 1
allele frequency: 8.247694769311978e-6
allele num: 121246
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.244G>A
  hgvsp: ENSP00000414087.1:p.Asp82Asn
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.317G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.402G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.307G>A
  hgvsp: ENSP00000346660.3:p.Asp103Asn
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.317G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.901G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.376G>A
  hgvsp: ENSP00000348132.3:p.Asp126Asn
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.307G>A
  hgvsp: ENSP00000406146.1:p.Asp103Asn
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.307G>A
  hgvsp: ENSP00000389340.2:p.Asp103Asn
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.376G>A
  hgvsp: ENSP00000411852.2:p.Asp126Asn
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12461
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12967
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26739
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3187
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asp126Asn
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD

http://identifiers.org/exac.variant/7-23768771-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23768771
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23768771
    reference: chr 7
allele count: 1
allele frequency: 8.245654540057389e-6
allele num: 121276
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.412A>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.254A>C
  hgvsp: ENSP00000414087.1:p.Glu85Ala
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.317A>C
  hgvsp: ENSP00000406146.1:p.Glu106Ala
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.317A>C
  hgvsp: ENSP00000346660.3:p.Glu106Ala
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.386A>C
  hgvsp: ENSP00000348132.3:p.Glu129Ala
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.317A>C
  hgvsp: ENSP00000389340.2:p.Glu106Ala
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.386A>C
  hgvsp: ENSP00000411852.2:p.Glu129Ala
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.327A>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.911A>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.327A>C
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26752
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12462
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1460
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12956
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3185
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Glu129Ala
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP

7-23768782-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23768782
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23768782
    reference: chr 7
allele count: 2
allele frequency: 1.649375711293276e-5
allele num: 121258
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.328G>A
  hgvsp: ENSP00000346660.3:p.Glu110Lys
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.328G>A
  hgvsp: ENSP00000389340.2:p.Glu110Lys
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.397G>A
  hgvsp: ENSP00000411852.2:p.Glu133Lys
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.328G>A
  hgvsp: ENSP00000406146.1:p.Glu110Lys
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.397G>A
  hgvsp: ENSP00000348132.3:p.Glu133Lys
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.423G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.338G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.338G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.265G>A
  hgvsp: ENSP00000414087.1:p.Glu89Lys
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.922G>A
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26745
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12464
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12935
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1461
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3187
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Glu133Lys
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

7-23768798-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23768798
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23768798
    reference: chr 7
allele count: 4
allele frequency: 3.299731071917638e-5
allele num: 121222
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.344G>A
  hgvsp: ENSP00000389340.2:p.Ser115Asn
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.413G>A
  hgvsp: ENSP00000348132.3:p.Ser138Asn
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.354G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.938G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.344G>A
  hgvsp: ENSP00000346660.3:p.Ser115Asn
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.413G>A
  hgvsp: ENSP00000411852.2:p.Ser138Asn
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.344G>A
  hgvsp: ENSP00000406146.1:p.Ser115Asn
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.281G>A
  hgvsp: ENSP00000414087.1:p.Ser94Asn
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.354G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.439G>A
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12892
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12469
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1463
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26739
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3183
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 831
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ser138Asn
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD

7-23768813-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23768813
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23768813
    reference: chr 7
allele count: 1
allele frequency: 8.250416646040625e-6
allele num: 121206
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.359A>G
  hgvsp: ENSP00000406146.1:p.Tyr120Cys
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.369A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.359A>G
  hgvsp: ENSP00000346660.3:p.Tyr120Cys
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.428A>G
  hgvsp: ENSP00000348132.3:p.Tyr143Cys
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.454A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.428A>G
  hgvsp: ENSP00000411852.2:p.Tyr143Cys
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.296A>G
  hgvsp: ENSP00000414087.1:p.Tyr99Cys
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.359A>G
  hgvsp: ENSP00000389340.2:p.Tyr120Cys
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.953A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.369A>G
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12450
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1460
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3180
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12894
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26739
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 829
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Tyr143Cys
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

7-23768816-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23768816
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23768816
    reference: chr 7
allele count: 3
allele frequency: 2.475492623031983e-5
allele num: 121188
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.362A>G
  hgvsp: ENSP00000389340.2:p.Lys121Arg
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.372A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.956A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.362A>G
  hgvsp: ENSP00000406146.1:p.Lys121Arg
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.299A>G
  hgvsp: ENSP00000414087.1:p.Lys100Arg
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.362A>G
  hgvsp: ENSP00000346660.3:p.Lys121Arg
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.457A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.431A>G
  hgvsp: ENSP00000348132.3:p.Lys144Arg
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.431A>G
  hgvsp: ENSP00000411852.2:p.Lys144Arg
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.372A>G
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1460
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3179
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26750
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12873
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12437
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Lys144Arg
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD

7-23768827-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23768827
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23768827
    reference: chr 7
allele count: 1
allele frequency: 8.259820927082301e-6
allele num: 121068
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.373C>T
  hgvsp: ENST00000456014.2:c.373C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.442C>T
  hgvsp: ENST00000433467.2:c.442C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.967C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.310C>T
  hgvsp: ENST00000422637.1:c.310C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.373C>T
  hgvsp: ENST00000428484.1:c.373C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.442C>T
  hgvsp: ENST00000355870.3:c.442C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.383C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.373C>T
  hgvsp: ENST00000354639.3:c.373C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.383C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.468C>T
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12807
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26713
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3173
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12427
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40194
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Leu148Leu
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

7-23768830-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23768830
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23768830
    reference: chr 7
allele count: 1
allele frequency: 8.261458643138033e-6
allele num: 121044
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.376C>T
  hgvsp: ENSP00000406146.1:p.His126Tyr
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.445C>T
  hgvsp: ENSP00000348132.3:p.His149Tyr
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.970C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.445C>T
  hgvsp: ENSP00000411852.2:p.His149Tyr
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.376C>T
  hgvsp: ENSP00000346660.3:p.His126Tyr
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.386C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.386C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.376C>T
  hgvsp: ENSP00000389340.2:p.His126Tyr
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.471C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.313C>T
  hgvsp: ENSP00000414087.1:p.His105Tyr
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26711
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12785
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12423
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3169
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.25e1
  variant carriers: 0
hgvs: p.His149Tyr
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

7-23768831-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23768831
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23768831
    reference: chr 7
allele count: 1
allele frequency: 8.261049153242462e-6
allele num: 121050
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.387A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.446A>G
  hgvsp: ENSP00000411852.2:p.His149Arg
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.387A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.377A>G
  hgvsp: ENSP00000346660.3:p.His126Arg
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.446A>G
  hgvsp: ENSP00000348132.3:p.His149Arg
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.377A>G
  hgvsp: ENSP00000389340.2:p.His126Arg
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.314A>G
  hgvsp: ENSP00000414087.1:p.His105Arg
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.971A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.472A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.377A>G
  hgvsp: ENSP00000406146.1:p.His126Arg
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3167
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12417
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12797
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26709
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1452
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
hgvs: p.His149Arg
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD

7-23768844-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23768844
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23768844
    reference: chr 7
allele count: 1
allele frequency: 8.274309922552459e-6
allele num: 120856
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.459T>C
  hgvsp: ENST00000433467.2:c.459T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.390T>C
  hgvsp: ENST00000354639.3:c.390T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.984T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.485T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.390T>C
  hgvsp: ENST00000456014.2:c.390T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.390T>C
  hgvsp: ENST00000428484.1:c.390T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.327T>C
  hgvsp: ENST00000422637.1:c.327T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.400T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.400T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.459T>C
  hgvsp: ENST00000355870.3:c.459T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12590
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12399
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26671
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3157
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1448
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2068
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40009
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asp153Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

7-23768848-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23768848
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23768848
    reference: chr 7
allele count: 1
allele frequency: 8.283082632032337e-6
allele num: 120728
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.463G>C
  hgvsp: ENSP00000348132.3:p.Glu155Gln
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.394G>C
  hgvsp: ENSP00000406146.1:p.Glu132Gln
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.463G>C
  hgvsp: ENSP00000411852.2:p.Glu155Gln
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.489G>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.394G>C
  hgvsp: ENSP00000346660.3:p.Glu132Gln
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.988G>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.404G>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.394G>C
  hgvsp: ENSP00000389340.2:p.Glu132Gln
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.331G>C
  hgvsp: ENSP00000414087.1:p.Glu111Gln
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.404G>C
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12495
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26630
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12373
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3153
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1448
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8258
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Glu155Gln
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

7-23768851-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23768851
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23768851
    reference: chr 7
allele count: 1
allele frequency: 8.294349888855711e-6
allele num: 120564
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.466G>A
  hgvsp: ENSP00000411852.2:p.Val156Ile
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.397G>A
  hgvsp: ENSP00000406146.1:p.Val133Ile
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.397G>A
  hgvsp: ENSP00000389340.2:p.Val133Ile
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.397G>A
  hgvsp: ENSP00000346660.3:p.Val133Ile
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.407G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.991G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.407G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.466G>A
  hgvsp: ENSP00000348132.3:p.Val156Ile
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.334G>A
  hgvsp: ENSP00000414087.1:p.Val112Ile
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.492G>A
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12363
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12340
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3149
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26566
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Val156Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

7-23768858-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23768858
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23768858
    reference: chr 7
allele count: 1
allele frequency: 8.321821480285606e-6
allele num: 120166
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.341A>G
  hgvsp: ENSP00000414087.1:p.Gln114Arg
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.998A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.404A>G
  hgvsp: ENSP00000346660.3:p.Gln135Arg
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.499A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.414A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.473A>G
  hgvsp: ENSP00000411852.2:p.Gln158Arg
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.404A>G
  hgvsp: ENSP00000406146.1:p.Gln135Arg
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.473A>G
  hgvsp: ENSP00000348132.3:p.Gln158Arg
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.414A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.404A>G
  hgvsp: ENSP00000389340.2:p.Gln135Arg
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3130
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1445
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12268
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26487
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11882
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gln158Arg
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
reference allele: A
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

7-23768859-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23768859
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23768859
    reference: chr 7
allele count: 1
allele frequency: 8.326533331112925e-6
allele num: 120098
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.415G>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.474G>C
  hgvsp: ENSP00000348132.3:p.Gln158His
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.999G>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.405G>C
  hgvsp: ENSP00000389340.2:p.Gln135His
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.500G>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.342G>C
  hgvsp: ENSP00000414087.1:p.Gln114His
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.474G>C
  hgvsp: ENSP00000411852.2:p.Gln158His
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.405G>C
  hgvsp: ENSP00000346660.3:p.Gln135His
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.405G>C
  hgvsp: ENSP00000406146.1:p.Gln135His
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.415G>C
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3131
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11812
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1443
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26467
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12251
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gln158His
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ

7-23768877-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23768877
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23768877
    reference: chr 7
allele count: 1
allele frequency: 8.554612647139337e-6
allele num: 116896
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.483+9C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.414+9C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.424+9C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.1008+9C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.509+9C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.351+9C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.483+9C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.414+9C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.414+9C>T
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.424+9C>T
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1418
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10553
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2894
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9194
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2089
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23270
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5840
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1605
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32451
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4357
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

7-23768878-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23768878
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23768878
    reference: chr 7
allele count: 188
allele frequency: 1.610664656191635e-3
allele num: 116722
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.351+10G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.414+10G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.424+10G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.424+10G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.414+10G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.1008+10G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.509+10G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.483+10G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.483+10G>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.414+10G>A
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2162
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 5.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 4.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6228
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10310
  bin: 3.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 2867
  bin: 3.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 5.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1767
  bin: 1.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 22988
  bin: 2.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 9121
  bin: 2.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 9.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 4.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 4
population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

7-23768881-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23768881
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23768881
    reference: chr 7
allele count: 1
allele frequency: 8.646180981860312e-6
allele num: 115658
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.509+13T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.483+13T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.414+13T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.351+13T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.424+13T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.414+13T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.1008+13T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.414+13T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.424+13T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.483+13T>C
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8818
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8462
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8648
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2620
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3552
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2430
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20978
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 855
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2864
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: East Asian
population: European (Finnish)
reference allele: T
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ

7-23768884-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23768884
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23768884
    reference: chr 7
allele count: 1
allele frequency: 8.651566798747254e-6
allele num: 115586
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.424+16T>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.414+16T>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.414+16T>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.509+16T>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.414+16T>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.351+16T>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.483+16T>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.483+16T>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.424+16T>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.1008+16T>G
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3503
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8213
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8836
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20968
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2670
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1359
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2383
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8939
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

7-23768889-A-AT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23768889
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23768890
    reference: chr 7
allele count: 2
allele frequency: 1.742949768187681e-5
allele num: 114748
alternate allele: AT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.414+26dupT
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.414+26dupT
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.424+26dupT
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.351+26dupT
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.509+26dupT
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.483+26dupT
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.1008+26dupT
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.424+26dupT
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.483+26dupT
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.414+26dupT
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7165
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11120
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2959
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6591
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7730
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2301
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17564
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 942
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23055
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2932
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
reference allele: A
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

7-23768893-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23768893
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23768893
    reference: chr 7
allele count: 1
allele frequency: 8.737592618481756e-6
allele num: 114448
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.414+25T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.424+25T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.424+25T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.414+25T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.1008+25T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.414+25T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.509+25T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.483+25T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.351+25T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.483+25T>C
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2276
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11708
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3078
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7741
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16335
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7558
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6692
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4696
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9401
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: QD

7-23768896-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23768896
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23768896
    reference: chr 7
allele count: 1
allele frequency: 8.792909397861565e-6
allele num: 113728
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.424+28C>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.414+28C>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.414+28C>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.483+28C>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.351+28C>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.483+28C>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.414+28C>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.1008+28C>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.424+28C>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.509+28C>G
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7516
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14427
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6068
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3243
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12461
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2235
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9393
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5297
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 508
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: C
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum

7-23768902-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23768902
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23768902
    reference: chr 7
allele count: 4
allele frequency: 3.548930884571023e-5
allele num: 112710
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.414+34A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.483+34A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.483+34A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.414+34A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.414+34A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.424+34A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.1008+34A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.509+34A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.351+34A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.424+34A>G
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11223
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13162
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3692
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11188
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2147
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4930
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8902
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1419
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5087
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3568
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3735
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
reference allele: A
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD

7-23768907-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23768907
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23768907
    reference: chr 7
allele count: 29678
allele frequency: 2.691784425054873e-1
allele num: 110254
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.424+39A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.483+39A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.483+39A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.1008+39A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.414+39A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.509+39A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.351+39A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.414+39A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.414+39A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.424+39A>G
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9047
  bin: 2.75e1
  variant carriers: 3744
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 9.75e1
  variant carriers: 256
genotype depth: GenotypeDepth
  all individuals: 4143
  bin: 7.5e0
  variant carriers: 1142
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 52
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 5.25e1
  variant carriers: 336
genotype depth: GenotypeDepth
  all individuals: 4208
  bin: 3.25e1
  variant carriers: 2167
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 2.5e0
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 8780
  bin: 2.25e1
  variant carriers: 5620
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.25e1
  variant carriers: 111
genotype depth: GenotypeDepth
  all individuals: 13816
  bin: 1.75e1
  variant carriers: 6010
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 6.25e1
  variant carriers: 191
genotype depth: GenotypeDepth
  all individuals: 1992
  bin: 3.75e1
  variant carriers: 1197
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.75e1
  variant carriers: 162
genotype depth: GenotypeDepth
  all individuals: 13361
  bin: 1.25e1
  variant carriers: 4110
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 4.75e1
  variant carriers: 488
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 5.75e1
  variant carriers: 234
genotype depth: GenotypeDepth
  all individuals: 1240
  bin: 4.25e1
  variant carriers: 713
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 1.75e1
  variant carriers: 137
genotype quality: GenotypeQuality
  all individuals: 7642
  bin: 2.25e1
  variant carriers: 183
genotype quality: GenotypeQuality
  all individuals: 650
  bin: 7.25e1
  variant carriers: 236
genotype quality: GenotypeQuality
  all individuals: 440
  bin: 8.75e1
  variant carriers: 263
num of homozygotes: 4331
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/7-23768911-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23768911
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23768911
    reference: chr 7
allele count: 1
allele frequency: 9.340905694216111e-6
allele num: 107056
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.509+43C>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.424+43C>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.483+43C>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.414+43C>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.483+43C>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.414+43C>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.351+43C>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.414+43C>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.1008+43C>A
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.424+43C>A
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6409
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7270
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3165
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15733
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5936
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16297
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12594
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8364
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4790
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3124
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

7-23768913-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23768913
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23768913
    reference: chr 7
allele count: 1
allele frequency: 9.4400181248348e-6
allele num: 105932
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.414+45A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.351+45A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.1008+45A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.509+45A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.414+45A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.424+45A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.483+45A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.483+45A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.424+45A>G
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.414+45A>G
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2841
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15870
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15562
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6549
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5896
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8108
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11748
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1204
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3124
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

7-23768914-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23768914
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23768914
    reference: chr 7
allele count: 3
allele frequency: 2.830669358947746e-5
allele num: 105982
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.414+46T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.1008+46T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.483+46T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.414+46T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.424+46T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.509+46T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.483+46T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.424+46T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.351+46T>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.414+46T>C
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6557
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15534
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5866
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8155
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2828
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1384
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15887
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2026
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7460
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1542
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: Latino
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/7-23775115-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 23775115
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 23775115
    reference: chr 7
allele count: 1
allele frequency: 8.994099870484962e-6
allele num: 111184
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000406146
  ensembl transcript: ENST00000428484
  gene symbol: STK31
  hgvsc: ENST00000428484.1:c.415-42A>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000346660
  ensembl transcript: ENST00000354639
  gene symbol: STK31
  hgvsc: ENST00000354639.3:c.415-42A>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000405627
  gene symbol: STK31
  hgvsc: ENST00000405627.3:n.1009-42A>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000476399
  gene symbol: STK31
  hgvsc: ENST00000476399.1:n.510-42A>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000528479
  gene symbol: STK31
  hgvsc: ENST00000528479.1:n.425-42A>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000389340
  ensembl transcript: ENST00000456014
  gene symbol: STK31
  hgvsc: ENST00000456014.2:c.415-42A>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000414087
  ensembl transcript: ENST00000422637
  gene symbol: STK31
  hgvsc: ENST00000422637.1:c.352-42A>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000348132
  ensembl transcript: ENST00000355870
  gene symbol: STK31
  hgvsc: ENST00000355870.3:c.484-42A>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl protein: ENSP00000411852
  ensembl transcript: ENST00000433467
  gene symbol: STK31
  hgvsc: ENST00000433467.2:c.484-42A>C
  variant of: http://identifiers.org/hgnc/11407
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196335
  ensembl transcript: ENST00000529549
  gene symbol: STK31
  hgvsc: ENST00000529549.1:n.424+6247A>C
  variant of: http://identifiers.org/hgnc/11407
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2128
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1397
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3377
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3281
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4826
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3854
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1662
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5906
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6485
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4211
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3004
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3146
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5637
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6554
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2389
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1975
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1701
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: MQ

GenotypeQuality
all individuals: 668
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 678
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1950
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 980
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 385
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1674
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 612
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20178
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3002
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2468
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 154
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25207
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 739
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.412030499858797e-4
allele num: 7082
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8348
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52384
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13692
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5620
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9838
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 766
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.738e0

DP
type: SiteQuality
SIO_000300: 1.245495e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.486e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.76e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.227e0

QD
type: SiteQuality
SIO_000300: 1.336e1

MQRankSum
type: SiteQuality
SIO_000300: 3.38e-1

GenotypeQuality
all individuals: 2554
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3206
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1643
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 347
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 758
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 491
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12336
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29316
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7332
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 680
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.321801718133271e-4
allele num: 8614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5074
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45116
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.12e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.166e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.2e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.8e-3

FS
type: SiteQuality
SIO_000300: 6.52e0

DP
type: SiteQuality
SIO_000300: 1.012105e6

VQSLOD
type: SiteQuality
SIO_000300: -2.844e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

QD
type: SiteQuality
SIO_000300: 9.43e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1255
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4176
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29059
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 334
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 503
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1402
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1351
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1730
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4528
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 462
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2462
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 192
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8086
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5302
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 656
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.399347377513316e-5
allele num: 41678
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4832
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11930
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.1e-3

DP
type: SiteQuality
SIO_000300: 9.29579e5

ClippingRankSum
type: SiteQuality
SIO_000300: -1.33e-1

QD
type: SiteQuality
SIO_000300: 1.776e1

MQRankSum
type: SiteQuality
SIO_000300: 1.07e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.93e0

VQSLOD
type: SiteQuality
SIO_000300: -6.808e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.67e-1

GenotypeQuality
all individuals: 885
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4247
bin: 2.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2312
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 325
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23067
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2484
bin: 9.75e1
variant carriers: 26

GenotypeQuality
all individuals: 403
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4474
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4091
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 221
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 585
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 86
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 670
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 5
allele frequency: 8.286377195889957e-4
allele num: 6034
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6772
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4118
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10816
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4318
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 17
allele frequency: 4.980955171403458e-4
allele num: 34130
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.6e-1

FS
type: SiteQuality
SIO_000300: 3.518e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.48e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.813e0

QD
type: SiteQuality
SIO_000300: 1.425e1

DP
type: SiteQuality
SIO_000300: 8.46358e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.61e-1

GenotypeDepth
all individuals: 254
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12885
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4103
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4876
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 626
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4977
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 683
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3108
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1371
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variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2934
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 314
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5311
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3754
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1317
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7961
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 973
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1733
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 666
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2623
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.644087860055241e-5
allele num: 60824
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15590
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6366
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10730
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7732
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9898
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.44e0

MQRankSum
type: SiteQuality
SIO_000300: -3.1e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.915e1

DP
type: SiteQuality
SIO_000300: 1.637894e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.75e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.419e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.2e-2

GenotypeDepth
all individuals: 241
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3600
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4732
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16954
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 379
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5079
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1288
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4319
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2547
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1681
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 661
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1588
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2526
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3787
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7956
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1352
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 968
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10726
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9888
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15586
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6374
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7752
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.64354743277891e-5
allele num: 60844
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.067e0

MQRankSum
type: SiteQuality
SIO_000300: 3.75e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.42e-1

QD
type: SiteQuality
SIO_000300: 1.019e1

VQSLOD
type: SiteQuality
SIO_000300: -1.397e0

DP
type: SiteQuality
SIO_000300: 1.662596e6

MQ
type: SiteQuality
SIO_000300: 5.859e1

FS
type: SiteQuality
SIO_000300: 4.447e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.45e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

GenotypeDepth
all individuals: 1076
bin: 5.25e1
variant carriers: 5

GenotypeQuality
all individuals: 657
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2046
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21094
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1382
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1778
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 617
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4381
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4001
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 968
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4343
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1694
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4182
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1314
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2327
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8078
bin: 9.75e1
variant carriers: 173

GenotypeQuality
all individuals: 1144
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15670
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7806
num of homozygotes: 0

African
type: Population
allele count: 160
allele frequency: 1.613879362517652e-2
allele num: 9914
num of homozygotes: 1

Latino
type: Population
allele count: 11
allele frequency: 1.019651464590285e-3
allele num: 10788
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.901480247034604e-5
allele num: 61206
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.146788990825688e-3
allele num: 872
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.9e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.48e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.27e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 7.37e-1

QD
type: SiteQuality
SIO_000300: 1.548e1

MQRankSum
type: SiteQuality
SIO_000300: 1.01e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.51e-1

DP
type: SiteQuality
SIO_000300: 1.697273e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.879999999999999e-1

GenotypeDepth
all individuals: 1074
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1878
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1458
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1772
bin: 7.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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African
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European (Non-Finnish)
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East Asian
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Other
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Latino
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allele frequency: 5.502567865003668e-4
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South Asian
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ClippingRankSum
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ReadPosRankSum
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MQ
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MQRankSum
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DP
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BaseQRankSum
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FS
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QD
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InbreedingCoeff
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Finnish)
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East Asian
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European (Non-Finnish)
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African
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South Asian
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VQSLOD
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MQRankSum
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MQ
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DP
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QD
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FS
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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European (Non-Finnish)
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South Asian
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East Asian
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European (Finnish)
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QD
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MQRankSum
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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FS
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ReadPosRankSum
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DP
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 3.477857639693948e-4
allele num: 8626
num of homozygotes: 0

African
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European (Finnish)
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Latino
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European (Non-Finnish)
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South Asian
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Other
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QD
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MQ
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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FS
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VQSLOD
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Non-Finnish)
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South Asian
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European (Finnish)
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African
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Latino
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East Asian
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ClippingRankSum
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MQ
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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FS
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InbreedingCoeff
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DP
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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South Asian
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Latino
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African
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East Asian
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MQ
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ReadPosRankSum
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FS
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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QD
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MQRankSum
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InbreedingCoeff
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Finnish)
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East Asian
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African
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European (Non-Finnish)
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VQSLOD
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MQ
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InbreedingCoeff
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MQRankSum
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DP
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FS
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ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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African
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South Asian
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Latino
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European (Non-Finnish)
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allele num: 66296
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East Asian
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FS
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QD
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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MQ
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MQRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Non-Finnish)
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allele frequency: 9.054963629229422e-5
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South Asian
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Latino
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East Asian
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African
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European (Finnish)
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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VQSLOD
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FS
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BaseQRankSum
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DP
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MQ
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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European (Non-Finnish)
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East Asian
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Other
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South Asian
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Latino
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ReadPosRankSum
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QD
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DP
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FS
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MQRankSum
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele num: 11490
num of homozygotes: 0

African
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East Asian
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South Asian
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European (Non-Finnish)
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European (Finnish)
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Other
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ClippingRankSum
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DP
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FS
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MQRankSum
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VQSLOD
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QD
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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East Asian
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Latino
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African
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European (Non-Finnish)
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Other
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VQSLOD
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InbreedingCoeff
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DP
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ReadPosRankSum
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QD
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BaseQRankSum
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FS
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ClippingRankSum
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MQ
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MQRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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East Asian
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Other
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African
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European (Finnish)
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European (Non-Finnish)
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DP
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MQRankSum
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QD
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BaseQRankSum
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InbreedingCoeff
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FS
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VQSLOD
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MQ
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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European (Finnish)
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East Asian
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European (Non-Finnish)
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Latino
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DP
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FS
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ReadPosRankSum
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QD
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VQSLOD
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MQRankSum
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MQ
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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variant carriers: 15

GenotypeQuality
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bin: 6.25e1
variant carriers: 3

GenotypeQuality
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bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 881
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 930
bin: 1.25e1
variant carriers: 14

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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bin: 2.5e0
variant carriers: 30

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 3.75e1
variant carriers: 18

GenotypeQuality
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bin: 2.75e1
variant carriers: 28

GenotypeQuality
all individuals: 5265
bin: 2.25e1
variant carriers: 29

GenotypeQuality
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bin: 5.25e1
variant carriers: 8

GenotypeQuality
all individuals: 7024
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 579
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variant carriers: 1

GenotypeQuality
all individuals: 1298
bin: 4.75e1
variant carriers: 5

GenotypeQuality
all individuals: 851
bin: 1.75e1
variant carriers: 31

GenotypeQuality
all individuals: 1376
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1163
bin: 5.75e1
variant carriers: 4

African
type: Population
allele count: 3
allele frequency: 3.15059861373661e-4
allele num: 9522
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 6.499837504062399e-4
allele num: 6154
num of homozygotes: 0

Latino
type: Population
allele count: 14
allele frequency: 1.3801261829653e-3
allele num: 10144
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 80
allele frequency: 1.355059453233511e-3
allele num: 59038
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.196172248803828e-3
allele num: 836
num of homozygotes: 0

East Asian
type: Population
allele count: 9
allele frequency: 1.184834123222749e-3
allele num: 7596
num of homozygotes: 0

South Asian
type: Population
allele count: 18
allele frequency: 1.217697199296442e-3
allele num: 14782
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -5.92e-1

MQ
type: SiteQuality
SIO_000300: 5.997e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.8e-2

FS
type: SiteQuality
SIO_000300: 4.092e0

DP
type: SiteQuality
SIO_000300: 1.959419e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.23e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.37e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.133e-1

GenotypeDepth
all individuals: 1498
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5265
bin: 2.25e1
variant carriers: 29

GenotypeQuality
all individuals: 1298
bin: 4.75e1
variant carriers: 13

GenotypeQuality
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bin: 4.25e1
variant carriers: 16

GenotypeQuality
all individuals: 1783
bin: 3.75e1
variant carriers: 15

GenotypeQuality
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variant carriers: 7

GenotypeQuality
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bin: 2.75e1
variant carriers: 26

GenotypeQuality
all individuals: 929
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 42

GenotypeQuality
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bin: 1.75e1
variant carriers: 36

GenotypeQuality
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bin: 5.25e1
variant carriers: 9

GenotypeQuality
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bin: 7.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 7

GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 579
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variant carriers: 1

GenotypeQuality
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bin: 3.25e1
variant carriers: 37

GenotypeQuality
all individuals: 1116
bin: 7.25e1
variant carriers: 3

GenotypeQuality
all individuals: 22945
bin: 6.25e1
variant carriers: 8

Other
type: Population
allele count: 2
allele frequency: 2.392344497607655e-3
allele num: 836
num of homozygotes: 0

African
type: Population
allele count: 18
allele frequency: 1.890359168241966e-3
allele num: 9522
num of homozygotes: 0

South Asian
type: Population
allele count: 17
allele frequency: 1.150047354891084e-3
allele num: 14782
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.874878128046799e-4
allele num: 6154
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 7.898894154818325e-4
allele num: 7596
num of homozygotes: 0

Latino
type: Population
allele count: 19
allele frequency: 1.873028391167192e-3
allele num: 10144
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 114
allele frequency: 1.930959720857753e-3
allele num: 59038
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.8e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.92e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.2e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -9.8e-2

FS
type: SiteQuality
SIO_000300: 4.092e0

VQSLOD
type: SiteQuality
SIO_000300: -5.133e-1

DP
type: SiteQuality
SIO_000300: 1.959419e6

MQ
type: SiteQuality
SIO_000300: 5.997e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.23e-2

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10144
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9522
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.997e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.2e-2

DP
type: SiteQuality
SIO_000300: 1.959419e6

FS
type: SiteQuality
SIO_000300: 4.092e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.23e-2

VQSLOD
type: SiteQuality
SIO_000300: -5.133e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.92e-1

QD
type: SiteQuality
SIO_000300: 3.8e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.37e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.8e-2

GenotypeDepth
all individuals: 237
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variant carriers: 0

GenotypeQuality
all individuals: 814
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variant carriers: 0

GenotypeQuality
all individuals: 1694
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variant carriers: 0

GenotypeQuality
all individuals: 931
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GenotypeQuality
all individuals: 3498
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variant carriers: 0

GenotypeQuality
all individuals: 1069
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GenotypeQuality
all individuals: 6939
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variant carriers: 2

GenotypeQuality
all individuals: 873
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GenotypeQuality
all individuals: 1182
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 592
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GenotypeQuality
all individuals: 23566
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6186
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10220
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58752
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.352813852813853e-4
allele num: 14784
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.64e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.889e-1

FS
type: SiteQuality
SIO_000300: 3.03e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.82e-1

QD
type: SiteQuality
SIO_000300: 1.497e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.92e-1

DP
type: SiteQuality
SIO_000300: 1.924891e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.77e0

MQ
type: SiteQuality
SIO_000300: 5.847e1

GenotypeDepth
all individuals: 245
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6953
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 889
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variant carriers: 0

GenotypeQuality
all individuals: 2550
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variant carriers: 0

GenotypeQuality
all individuals: 300
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variant carriers: 0

GenotypeQuality
all individuals: 123
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GenotypeQuality
all individuals: 1591
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variant carriers: 0

GenotypeQuality
all individuals: 2750
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variant carriers: 0

GenotypeQuality
all individuals: 394
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GenotypeQuality
all individuals: 455
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GenotypeQuality
all individuals: 3909
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GenotypeQuality
all individuals: 1310
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variant carriers: 0

GenotypeQuality
all individuals: 153
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variant carriers: 0

GenotypeQuality
all individuals: 148
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GenotypeQuality
all individuals: 720
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GenotypeQuality
all individuals: 24217
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GenotypeQuality
all individuals: 7331
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 627
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GenotypeQuality
all individuals: 4131
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variant carriers: 0

GenotypeQuality
all individuals: 939
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variant carriers: 0

GenotypeQuality
all individuals: 1204
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16018
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6466
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.57114127702363e-5
allele num: 63648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11208
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10102
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8328
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.599e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.156e0

DP
type: SiteQuality
SIO_000300: 1.731224e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.215e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.3e0

FS
type: SiteQuality
SIO_000300: 4.895e0

VQSLOD
type: SiteQuality
SIO_000300: -7.403e-1

MQ
type: SiteQuality
SIO_000300: 5.92e1

MQRankSum
type: SiteQuality
SIO_000300: 6.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

GenotypeDepth
all individuals: 657
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 124
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5992
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1519
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2798
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variant carriers: 1

GenotypeQuality
all individuals: 586
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variant carriers: 0

GenotypeQuality
all individuals: 3346
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variant carriers: 1

GenotypeQuality
all individuals: 932
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variant carriers: 0

GenotypeQuality
all individuals: 529
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variant carriers: 0

GenotypeQuality
all individuals: 3095
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variant carriers: 0

GenotypeQuality
all individuals: 880
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6135
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variant carriers: 0

GenotypeQuality
all individuals: 1187
bin: 8.25e1
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GenotypeQuality
all individuals: 974
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GenotypeQuality
all individuals: 2178
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GenotypeQuality
all individuals: 4496
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GenotypeQuality
all individuals: 10286
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GenotypeQuality
all individuals: 6466
bin: 2.25e1
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GenotypeQuality
all individuals: 7360
bin: 9.75e1
variant carriers: 64

GenotypeQuality
all individuals: 1182
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GenotypeQuality
all individuals: 622
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

Latino
type: Population
allele count: 7
allele frequency: 6.341728574017033e-4
allele num: 11038
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8086
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.330716637123322e-5
allele num: 15796
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6410
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.613059328322096e-4
allele num: 61994
num of homozygotes: 0

African
type: Population
allele count: 49
allele frequency: 4.929577464788733e-3
allele num: 9940
num of homozygotes: 1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.31e-1

QD
type: SiteQuality
SIO_000300: 1.59e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

DP
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SIO_000300: 1.624355e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.01e0

MQRankSum
type: SiteQuality
SIO_000300: -1.97e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.83e0

GenotypeDepth
all individuals: 412
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1516
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6027
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GenotypeQuality
all individuals: 1990
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GenotypeQuality
all individuals: 11156
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GenotypeQuality
all individuals: 932
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GenotypeQuality
all individuals: 736
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GenotypeQuality
all individuals: 501
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GenotypeQuality
all individuals: 6652
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GenotypeQuality
all individuals: 2801
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GenotypeQuality
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GenotypeQuality
all individuals: 7327
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variant carriers: 20

GenotypeQuality
all individuals: 563
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GenotypeQuality
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GenotypeQuality
all individuals: 3358
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GenotypeQuality
all individuals: 337
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GenotypeQuality
all individuals: 1184
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GenotypeQuality
all individuals: 1185
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GenotypeQuality
all individuals: 623
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GenotypeQuality
all individuals: 6136
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GenotypeQuality
all individuals: 4494
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variant carriers: 0

South Asian
type: Population
allele count: 20
allele frequency: 1.258811681772407e-3
allele num: 15888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6414
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8086
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9932
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62152
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.012256669069935e-5
allele num: 11096
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.23e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.85e-1

FS
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QD
type: SiteQuality
SIO_000300: 1.508e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.85e0

MQ
type: SiteQuality
SIO_000300: 5.964e1

MQRankSum
type: SiteQuality
SIO_000300: 4.19e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.18e-1

DP
type: SiteQuality
SIO_000300: 1.62239e6

GenotypeDepth
all individuals: 1002
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variant carriers: 0

GenotypeQuality
all individuals: 3356
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5131
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GenotypeQuality
all individuals: 3232
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GenotypeQuality
all individuals: 1184
bin: 8.25e1
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GenotypeQuality
all individuals: 810
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GenotypeQuality
all individuals: 622
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15822
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.812907904278463e-4
allele num: 11032
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8042
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9878
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61712
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.558e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.77e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.184e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.37e-1

QD
type: SiteQuality
SIO_000300: 1.036e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.89e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.616884e6

GenotypeQuality
all individuals: 1018
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2109
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1614
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 760
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 724
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 480
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2503
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 851
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33559
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 561
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 530
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8015
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 759
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 316
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4475
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 278
bin: 7.5e0
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12734
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9996
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.531299767242435e-5
allele num: 65304
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -6.04e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.12e-1

QD
type: SiteQuality
SIO_000300: 9.77e0

MQRankSum
type: SiteQuality
SIO_000300: -8.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.894e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.3e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.759508e6

GenotypeQuality
all individuals: 253
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 683
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 540
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1004
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 840
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2435
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1428
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2065
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 765
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34740
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 303
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8043
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4475
bin: 9.75e1
variant carriers: 23

African
type: Population
allele count: 22
allele frequency: 2.19692430597164e-3
allele num: 10014
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65330
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.811279487580065e-5
allele num: 12802
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

DP
type: SiteQuality
SIO_000300: 1.763333e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.97e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.522e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.12e-1

GenotypeQuality
all individuals: 745
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1425
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 569
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35400
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2429
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8047
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variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 536
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2274
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 942
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 839
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4448
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2081
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12956
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65410
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.158480074142725e-4
allele num: 8632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10040
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -5.724e-1

QD
type: SiteQuality
SIO_000300: 1.184e1

MQ
type: SiteQuality
SIO_000300: 5.965e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.23e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.9e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.9e-3

DP
type: SiteQuality
SIO_000300: 1.7688e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.706e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.3e-1

GenotypeQuality
all individuals: 50
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1422
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36224
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 534
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 410
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2246
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8075
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2088
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 834
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 760
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2425
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13270
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.900990099009902e-5
allele num: 10100
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.068343457159427e-4
allele num: 65522
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.366e0

MQ
type: SiteQuality
SIO_000300: 5.976e1

DP
type: SiteQuality
SIO_000300: 1.779462e6

QD
type: SiteQuality
SIO_000300: 1.278e1

MQRankSum
type: SiteQuality
SIO_000300: 3.04e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -6.45e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.343e0

VQSLOD
type: SiteQuality
SIO_000300: 4.03e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.7e-1

GenotypeQuality
all individuals: 835
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 535
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
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variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 706
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variant carriers: 0

GenotypeQuality
all individuals: 2427
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variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 36462
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variant carriers: 0

GenotypeQuality
all individuals: 1422
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variant carriers: 0

GenotypeQuality
all individuals: 38
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GenotypeQuality
all individuals: 370
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variant carriers: 0

GenotypeQuality
all individuals: 2198
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variant carriers: 0

GenotypeQuality
all individuals: 99
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variant carriers: 0

GenotypeQuality
all individuals: 54
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variant carriers: 0

GenotypeQuality
all individuals: 4444
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8090
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2094
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13422
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10128
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.524994662518681e-5
allele num: 65574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.449e0

QD
type: SiteQuality
SIO_000300: 1.374e1

DP
type: SiteQuality
SIO_000300: 1.781817e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.53e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.39e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 8.77e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.8e-1

GenotypeQuality
all individuals: 95
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 580
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variant carriers: 0

GenotypeQuality
all individuals: 836
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2164
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variant carriers: 0

GenotypeQuality
all individuals: 43
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variant carriers: 0

GenotypeQuality
all individuals: 660
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variant carriers: 0

GenotypeQuality
all individuals: 1420
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variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 92
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variant carriers: 0

GenotypeQuality
all individuals: 69
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8103
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 533
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2091
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36582
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2433
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10136
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.473026163463765e-4
allele num: 8638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65616
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.27e-1

FS
type: SiteQuality
SIO_000300: 3.248e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.75e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

MQ
type: SiteQuality
SIO_000300: 5.934e1

QD
type: SiteQuality
SIO_000300: 1.025e1

VQSLOD
type: SiteQuality
SIO_000300: 6.870000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.783637e6

GenotypeDepth
all individuals: 323
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 496
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 536
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 987
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variant carriers: 0

GenotypeQuality
all individuals: 1423
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variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38944
bin: 6.25e1
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GenotypeQuality
all individuals: 835
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8255
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4441
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2123
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2438
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10292
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.668515950069348e-5
allele num: 11536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66236
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15280
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 1.839e0

VQSLOD
type: SiteQuality
SIO_000300: 7.84e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.04e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.434e0

QD
type: SiteQuality
SIO_000300: 1.215e1

DP
type: SiteQuality
SIO_000300: 1.816263e6

MQ
type: SiteQuality
SIO_000300: 5.929e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.51e0

GenotypeQuality
all individuals: 74
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2123
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4441
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1424
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 419
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8330
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 534
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504347564461293e-5
allele num: 66474
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16046
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.100000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.857e1

QD
type: SiteQuality
SIO_000300: 1.047e1

DP
type: SiteQuality
SIO_000300: 1.829996e6

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: 1.15e0

VQSLOD
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SIO_000300: -1.775e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.15e0

MQRankSum
type: SiteQuality
SIO_000300: -6.900000000000001e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

GenotypeQuality
all individuals: 1425
bin: 8.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16102
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.503804625703029e-5
allele num: 66498
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.463e-1

DP
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FS
type: SiteQuality
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ClippingRankSum
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SIO_000300: -7.99e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

MQRankSum
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QD
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BaseQRankSum
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SIO_000300: -3.851e0

InbreedingCoeff
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SIO_000300: 1.9e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66616
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

VQSLOD
type: SiteQuality
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ClippingRankSum
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MQRankSum
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MQ
type: SiteQuality
SIO_000300: 5.865e1

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.374e0

ReadPosRankSum
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SIO_000300: 1.93e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

DP
type: SiteQuality
SIO_000300: 1.837704e6

BaseQRankSum
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SIO_000300: 3.45e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500555205426008e-5
allele num: 66642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

FS
type: SiteQuality
SIO_000300: 6.3e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.5e-1

QD
type: SiteQuality
SIO_000300: 1.274e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.05e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.94e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

VQSLOD
type: SiteQuality
SIO_000300: -6.3e-3

DP
type: SiteQuality
SIO_000300: 1.838095e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 40

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 39
allele frequency: 4.506586549572452e-3
allele num: 8654
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.06060606060606e-5
allele num: 16500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66652
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.839913e6

MQ
type: SiteQuality
SIO_000300: 5.967e1

InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
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SIO_000300: -2.32e-1

BaseQRankSum
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QD
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SIO_000300: 1.222e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.500330072615976e-5
allele num: 66652
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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InbreedingCoeff
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MQ
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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FS
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MQRankSum
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QD
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
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num of homozygotes: 0

South Asian
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allele frequency: 6.059871530723549e-5
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BaseQRankSum
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VQSLOD
type: SiteQuality
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ClippingRankSum
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MQ
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ReadPosRankSum
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FS
type: SiteQuality
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InbreedingCoeff
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MQRankSum
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QD
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
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allele frequency: 6.058403004967891e-5
allele num: 16506
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.500060002400096e-5
allele num: 66664
num of homozygotes: 0

African
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FS
type: SiteQuality
SIO_000300: 3.599e0

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQRankSum
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DP
type: SiteQuality
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VQSLOD
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
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QD
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SIO_000300: 1.21e1

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1419
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 528
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2114
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40281
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4406
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2438
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.467406380027739e-4
allele num: 11536
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66648
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.95e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.41e-1

MQ
type: SiteQuality
SIO_000300: 5.924e1

FS
type: SiteQuality
SIO_000300: 1.217e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

DP
type: SiteQuality
SIO_000300: 1.837106e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.749e0

MQRankSum
type: SiteQuality
SIO_000300: -1.11e-1

QD
type: SiteQuality
SIO_000300: 1.114e1

GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2109
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8363
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156604210039325e-4
allele num: 8646
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66642
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.799999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

QD
type: SiteQuality
SIO_000300: 1.362e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.61e-1

DP
type: SiteQuality
SIO_000300: 1.836276e6

MQ
type: SiteQuality
SIO_000300: 5.95e1

FS
type: SiteQuality
SIO_000300: 2.553e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.35e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.15e0

GenotypeQuality
all individuals: 170
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2108
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 523
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variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8356
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.501935832407936e-5
allele num: 66638
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.946e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

FS
type: SiteQuality
SIO_000300: 1.238e0

MQRankSum
type: SiteQuality
SIO_000300: -1.35e-1

DP
type: SiteQuality
SIO_000300: 1.83595e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.56e0

QD
type: SiteQuality
SIO_000300: 1.584e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.135e0

VQSLOD
type: SiteQuality
SIO_000300: 6.09e-1

GenotypeQuality
all individuals: 829
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2412
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variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2104
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variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1403
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.66183574879227e-5
allele num: 10350
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.21e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.833e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

DP
type: SiteQuality
SIO_000300: 1.833922e6

MQ
type: SiteQuality
SIO_000300: 5.935e1

VQSLOD
type: SiteQuality
SIO_000300: 3.64e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.196e0

QD
type: SiteQuality
SIO_000300: 1.116e1

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 293
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1401
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4396
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 21
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 519
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variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 2411
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2100
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40186
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 830
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8326
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502358703163967e-5
allele num: 66562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.011e0

DP
type: SiteQuality
SIO_000300: 1.83334e6

MQRankSum
type: SiteQuality
SIO_000300: 2.2e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.5e-2

FS
type: SiteQuality
SIO_000300: 4.41e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.57e-1

QD
type: SiteQuality
SIO_000300: 7.91e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.7e-2

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2098
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variant carriers: 0

GenotypeQuality
all individuals: 1401
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4395
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 829
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 519
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.03e0

FS
type: SiteQuality
SIO_000300: 2.7e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.71e-1

QD
type: SiteQuality
SIO_000300: 1.073e1

DP
type: SiteQuality
SIO_000300: 1.833263e6

MQRankSum
type: SiteQuality
SIO_000300: 5.36e-1

MQ
type: SiteQuality
SIO_000300: 5.964e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

VQSLOD
type: SiteQuality
SIO_000300: 9.53e-1

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 515
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variant carriers: 0

GenotypeQuality
all individuals: 57
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GenotypeQuality
all individuals: 507
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
all individuals: 39
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8276
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1385
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504438092372499e-5
allele num: 66470
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10338
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.04e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 9.46e-1

DP
type: SiteQuality
SIO_000300: 1.829466e6

VQSLOD
type: SiteQuality
SIO_000300: -4.06e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

FS
type: SiteQuality
SIO_000300: 1.882e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.19e0

QD
type: SiteQuality
SIO_000300: 1.313e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.14e0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2375
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16358
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505661286437003e-5
allele num: 66416
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 9.15e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.1e-1

MQ
type: SiteQuality
SIO_000300: 5.905e1

VQSLOD
type: SiteQuality
SIO_000300: -7.893e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.84e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.15e-1

DP
type: SiteQuality
SIO_000300: 1.827158e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.129e0

GenotypeQuality
all individuals: 102
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4386
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 39685
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2366
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
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GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 793
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 513
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8222
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 823
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2049
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1369
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507068149621726e-5
allele num: 66354
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10310
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16288
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.87e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.76e-1

DP
type: SiteQuality
SIO_000300: 1.824009e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 4.419e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.87e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.389999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.364e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.021e0

GenotypeQuality
all individuals: 2321
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4379
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 40
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 5.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 31
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8116
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 509
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 819
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10272
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511121856866538e-5
allele num: 66176
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16156
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.72e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.69e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -7.3e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.61e-1

DP
type: SiteQuality
SIO_000300: 1.815227e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.12e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.3e-1

QD
type: SiteQuality
SIO_000300: 1.224e1

GenotypeQuality
all individuals: 1327
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2309
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 208
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variant carriers: 0

GenotypeQuality
all individuals: 819
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2006
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1344
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10266
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11470
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511898642315019e-5
allele num: 66142
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16138
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.909e0

DP
type: SiteQuality
SIO_000300: 1.813697e6

VQSLOD
type: SiteQuality
SIO_000300: -8.502999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.94e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.03e-1

QD
type: SiteQuality
SIO_000300: 1.496e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 5.94e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.08e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 763
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 254
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5574
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2149
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variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 494
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variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1272
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variant carriers: 0

GenotypeQuality
all individuals: 288
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variant carriers: 0

GenotypeQuality
all individuals: 1294
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6957
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variant carriers: 0

GenotypeQuality
all individuals: 1616
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1793
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 801
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.511264487563485e-5
allele num: 15358
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11272
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8444
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.832e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.43e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.18e0

FS
type: SiteQuality
SIO_000300: 9.286e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.35e0

QD
type: SiteQuality
SIO_000300: 1.086e1

MQRankSum
type: SiteQuality
SIO_000300: -9.77e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.613e0

DP
type: SiteQuality
SIO_000300: 1.698403e6

GenotypeQuality
all individuals: 1252
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 110
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32103
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1769
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1382
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6895
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variant carriers: 1

GenotypeQuality
all individuals: 5857
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 255
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GenotypeQuality
all individuals: 827
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variant carriers: 0

GenotypeQuality
all individuals: 4445
bin: 9.75e1
variant carriers: 177

GenotypeQuality
all individuals: 239
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 184
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variant carriers: 1

GenotypeQuality
all individuals: 2119
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GenotypeQuality
all individuals: 792
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1738
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 485
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 166
allele frequency: 1.679142221323083e-2
allele num: 9886
num of homozygotes: 4

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

Latino
type: Population
allele count: 16
allele frequency: 1.423234299946629e-3
allele num: 11242
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.133786848072562e-3
allele num: 882
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.764216280008696e-5
allele num: 64398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8432
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15338
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.27e-1

FS
type: SiteQuality
SIO_000300: 8.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.892e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.63e-1

QD
type: SiteQuality
SIO_000300: 1.33e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.21e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.27e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.11e-2

DP
type: SiteQuality
SIO_000300: 1.688461e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 5381
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 86
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variant carriers: 0

GenotypeQuality
all individuals: 1021
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7644
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variant carriers: 0

GenotypeQuality
all individuals: 404
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GenotypeQuality
all individuals: 27895
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variant carriers: 0

GenotypeQuality
all individuals: 4288
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variant carriers: 1

GenotypeQuality
all individuals: 481
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GenotypeQuality
all individuals: 1871
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GenotypeQuality
all individuals: 2071
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GenotypeQuality
all individuals: 97
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1440
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variant carriers: 0

GenotypeQuality
all individuals: 791
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.566416040100251e-5
allele num: 63840
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11146
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15156
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9766
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8350
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.606238e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.49e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.43e0

FS
type: SiteQuality
SIO_000300: 3.074e0

QD
type: SiteQuality
SIO_000300: 1.235e1

VQSLOD
type: SiteQuality
SIO_000300: 9.63e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

MQ
type: SiteQuality
SIO_000300: 5.945e1

GenotypeQuality
all individuals: 1422
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2076
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1852
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GenotypeQuality
all individuals: 1190
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GenotypeQuality
all individuals: 1644
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GenotypeQuality
all individuals: 5321
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GenotypeQuality
all individuals: 372
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GenotypeQuality
all individuals: 65
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GenotypeQuality
all individuals: 4288
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GenotypeQuality
all individuals: 81
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GenotypeQuality
all individuals: 29047
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GenotypeQuality
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GenotypeQuality
all individuals: 481
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GenotypeQuality
all individuals: 507
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variant carriers: 0

GenotypeQuality
all individuals: 788
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variant carriers: 0

GenotypeQuality
all individuals: 7720
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11144
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6524
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15146
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9758
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.567594682718836e-5
allele num: 63792
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8348
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

FS
type: SiteQuality
SIO_000300: 2.319e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.69e-1

DP
type: SiteQuality
SIO_000300: 1.602124e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.24e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.64e0

MQRankSum
type: SiteQuality
SIO_000300: -1.45e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.45e-1

QD
type: SiteQuality
SIO_000300: 1.282e1

GenotypeQuality
all individuals: 778
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 909
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 601
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.5e0
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GenotypeQuality
all individuals: 1174
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 783
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2841
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 330
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variant carriers: 0

GenotypeQuality
all individuals: 481
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variant carriers: 0

GenotypeQuality
all individuals: 4287
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variant carriers: 1

GenotypeQuality
all individuals: 1382
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4816
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1803
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9025
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4219
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11066
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.578133383833602e-5
allele num: 63366
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.687174000267486e-5
allele num: 14954
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9696
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8288
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.17e0

FS
type: SiteQuality
SIO_000300: 2.601e0

VQSLOD
type: SiteQuality
SIO_000300: 2.28e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -2.62e-1

DP
type: SiteQuality
SIO_000300: 1.529232e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -4.9e-2

GenotypeQuality
all individuals: 164
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3363
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1351
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.5e0
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3049
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1108
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 479
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 781
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9680
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11050
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.207437816952427e-4
allele num: 8282
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63190
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6508
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14876
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.23e0

VQSLOD
type: SiteQuality
SIO_000300: 1.4e-1

FS
type: SiteQuality
SIO_000300: 5.949e0

MQRankSum
type: SiteQuality
SIO_000300: -9.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.59e-1

DP
type: SiteQuality
SIO_000300: 1.503861e6

QD
type: SiteQuality
SIO_000300: 1.537e1

GenotypeQuality
all individuals: 1517
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4285
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 475
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variant carriers: 0

GenotypeQuality
all individuals: 1714
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8234
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10996
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.590684948939013e-5
allele num: 62866
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6496
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.468444e6

VQSLOD
type: SiteQuality
SIO_000300: 2.72e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.16e-1

QD
type: SiteQuality
SIO_000300: 8.609999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.17e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.252e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.39e-1

GenotypeQuality
all individuals: 775
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9954
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6301
bin: 3.25e1
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GenotypeQuality
all individuals: 4282
bin: 9.75e1
variant carriers: 4

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2082
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 2.5e0
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1140
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1638
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14235
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 686
bin: 7.5e0
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62302
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6488
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14442
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.912797838368951e-4
allele num: 8142
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10938
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9548
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.413126e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.82e0

FS
type: SiteQuality
SIO_000300: 1.575e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.16e0

MQRankSum
type: SiteQuality
SIO_000300: 4.1e-2

QD
type: SiteQuality
SIO_000300: 1.154e1

GenotypeQuality
all individuals: 4490
bin: 3.25e1
variant carriers: 250

GenotypeQuality
all individuals: 7805
bin: 6.25e1
variant carriers: 444

GenotypeQuality
all individuals: 1322
bin: 4.75e1
variant carriers: 448

GenotypeQuality
all individuals: 985
bin: 7.75e1
variant carriers: 438

GenotypeQuality
all individuals: 612
bin: 2.5e0
variant carriers: 30

GenotypeQuality
all individuals: 3391
bin: 3.75e1
variant carriers: 346

GenotypeQuality
all individuals: 2694
bin: 2.75e1
variant carriers: 135

GenotypeQuality
all individuals: 847
bin: 7.5e0
variant carriers: 60

GenotypeQuality
all individuals: 1658
bin: 6.75e1
variant carriers: 405

GenotypeQuality
all individuals: 1264
bin: 4.25e1
variant carriers: 284

GenotypeQuality
all individuals: 737
bin: 5.25e1
variant carriers: 484

GenotypeQuality
all individuals: 774
bin: 8.25e1
variant carriers: 412

GenotypeQuality
all individuals: 602
bin: 9.25e1
variant carriers: 325

GenotypeQuality
all individuals: 465
bin: 1.25e1
variant carriers: 73

GenotypeQuality
all individuals: 23285
bin: 9.75e1
variant carriers: 21485

GenotypeQuality
all individuals: 467
bin: 5.75e1
variant carriers: 268

African
type: Population
allele count: 520
allele frequency: 5.515485787017395e-2
allele num: 9428
num of homozygotes: 8

Latino
type: Population
allele count: 1441
allele frequency: 1.339966524084062e-1
allele num: 10754
num of homozygotes: 108

European (Finnish)
type: Population
allele count: 2018
allele frequency: 3.159048215403882e-1
allele num: 6388
num of homozygotes: 309

South Asian
type: Population
allele count: 4974
allele frequency: 3.519173623885666e-1
allele num: 14134
num of homozygotes: 851

Other
type: Population
allele count: 250
allele frequency: 2.962085308056872e-1
allele num: 844
num of homozygotes: 34

European (Non-Finnish)
type: Population
allele count: 17213
allele frequency: 2.83313582197643e-1
allele num: 60756
num of homozygotes: 2354

East Asian
type: Population
allele count: 3262
allele frequency: 4.10314465408805e-1
allele num: 7950
num of homozygotes: 667

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.41e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.363697e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.28e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.0e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.69e-2

QD
type: SiteQuality
SIO_000300: 2.03e1

VQSLOD
type: SiteQuality
SIO_000300: 4.76e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.66e0

GenotypeQuality
all individuals: 1447
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2241
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9811
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 987
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 678
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 490
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variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2703
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 281
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variant carriers: 0

GenotypeQuality
all individuals: 696
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variant carriers: 0

GenotypeQuality
all individuals: 695
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variant carriers: 0

GenotypeQuality
all individuals: 986
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variant carriers: 0

GenotypeQuality
all individuals: 1081
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variant carriers: 0

GenotypeQuality
all individuals: 2459
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variant carriers: 0

GenotypeQuality
all individuals: 6747
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59114
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.069747539580659e-4
allele num: 9348
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13050
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7748
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6380
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.17e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.56e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.1e-3

DP
type: SiteQuality
SIO_000300: 1.220933e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.8e-1

FS
type: SiteQuality
SIO_000300: 4.329e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.52e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.3e-1

QD
type: SiteQuality
SIO_000300: 9.119999999999999e0

GenotypeQuality
all individuals: 436
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1225
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7214
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1683
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 677
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
all individuals: 2868
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variant carriers: 0

GenotypeQuality
all individuals: 1532
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variant carriers: 0

GenotypeQuality
all individuals: 122
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GenotypeQuality
all individuals: 980
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variant carriers: 0

GenotypeQuality
all individuals: 3723
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 488
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GenotypeQuality
all individuals: 2037
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.509319132750095e-5
allele num: 10516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6384
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12914
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9290
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58350
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7674
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.381e0

VQSLOD
type: SiteQuality
SIO_000300: -1.846e0

DP
type: SiteQuality
SIO_000300: 1.205558e6

MQRankSum
type: SiteQuality
SIO_000300: -8.169999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.93e0

MQ
type: SiteQuality
SIO_000300: 5.707e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e0

QD
type: SiteQuality
SIO_000300: 8.35e0

GenotypeQuality
all individuals: 1592
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1213
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 976
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 11831
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4831
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7215
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3719
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1198
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 676
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 678
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2866
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3126
bin: 9.75e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58390
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9292
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.321622039931899e-4
allele num: 12922
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6392
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7680
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10500
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.205115e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.45e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.46e-1

FS
type: SiteQuality
SIO_000300: 2.827e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.04e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.95e-1

QD
type: SiteQuality
SIO_000300: 1.456e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.48e0

GenotypeQuality
all individuals: 40435
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3771
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1344
bin: 8.75e1
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GenotypeQuality
all individuals: 633
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variant carriers: 0

GenotypeQuality
all individuals: 451
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 663
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1252
bin: 7.5e0
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GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2234
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1661
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1006
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9840
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64212
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 810
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.176470588235294e-4
allele num: 8500
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9778
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.54e-1

FS
type: SiteQuality
SIO_000300: 1.77e0

MQ
type: SiteQuality
SIO_000300: 6.0e1