5-139284026-TGCCGCGCTGCGCCCCC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139284026
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139284010
    reference: chr 5
allele count: 1
allele frequency: 1.192349883149711e-5
allele num: 83868
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8031
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17025
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2719
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3481
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9742
  bin: 7.5e0
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genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14072
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1789
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3799
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2022
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2691
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11062
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6491
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2816
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: TGCCGCGCTGCGCCCCC
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD

5-139284029-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139284029
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139284029
    reference: chr 5
allele count: 2
allele frequency: 2.430488041998833e-5
allele num: 82288
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.701-16933G>C
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.701-16933G>C
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.701-16933G>C
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.701-16933G>C
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.701-16933G>C
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.701-16933G>C
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.701-16933G>C
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.701-16933G>C
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10102
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3600
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13905
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16738
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2465
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8298
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2827
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
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genotype quality: GenotypeQuality
  all individuals: 6513
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genotype quality: GenotypeQuality
  all individuals: 1841
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genotype quality: GenotypeQuality
  all individuals: 4117
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genotype quality: GenotypeQuality
  all individuals: 311
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3155
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1179
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: DP

http://identifiers.org/exac.variant/5-139284031-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139284031
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139284031
    reference: chr 5
allele count: 1
allele frequency: 1.231557427522845e-5
allele num: 81198
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.701-16935G>T
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.701-16935G>T
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.701-16935G>T
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.701-16935G>T
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.701-16935G>T
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.701-16935G>T
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.701-16935G>T
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.701-16935G>T
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16692
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13830
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3627
  bin: 2.5e0
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 8342
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 8.75e1
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genotype quality: GenotypeQuality
  all individuals: 9782
  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 142
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5053
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum

5-139284031-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139284031
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139284031
    reference: chr 5
allele count: 1
allele frequency: 1.231557427522845e-5
allele num: 81198
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.701-16935G>A
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.701-16935G>A
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.701-16935G>A
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.701-16935G>A
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.701-16935G>A
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.701-16935G>A
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.701-16935G>A
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.701-16935G>A
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13830
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3627
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16692
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10244
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8342
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1919
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3744
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3561
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3915
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2365
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7808
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 961
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 902
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP

5-139421913-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139421913
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139421913
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 4750
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.700+42C>T
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.700+42C>T
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.700+42C>T
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.700+42C>T
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.700+42C>T
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.700+42C>T
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.700+42C>T
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.700+42C>T
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39163
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14248
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1563
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5474
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 660
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30174
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6179
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 512
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 727
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/5-139421915-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139421915
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139421915
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 5216
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.700+40G>T
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.700+40G>T
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.700+40G>T
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.700+40G>T
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.700+40G>T
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.700+40G>T
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.700+40G>T
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.700+40G>T
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38581
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15115
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31042
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3221
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 808
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 690
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3667
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

5-139421918-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139421918
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139421917
    reference: chr 5
allele count: 1
allele frequency: 1.904036557501904e-4
allele num: 5252
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.700+36delG
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.700+36delG
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.700+36delG
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.700+36delG
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.700+36delG
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.700+36delG
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.700+36delG
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.700+36delG
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16607
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37332
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1659
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 788
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 649
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 803
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: TC
site quality: FS
site quality: DP
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/5-139421923-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139421923
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139421923
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 6348
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.700+32G>T
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.700+32G>T
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.700+32G>T
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.700+32G>T
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.700+32G>T
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.700+32G>T
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.700+32G>T
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.700+32G>T
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: intron
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 19154
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35260
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1625
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4314
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14871
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 905
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30551
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

5-139421923-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139421923
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139421923
    reference: chr 5
allele count: 1
allele frequency: 1.575299306868305e-4
allele num: 6348
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.700+32G>C
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.700+32G>C
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.700+32G>C
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.700+32G>C
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.700+32G>C
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.700+32G>C
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.700+32G>C
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.700+32G>C
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19154
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35260
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1625
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4314
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ

5-139421924-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139421924
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139421923
    reference: chr 5
allele count: 4
allele frequency: 6.207324643078833e-4
allele num: 6444
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.700+30delA
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.700+30delA
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.700+30delA
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.700+30delA
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.700+30delA
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.700+30delA
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.700+30delA
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.700+30delA
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19697
  bin: 7.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34752
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30207
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4147
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 913
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 658
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: South Asian
population: European (Finnish)
reference allele: CT
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS

5-139421927-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139421927
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139421927
    reference: chr 5
allele count: 1
allele frequency: 1.444669170759896e-4
allele num: 6922
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.700+28A>G
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.700+28A>G
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.700+28A>G
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.700+28A>G
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.700+28A>G
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.700+28A>G
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.700+28A>G
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.700+28A>G
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21559
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1681
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1580
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17708
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2260
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3655
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP

5-139421941-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139421941
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139421941
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 10960
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.700+14T>A
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.700+14T>A
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.700+14T>A
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.700+14T>A
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.700+14T>A
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.700+14T>A
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.700+14T>A
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.700+14T>A
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 32127
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21841
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2425
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2380
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1674
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 912
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1195
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 856
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

5-139421944-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139421944
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139421944
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 12406
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.700+11C>G
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.700+11C>G
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.700+11C>G
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.700+11C>G
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.700+11C>G
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.700+11C>G
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.700+11C>G
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.700+11C>G
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2613
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20021
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33451
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2717
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 701
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1856
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1264
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

5-139421946-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139421946
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139421946
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 13024
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.700+9C>T
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.700+9C>T
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.700+9C>T
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.700+9C>T
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.700+9C>T
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.700+9C>T
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.700+9C>T
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.700+9C>T
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34148
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2764
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2805
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19077
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18022
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1333
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2954
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30570
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1484
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP

5-139421961-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139421961
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139421961
    reference: chr 5
allele count: 1
allele frequency: 4.462691895751518e-5
allele num: 22408
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.694G>C
  hgvsp: ENSP00000367483.4:p.Asp232His
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.694G>C
  hgvsp: ENSP00000351323.3:p.Asp232His
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.694G>C
  hgvsp: ENSP00000354910.1:p.Asp232His
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.694G>C
  hgvsp: ENSP00000378251.1:p.Asp232His
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.694G>C
  hgvsp: ENSP00000444235.1:p.Asp232His
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.694G>C
  hgvsp: ENSP00000289422.7:p.Asp232His
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.694G>C
  hgvsp: ENSP00000438753.1:p.Asp232His
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.694G>C
  hgvsp: ENSP00000289409.4:p.Asp232His
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5283
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9846
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39088
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4273
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 900
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1553
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1813
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Asp232His
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum

5-139421971-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139421971
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139421971
    reference: chr 5
allele count: 19
allele frequency: 6.653592940187702e-4
allele num: 28556
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.684C>T
  hgvsp: ENST00000378238.4:c.684C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.684C>T
  hgvsp: ENST00000545385.1:c.684C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.684C>T
  hgvsp: ENST00000358522.3:c.684C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.684C>T
  hgvsp: ENST00000394770.1:c.684C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.684C>T
  hgvsp: ENST00000289422.7:c.684C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.684C>T
  hgvsp: ENST00000541337.1:c.684C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.684C>T
  hgvsp: ENST00000361474.1:c.684C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.684C>T
  hgvsp: ENST00000289409.4:c.684C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7020
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1209
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 38991
  bin: 7.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 4964
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7066
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6916
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2025
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1842
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ile228Ile
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum

5-139421978-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139421978
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139421978
    reference: chr 5
allele count: 1
allele frequency: 3.066355942597816e-5
allele num: 32612
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.677G>A
  hgvsp: ENSP00000367483.4:p.Gly226Asp
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.677G>A
  hgvsp: ENSP00000351323.3:p.Gly226Asp
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.677G>A
  hgvsp: ENSP00000438753.1:p.Gly226Asp
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.677G>A
  hgvsp: ENSP00000289409.4:p.Gly226Asp
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.677G>A
  hgvsp: ENSP00000354910.1:p.Gly226Asp
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.677G>A
  hgvsp: ENSP00000378251.1:p.Gly226Asp
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.677G>A
  hgvsp: ENSP00000444235.1:p.Gly226Asp
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.677G>A
  hgvsp: ENSP00000289422.7:p.Gly226Asp
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5480
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8319
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1463
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38269
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5483
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 877
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1991
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8449
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gly226Asp
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum

5-139421982-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139421982
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139421982
    reference: chr 5
allele count: 1
allele frequency: 2.771157789724547e-5
allele num: 36086
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.673G>C
  hgvsp: ENSP00000351323.3:p.Val225Leu
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.673G>C
  hgvsp: ENSP00000367483.4:p.Val225Leu
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.673G>C
  hgvsp: ENSP00000438753.1:p.Val225Leu
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.673G>C
  hgvsp: ENSP00000289409.4:p.Val225Leu
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.673G>C
  hgvsp: ENSP00000444235.1:p.Val225Leu
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.673G>C
  hgvsp: ENSP00000354910.1:p.Val225Leu
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.673G>C
  hgvsp: ENSP00000289422.7:p.Val225Leu
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.673G>C
  hgvsp: ENSP00000378251.1:p.Val225Leu
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5850
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4662
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1472
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9098
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1680
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37584
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4668
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1689
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Val225Leu
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD

5-139421983-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139421983
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139421983
    reference: chr 5
allele count: 1
allele frequency: 2.721532767254518e-5
allele num: 36744
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.672G>A
  hgvsp: ENST00000541337.1:c.672G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.672G>A
  hgvsp: ENST00000545385.1:c.672G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.672G>A
  hgvsp: ENST00000378238.4:c.672G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.672G>A
  hgvsp: ENST00000289409.4:c.672G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.672G>A
  hgvsp: ENST00000394770.1:c.672G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.672G>A
  hgvsp: ENST00000361474.1:c.672G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.672G>A
  hgvsp: ENST00000289422.7:c.672G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.672G>A
  hgvsp: ENST00000358522.3:c.672G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4473
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9266
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5918
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1737
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37416
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1043
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 481
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4496
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Glu224Glu
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

5-139421985-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139421985
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139421985
    reference: chr 5
allele count: 1
allele frequency: 2.625636716903849e-5
allele num: 38086
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.670G>A
  hgvsp: ENSP00000438753.1:p.Glu224Lys
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.670G>A
  hgvsp: ENSP00000378251.1:p.Glu224Lys
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.670G>A
  hgvsp: ENSP00000351323.3:p.Glu224Lys
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.670G>A
  hgvsp: ENSP00000354910.1:p.Glu224Lys
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.670G>A
  hgvsp: ENSP00000444235.1:p.Glu224Lys
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.670G>A
  hgvsp: ENSP00000289422.7:p.Glu224Lys
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.670G>A
  hgvsp: ENSP00000289409.4:p.Glu224Lys
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.670G>A
  hgvsp: ENSP00000367483.4:p.Glu224Lys
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4150
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37150
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9688
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5960
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1803
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2217
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1057
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 793
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Glu224Lys
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: QD
site quality: MQ
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

5-139421994-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139421994
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139421994
    reference: chr 5
allele count: 7
allele frequency: 1.606978879706152e-4
allele num: 43560
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.661C>T
  hgvsp: ENSP00000444235.1:p.Leu221Phe
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.661C>T
  hgvsp: ENSP00000289422.7:p.Leu221Phe
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.661C>T
  hgvsp: ENSP00000351323.3:p.Leu221Phe
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.661C>T
  hgvsp: ENSP00000378251.1:p.Leu221Phe
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.661C>T
  hgvsp: ENSP00000289409.4:p.Leu221Phe
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.661C>T
  hgvsp: ENSP00000438753.1:p.Leu221Phe
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.661C>T
  hgvsp: ENSP00000354910.1:p.Leu221Phe
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.661C>T
  hgvsp: ENSP00000367483.4:p.Leu221Phe
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6157
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11602
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2986
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2093
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1858
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35619
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 785
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11709
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3051
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Leu221Phe
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: African
reference allele: G
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

5-139422004-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422004
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422004
    reference: chr 5
allele count: 1
allele frequency: 1.933413247747573e-5
allele num: 51722
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.651C>T
  hgvsp: ENST00000358522.3:c.651C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.651C>T
  hgvsp: ENST00000289409.4:c.651C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.651C>T
  hgvsp: ENST00000289422.7:c.651C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.651C>T
  hgvsp: ENST00000545385.1:c.651C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.651C>T
  hgvsp: ENST00000361474.1:c.651C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.651C>T
  hgvsp: ENST00000378238.4:c.651C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.651C>T
  hgvsp: ENST00000394770.1:c.651C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.651C>T
  hgvsp: ENST00000541337.1:c.651C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2798
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2007
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13924
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32179
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2576
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6661
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14548
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 678
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1033
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asn217Asn
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: FS

5-139422005-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422005
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422005
    reference: chr 5
allele count: 1
allele frequency: 1.880901327916338e-5
allele num: 53166
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.650A>T
  hgvsp: ENSP00000289409.4:p.Asn217Ile
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.650A>T
  hgvsp: ENSP00000438753.1:p.Asn217Ile
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.650A>T
  hgvsp: ENSP00000354910.1:p.Asn217Ile
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.650A>T
  hgvsp: ENSP00000367483.4:p.Asn217Ile
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.650A>T
  hgvsp: ENSP00000289422.7:p.Asn217Ile
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.650A>T
  hgvsp: ENSP00000378251.1:p.Asn217Ile
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.650A>T
  hgvsp: ENSP00000351323.3:p.Asn217Ile
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.650A>T
  hgvsp: ENSP00000444235.1:p.Asn217Ile
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2557
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6657
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14262
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1930
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31952
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2814
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 983
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2006
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1428
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31879
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Asn217Ile
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

5-139422014-A-AG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422014
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422015
    reference: chr 5
allele count: 1
allele frequency: 1.602461380680726e-5
allele num: 62404
alternate allele: AG
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.640dupC
  hgvsp: ENSP00000367483.4:p.Leu214ProfsTer19
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.640dupC
  hgvsp: ENSP00000354910.1:p.Leu214ProfsTer19
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.640dupC
  hgvsp: ENSP00000351323.3:p.Leu214ProfsTer19
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.640dupC
  hgvsp: ENSP00000289422.7:p.Leu214ProfsTer19
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.640dupC
  hgvsp: ENSP00000378251.1:p.Leu214ProfsTer19
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.640dupC
  hgvsp: ENSP00000438753.1:p.Leu214ProfsTer19
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.640dupC
  hgvsp: ENSP00000444235.1:p.Leu214ProfsTer19
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.640dupC
  hgvsp: ENSP00000289409.4:p.Leu214ProfsTer19
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27857
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3465
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6620
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17989
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1552
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1190
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu214ProfsTer19
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP

5-139422020-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422020
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422020
    reference: chr 5
allele count: 6
allele frequency: 8.843296781039972e-5
allele num: 67848
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.635C>T
  hgvsp: ENSP00000354910.1:p.Ala212Val
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.635C>T
  hgvsp: ENSP00000378251.1:p.Ala212Val
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.635C>T
  hgvsp: ENSP00000289409.4:p.Ala212Val
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.635C>T
  hgvsp: ENSP00000444235.1:p.Ala212Val
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.635C>T
  hgvsp: ENSP00000351323.3:p.Ala212Val
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.635C>T
  hgvsp: ENSP00000289422.7:p.Ala212Val
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.635C>T
  hgvsp: ENSP00000438753.1:p.Ala212Val
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.635C>T
  hgvsp: ENSP00000367483.4:p.Ala212Val
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25099
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6691
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19768
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4041
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3379
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1126
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1081
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2574
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2335
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala212Val
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum

5-139422021-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422021
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422021
    reference: chr 5
allele count: 6
allele frequency: 8.642295393656556e-5
allele num: 69426
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.634G>A
  hgvsp: ENSP00000378251.1:p.Ala212Thr
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.634G>A
  hgvsp: ENSP00000289422.7:p.Ala212Thr
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.634G>A
  hgvsp: ENSP00000438753.1:p.Ala212Thr
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.634G>A
  hgvsp: ENSP00000367483.4:p.Ala212Thr
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.634G>A
  hgvsp: ENSP00000444235.1:p.Ala212Thr
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.634G>A
  hgvsp: ENSP00000289409.4:p.Ala212Thr
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.634G>A
  hgvsp: ENSP00000351323.3:p.Ala212Thr
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.634G>A
  hgvsp: ENSP00000354910.1:p.Ala212Thr
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6697
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3411
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24636
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20134
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4145
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25313
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 777
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ala212Thr
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD

5-139422041-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422041
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422041
    reference: chr 5
allele count: 1
allele frequency: 1.089182241972727e-5
allele num: 91812
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.614T>C
  hgvsp: ENSP00000354910.1:p.Leu205Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.614T>C
  hgvsp: ENSP00000444235.1:p.Leu205Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.614T>C
  hgvsp: ENSP00000351323.3:p.Leu205Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.614T>C
  hgvsp: ENSP00000367483.4:p.Leu205Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.614T>C
  hgvsp: ENSP00000289422.7:p.Leu205Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.614T>C
  hgvsp: ENSP00000378251.1:p.Leu205Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.614T>C
  hgvsp: ENSP00000438753.1:p.Leu205Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.614T>C
  hgvsp: ENSP00000289409.4:p.Leu205Ser
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2135
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4617
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14222
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32177
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6061
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 532
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34862
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1749
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu205Ser
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ

5-139422045-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422045
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422045
    reference: chr 5
allele count: 2
allele frequency: 2.118958320089844e-5
allele num: 94386
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.610C>A
  hgvsp: ENSP00000289422.7:p.Pro204Thr
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.610C>A
  hgvsp: ENSP00000367483.4:p.Pro204Thr
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.610C>A
  hgvsp: ENSP00000351323.3:p.Pro204Thr
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.610C>A
  hgvsp: ENSP00000354910.1:p.Pro204Thr
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.610C>A
  hgvsp: ENSP00000378251.1:p.Pro204Thr
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.610C>A
  hgvsp: ENSP00000289409.4:p.Pro204Thr
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.610C>A
  hgvsp: ENSP00000444235.1:p.Pro204Thr
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.610C>A
  hgvsp: ENSP00000438753.1:p.Pro204Thr
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2185
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12900
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33059
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6669
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4290
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1471
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1223
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 559
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro204Thr
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

5-139422046-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422046
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422046
    reference: chr 5
allele count: 1
allele frequency: 1.050552590662689e-5
allele num: 95188
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.609G>A
  hgvsp: ENST00000289409.4:c.609G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.609G>A
  hgvsp: ENST00000361474.1:c.609G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.609G>A
  hgvsp: ENST00000545385.1:c.609G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.609G>A
  hgvsp: ENST00000394770.1:c.609G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.609G>A
  hgvsp: ENST00000358522.3:c.609G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.609G>A
  hgvsp: ENST00000378238.4:c.609G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.609G>A
  hgvsp: ENST00000289422.7:c.609G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.609G>A
  hgvsp: ENST00000541337.1:c.609G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33350
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4220
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12522
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6863
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2117
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1140
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 628
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 580
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gln203Gln
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: FS
site quality: DP

5-139422052-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422052
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422052
    reference: chr 5
allele count: 1
allele frequency: 9.939962625740527e-6
allele num: 100604
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.603G>C
  hgvsp: ENST00000289422.7:c.603G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.603G>C
  hgvsp: ENST00000358522.3:c.603G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.603G>C
  hgvsp: ENST00000378238.4:c.603G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.603G>C
  hgvsp: ENST00000545385.1:c.603G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.603G>C
  hgvsp: ENST00000541337.1:c.603G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.603G>C
  hgvsp: ENST00000394770.1:c.603G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.603G>C
  hgvsp: ENST00000361474.1:c.603G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.603G>C
  hgvsp: ENST00000289409.4:c.603G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7881
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36084
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1659
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9872
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3388
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40146
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10537
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr201Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
reference allele: C
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

5-139422052-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422052
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422052
    reference: chr 5
allele count: 1
allele frequency: 9.939962625740527e-6
allele num: 100604
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.603G>A
  hgvsp: ENST00000361474.1:c.603G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.603G>A
  hgvsp: ENST00000358522.3:c.603G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.603G>A
  hgvsp: ENST00000394770.1:c.603G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.603G>A
  hgvsp: ENST00000541337.1:c.603G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.603G>A
  hgvsp: ENST00000545385.1:c.603G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.603G>A
  hgvsp: ENST00000289422.7:c.603G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.603G>A
  hgvsp: ENST00000378238.4:c.603G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.603G>A
  hgvsp: ENST00000289409.4:c.603G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1659
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36084
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9872
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3388
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7881
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40146
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1176
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10537
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1295
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Thr201Thr
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

5-139422053-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422053
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422053
    reference: chr 5
allele count: 1
allele frequency: 9.833228445563248e-6
allele num: 101696
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.602C>T
  hgvsp: ENSP00000289409.4:p.Thr201Met
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.602C>T
  hgvsp: ENSP00000367483.4:p.Thr201Met
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.602C>T
  hgvsp: ENSP00000378251.1:p.Thr201Met
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.602C>T
  hgvsp: ENSP00000438753.1:p.Thr201Met
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.602C>T
  hgvsp: ENSP00000354910.1:p.Thr201Met
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.602C>T
  hgvsp: ENSP00000289422.7:p.Thr201Met
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.602C>T
  hgvsp: ENSP00000351323.3:p.Thr201Met
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.602C>T
  hgvsp: ENSP00000444235.1:p.Thr201Met
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9338
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1642
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3222
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1494
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8136
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36430
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40580
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 613
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Thr201Met
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: African
population: Latino
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

5-139422060-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422060
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422060
    reference: chr 5
allele count: 1
allele frequency: 9.216929656392862e-6
allele num: 108496
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.595G>C
  hgvsp: ENSP00000289409.4:p.Glu199Gln
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.595G>C
  hgvsp: ENSP00000354910.1:p.Glu199Gln
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.595G>C
  hgvsp: ENSP00000351323.3:p.Glu199Gln
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.595G>C
  hgvsp: ENSP00000378251.1:p.Glu199Gln
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.595G>C
  hgvsp: ENSP00000367483.4:p.Glu199Gln
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.595G>C
  hgvsp: ENSP00000438753.1:p.Glu199Gln
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.595G>C
  hgvsp: ENSP00000289422.7:p.Glu199Gln
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.595G>C
  hgvsp: ENSP00000444235.1:p.Glu199Gln
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6096
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38951
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2236
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9891
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2051
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45678
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3433
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Glu199Gln
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum

5-139422072-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422072
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422072
    reference: chr 5
allele count: 3
allele frequency: 2.628028803195683e-5
allele num: 114154
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.583A>G
  hgvsp: ENSP00000289409.4:p.Ile195Val
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.583A>G
  hgvsp: ENSP00000289422.7:p.Ile195Val
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.583A>G
  hgvsp: ENSP00000378251.1:p.Ile195Val
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.583A>G
  hgvsp: ENSP00000444235.1:p.Ile195Val
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.583A>G
  hgvsp: ENSP00000367483.4:p.Ile195Val
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.583A>G
  hgvsp: ENSP00000351323.3:p.Ile195Val
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.583A>G
  hgvsp: ENSP00000438753.1:p.Ile195Val
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.583A>G
  hgvsp: ENSP00000354910.1:p.Ile195Val
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11025
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1315
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2596
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3356
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41493
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49719
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ile195Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

5-139422074-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422074
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422074
    reference: chr 5
allele count: 1
allele frequency: 8.733929569591951e-6
allele num: 114496
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.581A>T
  hgvsp: ENSP00000444235.1:p.Tyr194Phe
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.581A>T
  hgvsp: ENSP00000354910.1:p.Tyr194Phe
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.581A>T
  hgvsp: ENSP00000351323.3:p.Tyr194Phe
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.581A>T
  hgvsp: ENSP00000378251.1:p.Tyr194Phe
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.581A>T
  hgvsp: ENSP00000289409.4:p.Tyr194Phe
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.581A>T
  hgvsp: ENSP00000367483.4:p.Tyr194Phe
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.581A>T
  hgvsp: ENSP00000438753.1:p.Tyr194Phe
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.581A>T
  hgvsp: ENSP00000289422.7:p.Tyr194Phe
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11174
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2658
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3185
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41503
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3573
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Tyr194Phe
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

5-139422090-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422090
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422090
    reference: chr 5
allele count: 1
allele frequency: 8.574858514834504e-6
allele num: 116620
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.565G>A
  hgvsp: ENSP00000354910.1:p.Glu189Lys
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.565G>A
  hgvsp: ENSP00000289422.7:p.Glu189Lys
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.565G>A
  hgvsp: ENSP00000367483.4:p.Glu189Lys
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.565G>A
  hgvsp: ENSP00000444235.1:p.Glu189Lys
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.565G>A
  hgvsp: ENSP00000351323.3:p.Glu189Lys
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.565G>A
  hgvsp: ENSP00000289409.4:p.Glu189Lys
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.565G>A
  hgvsp: ENSP00000378251.1:p.Glu189Lys
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.565G>A
  hgvsp: ENSP00000438753.1:p.Glu189Lys
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3020
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41766
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11836
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2158
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2701
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51276
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Glu189Lys
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: FS

5-139422093-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422093
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422093
    reference: chr 5
allele count: 1
allele frequency: 8.566484486096596e-6
allele num: 116734
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.562C>G
  hgvsp: ENSP00000438753.1:p.Leu188Val
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.562C>G
  hgvsp: ENSP00000444235.1:p.Leu188Val
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.562C>G
  hgvsp: ENSP00000289409.4:p.Leu188Val
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.562C>G
  hgvsp: ENSP00000378251.1:p.Leu188Val
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.562C>G
  hgvsp: ENSP00000289422.7:p.Leu188Val
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.562C>G
  hgvsp: ENSP00000354910.1:p.Leu188Val
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.562C>G
  hgvsp: ENSP00000351323.3:p.Leu188Val
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.562C>G
  hgvsp: ENSP00000367483.4:p.Leu188Val
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2080
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11859
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41675
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3035
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu188Val
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD

5-139422094-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422094
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422094
    reference: chr 5
allele count: 4
allele frequency: 3.42588944654756e-5
allele num: 116758
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.561G>A
  hgvsp: ENST00000541337.1:c.561G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.561G>A
  hgvsp: ENST00000358522.3:c.561G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.561G>A
  hgvsp: ENST00000289409.4:c.561G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.561G>A
  hgvsp: ENST00000361474.1:c.561G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.561G>A
  hgvsp: ENST00000545385.1:c.561G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.561G>A
  hgvsp: ENST00000378238.4:c.561G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.561G>A
  hgvsp: ENST00000289422.7:c.561G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.561G>A
  hgvsp: ENST00000394770.1:c.561G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3063
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1190
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2057
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11889
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41633
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 563
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Pro187Pro
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum

5-139422095-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422095
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422095
    reference: chr 5
allele count: 1
allele frequency: 8.563696776624533e-6
allele num: 116772
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.560C>A
  hgvsp: ENSP00000378251.1:p.Pro187Gln
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.560C>A
  hgvsp: ENSP00000444235.1:p.Pro187Gln
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.560C>A
  hgvsp: ENSP00000289409.4:p.Pro187Gln
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.560C>A
  hgvsp: ENSP00000367483.4:p.Pro187Gln
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.560C>A
  hgvsp: ENSP00000354910.1:p.Pro187Gln
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.560C>A
  hgvsp: ENSP00000289422.7:p.Pro187Gln
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.560C>A
  hgvsp: ENSP00000351323.3:p.Pro187Gln
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.560C>A
  hgvsp: ENSP00000438753.1:p.Pro187Gln
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11926
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1211
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2055
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41565
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3078
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51226
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Pro187Gln
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

5-139422102-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422102
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422102
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 116726
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.553T>A
  hgvsp: ENSP00000289422.7:p.Cys185Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.553T>A
  hgvsp: ENSP00000354910.1:p.Cys185Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.553T>A
  hgvsp: ENSP00000351323.3:p.Cys185Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.553T>A
  hgvsp: ENSP00000378251.1:p.Cys185Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.553T>A
  hgvsp: ENSP00000438753.1:p.Cys185Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.553T>A
  hgvsp: ENSP00000289409.4:p.Cys185Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.553T>A
  hgvsp: ENSP00000367483.4:p.Cys185Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.553T>A
  hgvsp: ENSP00000444235.1:p.Cys185Ser
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2061
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11977
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41262
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1366
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3113
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4111
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Cys185Ser
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP

5-139422103-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422103
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422103
    reference: chr 5
allele count: 6
allele frequency: 5.139450421434935e-5
allele num: 116744
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.552C>T
  hgvsp: ENST00000378238.4:c.552C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.552C>T
  hgvsp: ENST00000545385.1:c.552C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.552C>T
  hgvsp: ENST00000289422.7:c.552C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.552C>T
  hgvsp: ENST00000289409.4:c.552C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.552C>T
  hgvsp: ENST00000541337.1:c.552C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.552C>T
  hgvsp: ENST00000361474.1:c.552C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.552C>T
  hgvsp: ENST00000394770.1:c.552C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.552C>T
  hgvsp: ENST00000358522.3:c.552C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2055
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3111
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11990
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41261
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4115
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51091
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser184Ser
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

5-139422104-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422104
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422104
    reference: chr 5
allele count: 4
allele frequency: 3.425420042132666e-5
allele num: 116774
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.551C>T
  hgvsp: ENSP00000444235.1:p.Ser184Phe
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.551C>T
  hgvsp: ENSP00000351323.3:p.Ser184Phe
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.551C>T
  hgvsp: ENSP00000289422.7:p.Ser184Phe
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.551C>T
  hgvsp: ENSP00000367483.4:p.Ser184Phe
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.551C>T
  hgvsp: ENSP00000378251.1:p.Ser184Phe
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.551C>T
  hgvsp: ENSP00000438753.1:p.Ser184Phe
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.551C>T
  hgvsp: ENSP00000289409.4:p.Ser184Phe
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.551C>T
  hgvsp: ENSP00000354910.1:p.Ser184Phe
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12008
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1387
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3101
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41234
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 342
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser184Phe
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum

http://identifiers.org/exac.variant/5-139422111-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422111
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422111
    reference: chr 5
allele count: 3
allele frequency: 2.567394094993582e-5
allele num: 116850
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.544G>T
  hgvsp: ENSP00000289422.7:p.Val182Leu
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.544G>T
  hgvsp: ENSP00000438753.1:p.Val182Leu
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.544G>T
  hgvsp: ENSP00000354910.1:p.Val182Leu
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.544G>T
  hgvsp: ENSP00000351323.3:p.Val182Leu
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.544G>T
  hgvsp: ENSP00000444235.1:p.Val182Leu
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.544G>T
  hgvsp: ENSP00000378251.1:p.Val182Leu
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.544G>T
  hgvsp: ENSP00000289409.4:p.Val182Leu
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.544G>T
  hgvsp: ENSP00000367483.4:p.Val182Leu
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11989
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1977
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3117
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41092
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1590
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Val182Leu
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ

5-139422118-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422118
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422118
    reference: chr 5
allele count: 1
allele frequency: 8.572947207791094e-6
allele num: 116646
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.537G>A
  hgvsp: ENST00000545385.1:c.537G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.537G>A
  hgvsp: ENST00000289422.7:c.537G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.537G>A
  hgvsp: ENST00000289409.4:c.537G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.537G>A
  hgvsp: ENST00000361474.1:c.537G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.537G>A
  hgvsp: ENST00000541337.1:c.537G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.537G>A
  hgvsp: ENST00000394770.1:c.537G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.537G>A
  hgvsp: ENST00000378238.4:c.537G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.537G>A
  hgvsp: ENST00000358522.3:c.537G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11926
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2032
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3110
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40697
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Val179Val
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

5-139422126-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422126
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422126
    reference: chr 5
allele count: 1
allele frequency: 8.592541673827119e-6
allele num: 116380
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.529G>A
  hgvsp: ENSP00000367483.4:p.Glu177Lys
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.529G>A
  hgvsp: ENSP00000438753.1:p.Glu177Lys
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.529G>A
  hgvsp: ENSP00000351323.3:p.Glu177Lys
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.529G>A
  hgvsp: ENSP00000444235.1:p.Glu177Lys
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.529G>A
  hgvsp: ENSP00000289422.7:p.Glu177Lys
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.529G>A
  hgvsp: ENSP00000289409.4:p.Glu177Lys
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.529G>A
  hgvsp: ENSP00000378251.1:p.Glu177Lys
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.529G>A
  hgvsp: ENSP00000354910.1:p.Glu177Lys
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3114
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40374
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2086
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11897
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2035
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 566
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50106
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3432
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Glu177Lys
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum

5-139422129-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422129
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422129
    reference: chr 5
allele count: 1
allele frequency: 8.598008701184805e-6
allele num: 116306
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.526C>A
  hgvsp: ENSP00000378251.1:p.Arg176Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.526C>A
  hgvsp: ENSP00000289409.4:p.Arg176Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.526C>A
  hgvsp: ENSP00000289422.7:p.Arg176Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.526C>A
  hgvsp: ENSP00000351323.3:p.Arg176Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.526C>A
  hgvsp: ENSP00000354910.1:p.Arg176Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.526C>A
  hgvsp: ENSP00000438753.1:p.Arg176Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.526C>A
  hgvsp: ENSP00000444235.1:p.Arg176Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.526C>A
  hgvsp: ENSP00000367483.4:p.Arg176Ser
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40266
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2095
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11927
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2075
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3118
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg176Ser
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum

5-139422135-G-GC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422135
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422136
    reference: chr 5
allele count: 1
allele frequency: 8.642146017699115e-6
allele num: 115712
alternate allele: GC
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.519dupG
  hgvsp: ENSP00000378251.1:p.Leu174AlafsTer35
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.519dupG
  hgvsp: ENSP00000351323.3:p.Leu174AlafsTer35
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.519dupG
  hgvsp: ENSP00000367483.4:p.Leu174AlafsTer35
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.519dupG
  hgvsp: ENSP00000444235.1:p.Leu174AlafsTer35
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.519dupG
  hgvsp: ENSP00000438753.1:p.Leu174AlafsTer35
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.519dupG
  hgvsp: ENSP00000289422.7:p.Leu174AlafsTer35
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.519dupG
  hgvsp: ENSP00000354910.1:p.Leu174AlafsTer35
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.519dupG
  hgvsp: ENSP00000289409.4:p.Leu174AlafsTer35
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2113
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39778
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3166
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2243
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11935
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3456
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 2.75e1
  variant carriers: 1
hgvs: p.Leu174AlafsTer35
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum

5-139422141-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422141
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422141
    reference: chr 5
allele count: 1
allele frequency: 8.665811639918195e-6
allele num: 115396
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.514G>A
  hgvsp: ENSP00000289409.4:p.Gly172Arg
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.514G>A
  hgvsp: ENSP00000351323.3:p.Gly172Arg
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.514G>A
  hgvsp: ENSP00000354910.1:p.Gly172Arg
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.514G>A
  hgvsp: ENSP00000438753.1:p.Gly172Arg
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.514G>A
  hgvsp: ENSP00000367483.4:p.Gly172Arg
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.514G>A
  hgvsp: ENSP00000378251.1:p.Gly172Arg
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.514G>A
  hgvsp: ENSP00000289422.7:p.Gly172Arg
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.514G>A
  hgvsp: ENSP00000444235.1:p.Gly172Arg
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2273
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11947
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39503
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2272
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3153
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly172Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: African
reference allele: C
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/5-139422151-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422151
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422151
    reference: chr 5
allele count: 2
allele frequency: 1.739372434425659e-5
allele num: 114984
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.504G>T
  hgvsp: ENST00000289409.4:c.504G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.504G>T
  hgvsp: ENST00000361474.1:c.504G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.504G>T
  hgvsp: ENST00000394770.1:c.504G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.504G>T
  hgvsp: ENST00000378238.4:c.504G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.504G>T
  hgvsp: ENST00000358522.3:c.504G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.504G>T
  hgvsp: ENST00000545385.1:c.504G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.504G>T
  hgvsp: ENST00000289422.7:c.504G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.504G>T
  hgvsp: ENST00000541337.1:c.504G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3153
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2374
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39191
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11987
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro168Pro
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum

5-139422151-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422151
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422151
    reference: chr 5
allele count: 20
allele frequency: 1.739372434425659e-4
allele num: 114984
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.504G>A
  hgvsp: ENST00000361474.1:c.504G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.504G>A
  hgvsp: ENST00000289409.4:c.504G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.504G>A
  hgvsp: ENST00000289422.7:c.504G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.504G>A
  hgvsp: ENST00000541337.1:c.504G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.504G>A
  hgvsp: ENST00000378238.4:c.504G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.504G>A
  hgvsp: ENST00000394770.1:c.504G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.504G>A
  hgvsp: ENST00000358522.3:c.504G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.504G>A
  hgvsp: ENST00000545385.1:c.504G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2374
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39191
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11987
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3153
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49133
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro168Pro
num of homozygotes: 1
population: South Asian
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum

5-139422177-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422177
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422177
    reference: chr 5
allele count: 2
allele frequency: 1.811036456163863e-5
allele num: 110434
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.478T>C
  hgvsp: ENST00000545385.1:c.478T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.478T>C
  hgvsp: ENST00000289422.7:c.478T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.478T>C
  hgvsp: ENST00000358522.3:c.478T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.478T>C
  hgvsp: ENST00000541337.1:c.478T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.478T>C
  hgvsp: ENST00000378238.4:c.478T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.478T>C
  hgvsp: ENST00000361474.1:c.478T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.478T>C
  hgvsp: ENST00000289409.4:c.478T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.478T>C
  hgvsp: ENST00000394770.1:c.478T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3182
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4065
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3439
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1660
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11174
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35017
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 801
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3595
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2113
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu160Leu
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum

5-139422178-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422178
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422178
    reference: chr 5
allele count: 1
allele frequency: 9.050428990334141e-6
allele num: 110492
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.477G>C
  hgvsp: ENST00000289422.7:c.477G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.477G>C
  hgvsp: ENST00000545385.1:c.477G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.477G>C
  hgvsp: ENST00000541337.1:c.477G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.477G>C
  hgvsp: ENST00000358522.3:c.477G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.477G>C
  hgvsp: ENST00000394770.1:c.477G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.477G>C
  hgvsp: ENST00000378238.4:c.477G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.477G>C
  hgvsp: ENST00000289409.4:c.477G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.477G>C
  hgvsp: ENST00000361474.1:c.477G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3435
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3202
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11192
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34980
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1670
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4064
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 590
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6623
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3582
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala159Ala
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

5-139422182-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422182
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422182
    reference: chr 5
allele count: 1
allele frequency: 9.307520476545049e-6
allele num: 107440
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.473T>C
  hgvsp: ENSP00000378251.1:p.Val158Ala
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.473T>C
  hgvsp: ENSP00000289422.7:p.Val158Ala
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.473T>C
  hgvsp: ENSP00000438753.1:p.Val158Ala
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.473T>C
  hgvsp: ENSP00000351323.3:p.Val158Ala
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.473T>C
  hgvsp: ENSP00000444235.1:p.Val158Ala
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.473T>C
  hgvsp: ENSP00000354910.1:p.Val158Ala
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.473T>C
  hgvsp: ENSP00000289409.4:p.Val158Ala
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.473T>C
  hgvsp: ENSP00000367483.4:p.Val158Ala
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3278
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4376
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1934
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32403
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10760
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5071
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2366
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8437
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 774
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Val158Ala
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
reference allele: A
site quality: QD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/5-139422190-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422190
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422190
    reference: chr 5
allele count: 2
allele frequency: 2.177178811695805e-5
allele num: 91862
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.465G>T
  hgvsp: ENST00000361474.1:c.465G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.465G>T
  hgvsp: ENST00000289409.4:c.465G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.465G>T
  hgvsp: ENST00000289422.7:c.465G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.465G>T
  hgvsp: ENST00000378238.4:c.465G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.465G>T
  hgvsp: ENST00000358522.3:c.465G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.465G>T
  hgvsp: ENST00000545385.1:c.465G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.465G>T
  hgvsp: ENST00000541337.1:c.465G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.465G>T
  hgvsp: ENST00000394770.1:c.465G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20002
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2933
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2263
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12370
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4358
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10737
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6909
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 620
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19907
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 692
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1670
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ser155Ser
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

5-139422190-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422190
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422190
    reference: chr 5
allele count: 1
allele frequency: 1.088589405847902e-5
allele num: 91862
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.465G>C
  hgvsp: ENST00000289422.7:c.465G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.465G>C
  hgvsp: ENST00000358522.3:c.465G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.465G>C
  hgvsp: ENST00000361474.1:c.465G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.465G>C
  hgvsp: ENST00000545385.1:c.465G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.465G>C
  hgvsp: ENST00000289409.4:c.465G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.465G>C
  hgvsp: ENST00000541337.1:c.465G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.465G>C
  hgvsp: ENST00000394770.1:c.465G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.465G>C
  hgvsp: ENST00000378238.4:c.465G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6909
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2263
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4358
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10737
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2933
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12370
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20002
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 692
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2466
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1041
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser155Ser
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

5-139422199-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422199
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422199
    reference: chr 5
allele count: 1
allele frequency: 1.250156269533692e-5
allele num: 79990
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.456G>A
  hgvsp: ENST00000289422.7:c.456G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.456G>A
  hgvsp: ENST00000394770.1:c.456G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.456G>A
  hgvsp: ENST00000358522.3:c.456G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.456G>A
  hgvsp: ENST00000541337.1:c.456G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.456G>A
  hgvsp: ENST00000361474.1:c.456G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.456G>A
  hgvsp: ENST00000545385.1:c.456G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.456G>A
  hgvsp: ENST00000289409.4:c.456G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.456G>A
  hgvsp: ENST00000378238.4:c.456G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16595
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15370
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12421
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5247
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3993
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4963
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 720
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25691
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3463
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro152Pro
num of homozygotes: 0
population: African
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/5-139422206-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422206
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422206
    reference: chr 5
allele count: 1
allele frequency: 1.374532658895975e-5
allele num: 72752
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.449G>T
  hgvsp: ENSP00000378251.1:p.Arg150Leu
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.449G>T
  hgvsp: ENSP00000289409.4:p.Arg150Leu
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.449G>T
  hgvsp: ENSP00000354910.1:p.Arg150Leu
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.449G>T
  hgvsp: ENSP00000289422.7:p.Arg150Leu
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.449G>T
  hgvsp: ENSP00000438753.1:p.Arg150Leu
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.449G>T
  hgvsp: ENSP00000367483.4:p.Arg150Leu
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.449G>T
  hgvsp: ENSP00000351323.3:p.Arg150Leu
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.449G>T
  hgvsp: ENSP00000444235.1:p.Arg150Leu
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10281
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4109
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18044
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17138
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4923
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4737
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1951
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1261
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg150Leu
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ

5-139422210-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422210
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422210
    reference: chr 5
allele count: 1
allele frequency: 1.447387465624548e-5
allele num: 69090
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.445A>T
  hgvsp: ENSP00000354910.1:p.Thr149Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.445A>T
  hgvsp: ENSP00000438753.1:p.Thr149Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.445A>T
  hgvsp: ENSP00000378251.1:p.Thr149Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.445A>T
  hgvsp: ENSP00000351323.3:p.Thr149Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.445A>T
  hgvsp: ENSP00000289422.7:p.Thr149Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.445A>T
  hgvsp: ENSP00000444235.1:p.Thr149Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.445A>T
  hgvsp: ENSP00000289409.4:p.Thr149Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.445A>T
  hgvsp: ENSP00000367483.4:p.Thr149Ser
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3372
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4553
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5122
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19575
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9772
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17006
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1126
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 651
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3367
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 706
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 614
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Thr149Ser
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

5-139422215-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422215
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422215
    reference: chr 5
allele count: 1
allele frequency: 1.515702679762338e-5
allele num: 65976
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.440A>G
  hgvsp: ENSP00000378251.1:p.Asn147Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.440A>G
  hgvsp: ENSP00000289409.4:p.Asn147Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.440A>G
  hgvsp: ENSP00000289422.7:p.Asn147Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.440A>G
  hgvsp: ENSP00000444235.1:p.Asn147Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.440A>G
  hgvsp: ENSP00000367483.4:p.Asn147Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.440A>G
  hgvsp: ENSP00000354910.1:p.Asn147Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.440A>G
  hgvsp: ENSP00000351323.3:p.Asn147Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.440A>G
  hgvsp: ENSP00000438753.1:p.Asn147Ser
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4236
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3114
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8800
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5518
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20994
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16721
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3321
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29188
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10650
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asn147Ser
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum

5-139422229-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422229
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422229
    reference: chr 5
allele count: 1
allele frequency: 1.800439307190955e-5
allele num: 55542
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.426C>A
  hgvsp: ENST00000358522.3:c.426C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.426C>A
  hgvsp: ENST00000289422.7:c.426C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.426C>A
  hgvsp: ENST00000361474.1:c.426C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.426C>A
  hgvsp: ENST00000541337.1:c.426C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.426C>A
  hgvsp: ENST00000394770.1:c.426C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.426C>A
  hgvsp: ENST00000545385.1:c.426C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.426C>A
  hgvsp: ENST00000289409.4:c.426C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.426C>A
  hgvsp: ENST00000378238.4:c.426C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24454
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6572
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2419
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15255
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6770
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3876
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1807
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6948
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7692
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3018
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gly142Gly
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

5-139422231-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422231
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422231
    reference: chr 5
allele count: 20
allele frequency: 3.638480570513753e-4
allele num: 54968
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.424G>A
  hgvsp: ENSP00000378251.1:p.Gly142Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.424G>A
  hgvsp: ENSP00000289422.7:p.Gly142Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.424G>A
  hgvsp: ENSP00000367483.4:p.Gly142Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.424G>A
  hgvsp: ENSP00000438753.1:p.Gly142Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.424G>A
  hgvsp: ENSP00000289409.4:p.Gly142Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.424G>A
  hgvsp: ENSP00000444235.1:p.Gly142Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.424G>A
  hgvsp: ENSP00000351323.3:p.Gly142Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.424G>A
  hgvsp: ENSP00000354910.1:p.Gly142Ser
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14991
  bin: 1.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 3691
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6732
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24905
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6642
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2395
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7512
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3047
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1722
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 588
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7055
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly142Ser
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

5-139422232-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422232
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422232
    reference: chr 5
allele count: 3987
allele frequency: 7.243822674418604e-2
allele num: 55040
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.423C>T
  hgvsp: ENST00000358522.3:c.423C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.423C>T
  hgvsp: ENST00000545385.1:c.423C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.423C>T
  hgvsp: ENST00000394770.1:c.423C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.423C>T
  hgvsp: ENST00000378238.4:c.423C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.423C>T
  hgvsp: ENST00000289409.4:c.423C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.423C>T
  hgvsp: ENST00000289422.7:c.423C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.423C>T
  hgvsp: ENST00000541337.1:c.423C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.423C>T
  hgvsp: ENST00000361474.1:c.423C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 6479
  bin: 2.5e0
  variant carriers: 75
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 3695
  bin: 1.75e1
  variant carriers: 1185
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 6452
  bin: 2.25e1
  variant carriers: 501
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.25e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 25038
  bin: 7.5e0
  variant carriers: 937
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 14918
  bin: 1.25e1
  variant carriers: 1646
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 3.25e1
  variant carriers: 62
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.75e1
  variant carriers: 69
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 2330
  bin: 2.75e1
  variant carriers: 128
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 3.75e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 1065
  bin: 3.75e1
  variant carriers: 41
genotype quality: GenotypeQuality
  all individuals: 1279
  bin: 2.5e0
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 28921
  bin: 2.25e1
  variant carriers: 56
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 5.25e1
  variant carriers: 74
genotype quality: GenotypeQuality
  all individuals: 6643
  bin: 7.5e0
  variant carriers: 35
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 9.25e1
  variant carriers: 119
hgvs: p.Ala141Ala
num of homozygotes: 97
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ

5-139422237-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422237
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422237
    reference: chr 5
allele count: 1
allele frequency: 1.975581808842704e-5
allele num: 50618
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.418C>T
  hgvsp: ENSP00000289422.7:p.Pro140Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.418C>T
  hgvsp: ENSP00000354910.1:p.Pro140Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.418C>T
  hgvsp: ENSP00000438753.1:p.Pro140Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.418C>T
  hgvsp: ENSP00000289409.4:p.Pro140Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.418C>T
  hgvsp: ENSP00000444235.1:p.Pro140Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.418C>T
  hgvsp: ENSP00000351323.3:p.Pro140Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.418C>T
  hgvsp: ENSP00000378251.1:p.Pro140Ser
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.418C>T
  hgvsp: ENSP00000367483.4:p.Pro140Ser
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14170
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2393
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7059
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2331
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27285
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6166
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1022
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2613
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1486
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro140Ser
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: DP

5-139422237-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422237
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422237
    reference: chr 5
allele count: 1
allele frequency: 1.975581808842704e-5
allele num: 50618
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.418C>G
  hgvsp: ENSP00000289409.4:p.Pro140Ala
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.418C>G
  hgvsp: ENSP00000438753.1:p.Pro140Ala
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.418C>G
  hgvsp: ENSP00000354910.1:p.Pro140Ala
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.418C>G
  hgvsp: ENSP00000378251.1:p.Pro140Ala
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.418C>G
  hgvsp: ENSP00000444235.1:p.Pro140Ala
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.418C>G
  hgvsp: ENSP00000351323.3:p.Pro140Ala
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.418C>G
  hgvsp: ENSP00000367483.4:p.Pro140Ala
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.418C>G
  hgvsp: ENSP00000289422.7:p.Pro140Ala
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7059
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2331
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2393
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27285
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6166
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14170
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 707
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2613
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro140Ala
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

5-139422238-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422238
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422238
    reference: chr 5
allele count: 1
allele frequency: 2.003124874804695e-5
allele num: 49922
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.417C>G
  hgvsp: ENST00000545385.1:c.417C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.417C>G
  hgvsp: ENST00000394770.1:c.417C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.417C>G
  hgvsp: ENST00000378238.4:c.417C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.417C>G
  hgvsp: ENST00000289422.7:c.417C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.417C>G
  hgvsp: ENST00000358522.3:c.417C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.417C>G
  hgvsp: ENST00000289409.4:c.417C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.417C>G
  hgvsp: ENST00000361474.1:c.417C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.417C>G
  hgvsp: ENST00000541337.1:c.417C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2305
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14085
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7143
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2367
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27458
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6066
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 648
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2184
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 705
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2567
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7713
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Val139Val
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/5-139422241-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422241
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422241
    reference: chr 5
allele count: 1
allele frequency: 2.048256933349719e-5
allele num: 48822
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.414G>T
  hgvsp: ENST00000394770.1:c.414G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.414G>T
  hgvsp: ENST00000545385.1:c.414G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.414G>T
  hgvsp: ENST00000358522.3:c.414G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.414G>T
  hgvsp: ENST00000361474.1:c.414G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.414G>T
  hgvsp: ENST00000378238.4:c.414G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.414G>T
  hgvsp: ENST00000289409.4:c.414G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.414G>T
  hgvsp: ENST00000289422.7:c.414G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.414G>T
  hgvsp: ENST00000541337.1:c.414G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2136
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2359
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13722
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7292
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5940
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28026
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2238
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1418
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 708
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7458
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu138Leu
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQ

5-139422241-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422241
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422241
    reference: chr 5
allele count: 1
allele frequency: 2.048256933349719e-5
allele num: 48822
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.414G>A
  hgvsp: ENST00000289409.4:c.414G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.414G>A
  hgvsp: ENST00000289422.7:c.414G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.414G>A
  hgvsp: ENST00000545385.1:c.414G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.414G>A
  hgvsp: ENST00000378238.4:c.414G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.414G>A
  hgvsp: ENST00000541337.1:c.414G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.414G>A
  hgvsp: ENST00000394770.1:c.414G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.414G>A
  hgvsp: ENST00000358522.3:c.414G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.414G>A
  hgvsp: ENST00000361474.1:c.414G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28026
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2136
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2359
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5940
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13722
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7292
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33215
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7458
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2310
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1418
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Leu138Leu
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

5-139422247-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422247
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422247
    reference: chr 5
allele count: 5
allele frequency: 1.083235842107544e-4
allele num: 46158
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.408G>A
  hgvsp: ENST00000358522.3:c.408G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.408G>A
  hgvsp: ENST00000289409.4:c.408G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.408G>A
  hgvsp: ENST00000545385.1:c.408G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.408G>A
  hgvsp: ENST00000378238.4:c.408G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.408G>A
  hgvsp: ENST00000289422.7:c.408G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.408G>A
  hgvsp: ENST00000394770.1:c.408G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.408G>A
  hgvsp: ENST00000361474.1:c.408G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.408G>A
  hgvsp: ENST00000541337.1:c.408G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13169
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7887
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1783
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5644
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28725
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2303
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 810
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2366
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1436
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gln136Gln
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

5-139422271-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422271
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422271
    reference: chr 5
allele count: 1
allele frequency: 2.730151796439882e-5
allele num: 36628
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.384C>G
  hgvsp: ENST00000394770.1:c.384C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.384C>G
  hgvsp: ENST00000541337.1:c.384C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.384C>G
  hgvsp: ENST00000289422.7:c.384C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.384C>G
  hgvsp: ENST00000358522.3:c.384C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.384C>G
  hgvsp: ENST00000361474.1:c.384C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.384C>G
  hgvsp: ENST00000289409.4:c.384C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.384C>G
  hgvsp: ENST00000378238.4:c.384C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.384C>G
  hgvsp: ENST00000545385.1:c.384C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2234
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10425
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29553
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11685
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4628
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6492
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11888
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1577
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2757
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Pro128Pro
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ

5-139422286-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422286
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422286
    reference: chr 5
allele count: 1
allele frequency: 3.289690111191525e-5
allele num: 30398
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.369G>A
  hgvsp: ENST00000394770.1:c.369G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.369G>A
  hgvsp: ENST00000361474.1:c.369G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.369G>A
  hgvsp: ENST00000378238.4:c.369G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.369G>A
  hgvsp: ENST00000289409.4:c.369G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.369G>A
  hgvsp: ENST00000541337.1:c.369G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.369G>A
  hgvsp: ENST00000358522.3:c.369G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.369G>A
  hgvsp: ENST00000289422.7:c.369G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.369G>A
  hgvsp: ENST00000545385.1:c.369G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7700
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29290
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2198
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15146
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4379
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 747
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3000
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6290
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gln123Gln
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/5-139422297-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139422297
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 139422297
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 27228
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000438753
  ensembl transcript: ENST00000545385
  gene symbol: NRG2
  hgvsc: ENST00000545385.1:c.358G>T
  hgvsp: ENSP00000438753.1:p.Val120Leu
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289409
  ensembl transcript: ENST00000289409
  gene symbol: NRG2
  hgvsc: ENST00000289409.4:c.358G>T
  hgvsp: ENSP00000289409.4:p.Val120Leu
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000351323
  ensembl transcript: ENST00000358522
  gene symbol: NRG2
  hgvsc: ENST00000358522.3:c.358G>T
  hgvsp: ENSP00000351323.3:p.Val120Leu
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000354910
  ensembl transcript: ENST00000361474
  gene symbol: NRG2
  hgvsc: ENST00000361474.1:c.358G>T
  hgvsp: ENSP00000354910.1:p.Val120Leu
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000444235
  ensembl transcript: ENST00000541337
  gene symbol: NRG2
  hgvsc: ENST00000541337.1:c.358G>T
  hgvsp: ENSP00000444235.1:p.Val120Leu
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000378251
  ensembl transcript: ENST00000394770
  gene symbol: NRG2
  hgvsc: ENST00000394770.1:c.358G>T
  hgvsp: ENSP00000378251.1:p.Val120Leu
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000289422
  ensembl transcript: ENST00000289422
  gene symbol: NRG2
  hgvsc: ENST00000289422.7:c.358G>T
  hgvsp: ENSP00000289422.7:p.Val120Leu
  variant of: http://identifiers.org/hgnc/7998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158458
  ensembl protein: ENSP00000367483
  ensembl transcript: ENST00000378238
  gene symbol: NRG2
  hgvsc: ENST00000378238.4:c.358G>T
  hgvsp: ENSP00000367483.4:p.Val120Leu
  variant of: http://identifiers.org/hgnc/7998
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4212
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6401
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2187
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18207
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27677
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Val120Leu
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 7853
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 973
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5183
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 959
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4186
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 260
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4729
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9346
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5054
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4072
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.179884030169595e-5
allele num: 45874
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6408
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 538
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.77e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.823e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 7.95159e5

BaseQRankSum
type: SiteQuality
SIO_000300: 2.13e0

MQ
type: SiteQuality
SIO_000300: 5.185e1

MQRankSum
type: SiteQuality
SIO_000300: -3.799e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.01e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.08e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.595e-1

GenotypeQuality
all individuals: 5118
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10516
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 957
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2279
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7814
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 422
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4202
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3849
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 524
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6258
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.630523398010761e-4
allele num: 12266
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4952
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9212
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45120
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3956
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.91e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.14e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 4.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.11e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.29e0

QD
type: SiteQuality
SIO_000300: 1.371e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 7.89547e5

GenotypeQuality
all individuals: 291
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1919
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1566
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7808
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3871
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2845
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3744
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 961
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3561
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2365
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6134
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12156
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9084
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.246484252145392e-5
allele num: 44514
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3906
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 510
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.63e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.33e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 7.8745e5

VQSLOD
type: SiteQuality
SIO_000300: 4.17e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.1e0

MQRankSum
type: SiteQuality
SIO_000300: -5.28e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.193e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.5e-2

GenotypeQuality
all individuals: 6483
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2845
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3871
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5053
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1566
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9782
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 313
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6134
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3906
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.100836635843241e-4
allele num: 9084
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44514
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12156
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 510
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.1e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.5e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.63e-2

MQRankSum
type: SiteQuality
SIO_000300: -5.28e-1

QD
type: SiteQuality
SIO_000300: 1.193e1

VQSLOD
type: SiteQuality
SIO_000300: 4.17e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.33e-1

DP
type: SiteQuality
SIO_000300: 7.8745e5

GenotypeQuality
all individuals: 8025
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3523
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 718
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 308
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 204
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2564
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.22e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.596e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.93e-2

DP
type: SiteQuality
SIO_000300: 2.3661e5

MQRankSum
type: SiteQuality
SIO_000300: -1.307e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.61e-1

QD
type: SiteQuality
SIO_000300: 7.74e0

GenotypeQuality
all individuals: 5887
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9705
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 694
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 46
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 932
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 332
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 212
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2838
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.28e0

DP
type: SiteQuality
SIO_000300: 2.45436e5

BaseQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.33e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

QD
type: SiteQuality
SIO_000300: 8.07e0

GenotypeQuality
all individuals: 5174
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30867
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2777
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3881
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11311
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 930
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 330
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 3.508771929824561e-4
allele num: 2850
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 222
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.656e0

DP
type: SiteQuality
SIO_000300: 2.58408e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 8.48e0

VQSLOD
type: SiteQuality
SIO_000300: 2.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.54e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.46e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.7e-1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1034
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3452
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1062
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 260
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 410
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

FS
type: SiteQuality
SIO_000300: 4.354e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.41e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.978e-1

MQRankSum
type: SiteQuality
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DP
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SIO_000300: 2.79131e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.73e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

QD
type: SiteQuality
SIO_000300: 1.071e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1034
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 3.846153846153846e-3
allele num: 260
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 410
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1062
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3452
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

FS
type: SiteQuality
SIO_000300: 4.354e0

VQSLOD
type: SiteQuality
SIO_000300: -8.978e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.22e-1

DP
type: SiteQuality
SIO_000300: 2.79131e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.73e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

QD
type: SiteQuality
SIO_000300: 1.071e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.41e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 1.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

East Asian
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allele count: 4
allele frequency: 9.345794392523364e-3
allele num: 428
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3494
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1068
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 278
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 1044
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 68
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.087e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

DP
type: SiteQuality
SIO_000300: 2.83368e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.33e-1

MQ
type: SiteQuality
SIO_000300: 6.063e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.69e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.18e0

FS
type: SiteQuality
SIO_000300: 1.095e0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 154
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 84
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3742
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 306
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 68
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1118
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 466
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.787346221441124e-4
allele num: 1138
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.176e0

VQSLOD
type: SiteQuality
SIO_000300: -1.597e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.39e-2

QD
type: SiteQuality
SIO_000300: 1.438e1

MQRankSum
type: SiteQuality
SIO_000300: 1.64e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.87e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.57e0

DP
type: SiteQuality
SIO_000300: 2.97175e5

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 1808
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 792
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 540
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1666
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5870
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 98
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.051e1

FS
type: SiteQuality
SIO_000300: 5.663e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.88e-2

QD
type: SiteQuality
SIO_000300: 1.475e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.156e0

VQSLOD
type: SiteQuality
SIO_000300: -1.031e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.29e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.52e-1

DP
type: SiteQuality
SIO_000300: 3.87142e5

ClippingRankSum
type: SiteQuality
SIO_000300: 5.53e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2070
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1842
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 216
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 108
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6682
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.22e-1

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2158
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7008
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 660
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 242
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 1898
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 1472
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 8.327781479013991e-5
allele num: 12008
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 598
num of homozygotes: 0

MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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DP
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SIO_000300: 5.16041e5

BaseQRankSum
type: SiteQuality
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FS
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.04e-2

MQRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 28
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variant carriers: 19

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1630
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 4.23728813559322e-3
allele num: 236
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 810
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 1830
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African
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allele count: 1
allele frequency: 3.121098626716604e-4
allele num: 3204
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 5630
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European (Non-Finnish)
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allele count: 17
allele frequency: 1.117245005257624e-3
allele num: 15216
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.58e0

MQRankSum
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SIO_000300: 7.6e-2

BaseQRankSum
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SIO_000300: -8.129999999999999e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.046e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 5.66806e5

ClippingRankSum
type: SiteQuality
SIO_000300: -2.71e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 3508
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 1860
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 4.734848484848485e-4
allele num: 2112
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 958
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 17382
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6518
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.31e0

VQSLOD
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SIO_000300: -1.242e0

InbreedingCoeff
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SIO_000300: -1.39e-2

MQ
type: SiteQuality
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DP
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SIO_000300: 6.04542e5

QD
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FS
type: SiteQuality
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ReadPosRankSum
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ClippingRankSum
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SIO_000300: 2.18e0

MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 1.387347391786903e-4
allele num: 7208
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 19178
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2368
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2138
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 302
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3740
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1152
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.23e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.47e0

DP
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MQRankSum
type: SiteQuality
SIO_000300: -1.941e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.68e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.17e-2

FS
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MQ
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SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.2e-2

QD
type: SiteQuality
SIO_000300: 2.67e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1192
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7334
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 304
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2428
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 3778
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.119279205487868e-5
allele num: 19534
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 2174
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QD
type: SiteQuality
SIO_000300: 2.538e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.659999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.82e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.188e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.29e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 5.316e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.16e-2

DP
type: SiteQuality
SIO_000300: 6.34545e5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2518
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1264
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2282
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3884
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.941199723292816e-5
allele num: 20238
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 310
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.073e1

MQ
type: SiteQuality
SIO_000300: 5.787e1

DP
type: SiteQuality
SIO_000300: 6.44656e5

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.197e0

MQRankSum
type: SiteQuality
SIO_000300: 5.46e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.07e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e-1

BaseQRankSum
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SIO_000300: -1.58e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8540
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2910
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 2.147028512538646e-4
allele num: 23288
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 342
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 7.283321194464676e-4
allele num: 2746
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.932e0

FS
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SIO_000300: 6.424e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.04e-1

MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 8.28e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1892
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4814
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 27948
num of homozygotes: 0

South Asian
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allele frequency: 1.042970379641218e-4
allele num: 9588
num of homozygotes: 0

Latino
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Other
type: Population
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allele frequency: 0.0e0
allele num: 406
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East Asian
type: Population
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ClippingRankSum
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SIO_000300: -7.61e-1

MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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DP
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 8.99e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 1992
num of homozygotes: 0

African
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Latino
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South Asian
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Other
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European (Non-Finnish)
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allele frequency: 0.0e0
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East Asian
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MQRankSum
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InbreedingCoeff
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VQSLOD
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DP
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FS
type: SiteQuality
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MQ
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ClippingRankSum
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BaseQRankSum
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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African
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South Asian
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Other
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European (Non-Finnish)
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allele num: 34286
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European (Finnish)
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
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FS
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ClippingRankSum
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MQRankSum
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 5

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 4778
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.882530120481928e-4
allele num: 5312
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5922
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2740
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11146
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 1.334472082844027e-4
allele num: 37468
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 482
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.65e-1

QD
type: SiteQuality
SIO_000300: 1.029e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.93e-1

DP
type: SiteQuality
SIO_000300: 8.83498e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.6e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.883e0

FS
type: SiteQuality
SIO_000300: 7.781e0

MQ
type: SiteQuality
SIO_000300: 5.951e1

MQRankSum
type: SiteQuality
SIO_000300: 5.8e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 6

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 6010
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 5534
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 1.216051884880422e-3
allele num: 4934
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11320
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2832
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38304
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 492
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.181e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.17e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.8e-3

MQRankSum
type: SiteQuality
SIO_000300: -5.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.17e-1

DP
type: SiteQuality
SIO_000300: 8.91006e5

VQSLOD
type: SiteQuality
SIO_000300: 5.39e-1

FS
type: SiteQuality
SIO_000300: 6.486e0

QD
type: SiteQuality
SIO_000300: 8.02e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4046
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 7646
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 13306
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8470
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.956028479774665e-5
allele num: 51124
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.41e0

BaseQRankSum
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SIO_000300: 4.69e0

VQSLOD
type: SiteQuality
SIO_000300: -4.505e-1

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.23e-1

FS
type: SiteQuality
SIO_000300: 8.506e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.87e-1

DP
type: SiteQuality
SIO_000300: 1.090607e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 658
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4178
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.948982601002654e-4
allele num: 6782
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52542
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8860
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7834
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.65e-1

FS
type: SiteQuality
SIO_000300: 9.935e0

QD
type: SiteQuality
SIO_000300: 9.1e0

VQSLOD
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SIO_000300: -1.178e0

DP
type: SiteQuality
SIO_000300: 1.117881e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.422e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.58e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4232
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6842
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 664
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13590
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8952
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.885725061286065e-5
allele num: 53030
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.504e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.659e0

ClippingRankSum
type: SiteQuality
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ReadPosRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-3

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.702e0

DP
type: SiteQuality
SIO_000300: 1.126239e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.785267968722105e-5
allele num: 56014
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 706
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4562
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7274
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9634
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.878e1

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.184702e6

ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.071e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56014
num of homozygotes: 0

South Asian
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East Asian
type: Population
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African
type: Population
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allele frequency: 1.210653753026634e-4
allele num: 8260
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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ClippingRankSum
type: SiteQuality
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MQRankSum
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QD
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FS
type: SiteQuality
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ReadPosRankSum
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MQ
type: SiteQuality
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BaseQRankSum
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VQSLOD
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 1
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allele num: 56604
num of homozygotes: 0

South Asian
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East Asian
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Other
type: Population
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African
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Latino
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European (Finnish)
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InbreedingCoeff
type: SiteQuality
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QD
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MQRankSum
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VQSLOD
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DP
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BaseQRankSum
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FS
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ClippingRankSum
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MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
type: Population
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Other
type: Population
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allele num: 768
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Latino
type: Population
allele count: 1
allele frequency: 9.484066767830046e-5
allele num: 10544
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East Asian
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South Asian
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.85e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

DP
type: SiteQuality
SIO_000300: 1.273269e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.131e0

VQSLOD
type: SiteQuality
SIO_000300: -1.632e0

MQ
type: SiteQuality
SIO_000300: 5.85e1

FS
type: SiteQuality
SIO_000300: 5.17e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.139999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.789e1

MQRankSum
type: SiteQuality
SIO_000300: -1.39e-1

GenotypeQuality
all individuals: 3875
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3759
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 403
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 422
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 539
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 212
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.757072180641888e-5
allele num: 63064
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11094
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8322
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9440
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15856
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.33774e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.46e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.52e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

FS
type: SiteQuality
SIO_000300: 7.4e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.99e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.8e-1

QD
type: SiteQuality
SIO_000300: 1.556e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.54e-1

GenotypeQuality
all individuals: 102
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 287
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GenotypeQuality
all individuals: 48
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 3.75e1
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GenotypeQuality
all individuals: 416
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 18
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3895
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 343
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 540
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49813
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11122
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8356
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63248
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.055743243243243e-4
allele num: 9472
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5584
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15892
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.52e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -4.37e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.37e-1

QD
type: SiteQuality
SIO_000300: 1.264e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.93e0

DP
type: SiteQuality
SIO_000300: 1.342587e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.37e0

GenotypeQuality
all individuals: 200
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 304
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variant carriers: 0

GenotypeQuality
all individuals: 152
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GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
all individuals: 161
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variant carriers: 0

GenotypeQuality
all individuals: 81
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GenotypeQuality
all individuals: 13
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variant carriers: 1

GenotypeQuality
all individuals: 85
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variant carriers: 0

GenotypeQuality
all individuals: 288
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variant carriers: 0

GenotypeQuality
all individuals: 558
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4078
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11320
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9670
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16302
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.558069240597052e-5
allele num: 64182
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5810
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -5.639999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.72e-1

DP
type: SiteQuality
SIO_000300: 1.368054e6

QD
type: SiteQuality
SIO_000300: 1.333e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.464e0

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 51209
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 567
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variant carriers: 0

GenotypeQuality
all individuals: 2687
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variant carriers: 0

GenotypeQuality
all individuals: 155
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variant carriers: 0

GenotypeQuality
all individuals: 310
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variant carriers: 0

GenotypeQuality
all individuals: 225
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GenotypeQuality
all individuals: 91
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variant carriers: 0

GenotypeQuality
all individuals: 88
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variant carriers: 0

GenotypeQuality
all individuals: 12
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variant carriers: 1

GenotypeQuality
all individuals: 286
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variant carriers: 0

GenotypeQuality
all individuals: 4101
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variant carriers: 0

GenotypeQuality
all individuals: 122
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variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16330
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9678
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11340
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.557438325442313e-5
allele num: 64208
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5838
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8508
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.56e0

MQRankSum
type: SiteQuality
SIO_000300: 6.5e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.368112e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.62e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.320000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.923e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.52e-1

QD
type: SiteQuality
SIO_000300: 1.132e1

GenotypeQuality
all individuals: 278
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 89
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variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 4

GenotypeQuality
all individuals: 85
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variant carriers: 0

GenotypeQuality
all individuals: 150
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variant carriers: 0

GenotypeQuality
all individuals: 4092
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GenotypeQuality
all individuals: 99
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GenotypeQuality
all individuals: 2681
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GenotypeQuality
all individuals: 51253
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variant carriers: 0

GenotypeQuality
all individuals: 84
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variant carriers: 0

GenotypeQuality
all individuals: 306
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variant carriers: 0

GenotypeQuality
all individuals: 22
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variant carriers: 0

GenotypeQuality
all individuals: 383
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11342
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5846
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16324
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9690
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.228977201943441e-5
allele num: 64216
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

FS
type: SiteQuality
SIO_000300: 6.37e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.2e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.6e-1

QD
type: SiteQuality
SIO_000300: 1.223e1

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.964e0

DP
type: SiteQuality
SIO_000300: 1.369532e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.03e-1

GenotypeQuality
all individuals: 155
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
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variant carriers: 0

GenotypeQuality
all individuals: 222
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variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
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GenotypeQuality
all individuals: 2706
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GenotypeQuality
all individuals: 4115
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variant carriers: 0

GenotypeQuality
all individuals: 73
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GenotypeQuality
all individuals: 560
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GenotypeQuality
all individuals: 21
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GenotypeQuality
all individuals: 144
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16340
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9668
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5848
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64216
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.807468733485996e-5
allele num: 11354
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.369264e6

MQRankSum
type: SiteQuality
SIO_000300: -2.38e-1

MQ
type: SiteQuality
SIO_000300: 5.799e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.67e-1

FS
type: SiteQuality
SIO_000300: 1.693e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.59e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.182e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

QD
type: SiteQuality
SIO_000300: 9.34e0

GenotypeQuality
all individuals: 382
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 51049
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 2.75e1
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GenotypeQuality
all individuals: 119
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 179
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GenotypeQuality
all individuals: 559
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GenotypeQuality
all individuals: 14
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GenotypeQuality
all individuals: 11
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GenotypeQuality
all individuals: 2804
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11376
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16364
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9632
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64118
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5892
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.61e-1

FS
type: SiteQuality
SIO_000300: 7.782e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.29e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.041e0

QD
type: SiteQuality
SIO_000300: 7.28e0

MQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.76e-1

DP
type: SiteQuality
SIO_000300: 1.367934e6

GenotypeQuality
all individuals: 151
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2805
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 153
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 3.25e1
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GenotypeQuality
all individuals: 340
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 559
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 5.273334505185445e-4
allele num: 11378
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9628
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64122
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16368
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.26e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.89e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.194e0

FS
type: SiteQuality
SIO_000300: 2.812e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.24e-1

DP
type: SiteQuality
SIO_000300: 1.368334e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.0e-1

QD
type: SiteQuality
SIO_000300: 1.184e1

GenotypeQuality
all individuals: 4117
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2820
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 8.75e1
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GenotypeQuality
all individuals: 559
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 8.25e1
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GenotypeQuality
all individuals: 107
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 9.25e1
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GenotypeQuality
all individuals: 51074
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 9.75e1
variant carriers: 4

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.038853106170787e-4
allele num: 9626
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.187648456057007e-3
allele num: 842
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11382
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.118276216907294e-5
allele num: 64138
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16376
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

MQ
type: SiteQuality
SIO_000300: 5.959e1

FS
type: SiteQuality
SIO_000300: 2.823e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.793e0

VQSLOD
type: SiteQuality
SIO_000300: 1.2e0

DP
type: SiteQuality
SIO_000300: 1.368021e6

QD
type: SiteQuality
SIO_000300: 1.271e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.07e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.1e-2

GenotypeQuality
all individuals: 88
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5960
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11396
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.677706052951633e-5
allele num: 64134
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.41e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.57e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.81e-1

QD
type: SiteQuality
SIO_000300: 1.654e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.96e-1

DP
type: SiteQuality
SIO_000300: 1.366959e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 566
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5998
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.563135023603339e-5
allele num: 63974
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9556
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16386
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.24e0

VQSLOD
type: SiteQuality
SIO_000300: 4.89e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.121e1

MQ
type: SiteQuality
SIO_000300: 5.958e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -5.99e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.39e-1

DP
type: SiteQuality
SIO_000300: 1.361872e6

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 83
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GenotypeQuality
all individuals: 4082
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9468
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8476
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6016
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.567005139776858e-5
allele num: 63816
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11394
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16366
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

QD
type: SiteQuality
SIO_000300: 1.103e1

DP
type: SiteQuality
SIO_000300: 1.358271e6

MQRankSum
type: SiteQuality
SIO_000300: 1.03e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.35e-1

MQ
type: SiteQuality
SIO_000300: 5.927e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.79e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.28e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.89e-1

GenotypeQuality
all individuals: 564
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 431
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 50089
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variant carriers: 0

GenotypeQuality
all individuals: 4089
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11388
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9436
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.567742137773179e-5
allele num: 63786
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8474
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6016
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16366
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.184e1

DP
type: SiteQuality
SIO_000300: 1.357219e6

BaseQRankSum
type: SiteQuality
SIO_000300: 8.33e-1

FS
type: SiteQuality
SIO_000300: 6.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.371e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e0

VQSLOD
type: SiteQuality
SIO_000300: -1.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.9e-1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 9
bin: 9.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11374
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.576391954095466e-5
allele num: 63436
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8478
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16352
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9232
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5998
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.985e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.0e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.354329e6

FS
type: SiteQuality
SIO_000300: 1.2513e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.73e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.764e0

QD
type: SiteQuality
SIO_000300: 2.0e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.73e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.579928587227857e-5
allele num: 63294
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8460
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11356
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16334
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5998
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9114
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.348333e6

MQ
type: SiteQuality
SIO_000300: 5.97e1

FS
type: SiteQuality
SIO_000300: 1.057e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.58e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.23e-1

QD
type: SiteQuality
SIO_000300: 9.4e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.9e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.74e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.59e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16300
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5982
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11330
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63088
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9002
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.369668246445498e-4
allele num: 8440
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 3.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.0e-2

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.344764e6

MQRankSum
type: SiteQuality
SIO_000300: 1.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.8e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 13
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GenotypeQuality
all individuals: 30
bin: 9.75e1
variant carriers: 19

South Asian
type: Population
allele count: 19
allele frequency: 1.165644171779141e-3
allele num: 16300
num of homozygotes: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9002
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8440
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11330
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.187648456057007e-3
allele num: 842
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63088
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5982
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.0e-2

ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.185e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.96e-1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.344764e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 5.8e-1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 80
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8166
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15742
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11026
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.429543245869776e-4
allele num: 8232
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60818
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.4e-2

MQ
type: SiteQuality
SIO_000300: 5.918e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.09e-1

QD
type: SiteQuality
SIO_000300: 1.011e1

DP
type: SiteQuality
SIO_000300: 1.282045e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.97e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.6e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.19e-1

GenotypeQuality
all individuals: 2129
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60852
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.215362177929023e-4
allele num: 8228
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11026
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8186
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5658
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15744
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.39e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.282269e6

ClippingRankSum
type: SiteQuality
SIO_000300: 8.6e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.582e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 5.16e0

VQSLOD
type: SiteQuality
SIO_000300: -3.888e-1

QD
type: SiteQuality
SIO_000300: 1.334e1

GenotypeQuality
all individuals: 432
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.464124111182935e-5
allele num: 15470
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7802
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8044
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59232
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 778
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10760
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5354
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.391e1

DP
type: SiteQuality
SIO_000300: 1.249349e6

FS
type: SiteQuality
SIO_000300: 2.1637e1

MQRankSum
type: SiteQuality
SIO_000300: -8.91e-1

MQ
type: SiteQuality
SIO_000300: 5.898e1

VQSLOD
type: SiteQuality
SIO_000300: -3.15e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.0e-3

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.8e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.2e0

GenotypeQuality
all individuals: 435
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 2.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4426
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8970
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.977926342023023e-5
allele num: 50558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 682
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14136
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.567398119122257e-4
allele num: 6380
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6710
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.03e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.49e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.9e0

QD
type: SiteQuality
SIO_000300: 9.039999999999999e0

DP
type: SiteQuality
SIO_000300: 1.02358e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.929999999999999e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.67e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.96e-1

GenotypeQuality
all individuals: 1670
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 10
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6710
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4426
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8970
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6380
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 682
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.074136955291455e-5
allele num: 14136
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.96e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.49e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.67e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 9.039999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: 3.9e0

DP
type: SiteQuality
SIO_000300: 1.02358e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.929999999999999e-1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
all individuals: 126
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variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5458
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13088
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3716
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5728
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.280501710376283e-5
allele num: 43850
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 5.5e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.64009e5

BaseQRankSum
type: SiteQuality
SIO_000300: 2.38e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.18e-2

MQRankSum
type: SiteQuality
SIO_000300: -6.75e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.78e-1

QD
type: SiteQuality
SIO_000300: 9.23e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.95e-1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5152
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 552
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6708
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.51610305958132e-5
allele num: 39744
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3188
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.94238e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.37e-2

FS
type: SiteQuality
SIO_000300: 2.969e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.53e-1

QD
type: SiteQuality
SIO_000300: 7.81e0

MQRankSum
type: SiteQuality
SIO_000300: -9.05e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.57e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.71e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.955e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 802
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4668
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4848
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 526
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.652801358234295e-5
allele num: 37696
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6360
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2786
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12206
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.39e0

QD
type: SiteQuality
SIO_000300: 1.362e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.49e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.27e0

VQSLOD
type: SiteQuality
SIO_000300: -1.26e-2

MQRankSum
type: SiteQuality
SIO_000300: 8.82e-1

DP
type: SiteQuality
SIO_000300: 7.63756e5

ClippingRankSum
type: SiteQuality
SIO_000300: -3.68e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 789
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GenotypeQuality
all individuals: 6
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11958
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5990
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4416
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.790022878187601e-5
allele num: 35842
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.48e-2

FS
type: SiteQuality
SIO_000300: 1.663e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.076e1

DP
type: SiteQuality
SIO_000300: 7.3736e5

MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.25e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.24e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.4e-2

GenotypeQuality
all individuals: 545
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 682
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1596
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29199
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1081
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2619
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 694
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 553
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3059
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11066
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1912
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.741228070175438e-4
allele num: 3648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4800
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 446
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30032
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.67e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.27e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.93e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.42e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.89e-2

DP
type: SiteQuality
SIO_000300: 6.77512e5

VQSLOD
type: SiteQuality
SIO_000300: 1.85e0

GenotypeQuality
all individuals: 2996
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 670
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 697
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 29519
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1583
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 803
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 35
bin: 9.75e1
variant carriers: 20

GenotypeQuality
all individuals: 529
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2735
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 436
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1898
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.124044180118947e-4
allele num: 4708
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 29688
num of homozygotes: 0

African
type: Population
allele count: 19
allele frequency: 5.263157894736842e-3
allele num: 3610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11004
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.83e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.13e0

MQRankSum
type: SiteQuality
SIO_000300: 1.13e-1

FS
type: SiteQuality
SIO_000300: 1.24e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 6.7188e5

QD
type: SiteQuality
SIO_000300: 1.359e1

VQSLOD
type: SiteQuality
SIO_000300: 3.91e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.8e-2

GenotypeQuality
all individuals: 2229
bin: 3.25e1
variant carriers: 40

GenotypeQuality
all individuals: 337
bin: 4.25e1
variant carriers: 31

GenotypeQuality
all individuals: 1475
bin: 1.25e1
variant carriers: 45

GenotypeQuality
all individuals: 107
bin: 7.75e1
variant carriers: 68

GenotypeQuality
all individuals: 7361
bin: 6.25e1
variant carriers: 76

GenotypeQuality
all individuals: 1959
bin: 1.75e1
variant carriers: 57

GenotypeQuality
all individuals: 139
bin: 7.25e1
variant carriers: 62

GenotypeQuality
all individuals: 445
bin: 4.75e1
variant carriers: 46

GenotypeQuality
all individuals: 103
bin: 8.25e1
variant carriers: 91

GenotypeQuality
all individuals: 146
bin: 8.75e1
variant carriers: 145

GenotypeQuality
all individuals: 161
bin: 5.75e1
variant carriers: 71

GenotypeQuality
all individuals: 2527
bin: 2.75e1
variant carriers: 46

GenotypeQuality
all individuals: 663
bin: 6.75e1
variant carriers: 57

GenotypeQuality
all individuals: 3770
bin: 9.75e1
variant carriers: 3769

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3036
allele frequency: 1.019476158495635e-1
allele num: 29780
num of homozygotes: 85

Latino
type: Population
allele count: 208
allele frequency: 4.476969436074042e-2
allele num: 4646
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 232
allele frequency: 1.213389121338912e-1
allele num: 1912
num of homozygotes: 5

African
type: Population
allele count: 221
allele frequency: 6.088154269972452e-2
allele num: 3630
num of homozygotes: 2

South Asian
type: Population
allele count: 253
allele frequency: 2.29749364329822e-2
allele num: 11012
num of homozygotes: 4

Other
type: Population
allele count: 37
allele frequency: 8.447488584474885e-2
allele num: 438
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.95281e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

FS
type: SiteQuality
SIO_000300: 5.49e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.15e-1

QD
type: SiteQuality
SIO_000300: 1.428e1

VQSLOD
type: SiteQuality
SIO_000300: 3.89e0

MQRankSum
type: SiteQuality
SIO_000300: 7.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.95e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 707
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 536
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2002
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7305
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2332
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32923
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7905
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 390
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variant carriers: 0

GenotypeQuality
all individuals: 317
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variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26736
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3452
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4238
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1690
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3388
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.333582228859437e-5
allele num: 10714
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.11e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.17e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.69e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.275e0

FS
type: SiteQuality
SIO_000300: 2.813e0

QD
type: SiteQuality
SIO_000300: 1.418e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.42e-1

DP
type: SiteQuality
SIO_000300: 6.52012e5

GenotypeQuality
all individuals: 1486
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1022
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variant carriers: 0

GenotypeQuality
all individuals: 2332
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 536
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 317
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7305
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7905
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2002
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32923
bin: 2.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 400
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.333582228859437e-5
allele num: 10714
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4238
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26736
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3388
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3452
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1690
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.52012e5

FS
type: SiteQuality
SIO_000300: 2.813e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.69e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.11e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.17e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.275e0

QD
type: SiteQuality
SIO_000300: 1.418e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.42e-1

GenotypeQuality
all individuals: 32763
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 318
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1524
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7372
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1019
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2306
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1634
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4162
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3342
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3400
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.384384384384384e-5
allele num: 10656
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26330
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.7e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.98e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 6.48773e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.87e-2

FS
type: SiteQuality
SIO_000300: 1.654e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.15e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.54e-1

QD
type: SiteQuality
SIO_000300: 1.175e1

GenotypeQuality
all individuals: 504
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2310
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 945
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2534
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 33215
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 103
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7624
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10518
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 380
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3236
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3296
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4042
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.891050583657588e-5
allele num: 25700
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.81e-1

QD
type: SiteQuality
SIO_000300: 1.083e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.68e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 6.94e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.17e-1

FS
type: SiteQuality
SIO_000300: 1.072e0

VQSLOD
type: SiteQuality
SIO_000300: -1.289e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.52e0

DP
type: SiteQuality
SIO_000300: 6.43032e5

MQ
type: SiteQuality
SIO_000300: 5.906e1

GenotypeQuality
all individuals: 2534
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 708
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2238
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 504
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7624
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 945
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 8.25e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10518
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3296
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1650
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 3.090234857849196e-4
allele num: 3236
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 380
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4042
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 25700
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.94e-1

FS
type: SiteQuality
SIO_000300: 1.072e0

DP
type: SiteQuality
SIO_000300: 6.43032e5

VQSLOD
type: SiteQuality
SIO_000300: -1.289e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.68e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.17e-1

MQ
type: SiteQuality
SIO_000300: 5.906e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.81e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.52e0

QD
type: SiteQuality
SIO_000300: 1.083e1

GenotypeQuality
all individuals: 705
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1993
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 246
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2600
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 33383
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 527
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7288
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 8024
bin: 7.5e0
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3054
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3768
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 2.074516637623434e-4
allele num: 24102
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 362
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1522
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3098
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10252
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.91e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.7e-2

DP
type: SiteQuality
SIO_000300: 6.2917e5

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.93e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.43e0

QD
type: SiteQuality
SIO_000300: 1.294e1

GenotypeQuality
all individuals: 32002
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 824
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1854
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1153
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 699
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 414
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2666
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1036
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2308
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 292
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.438329345225147e-5
allele num: 18388
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2504
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9434
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.71e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.41e-1

DP
type: SiteQuality
SIO_000300: 5.72591e5

FS
type: SiteQuality
SIO_000300: 3.982e0

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.23e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.03e-1

QD
type: SiteQuality
SIO_000300: 1.28e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 60
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29446
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1172
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 817
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15305
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1845
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 685
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 108
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 264
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8850
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.272264631043257e-3
allele num: 786
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1838
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2104
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14652
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

MQRankSum
type: SiteQuality
SIO_000300: -4.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.66e-1

DP
type: SiteQuality
SIO_000300: 5.33313e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.23e-2

QD
type: SiteQuality
SIO_000300: 1.101e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.07e0

VQSLOD
type: SiteQuality
SIO_000300: 8.599999999999999e-2