6-32549579-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549579
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549578
    reference: chr 6
allele count: 6506
allele frequency: 5.554891480678267e-2
allele num: 117122
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.406delC
  hgvsp: ENSP00000353099.5:p.Gln136SerfsTer13
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3826
  bin: 7.75e1
  variant carriers: 441
genotype depth: GenotypeDepth
  all individuals: 2439
  bin: 4.75e1
  variant carriers: 101
genotype depth: GenotypeDepth
  all individuals: 3882
  bin: 7.25e1
  variant carriers: 333
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3119
  bin: 9.25e1
  variant carriers: 461
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 4.25e1
  variant carriers: 69
genotype depth: GenotypeDepth
  all individuals: 2970
  bin: 5.25e1
  variant carriers: 121
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 8.75e1
  variant carriers: 457
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3957
  bin: 6.75e1
  variant carriers: 313
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 2.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19672
  bin: 9.75e1
  variant carriers: 4066
genotype depth: GenotypeDepth
  all individuals: 3383
  bin: 5.75e1
  variant carriers: 172
genotype depth: GenotypeDepth
  all individuals: 3650
  bin: 6.25e1
  variant carriers: 253
genotype depth: GenotypeDepth
  all individuals: 3582
  bin: 8.25e1
  variant carriers: 435
genotype depth: GenotypeDepth
  all individuals: 1419
  bin: 3.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 1560
  bin: 3.75e1
  variant carriers: 39
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 7.5e0
  variant carriers: 211
genotype quality: GenotypeQuality
  all individuals: 621
  bin: 2.25e1
  variant carriers: 173
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 5.75e1
  variant carriers: 173
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 5.25e1
  variant carriers: 167
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 3.25e1
  variant carriers: 173
genotype quality: GenotypeQuality
  all individuals: 552
  bin: 2.75e1
  variant carriers: 214
genotype quality: GenotypeQuality
  all individuals: 1338
  bin: 8.75e1
  variant carriers: 135
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 4.75e1
  variant carriers: 181
genotype quality: GenotypeQuality
  all individuals: 1824
  bin: 8.25e1
  variant carriers: 144
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 1.25e1
  variant carriers: 237
genotype quality: GenotypeQuality
  all individuals: 3125
  bin: 6.25e1
  variant carriers: 170
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 4.25e1
  variant carriers: 200
genotype quality: GenotypeQuality
  all individuals: 1736
  bin: 7.75e1
  variant carriers: 118
genotype quality: GenotypeQuality
  all individuals: 641
  bin: 2.5e0
  variant carriers: 191
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 1.75e1
  variant carriers: 166
genotype quality: GenotypeQuality
  all individuals: 1953
  bin: 6.75e1
  variant carriers: 162
genotype quality: GenotypeQuality
  all individuals: 1252
  bin: 7.25e1
  variant carriers: 156
genotype quality: GenotypeQuality
  all individuals: 488
  bin: 3.75e1
  variant carriers: 194
genotype quality: GenotypeQuality
  all individuals: 2015
  bin: 9.25e1
  variant carriers: 127
genotype quality: GenotypeQuality
  all individuals: 41401
  bin: 9.75e1
  variant carriers: 4019
hgvs: p.Gln136SerfsTer13
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 285
  allele frequency: 4.482541679773513e-2
  allele num: 6358
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 373
  allele frequency: 4.424673784104389e-2
  allele num: 8430
  num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: TG
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum

6-32549581-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549581
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549581
    reference: chr 6
allele count: 3011
allele frequency: 2.76639532533397e-2
allele num: 108842
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.405C>T
  hgvsp: ENST00000360004.5:c.405C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1535
  bin: 3.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3714
  bin: 6.25e1
  variant carriers: 95
genotype depth: GenotypeDepth
  all individuals: 19501
  bin: 9.75e1
  variant carriers: 2094
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 4.75e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3447
  bin: 8.75e1
  variant carriers: 152
genotype depth: GenotypeDepth
  all individuals: 3092
  bin: 9.25e1
  variant carriers: 162
genotype depth: GenotypeDepth
  all individuals: 3919
  bin: 6.75e1
  variant carriers: 106
genotype depth: GenotypeDepth
  all individuals: 3604
  bin: 8.25e1
  variant carriers: 146
genotype depth: GenotypeDepth
  all individuals: 1391
  bin: 3.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1919
  bin: 4.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 3843
  bin: 7.75e1
  variant carriers: 154
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 2.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 2992
  bin: 5.25e1
  variant carriers: 61
genotype depth: GenotypeDepth
  all individuals: 3962
  bin: 7.25e1
  variant carriers: 135
genotype depth: GenotypeDepth
  all individuals: 3378
  bin: 5.75e1
  variant carriers: 64
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 7.5e0
  variant carriers: 64
genotype quality: GenotypeQuality
  all individuals: 37659
  bin: 9.75e1
  variant carriers: 2110
genotype quality: GenotypeQuality
  all individuals: 573
  bin: 2.25e1
  variant carriers: 66
genotype quality: GenotypeQuality
  all individuals: 1966
  bin: 6.75e1
  variant carriers: 54
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 1.25e1
  variant carriers: 79
genotype quality: GenotypeQuality
  all individuals: 420
  bin: 5.25e1
  variant carriers: 78
genotype quality: GenotypeQuality
  all individuals: 1805
  bin: 7.75e1
  variant carriers: 42
genotype quality: GenotypeQuality
  all individuals: 5133
  bin: 2.5e0
  variant carriers: 64
genotype quality: GenotypeQuality
  all individuals: 3082
  bin: 6.25e1
  variant carriers: 56
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 1.75e1
  variant carriers: 68
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 4.75e1
  variant carriers: 53
genotype quality: GenotypeQuality
  all individuals: 431
  bin: 4.25e1
  variant carriers: 83
genotype quality: GenotypeQuality
  all individuals: 445
  bin: 2.75e1
  variant carriers: 62
genotype quality: GenotypeQuality
  all individuals: 1996
  bin: 9.25e1
  variant carriers: 62
genotype quality: GenotypeQuality
  all individuals: 1814
  bin: 8.25e1
  variant carriers: 60
genotype quality: GenotypeQuality
  all individuals: 437
  bin: 3.25e1
  variant carriers: 67
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 3.75e1
  variant carriers: 68
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 5.75e1
  variant carriers: 55
genotype quality: GenotypeQuality
  all individuals: 1228
  bin: 7.25e1
  variant carriers: 37
genotype quality: GenotypeQuality
  all individuals: 1386
  bin: 8.75e1
  variant carriers: 59
hgvs: p.Thr135Thr
num of homozygotes: 0
population: African
  type: Population
  allele count: 287
  allele frequency: 3.146929824561404e-2
  allele num: 9120
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1630
  allele frequency: 2.719204590951555e-2
  allele num: 59944
  num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum

6-32549584-C-CT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549584
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549585
    reference: chr 6
allele count: 6504
allele frequency: 5.608540434265216e-2
allele num: 115966
alternate allele: CT
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.401dupA
  hgvsp: ENSP00000353099.5:p.Thr135AspfsTer23
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3428
  bin: 8.75e1
  variant carriers: 479
genotype depth: GenotypeDepth
  all individuals: 4185
  bin: 7.25e1
  variant carriers: 418
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 3.75e1
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1406
  bin: 3.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3179
  bin: 5.25e1
  variant carriers: 156
genotype depth: GenotypeDepth
  all individuals: 4234
  bin: 6.75e1
  variant carriers: 351
genotype depth: GenotypeDepth
  all individuals: 17387
  bin: 9.75e1
  variant carriers: 3673
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3774
  bin: 8.25e1
  variant carriers: 472
genotype depth: GenotypeDepth
  all individuals: 4068
  bin: 7.75e1
  variant carriers: 443
genotype depth: GenotypeDepth
  all individuals: 3106
  bin: 9.25e1
  variant carriers: 463
genotype depth: GenotypeDepth
  all individuals: 3638
  bin: 5.75e1
  variant carriers: 191
genotype depth: GenotypeDepth
  all individuals: 2018
  bin: 4.25e1
  variant carriers: 88
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2601
  bin: 4.75e1
  variant carriers: 124
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 2.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 4041
  bin: 6.25e1
  variant carriers: 320
genotype quality: GenotypeQuality
  all individuals: 40115
  bin: 9.75e1
  variant carriers: 4003
genotype quality: GenotypeQuality
  all individuals: 1317
  bin: 7.25e1
  variant carriers: 154
genotype quality: GenotypeQuality
  all individuals: 538
  bin: 7.5e0
  variant carriers: 209
genotype quality: GenotypeQuality
  all individuals: 2109
  bin: 9.25e1
  variant carriers: 141
genotype quality: GenotypeQuality
  all individuals: 1848
  bin: 8.25e1
  variant carriers: 140
genotype quality: GenotypeQuality
  all individuals: 1100
  bin: 2.5e0
  variant carriers: 178
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 4.25e1
  variant carriers: 193
genotype quality: GenotypeQuality
  all individuals: 599
  bin: 2.75e1
  variant carriers: 218
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 3.25e1
  variant carriers: 168
genotype quality: GenotypeQuality
  all individuals: 1382
  bin: 8.75e1
  variant carriers: 141
genotype quality: GenotypeQuality
  all individuals: 3069
  bin: 6.25e1
  variant carriers: 161
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 1.25e1
  variant carriers: 230
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 5.25e1
  variant carriers: 164
genotype quality: GenotypeQuality
  all individuals: 1775
  bin: 7.75e1
  variant carriers: 125
genotype quality: GenotypeQuality
  all individuals: 643
  bin: 2.25e1
  variant carriers: 165
genotype quality: GenotypeQuality
  all individuals: 508
  bin: 5.75e1
  variant carriers: 182
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 1.75e1
  variant carriers: 163
genotype quality: GenotypeQuality
  all individuals: 584
  bin: 4.75e1
  variant carriers: 188
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 3.75e1
  variant carriers: 206
genotype quality: GenotypeQuality
  all individuals: 1963
  bin: 6.75e1
  variant carriers: 155
hgvs: p.Thr135AspfsTer23
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 789
  allele frequency: 7.269209508015478e-2
  allele num: 10854
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 289
  allele frequency: 4.596055979643766e-2
  allele num: 6288
  num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD

6-32549584-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549584
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549584
    reference: chr 6
allele count: 1
allele frequency: 8.623217149854268e-6
allele num: 115966
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.402G>A
  hgvsp: ENST00000360004.5:c.402G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4185
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3774
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2601
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4234
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1406
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4041
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3638
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3179
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2018
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3428
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4068
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17387
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 584
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1317
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1963
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 508
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1848
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 599
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 643
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 538
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1100
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1382
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40115
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1775
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3069
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2109
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Lys134Lys
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 15900
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9768
  num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

6-32549587-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549587
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549587
    reference: chr 6
allele count: 2921
allele frequency: 2.464188698982605e-2
allele num: 118538
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.399A>C
  hgvsp: ENST00000360004.5:c.399A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15802
  bin: 9.75e1
  variant carriers: 1429
genotype depth: GenotypeDepth
  all individuals: 3356
  bin: 8.75e1
  variant carriers: 198
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 2.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 4422
  bin: 7.25e1
  variant carriers: 178
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 3.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2704
  bin: 4.75e1
  variant carriers: 62
genotype depth: GenotypeDepth
  all individuals: 3002
  bin: 9.25e1
  variant carriers: 201
genotype depth: GenotypeDepth
  all individuals: 3837
  bin: 8.25e1
  variant carriers: 206
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 3.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 4317
  bin: 6.25e1
  variant carriers: 179
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3391
  bin: 5.25e1
  variant carriers: 97
genotype depth: GenotypeDepth
  all individuals: 2111
  bin: 4.25e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 3930
  bin: 5.75e1
  variant carriers: 112
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 2.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 4116
  bin: 7.75e1
  variant carriers: 195
genotype depth: GenotypeDepth
  all individuals: 4480
  bin: 6.75e1
  variant carriers: 165
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 1.75e1
  variant carriers: 64
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 3.25e1
  variant carriers: 72
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 7.5e0
  variant carriers: 56
genotype quality: GenotypeQuality
  all individuals: 702
  bin: 2.5e0
  variant carriers: 51
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 1.25e1
  variant carriers: 70
genotype quality: GenotypeQuality
  all individuals: 45039
  bin: 9.75e1
  variant carriers: 2092
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 4.75e1
  variant carriers: 61
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 4.25e1
  variant carriers: 69
genotype quality: GenotypeQuality
  all individuals: 1628
  bin: 7.75e1
  variant carriers: 50
genotype quality: GenotypeQuality
  all individuals: 2017
  bin: 9.25e1
  variant carriers: 55
genotype quality: GenotypeQuality
  all individuals: 1690
  bin: 6.75e1
  variant carriers: 47
genotype quality: GenotypeQuality
  all individuals: 1046
  bin: 7.25e1
  variant carriers: 38
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 5.75e1
  variant carriers: 45
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 5.25e1
  variant carriers: 67
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 2.25e1
  variant carriers: 53
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 3.75e1
  variant carriers: 58
genotype quality: GenotypeQuality
  all individuals: 1743
  bin: 8.25e1
  variant carriers: 63
genotype quality: GenotypeQuality
  all individuals: 2526
  bin: 6.25e1
  variant carriers: 45
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 2.75e1
  variant carriers: 46
genotype quality: GenotypeQuality
  all individuals: 1214
  bin: 8.75e1
  variant carriers: 62
hgvs: p.Ser133Ser
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 243
  allele frequency: 2.918568340139322e-2
  allele num: 8326
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1591
  allele frequency: 2.433242590156914e-2
  allele num: 65386
  num of homozygotes: 0
population: African
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ

http://identifiers.org/exac.variant/6-32549589-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549589
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549589
    reference: chr 6
allele count: 30095
allele frequency: 2.804648475359726e-1
allele num: 107304
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.397T>G
  hgvsp: ENSP00000353099.5:p.Ser133Ala
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: missense
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 1.75e1
  variant carriers: 79
genotype depth: GenotypeDepth
  all individuals: 3650
  bin: 4.75e1
  variant carriers: 1816
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.5e0
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 4838
  bin: 5.75e1
  variant carriers: 2583
genotype depth: GenotypeDepth
  all individuals: 2906
  bin: 8.75e1
  variant carriers: 1633
genotype depth: GenotypeDepth
  all individuals: 3929
  bin: 7.75e1
  variant carriers: 2164
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1263
  bin: 2.75e1
  variant carriers: 254
genotype depth: GenotypeDepth
  all individuals: 4829
  bin: 6.75e1
  variant carriers: 2565
genotype depth: GenotypeDepth
  all individuals: 5017
  bin: 6.25e1
  variant carriers: 2675
genotype depth: GenotypeDepth
  all individuals: 4458
  bin: 7.25e1
  variant carriers: 2477
genotype depth: GenotypeDepth
  all individuals: 2520
  bin: 9.25e1
  variant carriers: 1425
genotype depth: GenotypeDepth
  all individuals: 4488
  bin: 5.25e1
  variant carriers: 2341
genotype depth: GenotypeDepth
  all individuals: 2883
  bin: 4.25e1
  variant carriers: 1284
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.25e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 1733
  bin: 3.25e1
  variant carriers: 489
genotype depth: GenotypeDepth
  all individuals: 11368
  bin: 9.75e1
  variant carriers: 6402
genotype depth: GenotypeDepth
  all individuals: 2130
  bin: 3.75e1
  variant carriers: 779
genotype depth: GenotypeDepth
  all individuals: 3502
  bin: 8.25e1
  variant carriers: 1929
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 2.25e1
  variant carriers: 131
genotype quality: GenotypeQuality
  all individuals: 687
  bin: 2.25e1
  variant carriers: 282
genotype quality: GenotypeQuality
  all individuals: 658
  bin: 3.75e1
  variant carriers: 270
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 5.75e1
  variant carriers: 294
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 7.5e0
  variant carriers: 263
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 4.25e1
  variant carriers: 300
genotype quality: GenotypeQuality
  all individuals: 593
  bin: 1.25e1
  variant carriers: 264
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 4.75e1
  variant carriers: 309
genotype quality: GenotypeQuality
  all individuals: 1185
  bin: 9.25e1
  variant carriers: 334
genotype quality: GenotypeQuality
  all individuals: 1153
  bin: 7.75e1
  variant carriers: 304
genotype quality: GenotypeQuality
  all individuals: 39984
  bin: 9.75e1
  variant carriers: 25637
genotype quality: GenotypeQuality
  all individuals: 5149
  bin: 2.5e0
  variant carriers: 175
genotype quality: GenotypeQuality
  all individuals: 594
  bin: 1.75e1
  variant carriers: 292
genotype quality: GenotypeQuality
  all individuals: 641
  bin: 3.25e1
  variant carriers: 274
genotype quality: GenotypeQuality
  all individuals: 595
  bin: 2.75e1
  variant carriers: 277
genotype quality: GenotypeQuality
  all individuals: 1316
  bin: 6.75e1
  variant carriers: 304
genotype quality: GenotypeQuality
  all individuals: 1158
  bin: 8.25e1
  variant carriers: 323
genotype quality: GenotypeQuality
  all individuals: 2263
  bin: 6.25e1
  variant carriers: 305
genotype quality: GenotypeQuality
  all individuals: 859
  bin: 8.75e1
  variant carriers: 324
genotype quality: GenotypeQuality
  all individuals: 566
  bin: 5.25e1
  variant carriers: 298
genotype quality: GenotypeQuality
  all individuals: 868
  bin: 7.25e1
  variant carriers: 298
hgvs: p.Ser133Ala
num of homozygotes: 2
population: African
  type: Population
  allele count: 2977
  allele frequency: 3.379114642451759e-1
  allele num: 8810
  num of homozygotes: 1
population: South Asian
  type: Population
  allele count: 5055
  allele frequency: 3.306514913657771e-1
  allele num: 15288
  num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: East Asian
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

6-32549596-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549596
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549596
    reference: chr 6
allele count: 1
allele frequency: 8.291598951941893e-6
allele num: 120604
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.390A>T
  hgvsp: ENST00000360004.5:c.390A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3566
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5511
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4402
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2433
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3025
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4784
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1989
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2137
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4994
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2978
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5446
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3945
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5668
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6479
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1021
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56613
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 431
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Val130Val
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9896
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 16494
  num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

6-32549596-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549596
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549596
    reference: chr 6
allele count: 101505
allele frequency: 8.416387516168617e-1
allele num: 120604
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.390A>G
  hgvsp: ENST00000360004.5:c.390A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 1.25e1
  variant carriers: 187
genotype depth: GenotypeDepth
  all individuals: 2137
  bin: 2.75e1
  variant carriers: 1491
genotype depth: GenotypeDepth
  all individuals: 4402
  bin: 6.75e1
  variant carriers: 4394
genotype depth: GenotypeDepth
  all individuals: 2433
  bin: 8.25e1
  variant carriers: 2428
genotype depth: GenotypeDepth
  all individuals: 3566
  bin: 7.25e1
  variant carriers: 3558
genotype depth: GenotypeDepth
  all individuals: 6479
  bin: 9.75e1
  variant carriers: 6458
genotype depth: GenotypeDepth
  all individuals: 5668
  bin: 5.25e1
  variant carriers: 5648
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 1.75e1
  variant carriers: 372
genotype depth: GenotypeDepth
  all individuals: 1989
  bin: 8.75e1
  variant carriers: 1987
genotype depth: GenotypeDepth
  all individuals: 3025
  bin: 3.25e1
  variant carriers: 2607
genotype depth: GenotypeDepth
  all individuals: 3945
  bin: 3.75e1
  variant carriers: 3815
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 2.25e1
  variant carriers: 782
genotype depth: GenotypeDepth
  all individuals: 4784
  bin: 6.25e1
  variant carriers: 4773
genotype depth: GenotypeDepth
  all individuals: 5511
  bin: 4.75e1
  variant carriers: 5463
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 4994
  bin: 4.25e1
  variant carriers: 4919
genotype depth: GenotypeDepth
  all individuals: 2978
  bin: 7.75e1
  variant carriers: 2973
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 9.25e1
  variant carriers: 1527
genotype depth: GenotypeDepth
  all individuals: 5446
  bin: 5.75e1
  variant carriers: 5422
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.5e0
  variant carriers: 171
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 4.75e1
  variant carriers: 88
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 1.75e1
  variant carriers: 74
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.75e1
  variant carriers: 53
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 2.25e1
  variant carriers: 73
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 5.75e1
  variant carriers: 96
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 3.25e1
  variant carriers: 78
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 5.25e1
  variant carriers: 111
genotype quality: GenotypeQuality
  all individuals: 1021
  bin: 6.25e1
  variant carriers: 152
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 3.75e1
  variant carriers: 93
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 8.75e1
  variant carriers: 240
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 7.5e0
  variant carriers: 43
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.25e1
  variant carriers: 33
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.25e1
  variant carriers: 70
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 7.75e1
  variant carriers: 264
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 8.25e1
  variant carriers: 305
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.5e0
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 7.25e1
  variant carriers: 155
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 9.25e1
  variant carriers: 406
genotype quality: GenotypeQuality
  all individuals: 431
  bin: 6.75e1
  variant carriers: 185
genotype quality: GenotypeQuality
  all individuals: 56613
  bin: 9.75e1
  variant carriers: 56474
hgvs: p.Val130Val
num of homozygotes: 42803
population: European (Non-Finnish)
  type: Population
  allele count: 56169
  allele frequency: 8.442149878257733e-1
  allele num: 66534
  num of homozygotes: 23731
population: East Asian
  type: Population
  allele count: 7316
  allele frequency: 8.467592592592592e-1
  allele num: 8640
  num of homozygotes: 3093
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

6-32549598-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549598
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549598
    reference: chr 6
allele count: 1
allele frequency: 8.309788931361144e-6
allele num: 120340
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.388G>C
  hgvsp: ENSP00000353099.5:p.Val130Leu
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5300
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3885
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8520
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9382
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2659
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2806
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2871
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2278
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5490
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7664
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 965
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4159
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3000
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1290
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1015
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3933
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2075
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9109
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2844
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11373
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 19950
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Val130Leu
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 66414
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 11556
  num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

6-32549602-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549602
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549602
    reference: chr 6
allele count: 1
allele frequency: 8.387150884844418e-6
allele num: 119230
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.384G>A
  hgvsp: ENST00000360004.5:c.384G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3766
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4955
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6603
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5035
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7599
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5773
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2028
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7041
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4383
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2590
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2765
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1984
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3750
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5645
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1962
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2958
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2063
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1733
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11336
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 520
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 519
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2907
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2517
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7276
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14987
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1278
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Val128Val
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9618
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6550
  num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

6-32549604-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549604
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549604
    reference: chr 6
allele count: 3
allele frequency: 2.533227500717748e-5
allele num: 118426
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.382G>A
  hgvsp: ENSP00000353099.5:p.Val128Met
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4820
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4684
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2020
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6169
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6913
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5882
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6127
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1983
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3694
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2609
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2741
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6675
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 11551
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2784
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1278
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2260
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3810
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1258
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5754
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11351
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1028
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2065
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3720
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 817
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2969
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6514
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2443
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Val128Met
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 2
  allele frequency: 3.051850947599719e-5
  allele num: 65534
  num of homozygotes: 0
population: African
  type: Population
  allele count: 1
  allele frequency: 1.049979000419992e-4
  allele num: 9524
  num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

http://identifiers.org/exac.variant/6-32549605-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549605
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549605
    reference: chr 6
allele count: 1
allele frequency: 8.52980313214371e-6
allele num: 117236
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.381G>T
  hgvsp: ENSP00000353099.5:p.Lys127Asn
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6256
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6564
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5953
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2623
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4728
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6615
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4718
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2010
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3619
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6388
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1983
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1077
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3664
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2361
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3315
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1344
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2948
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2340
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5463
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2059
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2010
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4150
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 981
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9324
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11331
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5838
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1272
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Lys127Asn
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6492
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9382
  num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: FS

6-32549607-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549607
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549607
    reference: chr 6
allele count: 2102
allele frequency: 2.016268273030733e-2
allele num: 104252
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.379A>G
  hgvsp: ENSP00000353099.5:p.Lys127Glu
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 9.75e1
  variant carriers: 228
genotype depth: GenotypeDepth
  all individuals: 7430
  bin: 3.25e1
  variant carriers: 151
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 8.25e1
  variant carriers: 80
genotype depth: GenotypeDepth
  all individuals: 6760
  bin: 3.75e1
  variant carriers: 188
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 8.75e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 7002
  bin: 2.75e1
  variant carriers: 79
genotype depth: GenotypeDepth
  all individuals: 4898
  bin: 4.75e1
  variant carriers: 196
genotype depth: GenotypeDepth
  all individuals: 2386
  bin: 6.25e1
  variant carriers: 159
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 9.25e1
  variant carriers: 65
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3117
  bin: 5.75e1
  variant carriers: 167
genotype depth: GenotypeDepth
  all individuals: 1385
  bin: 7.25e1
  variant carriers: 114
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5136
  bin: 2.25e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 7.75e1
  variant carriers: 105
genotype depth: GenotypeDepth
  all individuals: 3260
  bin: 1.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 6135
  bin: 4.25e1
  variant carriers: 235
genotype depth: GenotypeDepth
  all individuals: 3986
  bin: 5.25e1
  variant carriers: 201
genotype depth: GenotypeDepth
  all individuals: 1880
  bin: 6.75e1
  variant carriers: 148
genotype quality: GenotypeQuality
  all individuals: 1538
  bin: 7.5e0
  variant carriers: 43
genotype quality: GenotypeQuality
  all individuals: 1068
  bin: 5.75e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 1684
  bin: 2.75e1
  variant carriers: 33
genotype quality: GenotypeQuality
  all individuals: 21738
  bin: 9.75e1
  variant carriers: 1606
genotype quality: GenotypeQuality
  all individuals: 2718
  bin: 3.25e1
  variant carriers: 35
genotype quality: GenotypeQuality
  all individuals: 1913
  bin: 1.75e1
  variant carriers: 44
genotype quality: GenotypeQuality
  all individuals: 3985
  bin: 6.25e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 2405
  bin: 4.75e1
  variant carriers: 34
genotype quality: GenotypeQuality
  all individuals: 2753
  bin: 3.75e1
  variant carriers: 41
genotype quality: GenotypeQuality
  all individuals: 2301
  bin: 6.75e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 2088
  bin: 5.25e1
  variant carriers: 34
genotype quality: GenotypeQuality
  all individuals: 846
  bin: 8.75e1
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 1781
  bin: 7.75e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 3116
  bin: 2.25e1
  variant carriers: 39
genotype quality: GenotypeQuality
  all individuals: 3612
  bin: 2.5e0
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 1188
  bin: 1.25e1
  variant carriers: 50
genotype quality: GenotypeQuality
  all individuals: 1203
  bin: 7.25e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 1322
  bin: 9.25e1
  variant carriers: 36
genotype quality: GenotypeQuality
  all individuals: 1653
  bin: 4.25e1
  variant carriers: 50
genotype quality: GenotypeQuality
  all individuals: 1554
  bin: 8.25e1
  variant carriers: 40
hgvs: p.Lys127Glu
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1229
  allele frequency: 2.113935807905329e-2
  allele num: 58138
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 116
  allele frequency: 1.176470588235294e-2
  allele num: 9860
  num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: African
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: DP

6-32549607-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549607
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549607
    reference: chr 6
allele count: 16388
allele frequency: 1.571960250163066e-1
allele num: 104252
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.379A>C
  hgvsp: ENSP00000353099.5:p.Lys127Gln
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 9.25e1
  variant carriers: 137
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 1.25e1
  variant carriers: 214
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 8.25e1
  variant carriers: 299
genotype depth: GenotypeDepth
  all individuals: 7430
  bin: 3.25e1
  variant carriers: 2128
genotype depth: GenotypeDepth
  all individuals: 5136
  bin: 2.25e1
  variant carriers: 1375
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 7.75e1
  variant carriers: 330
genotype depth: GenotypeDepth
  all individuals: 7002
  bin: 2.75e1
  variant carriers: 1937
genotype depth: GenotypeDepth
  all individuals: 6760
  bin: 3.75e1
  variant carriers: 2019
genotype depth: GenotypeDepth
  all individuals: 3260
  bin: 1.75e1
  variant carriers: 654
genotype depth: GenotypeDepth
  all individuals: 3986
  bin: 5.25e1
  variant carriers: 1200
genotype depth: GenotypeDepth
  all individuals: 2386
  bin: 6.25e1
  variant carriers: 746
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 9.75e1
  variant carriers: 496
genotype depth: GenotypeDepth
  all individuals: 3117
  bin: 5.75e1
  variant carriers: 922
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 2.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 7.5e0
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 4898
  bin: 4.75e1
  variant carriers: 1468
genotype depth: GenotypeDepth
  all individuals: 6135
  bin: 4.25e1
  variant carriers: 1818
genotype depth: GenotypeDepth
  all individuals: 1880
  bin: 6.75e1
  variant carriers: 579
genotype depth: GenotypeDepth
  all individuals: 1385
  bin: 7.25e1
  variant carriers: 466
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 8.75e1
  variant carriers: 187
genotype quality: GenotypeQuality
  all individuals: 1188
  bin: 1.25e1
  variant carriers: 164
genotype quality: GenotypeQuality
  all individuals: 1538
  bin: 7.5e0
  variant carriers: 173
genotype quality: GenotypeQuality
  all individuals: 3116
  bin: 2.25e1
  variant carriers: 177
genotype quality: GenotypeQuality
  all individuals: 2088
  bin: 5.25e1
  variant carriers: 149
genotype quality: GenotypeQuality
  all individuals: 2753
  bin: 3.75e1
  variant carriers: 162
genotype quality: GenotypeQuality
  all individuals: 1322
  bin: 9.25e1
  variant carriers: 156
genotype quality: GenotypeQuality
  all individuals: 3985
  bin: 6.25e1
  variant carriers: 160
genotype quality: GenotypeQuality
  all individuals: 1203
  bin: 7.25e1
  variant carriers: 159
genotype quality: GenotypeQuality
  all individuals: 1068
  bin: 5.75e1
  variant carriers: 177
genotype quality: GenotypeQuality
  all individuals: 1653
  bin: 4.25e1
  variant carriers: 177
genotype quality: GenotypeQuality
  all individuals: 1913
  bin: 1.75e1
  variant carriers: 140
genotype quality: GenotypeQuality
  all individuals: 1781
  bin: 7.75e1
  variant carriers: 137
genotype quality: GenotypeQuality
  all individuals: 846
  bin: 8.75e1
  variant carriers: 142
genotype quality: GenotypeQuality
  all individuals: 2718
  bin: 3.25e1
  variant carriers: 156
genotype quality: GenotypeQuality
  all individuals: 1684
  bin: 2.75e1
  variant carriers: 177
genotype quality: GenotypeQuality
  all individuals: 3612
  bin: 2.5e0
  variant carriers: 115
genotype quality: GenotypeQuality
  all individuals: 2405
  bin: 4.75e1
  variant carriers: 156
genotype quality: GenotypeQuality
  all individuals: 2301
  bin: 6.75e1
  variant carriers: 174
genotype quality: GenotypeQuality
  all individuals: 1554
  bin: 8.25e1
  variant carriers: 146
genotype quality: GenotypeQuality
  all individuals: 21738
  bin: 9.75e1
  variant carriers: 14020
hgvs: p.Lys127Gln
num of homozygotes: 1
population: Other
  type: Population
  allele count: 107
  allele frequency: 1.357868020304568e-1
  allele num: 788
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 1921
  allele frequency: 1.38580291444236e-1
  allele num: 13862
  num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: VQSLOD

http://identifiers.org/exac.variant/6-32549608-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549608
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549608
    reference: chr 6
allele count: 2
allele frequency: 1.879451951810852e-5
allele num: 106414
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.378T>G
  hgvsp: ENST00000360004.5:c.378T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1995
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3985
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7730
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6030
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7603
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2120
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5854
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2731
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3531
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4536
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6956
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1579
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2213
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3843
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1456
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2678
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8288
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1145
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1925
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4722
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4981
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5758
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1386
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1603
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1934
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3215
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2349
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3087
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5174
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3352
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 876
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Pro126Pro
num of homozygotes: 0
population: Other
  type: Population
  allele count: 1
  allele frequency: 1.2531328320802e-3
  allele num: 798
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 1
  allele frequency: 7.368110816386678e-5
  allele num: 13572
  num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

6-32549609-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549609
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549609
    reference: chr 6
allele count: 1
allele frequency: 9.436633009342266e-6
allele num: 105970
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.377C>G
  hgvsp: ENSP00000353099.5:p.Pro126Arg
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2105
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6957
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4535
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1121
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2007
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7611
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5856
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6030
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2716
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3528
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7728
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4012
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3562
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 482
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4730
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1384
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1893
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4997
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1603
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8286
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1936
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1460
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2215
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3089
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3275
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5545
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1256
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2671
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2347
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3844
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 877
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4978
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro126Arg
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 1.678415575696542e-5
  allele num: 59580
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 794
  num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

6-32549611-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549611
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549611
    reference: chr 6
allele count: 57307
allele frequency: 5.079237055288675e-1
allele num: 112826
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.375A>T
  hgvsp: ENSP00000353099.5:p.Gln125His
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6839
  bin: 3.75e1
  variant carriers: 5404
genotype depth: GenotypeDepth
  all individuals: 5588
  bin: 4.25e1
  variant carriers: 4486
genotype depth: GenotypeDepth
  all individuals: 7759
  bin: 3.25e1
  variant carriers: 5888
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 7.75e1
  variant carriers: 677
genotype depth: GenotypeDepth
  all individuals: 4234
  bin: 4.75e1
  variant carriers: 3470
genotype depth: GenotypeDepth
  all individuals: 3302
  bin: 5.25e1
  variant carriers: 2739
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 7.5e0
  variant carriers: 547
genotype depth: GenotypeDepth
  all individuals: 6403
  bin: 2.25e1
  variant carriers: 5167
genotype depth: GenotypeDepth
  all individuals: 2361
  bin: 1.25e1
  variant carriers: 1842
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 2.5e0
  variant carriers: 129
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 6.75e1
  variant carriers: 1209
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 6.25e1
  variant carriers: 1624
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 9.75e1
  variant carriers: 991
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 7.25e1
  variant carriers: 838
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 8.25e1
  variant carriers: 510
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 9.25e1
  variant carriers: 295
genotype depth: GenotypeDepth
  all individuals: 7875
  bin: 2.75e1
  variant carriers: 5942
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 8.75e1
  variant carriers: 379
genotype depth: GenotypeDepth
  all individuals: 2593
  bin: 5.75e1
  variant carriers: 2130
genotype depth: GenotypeDepth
  all individuals: 4588
  bin: 1.75e1
  variant carriers: 3738
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 3.25e1
  variant carriers: 251
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 5.25e1
  variant carriers: 264
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 3.75e1
  variant carriers: 257
genotype quality: GenotypeQuality
  all individuals: 47202
  bin: 9.75e1
  variant carriers: 42915
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 1.75e1
  variant carriers: 202
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 8.75e1
  variant carriers: 318
genotype quality: GenotypeQuality
  all individuals: 684
  bin: 7.75e1
  variant carriers: 351
genotype quality: GenotypeQuality
  all individuals: 512
  bin: 4.75e1
  variant carriers: 279
genotype quality: GenotypeQuality
  all individuals: 425
  bin: 2.75e1
  variant carriers: 200
genotype quality: GenotypeQuality
  all individuals: 2031
  bin: 6.25e1
  variant carriers: 335
genotype quality: GenotypeQuality
  all individuals: 675
  bin: 2.25e1
  variant carriers: 224
genotype quality: GenotypeQuality
  all individuals: 587
  bin: 7.25e1
  variant carriers: 313
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 1.25e1
  variant carriers: 189
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 7.5e0
  variant carriers: 179
genotype quality: GenotypeQuality
  all individuals: 2104
  bin: 2.5e0
  variant carriers: 133
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 5.75e1
  variant carriers: 291
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 4.25e1
  variant carriers: 222
genotype quality: GenotypeQuality
  all individuals: 634
  bin: 8.25e1
  variant carriers: 366
genotype quality: GenotypeQuality
  all individuals: 924
  bin: 6.75e1
  variant carriers: 312
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 9.25e1
  variant carriers: 404
hgvs: p.Gln125His
num of homozygotes: 10568
population: African
  type: Population
  allele count: 5397
  allele frequency: 5.787046965472872e-1
  allele num: 9326
  num of homozygotes: 1305
population: East Asian
  type: Population
  allele count: 4508
  allele frequency: 5.553091894555309e-1
  allele num: 8118
  num of homozygotes: 857
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: Latino
reference allele: T
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ClippingRankSum

6-32549611-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549611
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549611
    reference: chr 6
allele count: 8893
allele frequency: 7.882048464006523e-2
allele num: 112826
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.375A>G
  hgvsp: ENST00000360004.5:c.375A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 7.25e1
  variant carriers: 63
genotype depth: GenotypeDepth
  all individuals: 5588
  bin: 4.25e1
  variant carriers: 580
genotype depth: GenotypeDepth
  all individuals: 7759
  bin: 3.25e1
  variant carriers: 1002
genotype depth: GenotypeDepth
  all individuals: 3302
  bin: 5.25e1
  variant carriers: 272
genotype depth: GenotypeDepth
  all individuals: 7875
  bin: 2.75e1
  variant carriers: 1310
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 2.5e0
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 6403
  bin: 2.25e1
  variant carriers: 1406
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 7.5e0
  variant carriers: 230
genotype depth: GenotypeDepth
  all individuals: 2361
  bin: 1.25e1
  variant carriers: 742
genotype depth: GenotypeDepth
  all individuals: 4588
  bin: 1.75e1
  variant carriers: 1253
genotype depth: GenotypeDepth
  all individuals: 6839
  bin: 3.75e1
  variant carriers: 794
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 6.25e1
  variant carriers: 137
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 8.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 2593
  bin: 5.75e1
  variant carriers: 229
genotype depth: GenotypeDepth
  all individuals: 4234
  bin: 4.75e1
  variant carriers: 428
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 9.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 8.25e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 7.75e1
  variant carriers: 65
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 9.75e1
  variant carriers: 88
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 6.75e1
  variant carriers: 106
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 5.75e1
  variant carriers: 92
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 1.25e1
  variant carriers: 47
genotype quality: GenotypeQuality
  all individuals: 425
  bin: 2.75e1
  variant carriers: 59
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 1.75e1
  variant carriers: 51
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 8.75e1
  variant carriers: 67
genotype quality: GenotypeQuality
  all individuals: 47202
  bin: 9.75e1
  variant carriers: 7337
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 5.25e1
  variant carriers: 111
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 3.75e1
  variant carriers: 93
genotype quality: GenotypeQuality
  all individuals: 2031
  bin: 6.25e1
  variant carriers: 84
genotype quality: GenotypeQuality
  all individuals: 684
  bin: 7.75e1
  variant carriers: 87
genotype quality: GenotypeQuality
  all individuals: 675
  bin: 2.25e1
  variant carriers: 82
genotype quality: GenotypeQuality
  all individuals: 512
  bin: 4.75e1
  variant carriers: 113
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 7.5e0
  variant carriers: 52
genotype quality: GenotypeQuality
  all individuals: 2104
  bin: 2.5e0
  variant carriers: 37
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 9.25e1
  variant carriers: 110
genotype quality: GenotypeQuality
  all individuals: 587
  bin: 7.25e1
  variant carriers: 67
genotype quality: GenotypeQuality
  all individuals: 634
  bin: 8.25e1
  variant carriers: 73
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 4.25e1
  variant carriers: 83
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 3.25e1
  variant carriers: 94
genotype quality: GenotypeQuality
  all individuals: 924
  bin: 6.75e1
  variant carriers: 91
hgvs: p.Gln125Gln
num of homozygotes: 470
population: European (Non-Finnish)
  type: Population
  allele count: 6016
  allele frequency: 9.611144838163402e-2
  allele num: 62594
  num of homozygotes: 296
population: East Asian
  type: Population
  allele count: 156
  allele frequency: 1.921655580192166e-2
  allele num: 8118
  num of homozygotes: 5
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: African
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

6-32549612-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549612
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549612
    reference: chr 6
allele count: 1
allele frequency: 9.665944942777607e-6
allele num: 103456
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.374A>T
  hgvsp: ENSP00000353099.5:p.Gln125Leu
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8750
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3741
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9208
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3140
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4193
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2318
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8315
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6335
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6248
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1850
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 950
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9921
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 806
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6006
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3497
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 806
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1025
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3805
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3712
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1182
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16747
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1217
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 730
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1638
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 501
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4043
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Gln125Leu
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 5920
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 774
  num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
reference allele: T
site quality: MQ
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD

6-32549613-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549613
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549613
    reference: chr 6
allele count: 9672
allele frequency: 9.635577516985794e-2
allele num: 100378
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.373C>G
  hgvsp: ENSP00000353099.5:p.Gln125Glu
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 7.5e0
  variant carriers: 336
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 2.5e0
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 8394
  bin: 2.25e1
  variant carriers: 1603
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 8.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 6828
  bin: 1.75e1
  variant carriers: 1524
genotype depth: GenotypeDepth
  all individuals: 8721
  bin: 3.25e1
  variant carriers: 1061
genotype depth: GenotypeDepth
  all individuals: 9099
  bin: 2.75e1
  variant carriers: 1362
genotype depth: GenotypeDepth
  all individuals: 1646
  bin: 5.75e1
  variant carriers: 195
genotype depth: GenotypeDepth
  all individuals: 6219
  bin: 3.75e1
  variant carriers: 783
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 6.75e1
  variant carriers: 103
genotype depth: GenotypeDepth
  all individuals: 4094
  bin: 1.25e1
  variant carriers: 1052
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 7.75e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 9.75e1
  variant carriers: 68
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 9.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 4029
  bin: 4.25e1
  variant carriers: 613
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 6.25e1
  variant carriers: 109
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 7.25e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 4.75e1
  variant carriers: 386
genotype depth: GenotypeDepth
  all individuals: 2069
  bin: 5.25e1
  variant carriers: 268
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 2.5e0
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 8.75e1
  variant carriers: 84
genotype quality: GenotypeQuality
  all individuals: 896
  bin: 1.25e1
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 5.25e1
  variant carriers: 90
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 1.75e1
  variant carriers: 49
genotype quality: GenotypeQuality
  all individuals: 1399
  bin: 7.75e1
  variant carriers: 94
genotype quality: GenotypeQuality
  all individuals: 7390
  bin: 7.5e0
  variant carriers: 39
genotype quality: GenotypeQuality
  all individuals: 677
  bin: 9.25e1
  variant carriers: 102
genotype quality: GenotypeQuality
  all individuals: 1161
  bin: 3.75e1
  variant carriers: 83
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 4.75e1
  variant carriers: 103
genotype quality: GenotypeQuality
  all individuals: 984
  bin: 8.25e1
  variant carriers: 79
genotype quality: GenotypeQuality
  all individuals: 8041
  bin: 6.25e1
  variant carriers: 73
genotype quality: GenotypeQuality
  all individuals: 10912
  bin: 9.75e1
  variant carriers: 8387
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 4.25e1
  variant carriers: 76
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 5.75e1
  variant carriers: 75
genotype quality: GenotypeQuality
  all individuals: 14873
  bin: 2.25e1
  variant carriers: 63
genotype quality: GenotypeQuality
  all individuals: 1052
  bin: 7.25e1
  variant carriers: 73
genotype quality: GenotypeQuality
  all individuals: 2875
  bin: 3.25e1
  variant carriers: 81
genotype quality: GenotypeQuality
  all individuals: 3471
  bin: 2.75e1
  variant carriers: 41
genotype quality: GenotypeQuality
  all individuals: 3281
  bin: 6.75e1
  variant carriers: 84
hgvs: p.Gln125Glu
num of homozygotes: 432
population: African
  type: Population
  allele count: 623
  allele frequency: 7.906091370558375e-2
  allele num: 7880
  num of homozygotes: 20
population: East Asian
  type: Population
  allele count: 170
  allele frequency: 2.269692923898532e-2
  allele num: 7490
  num of homozygotes: 5
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

6-32549613-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549613
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549613
    reference: chr 6
allele count: 1
allele frequency: 9.962342345932375e-6
allele num: 100378
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.373C>A
  hgvsp: ENSP00000353099.5:p.Gln125Lys
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 4094
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9099
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8394
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4029
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8721
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6219
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1646
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6828
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2069
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1052
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7390
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2875
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14873
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1161
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1399
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3471
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3281
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8041
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 896
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10912
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 677
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 984
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gln125Lys
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 728
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7490
  num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: South Asian
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD

6-32549613-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549613
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549613
    reference: chr 6
allele count: 2
allele frequency: 1.992468469186475e-5
allele num: 100378
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: stop_gained
  consequence: splice_region_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.373C>T
  hgvsp: ENSP00000353099.5:p.Gln125Ter
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: stop gained
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 8721
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8394
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6828
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4029
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4094
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6219
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9099
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1646
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2069
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10912
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2875
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 896
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1052
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1161
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7390
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 677
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3281
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1399
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8041
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3471
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14873
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 984
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gln125Ter
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 728
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7880
  num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: DP

6-32549614-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549614
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549614
    reference: chr 6
allele count: 11756
allele frequency: 1.239195513766497e-1
allele num: 94868
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.372C>T
  hgvsp: ENST00000360004.5:c.372C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 7.75e1
  variant carriers: 62
genotype depth: GenotypeDepth
  all individuals: 8954
  bin: 2.75e1
  variant carriers: 1651
genotype depth: GenotypeDepth
  all individuals: 8468
  bin: 2.25e1
  variant carriers: 1816
genotype depth: GenotypeDepth
  all individuals: 3946
  bin: 4.25e1
  variant carriers: 713
genotype depth: GenotypeDepth
  all individuals: 1912
  bin: 5.25e1
  variant carriers: 369
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 7.25e1
  variant carriers: 93
genotype depth: GenotypeDepth
  all individuals: 4288
  bin: 1.25e1
  variant carriers: 1203
genotype depth: GenotypeDepth
  all individuals: 7288
  bin: 1.75e1
  variant carriers: 1746
genotype depth: GenotypeDepth
  all individuals: 6128
  bin: 3.75e1
  variant carriers: 990
genotype depth: GenotypeDepth
  all individuals: 2735
  bin: 4.75e1
  variant carriers: 516
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 2.5e0
  variant carriers: 62
genotype depth: GenotypeDepth
  all individuals: 1474
  bin: 5.75e1
  variant carriers: 245
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 9.75e1
  variant carriers: 104
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 8.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 6.25e1
  variant carriers: 171
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 6.75e1
  variant carriers: 128
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 9.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 1431
  bin: 7.5e0
  variant carriers: 401
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 8.25e1
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 8504
  bin: 3.25e1
  variant carriers: 1300
genotype quality: GenotypeQuality
  all individuals: 910
  bin: 8.25e1
  variant carriers: 91
genotype quality: GenotypeQuality
  all individuals: 6808
  bin: 6.25e1
  variant carriers: 86
genotype quality: GenotypeQuality
  all individuals: 9065
  bin: 7.5e0
  variant carriers: 41
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 5.75e1
  variant carriers: 83
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 8.75e1
  variant carriers: 94
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 4.75e1
  variant carriers: 115
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 5.25e1
  variant carriers: 99
genotype quality: GenotypeQuality
  all individuals: 970
  bin: 7.25e1
  variant carriers: 87
genotype quality: GenotypeQuality
  all individuals: 2994
  bin: 3.25e1
  variant carriers: 83
genotype quality: GenotypeQuality
  all individuals: 2838
  bin: 6.75e1
  variant carriers: 101
genotype quality: GenotypeQuality
  all individuals: 13098
  bin: 2.25e1
  variant carriers: 65
genotype quality: GenotypeQuality
  all individuals: 1241
  bin: 1.25e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 2.5e0
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 1220
  bin: 3.75e1
  variant carriers: 89
genotype quality: GenotypeQuality
  all individuals: 3373
  bin: 2.75e1
  variant carriers: 46
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 4.25e1
  variant carriers: 83
genotype quality: GenotypeQuality
  all individuals: 606
  bin: 9.25e1
  variant carriers: 110
genotype quality: GenotypeQuality
  all individuals: 12271
  bin: 9.75e1
  variant carriers: 10191
genotype quality: GenotypeQuality
  all individuals: 594
  bin: 1.75e1
  variant carriers: 50
genotype quality: GenotypeQuality
  all individuals: 1285
  bin: 7.75e1
  variant carriers: 114
hgvs: c.372C>T
num of homozygotes: 633
population: European (Non-Finnish)
  type: Population
  allele count: 7219
  allele frequency: 1.336901366717286e-1
  allele num: 53998
  num of homozygotes: 355
population: Other
  type: Population
  allele count: 94
  allele frequency: 1.366279069767442e-1
  allele num: 688
  num of homozygotes: 5
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQ

6-32549614-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549614
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549614
    reference: chr 6
allele count: 3
allele frequency: 3.162288653708311e-5
allele num: 94868
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.372C>A
  hgvsp: ENST00000360004.5:c.372C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1431
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8504
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7288
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3946
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1912
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4288
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2735
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8468
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6128
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1474
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8954
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2994
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 910
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 970
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 594
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1241
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1285
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6808
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9065
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1220
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12271
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 13098
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 606
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3373
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2838
  bin: 6.75e1
  variant carriers: 0
hgvs: c.372C>A
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8142
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7408
  num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: MQ

6-32549615-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549615
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549615
    reference: chr 6
allele count: 1
allele frequency: 1.267587780453796e-5
allele num: 78890
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371T>C
  hgvsp: ENSP00000353099.5:p.Val124Ala
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1576
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7499
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8383
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4832
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3692
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1933
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5427
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8519
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7677
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2540
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 737
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2276
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 964
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 429
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 784
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6715
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3297
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12699
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2579
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12823
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 693
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 628
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 916
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1298
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1215
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3463
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1958
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2711
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Val124Ala
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6376
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 602
  num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: African
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/6-32549616-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549616
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549616
    reference: chr 6
allele count: 2
allele frequency: 2.557086966527732e-5
allele num: 78214
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-1G>T
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1163
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8357
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2527
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1952
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5393
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4856
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7459
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7638
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8461
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3686
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1172
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3300
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 429
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12806
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 704
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 912
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2339
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 799
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6763
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2568
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1291
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3479
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 833
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1978
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12421
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 961
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2712
  bin: 9.75e1
  variant carriers: 2
hgvs: c.371-1G>T
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 5852
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 2.243560979987436e-5
  allele num: 44572
  num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD

6-32549616-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549616
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549616
    reference: chr 6
allele count: 3
allele frequency: 3.835630449791597e-5
allele num: 78214
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-1G>A
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5393
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1163
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1952
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7638
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7459
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4856
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8357
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8461
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2527
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3686
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1172
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 429
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2568
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2339
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2712
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 833
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6763
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12421
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1291
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 912
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 704
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1978
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12806
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3479
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3300
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 961
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 799
  bin: 4.75e1
  variant carriers: 0
hgvs: c.371-1G>A
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4572
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6318
  num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: DP
site quality: ClippingRankSum

6-32549617-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549617
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549617
    reference: chr 6
allele count: 1
allele frequency: 1.436699040285041e-5
allele num: 69604
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-2A>G
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1944
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4948
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3423
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7669
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7744
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1541
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6818
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6920
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2396
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4537
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2827
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1985
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 902
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1268
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1137
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 625
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3270
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 846
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11115
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2762
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1284
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 949
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 524
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9254
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5690
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 429
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2285
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2236
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2710
  bin: 9.75e1
  variant carriers: 1
hgvs: c.371-2A>G
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9546
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 5130
  num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: QD

6-32549619-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549619
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549619
    reference: chr 6
allele count: 2
allele frequency: 3.258708899534005e-5
allele num: 61374
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-4C>A
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4679
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4260
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6495
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3061
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7024
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6021
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2057
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7068
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2839
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3885
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4673
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2028
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7266
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3335
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2968
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6259
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2183
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1440
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1030
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2307
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 930
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 941
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 814
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1239
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2711
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 5.75e1
  variant carriers: 0
hgvs: c.371-4C>A
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4308
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4580
  num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

6-32549620-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549620
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549620
    reference: chr 6
allele count: 11535
allele frequency: 1.670818969263304e-1
allele num: 69038
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-5C>T
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 5.25e1
  variant carriers: 441
genotype depth: GenotypeDepth
  all individuals: 2332
  bin: 7.5e0
  variant carriers: 175
genotype depth: GenotypeDepth
  all individuals: 7585
  bin: 2.25e1
  variant carriers: 2003
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.75e1
  variant carriers: 67
genotype depth: GenotypeDepth
  all individuals: 5820
  bin: 3.25e1
  variant carriers: 1612
genotype depth: GenotypeDepth
  all individuals: 5342
  bin: 1.25e1
  variant carriers: 690
genotype depth: GenotypeDepth
  all individuals: 2882
  bin: 4.25e1
  variant carriers: 917
genotype depth: GenotypeDepth
  all individuals: 2005
  bin: 4.75e1
  variant carriers: 690
genotype depth: GenotypeDepth
  all individuals: 4108
  bin: 3.75e1
  variant carriers: 1216
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 2.5e0
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.75e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.25e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 7.25e1
  variant carriers: 129
genotype depth: GenotypeDepth
  all individuals: 7006
  bin: 2.75e1
  variant carriers: 2026
genotype depth: GenotypeDepth
  all individuals: 7109
  bin: 1.75e1
  variant carriers: 1538
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 5.75e1
  variant carriers: 313
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 6.75e1
  variant carriers: 163
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 9.75e1
  variant carriers: 88
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 6.25e1
  variant carriers: 244
genotype quality: GenotypeQuality
  all individuals: 1307
  bin: 4.75e1
  variant carriers: 194
genotype quality: GenotypeQuality
  all individuals: 912
  bin: 7.25e1
  variant carriers: 171
genotype quality: GenotypeQuality
  all individuals: 6206
  bin: 2.5e0
  variant carriers: 132
genotype quality: GenotypeQuality
  all individuals: 1415
  bin: 1.75e1
  variant carriers: 198
genotype quality: GenotypeQuality
  all individuals: 3655
  bin: 2.25e1
  variant carriers: 200
genotype quality: GenotypeQuality
  all individuals: 702
  bin: 9.25e1
  variant carriers: 171
genotype quality: GenotypeQuality
  all individuals: 1696
  bin: 3.75e1
  variant carriers: 203
genotype quality: GenotypeQuality
  all individuals: 4975
  bin: 7.5e0
  variant carriers: 219
genotype quality: GenotypeQuality
  all individuals: 1151
  bin: 7.75e1
  variant carriers: 168
genotype quality: GenotypeQuality
  all individuals: 1975
  bin: 3.25e1
  variant carriers: 200
genotype quality: GenotypeQuality
  all individuals: 1607
  bin: 1.25e1
  variant carriers: 172
genotype quality: GenotypeQuality
  all individuals: 1842
  bin: 6.75e1
  variant carriers: 205
genotype quality: GenotypeQuality
  all individuals: 856
  bin: 5.25e1
  variant carriers: 192
genotype quality: GenotypeQuality
  all individuals: 12220
  bin: 9.75e1
  variant carriers: 8941
genotype quality: GenotypeQuality
  all individuals: 4094
  bin: 6.25e1
  variant carriers: 190
genotype quality: GenotypeQuality
  all individuals: 973
  bin: 8.25e1
  variant carriers: 197
genotype quality: GenotypeQuality
  all individuals: 1021
  bin: 4.25e1
  variant carriers: 157
genotype quality: GenotypeQuality
  all individuals: 1536
  bin: 2.75e1
  variant carriers: 181
genotype quality: GenotypeQuality
  all individuals: 578
  bin: 8.75e1
  variant carriers: 160
genotype quality: GenotypeQuality
  all individuals: 476
  bin: 5.75e1
  variant carriers: 179
hgvs: c.371-5C>T
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 1055
  allele frequency: 2.032755298651252e-1
  allele num: 5190
  num of homozygotes: 0
population: African
  type: Population
  allele count: 579
  allele frequency: 1.11260568793236e-1
  allele num: 5204
  num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum

6-32549620-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549620
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549620
    reference: chr 6
allele count: 1220
allele frequency: 1.76714273298763e-2
allele num: 69038
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-5C>A
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7109
  bin: 1.75e1
  variant carriers: 200
genotype depth: GenotypeDepth
  all individuals: 5342
  bin: 1.25e1
  variant carriers: 109
genotype depth: GenotypeDepth
  all individuals: 4108
  bin: 3.75e1
  variant carriers: 113
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7006
  bin: 2.75e1
  variant carriers: 182
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 6.25e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 2.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2332
  bin: 7.5e0
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 5.25e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 2005
  bin: 4.75e1
  variant carriers: 73
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 7.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 6.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 5820
  bin: 3.25e1
  variant carriers: 144
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 5.75e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 2882
  bin: 4.25e1
  variant carriers: 73
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7585
  bin: 2.25e1
  variant carriers: 226
genotype quality: GenotypeQuality
  all individuals: 1696
  bin: 3.75e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 1975
  bin: 3.25e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 1307
  bin: 4.75e1
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 6206
  bin: 2.5e0
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 1607
  bin: 1.25e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 1536
  bin: 2.75e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 912
  bin: 7.25e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 1415
  bin: 1.75e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 12220
  bin: 9.75e1
  variant carriers: 955
genotype quality: GenotypeQuality
  all individuals: 578
  bin: 8.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 476
  bin: 5.75e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 1842
  bin: 6.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 4975
  bin: 7.5e0
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 1151
  bin: 7.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 1021
  bin: 4.25e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 3655
  bin: 2.25e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 856
  bin: 5.25e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 702
  bin: 9.25e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 973
  bin: 8.25e1
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 4094
  bin: 6.25e1
  variant carriers: 19
hgvs: c.371-5C>A
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 80
  allele frequency: 8.671146759158898e-3
  allele num: 9226
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 46
  allele frequency: 1.152304609218437e-2
  allele num: 3992
  num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum

6-32549621-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549621
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549620
    reference: chr 6
allele count: 1
allele frequency: 1.918207626793524e-5
allele num: 52132
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-7delC
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 3559
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6392
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5902
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1640
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2446
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5114
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7329
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7691
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2484
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2858
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1118
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4244
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 852
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 765
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9780
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 966
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1455
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2860
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4920
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4827
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2321
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1710
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 845
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 533
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2193
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1899
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1887
  bin: 6.75e1
  variant carriers: 0
hgvs: c.371-7delC
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3276
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4134
  num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: AG
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

6-32549622-G-GA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549622
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549623
    reference: chr 6
allele count: 0
allele frequency: 0.0e0
allele num: 50932
alternate allele: GA
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-8dupT
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 3282
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7463
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2237
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1488
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6567
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8038
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4892
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6296
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1502
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4456
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2727
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8262
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3317
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3666
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2086
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1015
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7447
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2459
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 779
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 992
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1613
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1762
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1547
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 719
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1151
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3202
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4182
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2968
  num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

6-32549622-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549622
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549622
    reference: chr 6
allele count: 3
allele frequency: 5.890206549909683e-5
allele num: 50932
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-7C>A
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 6567
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4892
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2237
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1488
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6296
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8038
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3282
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7463
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3666
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 719
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7447
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1502
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8262
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2459
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1547
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1015
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1762
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1151
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2727
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 779
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 992
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3317
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4456
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2086
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1613
  bin: 6.75e1
  variant carriers: 0
hgvs: c.371-7C>A
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 1
  allele frequency: 1.249687578105474e-4
  allele num: 8002
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2968
  num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ

6-32549622-GA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549622
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549621
    reference: chr 6
allele count: 2847
allele frequency: 5.58980601586429e-2
allele num: 50932
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-8delT
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 2237
  bin: 4.25e1
  variant carriers: 181
genotype depth: GenotypeDepth
  all individuals: 1488
  bin: 4.75e1
  variant carriers: 161
genotype depth: GenotypeDepth
  all individuals: 6567
  bin: 1.25e1
  variant carriers: 335
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 5.75e1
  variant carriers: 70
genotype depth: GenotypeDepth
  all individuals: 6296
  bin: 2.75e1
  variant carriers: 367
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 9.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 7.5e0
  variant carriers: 130
genotype depth: GenotypeDepth
  all individuals: 8038
  bin: 1.75e1
  variant carriers: 462
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 6.25e1
  variant carriers: 62
genotype depth: GenotypeDepth
  all individuals: 4892
  bin: 3.25e1
  variant carriers: 304
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 5.25e1
  variant carriers: 99
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 2.5e0
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 7463
  bin: 2.25e1
  variant carriers: 541
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 3282
  bin: 3.75e1
  variant carriers: 234
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 5.75e1
  variant carriers: 28
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 9.25e1
  variant carriers: 34
genotype quality: GenotypeQuality
  all individuals: 1762
  bin: 3.75e1
  variant carriers: 32
genotype quality: GenotypeQuality
  all individuals: 1547
  bin: 2.75e1
  variant carriers: 38
genotype quality: GenotypeQuality
  all individuals: 2459
  bin: 1.25e1
  variant carriers: 36
genotype quality: GenotypeQuality
  all individuals: 8262
  bin: 2.5e0
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 7447
  bin: 7.5e0
  variant carriers: 36
genotype quality: GenotypeQuality
  all individuals: 3317
  bin: 6.25e1
  variant carriers: 37
genotype quality: GenotypeQuality
  all individuals: 1613
  bin: 6.75e1
  variant carriers: 41
genotype quality: GenotypeQuality
  all individuals: 4456
  bin: 9.75e1
  variant carriers: 2424
genotype quality: GenotypeQuality
  all individuals: 1502
  bin: 4.75e1
  variant carriers: 39
genotype quality: GenotypeQuality
  all individuals: 3666
  bin: 2.25e1
  variant carriers: 49
genotype quality: GenotypeQuality
  all individuals: 2086
  bin: 3.25e1
  variant carriers: 38
genotype quality: GenotypeQuality
  all individuals: 779
  bin: 8.25e1
  variant carriers: 36
genotype quality: GenotypeQuality
  all individuals: 2727
  bin: 1.75e1
  variant carriers: 36
genotype quality: GenotypeQuality
  all individuals: 1151
  bin: 5.25e1
  variant carriers: 43
genotype quality: GenotypeQuality
  all individuals: 992
  bin: 4.25e1
  variant carriers: 37
genotype quality: GenotypeQuality
  all individuals: 719
  bin: 7.25e1
  variant carriers: 33
genotype quality: GenotypeQuality
  all individuals: 1015
  bin: 7.75e1
  variant carriers: 44
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 8.75e1
  variant carriers: 35
hgvs: c.371-8delT
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 147
  allele frequency: 4.590880699562773e-2
  allele num: 3202
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 272
  allele frequency: 7.597765363128492e-2
  allele num: 3580
  num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: GA
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum

6-32549624-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549624
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549624
    reference: chr 6
allele count: 1
allele frequency: 2.253571911479695e-5
allele num: 44374
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-9T>A
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8037
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6405
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4828
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6600
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7426
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3268
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1472
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1504
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2828
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2453
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11717
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2742
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7262
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 430
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 981
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1766
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1476
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1572
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 697
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 946
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2079
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3542
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 519
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1319
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1843
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3002
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 372
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7138
  num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: QD

6-32549625-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549625
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549625
    reference: chr 6
allele count: 1345
allele frequency: 2.643890548828432e-2
allele num: 50872
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-10T>C
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 2.5e0
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 6376
  bin: 2.75e1
  variant carriers: 239
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 7.5e0
  variant carriers: 102
genotype depth: GenotypeDepth
  all individuals: 7546
  bin: 2.25e1
  variant carriers: 302
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 6.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 8231
  bin: 1.75e1
  variant carriers: 277
genotype depth: GenotypeDepth
  all individuals: 3244
  bin: 3.75e1
  variant carriers: 90
genotype depth: GenotypeDepth
  all individuals: 4767
  bin: 3.25e1
  variant carriers: 167
genotype depth: GenotypeDepth
  all individuals: 6887
  bin: 1.25e1
  variant carriers: 173
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 5.25e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 1441
  bin: 4.75e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 2103
  bin: 4.25e1
  variant carriers: 67
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 5.75e1
  variant carriers: 28
genotype quality: GenotypeQuality
  all individuals: 1726
  bin: 2.75e1
  variant carriers: 38
genotype quality: GenotypeQuality
  all individuals: 2797
  bin: 1.25e1
  variant carriers: 53
genotype quality: GenotypeQuality
  all individuals: 1081
  bin: 7.75e1
  variant carriers: 52
genotype quality: GenotypeQuality
  all individuals: 3313
  bin: 1.75e1
  variant carriers: 53
genotype quality: GenotypeQuality
  all individuals: 1636
  bin: 6.75e1
  variant carriers: 50
genotype quality: GenotypeQuality
  all individuals: 580
  bin: 5.75e1
  variant carriers: 56
genotype quality: GenotypeQuality
  all individuals: 812
  bin: 8.25e1
  variant carriers: 41
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 9.25e1
  variant carriers: 30
genotype quality: GenotypeQuality
  all individuals: 2296
  bin: 3.25e1
  variant carriers: 51
genotype quality: GenotypeQuality
  all individuals: 755
  bin: 7.25e1
  variant carriers: 47
genotype quality: GenotypeQuality
  all individuals: 7812
  bin: 7.5e0
  variant carriers: 52
genotype quality: GenotypeQuality
  all individuals: 3861
  bin: 2.25e1
  variant carriers: 68
genotype quality: GenotypeQuality
  all individuals: 1666
  bin: 4.75e1
  variant carriers: 56
genotype quality: GenotypeQuality
  all individuals: 2972
  bin: 6.25e1
  variant carriers: 52
genotype quality: GenotypeQuality
  all individuals: 7563
  bin: 2.5e0
  variant carriers: 43
genotype quality: GenotypeQuality
  all individuals: 1104
  bin: 4.25e1
  variant carriers: 52
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 8.75e1
  variant carriers: 38
genotype quality: GenotypeQuality
  all individuals: 2897
  bin: 9.75e1
  variant carriers: 685
genotype quality: GenotypeQuality
  all individuals: 1410
  bin: 5.25e1
  variant carriers: 48
genotype quality: GenotypeQuality
  all individuals: 1936
  bin: 3.75e1
  variant carriers: 60
num of homozygotes: 3
population: East Asian
  type: Population
  allele count: 52
  allele frequency: 1.43329658213892e-2
  allele num: 3628
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 84
  allele frequency: 2.730819245773732e-2
  allele num: 3076
  num of homozygotes: 0
population: African
  type: Population
  allele count: 120
  allele frequency: 2.814258911819887e-2
  allele num: 4264
  num of homozygotes: 1
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: FS
site quality: MQ
site quality: ClippingRankSum

http://identifiers.org/exac.variant/6-32549625-AAAC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549625
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549622
    reference: chr 6
allele count: 2
allele frequency: 3.931435760339676e-5
allele num: 50872
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-13_371-11delGTT
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6887
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3244
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4767
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7546
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2103
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1441
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8231
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6376
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1104
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 812
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1636
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2797
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7812
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2972
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2296
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7563
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1726
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1081
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1936
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3861
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 580
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1410
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2897
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3313
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 755
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1666
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3076
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3628
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7766
  num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
reference allele: AAAC
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS

http://identifiers.org/exac.variant/6-32549626-AAC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549626
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549624
    reference: chr 6
allele count: 32998
allele frequency: 3.817180667700067e-1
allele num: 86446
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-13_371-12delGT
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: intron
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 4476
  bin: 3.25e1
  variant carriers: 2697
genotype depth: GenotypeDepth
  all individuals: 7780
  bin: 7.5e0
  variant carriers: 5709
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 2.5e0
  variant carriers: 956
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.75e1
  variant carriers: 146
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 4.75e1
  variant carriers: 792
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 6.25e1
  variant carriers: 245
genotype depth: GenotypeDepth
  all individuals: 6144
  bin: 2.75e1
  variant carriers: 3710
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 5.75e1
  variant carriers: 367
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 9.75e1
  variant carriers: 97
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.75e1
  variant carriers: 69
genotype depth: GenotypeDepth
  all individuals: 9776
  bin: 1.75e1
  variant carriers: 7211
genotype depth: GenotypeDepth
  all individuals: 11417
  bin: 1.25e1
  variant carriers: 8611
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.75e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 1894
  bin: 4.25e1
  variant carriers: 1177
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.25e1
  variant carriers: 109
genotype depth: GenotypeDepth
  all individuals: 7603
  bin: 2.25e1
  variant carriers: 5236
genotype depth: GenotypeDepth
  all individuals: 2953
  bin: 3.75e1
  variant carriers: 1867
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 5.25e1
  variant carriers: 533
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 60
genotype quality: GenotypeQuality
  all individuals: 1946
  bin: 6.25e1
  variant carriers: 287
genotype quality: GenotypeQuality
  all individuals: 929
  bin: 1.25e1
  variant carriers: 267
genotype quality: GenotypeQuality
  all individuals: 1513
  bin: 7.5e0
  variant carriers: 222
genotype quality: GenotypeQuality
  all individuals: 1075
  bin: 2.75e1
  variant carriers: 306
genotype quality: GenotypeQuality
  all individuals: 1093
  bin: 6.75e1
  variant carriers: 277
genotype quality: GenotypeQuality
  all individuals: 809
  bin: 5.25e1
  variant carriers: 291
genotype quality: GenotypeQuality
  all individuals: 4085
  bin: 2.5e0
  variant carriers: 146
genotype quality: GenotypeQuality
  all individuals: 567
  bin: 9.25e1
  variant carriers: 296
genotype quality: GenotypeQuality
  all individuals: 1573
  bin: 2.25e1
  variant carriers: 318
genotype quality: GenotypeQuality
  all individuals: 776
  bin: 4.25e1
  variant carriers: 278
genotype quality: GenotypeQuality
  all individuals: 776
  bin: 7.75e1
  variant carriers: 281
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 8.25e1
  variant carriers: 304
genotype quality: GenotypeQuality
  all individuals: 1037
  bin: 3.75e1
  variant carriers: 296
genotype quality: GenotypeQuality
  all individuals: 991
  bin: 4.75e1
  variant carriers: 317
genotype quality: GenotypeQuality
  all individuals: 1155
  bin: 3.25e1
  variant carriers: 306
genotype quality: GenotypeQuality
  all individuals: 697
  bin: 7.25e1
  variant carriers: 278
genotype quality: GenotypeQuality
  all individuals: 599
  bin: 5.75e1
  variant carriers: 287
genotype quality: GenotypeQuality
  all individuals: 1008
  bin: 1.75e1
  variant carriers: 305
genotype quality: GenotypeQuality
  all individuals: 35622
  bin: 9.75e1
  variant carriers: 34302
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 8.75e1
  variant carriers: 302
num of homozygotes: 512
population: African
  type: Population
  allele count: 3083
  allele frequency: 4.098643977665514e-1
  allele num: 7522
  num of homozygotes: 52
population: European (Non-Finnish)
  type: Population
  allele count: 19471
  allele frequency: 3.902629680109035e-1
  allele num: 49892
  num of homozygotes: 191
population: European (Finnish)
  type: Population
  allele count: 1887
  allele frequency: 3.868388683886839e-1
  allele num: 4878
  num of homozygotes: 40
population: East Asian
population: South Asian
population: Other
population: Latino
reference allele: AAC
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQ

6-32549626-AACAACGTAGAGGG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549626
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549613
    reference: chr 6
allele count: 9
allele frequency: 1.041112370728547e-4
allele num: 86446
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: intron
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7603
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9776
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7780
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4476
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6144
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1894
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2953
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11417
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 776
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 35622
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 929
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4085
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 567
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1573
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 991
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 697
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1037
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1513
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1008
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1093
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1075
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1155
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 809
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 599
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1946
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 776
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 600
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7522
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 3
  allele frequency: 4.112969564025226e-4
  allele num: 7294
  num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: AACAACGTAGAGGG
site quality: QD
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/6-32549627-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549627
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549627
    reference: chr 6
allele count: 8550
allele frequency: 1.68898897712457e-1
allele num: 50622
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-12T>G
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.75e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 2.5e0
  variant carriers: 212
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 4.25e1
  variant carriers: 307
genotype depth: GenotypeDepth
  all individuals: 4650
  bin: 7.5e0
  variant carriers: 1189
genotype depth: GenotypeDepth
  all individuals: 2654
  bin: 3.25e1
  variant carriers: 668
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 3.75e1
  variant carriers: 436
genotype depth: GenotypeDepth
  all individuals: 7054
  bin: 1.25e1
  variant carriers: 2023
genotype depth: GenotypeDepth
  all individuals: 4516
  bin: 2.25e1
  variant carriers: 1392
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 5.25e1
  variant carriers: 104
genotype depth: GenotypeDepth
  all individuals: 5856
  bin: 1.75e1
  variant carriers: 1802
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 4.75e1
  variant carriers: 186
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.25e1
  variant carriers: 58
genotype depth: GenotypeDepth
  all individuals: 3792
  bin: 2.75e1
  variant carriers: 943
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 5.75e1
  variant carriers: 88
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 5.25e1
  variant carriers: 78
genotype quality: GenotypeQuality
  all individuals: 656
  bin: 3.75e1
  variant carriers: 104
genotype quality: GenotypeQuality
  all individuals: 598
  bin: 1.25e1
  variant carriers: 86
genotype quality: GenotypeQuality
  all individuals: 731
  bin: 3.25e1
  variant carriers: 88
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 8.75e1
  variant carriers: 73
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 8.25e1
  variant carriers: 82
genotype quality: GenotypeQuality
  all individuals: 727
  bin: 6.75e1
  variant carriers: 73
genotype quality: GenotypeQuality
  all individuals: 559
  bin: 1.75e1
  variant carriers: 104
genotype quality: GenotypeQuality
  all individuals: 833
  bin: 7.5e0
  variant carriers: 83
genotype quality: GenotypeQuality
  all individuals: 3403
  bin: 2.5e0
  variant carriers: 49
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 4.25e1
  variant carriers: 67
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 7.75e1
  variant carriers: 83
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 5.75e1
  variant carriers: 74
genotype quality: GenotypeQuality
  all individuals: 19843
  bin: 9.75e1
  variant carriers: 7920
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 9.25e1
  variant carriers: 107
genotype quality: GenotypeQuality
  all individuals: 956
  bin: 2.25e1
  variant carriers: 99
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 7.25e1
  variant carriers: 85
genotype quality: GenotypeQuality
  all individuals: 614
  bin: 4.75e1
  variant carriers: 132
genotype quality: GenotypeQuality
  all individuals: 711
  bin: 2.75e1
  variant carriers: 78
genotype quality: GenotypeQuality
  all individuals: 1554
  bin: 6.25e1
  variant carriers: 78
num of homozygotes: 530
population: African
  type: Population
  allele count: 534
  allele frequency: 1.111573688592839e-1
  allele num: 4804
  num of homozygotes: 25
population: East Asian
  type: Population
  allele count: 167
  allele frequency: 5.867884750527055e-2
  allele num: 2846
  num of homozygotes: 6
population: European (Finnish)
  type: Population
  allele count: 1092
  allele frequency: 3.251935675997618e-1
  allele num: 3358
  num of homozygotes: 123
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/6-32549627-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549627
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549626
    reference: chr 6
allele count: 10918
allele frequency: 2.156769783888428e-1
allele num: 50622
alternate allele: A
canonical: false
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 4650
  bin: 7.5e0
  variant carriers: 2283
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.75e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 3.75e1
  variant carriers: 540
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 7054
  bin: 1.25e1
  variant carriers: 3455
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 4.25e1
  variant carriers: 372
genotype depth: GenotypeDepth
  all individuals: 3792
  bin: 2.75e1
  variant carriers: 1101
genotype depth: GenotypeDepth
  all individuals: 5856
  bin: 1.75e1
  variant carriers: 2582
genotype depth: GenotypeDepth
  all individuals: 2654
  bin: 3.25e1
  variant carriers: 755
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 4516
  bin: 2.25e1
  variant carriers: 1636
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 2.5e0
  variant carriers: 456
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 5.25e1
  variant carriers: 174
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 4.75e1
  variant carriers: 236
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 5.75e1
  variant carriers: 145
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.25e1
  variant carriers: 87
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 8.75e1
  variant carriers: 143
genotype quality: GenotypeQuality
  all individuals: 656
  bin: 3.75e1
  variant carriers: 165
genotype quality: GenotypeQuality
  all individuals: 711
  bin: 2.75e1
  variant carriers: 147
genotype quality: GenotypeQuality
  all individuals: 727
  bin: 6.75e1
  variant carriers: 143
genotype quality: GenotypeQuality
  all individuals: 559
  bin: 1.75e1
  variant carriers: 151
genotype quality: GenotypeQuality
  all individuals: 598
  bin: 1.25e1
  variant carriers: 156
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 7.25e1
  variant carriers: 168
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 4.25e1
  variant carriers: 126
genotype quality: GenotypeQuality
  all individuals: 833
  bin: 7.5e0
  variant carriers: 154
genotype quality: GenotypeQuality
  all individuals: 1554
  bin: 6.25e1
  variant carriers: 166
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 8.25e1
  variant carriers: 162
genotype quality: GenotypeQuality
  all individuals: 3403
  bin: 2.5e0
  variant carriers: 97
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 5.75e1
  variant carriers: 149
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 5.25e1
  variant carriers: 126
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 9.25e1
  variant carriers: 146
genotype quality: GenotypeQuality
  all individuals: 956
  bin: 2.25e1
  variant carriers: 139
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 7.75e1
  variant carriers: 151
genotype quality: GenotypeQuality
  all individuals: 19843
  bin: 9.75e1
  variant carriers: 11208
genotype quality: GenotypeQuality
  all individuals: 731
  bin: 3.25e1
  variant carriers: 145
genotype quality: GenotypeQuality
  all individuals: 614
  bin: 4.75e1
  variant carriers: 152
num of homozygotes: 11
population: Latino
  type: Population
  allele count: 678
  allele frequency: 2.121401752190238e-1
  allele num: 3196
  num of homozygotes: 1
population: East Asian
  type: Population
  allele count: 886
  allele frequency: 3.113141250878426e-1
  allele num: 2846
  num of homozygotes: 0
population: African
  type: Population
  allele count: 1411
  allele frequency: 2.937135720233139e-1
  allele num: 4804
  num of homozygotes: 1
population: Other
  type: Population
  allele count: 60
  allele frequency: 1.685393258426966e-1
  allele num: 356
  num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: AC
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

http://identifiers.org/exac.variant/6-32549627-ACAAC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549627
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549623
    reference: chr 6
allele count: 0
allele frequency: 0.0e0
allele num: 50622
alternate allele: A
canonical: false
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3792
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5856
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4516
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4650
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2654
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7054
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 598
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 956
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 833
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 656
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 559
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19843
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 731
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 711
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3403
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1554
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 614
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 727
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3196
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 356
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4804
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 5982
  num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: ACAAC
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum

6-32549627-ACAACGT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549627
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549621
    reference: chr 6
allele count: 23
allele frequency: 4.543479119750306e-4
allele num: 50622
alternate allele: A
canonical: false
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 7054
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2654
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3792
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4650
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5856
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4516
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 956
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19843
  bin: 9.75e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 559
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 833
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 731
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 711
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3403
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 598
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1554
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 727
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 656
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 614
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 1
  allele frequency: 3.513703443429375e-4
  allele num: 2846
  num of homozygotes: 0
population: African
  type: Population
  allele count: 1
  allele frequency: 2.081598667776853e-4
  allele num: 4804
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 2
  allele frequency: 5.955926146515784e-4
  allele num: 3358
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 6
  allele frequency: 1.003009027081244e-3
  allele num: 5982
  num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: ACAACGT
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

6-32549627-ACAACGTAG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549627
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549619
    reference: chr 6
allele count: 7
allele frequency: 1.382797992967484e-4
allele num: 50622
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4650
  bin: 7.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5856
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7054
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4516
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3792
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2654
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 598
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1554
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 727
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 731
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 956
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3403
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 833
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 656
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19843
  bin: 9.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 614
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 711
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 559
  bin: 1.75e1
  variant carriers: 1
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3196
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 3
  allele frequency: 9.973404255319148e-5
  allele num: 30080
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2846
  num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: ACAACGTAG
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/6-32549628-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549628
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549628
    reference: chr 6
allele count: 23162
allele frequency: 4.328860314731058e-1
allele num: 53506
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-13G>T
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 3897
  bin: 7.5e0
  variant carriers: 3455
genotype depth: GenotypeDepth
  all individuals: 6861
  bin: 1.25e1
  variant carriers: 5782
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 77
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 4.25e1
  variant carriers: 829
genotype depth: GenotypeDepth
  all individuals: 6266
  bin: 1.75e1
  variant carriers: 5043
genotype depth: GenotypeDepth
  all individuals: 1667
  bin: 3.75e1
  variant carriers: 1187
genotype depth: GenotypeDepth
  all individuals: 4776
  bin: 2.25e1
  variant carriers: 3644
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 5.25e1
  variant carriers: 354
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 171
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 4.75e1
  variant carriers: 561
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 2.5e0
  variant carriers: 475
genotype depth: GenotypeDepth
  all individuals: 3990
  bin: 2.75e1
  variant carriers: 2587
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 9.75e1
  variant carriers: 102
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.75e1
  variant carriers: 253
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 3.25e1
  variant carriers: 1842
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 58
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 115
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 1.25e1
  variant carriers: 233
genotype quality: GenotypeQuality
  all individuals: 453
  bin: 8.25e1
  variant carriers: 290
genotype quality: GenotypeQuality
  all individuals: 502
  bin: 7.75e1
  variant carriers: 304
genotype quality: GenotypeQuality
  all individuals: 478
  bin: 7.25e1
  variant carriers: 300
genotype quality: GenotypeQuality
  all individuals: 573
  bin: 1.75e1
  variant carriers: 324
genotype quality: GenotypeQuality
  all individuals: 847
  bin: 2.25e1
  variant carriers: 329
genotype quality: GenotypeQuality
  all individuals: 615
  bin: 3.25e1
  variant carriers: 307
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 4.25e1
  variant carriers: 266
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 9.25e1
  variant carriers: 362
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 2.75e1
  variant carriers: 264
genotype quality: GenotypeQuality
  all individuals: 445
  bin: 5.25e1
  variant carriers: 307
genotype quality: GenotypeQuality
  all individuals: 662
  bin: 6.75e1
  variant carriers: 303
genotype quality: GenotypeQuality
  all individuals: 2183
  bin: 2.5e0
  variant carriers: 168
genotype quality: GenotypeQuality
  all individuals: 562
  bin: 7.5e0
  variant carriers: 224
genotype quality: GenotypeQuality
  all individuals: 563
  bin: 3.75e1
  variant carriers: 326
genotype quality: GenotypeQuality
  all individuals: 1367
  bin: 6.25e1
  variant carriers: 291
genotype quality: GenotypeQuality
  all individuals: 21742
  bin: 9.75e1
  variant carriers: 21111
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 5.75e1
  variant carriers: 295
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 8.75e1
  variant carriers: 288
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 4.75e1
  variant carriers: 350
num of homozygotes: 962
population: African
  type: Population
  allele count: 1364
  allele frequency: 4.128329297820823e-1
  allele num: 3304
  num of homozygotes: 37
population: Latino
  type: Population
  allele count: 2102
  allele frequency: 4.58151700087184e-1
  allele num: 4588
  num of homozygotes: 85
population: East Asian
  type: Population
  allele count: 1581
  allele frequency: 4.20926517571885e-1
  allele num: 3756
  num of homozygotes: 16
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/6-32549628-CAA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549628
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549626
    reference: chr 6
allele count: 1
allele frequency: 1.86894927671663e-5
allele num: 53506
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-15_371-14delTT
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6861
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4776
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1667
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3990
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3897
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6266
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 847
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 453
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 445
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 562
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 573
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 502
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2183
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 478
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1367
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 615
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21742
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 662
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 563
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 434
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3756
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4588
  num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: CAA
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: QD

6-32549629-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549629
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549629
    reference: chr 6
allele count: 1
allele frequency: 6.333924499619965e-5
allele num: 15788
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-14T>C
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4790
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5313
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4716
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4982
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3526
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2962
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 912
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 684
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 552
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 549
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23808
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 607
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 596
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1352
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 909
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 948
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 1.195314367678699e-4
  allele num: 8366
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 126
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 832
  num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD

6-32549630-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549630
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549630
    reference: chr 6
allele count: 0
allele frequency: 0.0e0
allele num: 77996
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-15T>A
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9637
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7240
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2196
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9970
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1677
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2542
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7606
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4076
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5961
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4946
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2592
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2060
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1827
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4251
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1479
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2576
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 815
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1044
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3566
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5630
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4804
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3079
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1315
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3156
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 590
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3121
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4045
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1135
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2170
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6620
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4726
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 44974
  num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: Latino
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/6-32549630-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549630
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549629
    reference: chr 6
allele count: 1241
allele frequency: 1.591107236268527e-2
allele num: 77996
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-16delG
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 9637
  bin: 1.75e1
  variant carriers: 296
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 4.75e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 1677
  bin: 4.25e1
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 9970
  bin: 1.25e1
  variant carriers: 195
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 6.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 5961
  bin: 2.75e1
  variant carriers: 228
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 7240
  bin: 2.25e1
  variant carriers: 258
genotype depth: GenotypeDepth
  all individuals: 2196
  bin: 2.5e0
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7606
  bin: 7.5e0
  variant carriers: 112
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2542
  bin: 3.75e1
  variant carriers: 76
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 5.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4076
  bin: 3.25e1
  variant carriers: 128
genotype quality: GenotypeQuality
  all individuals: 2170
  bin: 6.75e1
  variant carriers: 51
genotype quality: GenotypeQuality
  all individuals: 3566
  bin: 7.5e0
  variant carriers: 43
genotype quality: GenotypeQuality
  all individuals: 4251
  bin: 3.75e1
  variant carriers: 54
genotype quality: GenotypeQuality
  all individuals: 5630
  bin: 2.25e1
  variant carriers: 61
genotype quality: GenotypeQuality
  all individuals: 815
  bin: 9.25e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 2592
  bin: 5.25e1
  variant carriers: 44
genotype quality: GenotypeQuality
  all individuals: 1044
  bin: 7.25e1
  variant carriers: 44
genotype quality: GenotypeQuality
  all individuals: 4804
  bin: 1.75e1
  variant carriers: 47
genotype quality: GenotypeQuality
  all individuals: 1827
  bin: 2.5e0
  variant carriers: 37
genotype quality: GenotypeQuality
  all individuals: 4045
  bin: 9.75e1
  variant carriers: 678
genotype quality: GenotypeQuality
  all individuals: 3079
  bin: 4.75e1
  variant carriers: 44
genotype quality: GenotypeQuality
  all individuals: 1479
  bin: 7.75e1
  variant carriers: 46
genotype quality: GenotypeQuality
  all individuals: 2576
  bin: 1.25e1
  variant carriers: 49
genotype quality: GenotypeQuality
  all individuals: 590
  bin: 8.75e1
  variant carriers: 35
genotype quality: GenotypeQuality
  all individuals: 4946
  bin: 3.25e1
  variant carriers: 46
genotype quality: GenotypeQuality
  all individuals: 1135
  bin: 8.25e1
  variant carriers: 37
genotype quality: GenotypeQuality
  all individuals: 1315
  bin: 5.75e1
  variant carriers: 53
genotype quality: GenotypeQuality
  all individuals: 3121
  bin: 2.75e1
  variant carriers: 34
genotype quality: GenotypeQuality
  all individuals: 2060
  bin: 4.25e1
  variant carriers: 42
genotype quality: GenotypeQuality
  all individuals: 3156
  bin: 6.25e1
  variant carriers: 49
num of homozygotes: 3
population: European (Non-Finnish)
  type: Population
  allele count: 891
  allele frequency: 1.981144661359897e-2
  allele num: 44974
  num of homozygotes: 2
population: South Asian
  type: Population
  allele count: 37
  allele frequency: 4.025239338555265e-3
  allele num: 9192
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 48
  allele frequency: 8.301625735039779e-3
  allele num: 5782
  num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: AC
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff

6-32549631-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549631
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549631
    reference: chr 6
allele count: 17059
allele frequency: 1.961120180258892e-1
allele num: 86986
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-16G>A
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.25e1
  variant carriers: 72
genotype depth: GenotypeDepth
  all individuals: 2708
  bin: 2.5e0
  variant carriers: 492
genotype depth: GenotypeDepth
  all individuals: 9957
  bin: 1.75e1
  variant carriers: 4155
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 12294
  bin: 1.25e1
  variant carriers: 4475
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 4008
  bin: 3.25e1
  variant carriers: 1296
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 5.75e1
  variant carriers: 111
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 7340
  bin: 2.25e1
  variant carriers: 2973
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 5.25e1
  variant carriers: 177
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 9626
  bin: 7.5e0
  variant carriers: 2409
genotype depth: GenotypeDepth
  all individuals: 1574
  bin: 4.25e1
  variant carriers: 518
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 4.75e1
  variant carriers: 285
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2454
  bin: 3.75e1
  variant carriers: 794
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.75e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 5850
  bin: 2.75e1
  variant carriers: 1996
genotype quality: GenotypeQuality
  all individuals: 932
  bin: 3.75e1
  variant carriers: 255
genotype quality: GenotypeQuality
  all individuals: 754
  bin: 7.5e0
  variant carriers: 209
genotype quality: GenotypeQuality
  all individuals: 1651
  bin: 6.25e1
  variant carriers: 241
genotype quality: GenotypeQuality
  all individuals: 842
  bin: 4.75e1
  variant carriers: 260
genotype quality: GenotypeQuality
  all individuals: 1194
  bin: 2.25e1
  variant carriers: 235
genotype quality: GenotypeQuality
  all individuals: 820
  bin: 4.25e1
  variant carriers: 219
genotype quality: GenotypeQuality
  all individuals: 819
  bin: 5.25e1
  variant carriers: 224
genotype quality: GenotypeQuality
  all individuals: 40381
  bin: 9.75e1
  variant carriers: 15636
genotype quality: GenotypeQuality
  all individuals: 809
  bin: 8.75e1
  variant carriers: 230
genotype quality: GenotypeQuality
  all individuals: 829
  bin: 1.25e1
  variant carriers: 247
genotype quality: GenotypeQuality
  all individuals: 1858
  bin: 2.5e0
  variant carriers: 164
genotype quality: GenotypeQuality
  all individuals: 860
  bin: 8.25e1
  variant carriers: 234
genotype quality: GenotypeQuality
  all individuals: 942
  bin: 2.75e1
  variant carriers: 209
genotype quality: GenotypeQuality
  all individuals: 887
  bin: 1.75e1
  variant carriers: 231
genotype quality: GenotypeQuality
  all individuals: 859
  bin: 7.75e1
  variant carriers: 211
genotype quality: GenotypeQuality
  all individuals: 835
  bin: 7.25e1
  variant carriers: 213
genotype quality: GenotypeQuality
  all individuals: 761
  bin: 5.75e1
  variant carriers: 214
genotype quality: GenotypeQuality
  all individuals: 862
  bin: 9.25e1
  variant carriers: 250
genotype quality: GenotypeQuality
  all individuals: 975
  bin: 3.25e1
  variant carriers: 237
genotype quality: GenotypeQuality
  all individuals: 1017
  bin: 6.75e1
  variant carriers: 203
num of homozygotes: 572
population: European (Non-Finnish)
  type: Population
  allele count: 10873
  allele frequency: 2.143138723538456e-1
  allele num: 50734
  num of homozygotes: 354
population: Latino
  type: Population
  allele count: 1531
  allele frequency: 2.143057110862262e-1
  allele num: 7144
  num of homozygotes: 37
population: Other
  type: Population
  allele count: 131
  allele frequency: 2.066246056782334e-1
  allele num: 634
  num of homozygotes: 7
population: European (Finnish)
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/6-32549631-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549631
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549631
    reference: chr 6
allele count: 0
allele frequency: 0.0e0
allele num: 86986
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-16G>T
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7340
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2708
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5850
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4008
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1574
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12294
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9957
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9626
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2454
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 754
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 975
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 761
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1651
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 829
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40381
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 887
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 862
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 835
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 932
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 820
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 842
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 859
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 942
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 819
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1858
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 809
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 860
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1017
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1194
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7144
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 634
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 5140
  num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

6-32549631-C-CGG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549631
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549633
    reference: chr 6
allele count: 0
allele frequency: 0.0e0
allele num: 86986
alternate allele: CGG
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-17_371-16insCC
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 2454
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9626
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4008
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1574
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5850
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9957
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2708
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12294
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7340
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 975
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 862
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 819
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1858
  bin: 2.5e0
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 820
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 809
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 829
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 842
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 754
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 932
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 887
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 942
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 761
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1017
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40381
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1194
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 859
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1651
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 860
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 835
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7144
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9202
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 50734
  num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP

6-32549631-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549631
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549631
    reference: chr 6
allele count: 45109
allele frequency: 5.185777021589681e-1
allele num: 86986
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-16G>C
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 1574
  bin: 4.25e1
  variant carriers: 1182
genotype depth: GenotypeDepth
  all individuals: 2708
  bin: 2.5e0
  variant carriers: 1972
genotype depth: GenotypeDepth
  all individuals: 9626
  bin: 7.5e0
  variant carriers: 8257
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 4.75e1
  variant carriers: 777
genotype depth: GenotypeDepth
  all individuals: 2454
  bin: 3.75e1
  variant carriers: 1820
genotype depth: GenotypeDepth
  all individuals: 9957
  bin: 1.75e1
  variant carriers: 8340
genotype depth: GenotypeDepth
  all individuals: 12294
  bin: 1.25e1
  variant carriers: 10716
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 107
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.75e1
  variant carriers: 139
genotype depth: GenotypeDepth
  all individuals: 4008
  bin: 3.25e1
  variant carriers: 2802
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 78
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.25e1
  variant carriers: 213
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 5.25e1
  variant carriers: 485
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.25e1
  variant carriers: 58
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.75e1
  variant carriers: 140
genotype depth: GenotypeDepth
  all individuals: 7340
  bin: 2.25e1
  variant carriers: 5690
genotype depth: GenotypeDepth
  all individuals: 5850
  bin: 2.75e1
  variant carriers: 3993
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 5.75e1
  variant carriers: 353
genotype quality: GenotypeQuality
  all individuals: 819
  bin: 5.25e1
  variant carriers: 613
genotype quality: GenotypeQuality
  all individuals: 754
  bin: 7.5e0
  variant carriers: 435
genotype quality: GenotypeQuality
  all individuals: 975
  bin: 3.25e1
  variant carriers: 662
genotype quality: GenotypeQuality
  all individuals: 835
  bin: 7.25e1
  variant carriers: 609
genotype quality: GenotypeQuality
  all individuals: 942
  bin: 2.75e1
  variant carriers: 628
genotype quality: GenotypeQuality
  all individuals: 887
  bin: 1.75e1
  variant carriers: 614
genotype quality: GenotypeQuality
  all individuals: 1017
  bin: 6.75e1
  variant carriers: 653
genotype quality: GenotypeQuality
  all individuals: 1858
  bin: 2.5e0
  variant carriers: 393
genotype quality: GenotypeQuality
  all individuals: 40381
  bin: 9.75e1
  variant carriers: 35667
genotype quality: GenotypeQuality
  all individuals: 862
  bin: 9.25e1
  variant carriers: 676
genotype quality: GenotypeQuality
  all individuals: 809
  bin: 8.75e1
  variant carriers: 660
genotype quality: GenotypeQuality
  all individuals: 829
  bin: 1.25e1
  variant carriers: 534
genotype quality: GenotypeQuality
  all individuals: 820
  bin: 4.25e1
  variant carriers: 621
genotype quality: GenotypeQuality
  all individuals: 1651
  bin: 6.25e1
  variant carriers: 606
genotype quality: GenotypeQuality
  all individuals: 859
  bin: 7.75e1
  variant carriers: 629
genotype quality: GenotypeQuality
  all individuals: 842
  bin: 4.75e1
  variant carriers: 617
genotype quality: GenotypeQuality
  all individuals: 932
  bin: 3.75e1
  variant carriers: 657
genotype quality: GenotypeQuality
  all individuals: 1194
  bin: 2.25e1
  variant carriers: 644
genotype quality: GenotypeQuality
  all individuals: 761
  bin: 5.75e1
  variant carriers: 607
genotype quality: GenotypeQuality
  all individuals: 860
  bin: 8.25e1
  variant carriers: 673
num of homozygotes: 9287
population: East Asian
  type: Population
  allele count: 3761
  allele frequency: 5.752523707555828e-1
  allele num: 6538
  num of homozygotes: 811
population: South Asian
  type: Population
  allele count: 4326
  allele frequency: 4.701151923494892e-1
  allele num: 9202
  num of homozygotes: 941
population: European (Non-Finnish)
  type: Population
  allele count: 26058
  allele frequency: 5.136200575550912e-1
  allele num: 50734
  num of homozygotes: 5167
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

6-32549634-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549634
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549634
    reference: chr 6
allele count: 2
allele frequency: 2.267882251553499e-5
allele num: 88188
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-19T>A
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3903
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11389
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5691
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6636
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3451
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9972
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13870
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2054
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 831
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3787
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1496
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5229
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6665
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1988
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4197
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5843
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3621
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2968
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2044
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9906
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2729
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2718
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 501
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1059
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1160
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 718
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 654
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 5184
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 1.944012441679627e-5
  allele num: 51440
  num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Latino
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

6-32549635-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549635
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549635
    reference: chr 6
allele count: 1
allele frequency: 1.131554529612782e-5
allele num: 88374
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-20C>G
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 5724
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3942
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11379
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3444
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13898
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9848
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6734
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1824
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1969
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5217
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6476
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1487
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2731
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3868
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1159
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3142
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2914
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6628
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1859
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2719
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1059
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2034
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 502
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4194
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10415
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6808
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6596
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 5202
  num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: ClippingRankSum

6-32549636-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549636
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549636
    reference: chr 6
allele count: 1
allele frequency: 1.284686536485098e-5
allele num: 77840
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-21T>C
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3897
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5714
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3432
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9788
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6812
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13876
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1765
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11486
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1896
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3374
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6317
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1158
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1669
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 959
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3161
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2849
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12601
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5464
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1091
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 513
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1420
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4090
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1827
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7225
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 697
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 963
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2026
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 586
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7172
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 5776
  num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

6-32549636-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549636
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549636
    reference: chr 6
allele count: 10827
allele frequency: 1.390930113052415e-1
allele num: 77840
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-21T>A
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13876
  bin: 1.25e1
  variant carriers: 3374
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 4.25e1
  variant carriers: 329
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.25e1
  variant carriers: 62
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 11486
  bin: 7.5e0
  variant carriers: 2332
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 4.75e1
  variant carriers: 208
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 5.75e1
  variant carriers: 85
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.75e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 3432
  bin: 3.25e1
  variant carriers: 797
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.75e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.25e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 9788
  bin: 1.75e1
  variant carriers: 2590
genotype depth: GenotypeDepth
  all individuals: 6812
  bin: 2.25e1
  variant carriers: 1800
genotype depth: GenotypeDepth
  all individuals: 3897
  bin: 2.5e0
  variant carriers: 527
genotype depth: GenotypeDepth
  all individuals: 5714
  bin: 2.75e1
  variant carriers: 1241
genotype depth: GenotypeDepth
  all individuals: 1765
  bin: 3.75e1
  variant carriers: 479
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.25e1
  variant carriers: 156
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 3374
  bin: 7.5e0
  variant carriers: 178
genotype quality: GenotypeQuality
  all individuals: 1420
  bin: 4.25e1
  variant carriers: 207
genotype quality: GenotypeQuality
  all individuals: 2849
  bin: 2.75e1
  variant carriers: 203
genotype quality: GenotypeQuality
  all individuals: 6317
  bin: 2.5e0
  variant carriers: 164
genotype quality: GenotypeQuality
  all individuals: 3161
  bin: 3.75e1
  variant carriers: 211
genotype quality: GenotypeQuality
  all individuals: 7225
  bin: 2.25e1
  variant carriers: 208
genotype quality: GenotypeQuality
  all individuals: 1827
  bin: 4.75e1
  variant carriers: 207
genotype quality: GenotypeQuality
  all individuals: 12601
  bin: 9.75e1
  variant carriers: 10429
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 8.75e1
  variant carriers: 167
genotype quality: GenotypeQuality
  all individuals: 959
  bin: 8.25e1
  variant carriers: 176
genotype quality: GenotypeQuality
  all individuals: 2026
  bin: 6.75e1
  variant carriers: 207
genotype quality: GenotypeQuality
  all individuals: 4090
  bin: 3.25e1
  variant carriers: 228
genotype quality: GenotypeQuality
  all individuals: 1669
  bin: 1.25e1
  variant carriers: 190
genotype quality: GenotypeQuality
  all individuals: 513
  bin: 5.75e1
  variant carriers: 208
genotype quality: GenotypeQuality
  all individuals: 963
  bin: 7.25e1
  variant carriers: 198
genotype quality: GenotypeQuality
  all individuals: 5464
  bin: 6.25e1
  variant carriers: 194
genotype quality: GenotypeQuality
  all individuals: 697
  bin: 9.25e1
  variant carriers: 188
genotype quality: GenotypeQuality
  all individuals: 1091
  bin: 5.25e1
  variant carriers: 210
genotype quality: GenotypeQuality
  all individuals: 1158
  bin: 7.75e1
  variant carriers: 181
genotype quality: GenotypeQuality
  all individuals: 1896
  bin: 1.75e1
  variant carriers: 211
num of homozygotes: 22
population: European (Non-Finnish)
  type: Population
  allele count: 6719
  allele frequency: 1.48887608580039e-1
  allele num: 45128
  num of homozygotes: 15
population: South Asian
  type: Population
  allele count: 816
  allele frequency: 9.241223103057758e-2
  allele num: 8830
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 581
  allele frequency: 1.26359286646368e-1
  allele num: 4598
  num of homozygotes: 0
population: Latino
population: African
population: Other
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: BaseQRankSum

6-32549637-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549637
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549637
    reference: chr 6
allele count: 1
allele frequency: 1.148897058823529e-5
allele num: 87040
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-22C>A
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12039
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6180
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3296
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5881
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4245
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14622
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9581
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1301
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8018
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1935
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 608
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4305
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6566
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2372
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1143
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2522
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2655
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4229
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4802
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12609
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1796
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 981
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2159
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 950
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 5134
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 648
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6518
  num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum

6-32549638-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549638
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549638
    reference: chr 6
allele count: 8760
allele frequency: 1.007035453165954e-1
allele num: 86988
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-23C>T
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 4.75e1
  variant carriers: 145
genotype depth: GenotypeDepth
  all individuals: 3319
  bin: 3.25e1
  variant carriers: 634
genotype depth: GenotypeDepth
  all individuals: 11917
  bin: 7.5e0
  variant carriers: 1371
genotype depth: GenotypeDepth
  all individuals: 5742
  bin: 2.75e1
  variant carriers: 923
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 4108
  bin: 2.5e0
  variant carriers: 229
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 3.75e1
  variant carriers: 369
genotype depth: GenotypeDepth
  all individuals: 9788
  bin: 1.75e1
  variant carriers: 1925
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 4.25e1
  variant carriers: 258
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.75e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 14574
  bin: 1.25e1
  variant carriers: 2338
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.25e1
  variant carriers: 77
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6285
  bin: 2.25e1
  variant carriers: 1413
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 5.75e1
  variant carriers: 53
genotype quality: GenotypeQuality
  all individuals: 596
  bin: 2.5e0
  variant carriers: 33
genotype quality: GenotypeQuality
  all individuals: 3677
  bin: 2.75e1
  variant carriers: 66
genotype quality: GenotypeQuality
  all individuals: 5454
  bin: 3.25e1
  variant carriers: 72
genotype quality: GenotypeQuality
  all individuals: 1442
  bin: 4.25e1
  variant carriers: 54
genotype quality: GenotypeQuality
  all individuals: 1065
  bin: 7.75e1
  variant carriers: 77
genotype quality: GenotypeQuality
  all individuals: 3904
  bin: 3.75e1
  variant carriers: 90
genotype quality: GenotypeQuality
  all individuals: 1798
  bin: 1.25e1
  variant carriers: 63
genotype quality: GenotypeQuality
  all individuals: 2204
  bin: 6.75e1
  variant carriers: 67
genotype quality: GenotypeQuality
  all individuals: 1781
  bin: 4.75e1
  variant carriers: 110
genotype quality: GenotypeQuality
  all individuals: 811
  bin: 7.25e1
  variant carriers: 59
genotype quality: GenotypeQuality
  all individuals: 4129
  bin: 7.5e0
  variant carriers: 64
genotype quality: GenotypeQuality
  all individuals: 2009
  bin: 1.75e1
  variant carriers: 77
genotype quality: GenotypeQuality
  all individuals: 11378
  bin: 2.25e1
  variant carriers: 85
genotype quality: GenotypeQuality
  all individuals: 795
  bin: 8.25e1
  variant carriers: 68
genotype quality: GenotypeQuality
  all individuals: 734
  bin: 5.25e1
  variant carriers: 67
genotype quality: GenotypeQuality
  all individuals: 10029
  bin: 9.75e1
  variant carriers: 8531
genotype quality: GenotypeQuality
  all individuals: 6983
  bin: 6.25e1
  variant carriers: 75
genotype quality: GenotypeQuality
  all individuals: 548
  bin: 9.25e1
  variant carriers: 93
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 8.75e1
  variant carriers: 66
num of homozygotes: 541
population: South Asian
  type: Population
  allele count: 235
  allele frequency: 2.460217755443886e-2
  allele num: 9552
  num of homozygotes: 10
population: Latino
  type: Population
  allele count: 580
  allele frequency: 8.88208269525268e-2
  allele num: 6530
  num of homozygotes: 29
population: African
  type: Population
  allele count: 560
  allele frequency: 7.222078927005417e-2
  allele num: 7754
  num of homozygotes: 26
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff

6-32549638-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549638
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549638
    reference: chr 6
allele count: 1
allele frequency: 1.149583850646066e-5
allele num: 86988
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-23C>A
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5742
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14574
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6285
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3319
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9788
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11917
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1442
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 596
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 734
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1798
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2009
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3904
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4129
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5454
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2204
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3677
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1781
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 548
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 811
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 795
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11378
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6983
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10029
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1065
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7754
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 50836
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6510
  num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQ

6-32549638-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549638
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549638
    reference: chr 6
allele count: 0
allele frequency: 0.0e0
allele num: 86988
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-23C>G
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: intron
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 3319
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6285
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9788
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11917
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14574
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4108
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5742
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2009
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2204
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5454
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 548
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10029
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1781
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3677
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4129
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3904
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11378
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1442
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1798
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 596
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1065
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6983
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 734
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 795
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 811
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 5166
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9552
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 50836
  num of homozygotes: 0
population: East Asian
population: Other
population: African
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

6-32549639-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549639
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549639
    reference: chr 6
allele count: 1
allele frequency: 1.156764760318342e-5
allele num: 86448
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-24C>T
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4102
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9727
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14885
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12324
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6309
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5767
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3133
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6650
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12878
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4435
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 905
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4879
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 546
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 587
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2561
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4403
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7447
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1081
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2087
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1830
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2546
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1924
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2409
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1214
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 919
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7722
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 1
  allele frequency: 1.048657718120805e-4
  allele num: 9536
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 5112
  num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

6-32549639-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549639
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549639
    reference: chr 6
allele count: 1
allele frequency: 1.156764760318342e-5
allele num: 86448
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-24C>G
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5767
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12324
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14885
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3133
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6309
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4102
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9727
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2087
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4879
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 905
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12878
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 919
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4435
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2409
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1081
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1830
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4403
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1214
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6650
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2561
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 546
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7447
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2546
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1924
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 587
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6474
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 638
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7722
  num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

6-32549642-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549642
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549642
    reference: chr 6
allele count: 5
allele frequency: 5.801540889260187e-5
allele num: 86184
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-27A>T
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3067
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12540
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14780
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4041
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6852
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5450
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9599
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3496
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 6473
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 969
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 863
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7179
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2381
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4527
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2156
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1957
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1159
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4799
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2491
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 881
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12642
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2359
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4276
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 5
  allele frequency: 5.258729490954985e-4
  allele num: 9508
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6378
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6404
  num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

6-32549642-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549642
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549642
    reference: chr 6
allele count: 1837
allele frequency: 2.131486122714193e-2
allele num: 86184
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-27A>C
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 3.75e1
  variant carriers: 79
genotype depth: GenotypeDepth
  all individuals: 4041
  bin: 2.5e0
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 9599
  bin: 1.75e1
  variant carriers: 442
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 4.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5450
  bin: 2.75e1
  variant carriers: 221
genotype depth: GenotypeDepth
  all individuals: 14780
  bin: 1.25e1
  variant carriers: 471
genotype depth: GenotypeDepth
  all individuals: 12540
  bin: 7.5e0
  variant carriers: 246
genotype depth: GenotypeDepth
  all individuals: 6852
  bin: 2.25e1
  variant carriers: 295
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 5.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3067
  bin: 3.25e1
  variant carriers: 141
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 4.25e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1957
  bin: 4.25e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 6473
  bin: 3.25e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 4276
  bin: 2.75e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 5.75e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 2156
  bin: 1.25e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 2.5e0
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 8.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 2381
  bin: 6.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 4799
  bin: 3.75e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 2359
  bin: 1.75e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 863
  bin: 8.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 7179
  bin: 6.25e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 9.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 969
  bin: 5.25e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 1159
  bin: 7.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 12642
  bin: 2.25e1
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 4527
  bin: 7.5e0
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 2491
  bin: 4.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 3496
  bin: 9.75e1
  variant carriers: 1790
genotype quality: GenotypeQuality
  all individuals: 881
  bin: 7.25e1
  variant carriers: 8
num of homozygotes: 69
population: South Asian
  type: Population
  allele count: 737
  allele frequency: 7.751367269667649e-2
  allele num: 9508
  num of homozygotes: 52
population: European (Finnish)
  type: Population
  allele count: 50
  allele frequency: 9.780907668231613e-3
  allele num: 5112
  num of homozygotes: 1
population: Latino
  type: Population
  allele count: 101
  allele frequency: 1.583568516776419e-2
  allele num: 6378
  num of homozygotes: 3
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

6-32549643-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549643
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549643
    reference: chr 6
allele count: 8
allele frequency: 9.319664492078285e-5
allele num: 85840
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-28C>A
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9670
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14831
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4011
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12706
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7118
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5154
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2119
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1183
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2269
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6209
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5134
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2958
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6795
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 574
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 899
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4448
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1424
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1777
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 4548
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2307
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2868
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12538
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 893
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 642
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 50240
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6296
  num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD

6-32549645-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549645
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549645
    reference: chr 6
allele count: 0
allele frequency: 0.0e0
allele num: 85560
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-30C>T
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 5186
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14809
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12784
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2883
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7248
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9589
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3946
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4585
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2271
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1176
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6765
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2125
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12704
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2971
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 529
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 893
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2733
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2287
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5099
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4438
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6569
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 888
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1771
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1349
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6346
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7680
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6276
  num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum

6-32549645-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549645
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549645
    reference: chr 6
allele count: 1
allele frequency: 1.168770453482936e-5
allele num: 85560
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-30C>G
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 14809
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2883
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9589
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12784
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3946
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5186
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7248
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 888
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2271
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5099
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12704
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1771
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4585
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6569
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 529
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2287
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2125
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4438
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2971
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6765
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 893
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2733
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1349
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1176
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9456
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 5084
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7680
  num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP

6-32549646-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549646
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549646
    reference: chr 6
allele count: 1
allele frequency: 1.169098391320613e-5
allele num: 85536
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-31A>T
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12799
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14860
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7288
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9589
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5170
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3894
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2861
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2263
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5106
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3021
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1173
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4575
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2267
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1409
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6768
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2661
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6509
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4416
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12832
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 886
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2138
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1774
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 893
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7654
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6278
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 50112
  num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum

6-32549646-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549646
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549646
    reference: chr 6
allele count: 1
allele frequency: 1.169098391320613e-5
allele num: 85536
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-31A>G
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7288
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3894
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12799
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2861
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9589
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5170
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14860
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1173
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5106
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6768
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12832
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1409
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2661
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3021
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2263
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4416
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 893
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4575
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1774
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 6509
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 886
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2138
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2267
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6278
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6334
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 644
  num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/6-32549647-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549647
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549647
    reference: chr 6
allele count: 1
allele frequency: 1.175336733974284e-5
allele num: 85082
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-32G>T
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12846
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14846
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7350
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9679
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3843
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1486
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5076
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2820
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2160
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2218
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4538
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1774
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5154
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2290
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3022
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6786
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1821
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 885
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12476
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 885
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5752
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1169
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3146
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4430
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7630
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 5080
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9394
  num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

6-32549649-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549649
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549649
    reference: chr 6
allele count: 1
allele frequency: 1.223960245771217e-5
allele num: 81702
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-34C>T
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: intron
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 3102
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2565
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1705
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10245
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5217
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14553
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7386
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11655
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 939
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 768
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 595
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 691
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 703
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 601
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 937
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1059
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1279
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5604
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2031
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1439
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 593
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35653
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 985
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 794
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1111
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1685
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 720
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 669
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 2.095118374188142e-5
  allele num: 47730
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4956
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8712
  num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

6-32549649-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549649
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549649
    reference: chr 6
allele count: 37101
allele frequency: 4.541014907835794e-1
allele num: 81702
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-34C>A
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: intron
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.25e1
  variant carriers: 83
genotype depth: GenotypeDepth
  all individuals: 2565
  bin: 2.5e0
  variant carriers: 1284
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 5.25e1
  variant carriers: 230
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 4.75e1
  variant carriers: 464
genotype depth: GenotypeDepth
  all individuals: 11655
  bin: 1.75e1
  variant carriers: 8825
genotype depth: GenotypeDepth
  all individuals: 5217
  bin: 2.75e1
  variant carriers: 3658
genotype depth: GenotypeDepth
  all individuals: 3102
  bin: 3.25e1
  variant carriers: 2329
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 10245
  bin: 7.5e0
  variant carriers: 7461
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 4.25e1
  variant carriers: 755
genotype depth: GenotypeDepth
  all individuals: 7386
  bin: 2.25e1
  variant carriers: 5830
genotype depth: GenotypeDepth
  all individuals: 14553
  bin: 1.25e1
  variant carriers: 10928
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 5.75e1
  variant carriers: 177
genotype depth: GenotypeDepth
  all individuals: 1705
  bin: 3.75e1
  variant carriers: 1348
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.75e1
  variant carriers: 30
genotype quality: GenotypeQuality
  all individuals: 720
  bin: 7.75e1
  variant carriers: 469
genotype quality: GenotypeQuality
  all individuals: 2031
  bin: 2.25e1
  variant carriers: 498
genotype quality: GenotypeQuality
  all individuals: 939
  bin: 6.75e1
  variant carriers: 492
genotype quality: GenotypeQuality
  all individuals: 937
  bin: 1.25e1
  variant carriers: 445
genotype quality: GenotypeQuality
  all individuals: 703
  bin: 7.25e1
  variant carriers: 489
genotype quality: GenotypeQuality
  all individuals: 1111
  bin: 3.75e1
  variant carriers: 494
genotype quality: GenotypeQuality
  all individuals: 5604
  bin: 2.5e0
  variant carriers: 298
genotype quality: GenotypeQuality
  all individuals: 1279
  bin: 3.25e1
  variant carriers: 485
genotype quality: GenotypeQuality
  all individuals: 35653
  bin: 9.75e1
  variant carriers: 34806
genotype quality: GenotypeQuality
  all individuals: 669
  bin: 5.25e1
  variant carriers: 472
genotype quality: GenotypeQuality
  all individuals: 985
  bin: 1.75e1
  variant carriers: 567
genotype quality: GenotypeQuality
  all individuals: 1059
  bin: 2.75e1
  variant carriers: 458
genotype quality: GenotypeQuality
  all individuals: 1439
  bin: 7.5e0
  variant carriers: 410
genotype quality: GenotypeQuality
  all individuals: 794
  bin: 4.75e1
  variant carriers: 466
genotype quality: GenotypeQuality
  all individuals: 1685
  bin: 6.25e1
  variant carriers: 432
genotype quality: GenotypeQuality
  all individuals: 601
  bin: 5.75e1
  variant carriers: 465
genotype quality: GenotypeQuality
  all individuals: 768
  bin: 4.25e1
  variant carriers: 459
genotype quality: GenotypeQuality
  all individuals: 691
  bin: 8.25e1
  variant carriers: 473
genotype quality: GenotypeQuality
  all individuals: 593
  bin: 9.25e1
  variant carriers: 434
genotype quality: GenotypeQuality
  all individuals: 595
  bin: 8.75e1
  variant carriers: 470
num of homozygotes: 3013
population: European (Non-Finnish)
  type: Population
  allele count: 21851
  allele frequency: 4.578043159438508e-1
  allele num: 47730
  num of homozygotes: 1657
population: European (Finnish)
  type: Population
  allele count: 2163
  allele frequency: 4.364406779661017e-1
  allele num: 4956
  num of homozygotes: 186
population: East Asian
  type: Population
  allele count: 3138
  allele frequency: 5.209163346613546e-1
  allele num: 6024
  num of homozygotes: 391
population: Latino
population: African
population: South Asian
population: Other
reference allele: G
site quality: DP
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum

6-32549650-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549650
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549650
    reference: chr 6
allele count: 1
allele frequency: 1.095026390136002e-5
allele num: 91322
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-35C>T
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11540
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5175
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2956
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5828
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2650
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17834
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11618
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 826
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1799
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7558
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4963
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5679
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1307
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1975
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1064
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7356
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2605
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2355
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14398
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2453
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 896
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3161
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 757
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6936
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 10528
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8074
  num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

6-32549652-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549652
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549652
    reference: chr 6
allele count: 102
allele frequency: 1.139843103949221e-3
allele num: 89486
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-37T>A
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 12301
  bin: 1.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 5508
  bin: 2.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 2705
  bin: 3.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12069
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4979
  bin: 2.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 2671
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17388
  bin: 1.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 4.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2061
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 523
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 758
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 543
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1026
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4919
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2071
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1340
  bin: 5.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 7701
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 743
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6009
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5762
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3234
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3277
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2902
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 13276
  bin: 2.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1377
  bin: 9.75e1
  variant carriers: 83
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2200
  bin: 4.25e1
  variant carriers: 2
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 668
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 1.911095822344532e-5
  allele num: 52326
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6710
  num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: African
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

6-32549654-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549654
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549654
    reference: chr 6
allele count: 0
allele frequency: 0.0e0
allele num: 82094
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-39T>C
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: intron
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12285
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4920
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2698
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5602
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17366
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12203
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2615
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2633
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 676
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 913
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4494
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1187
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5415
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4148
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1833
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2220
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3812
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12520
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2793
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6938
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5768
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1388
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 680
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2119
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 618
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9654
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7584
  num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/6-32549654-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549654
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549653
    reference: chr 6
allele count: 201
allele frequency: 2.448412795088557e-3
allele num: 82094
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-40delG
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2615
  bin: 3.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 4.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 5602
  bin: 2.25e1
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 4920
  bin: 2.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 12285
  bin: 7.5e0
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17366
  bin: 1.25e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2698
  bin: 2.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 3.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12203
  bin: 1.75e1
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 676
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 5.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 2119
  bin: 4.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 2793
  bin: 4.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 12520
  bin: 2.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 2220
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6938
  bin: 3.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 2633
  bin: 1.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 5415
  bin: 3.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1833
  bin: 6.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 5768
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1187
  bin: 5.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 913
  bin: 7.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 3812
  bin: 7.5e0
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 4148
  bin: 2.5e0
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 680
  bin: 8.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 8.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1388
  bin: 9.75e1
  variant carriers: 150
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 9.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 4494
  bin: 2.75e1
  variant carriers: 8
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 10
  allele frequency: 1.673360107095047e-3
  allele num: 5976
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 9
  allele frequency: 1.558171745152355e-3
  allele num: 5776
  num of homozygotes: 0
population: African
  type: Population
  allele count: 9
  allele frequency: 1.186708860759494e-3
  allele num: 7584
  num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: AC
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD

6-32549662-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32549662
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 32549662
    reference: chr 6
allele count: 0
allele frequency: 0.0e0
allele num: 85674
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196126
  ensembl protein: ENSP00000353099
  ensembl transcript: ENST00000360004
  gene symbol: HLA-DRB1
  hgvsc: ENST00000360004.5:c.371-47T>A
  variant of: http://identifiers.org/hgnc/4948
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 13757
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16909
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
reference allele: A

African
type: Population
allele count: 305
allele frequency: 3.088920397002228e-2
allele num: 9874
num of homozygotes: 0

Latino
type: Population
allele count: 789
allele frequency: 7.179253867151957e-2
allele num: 10990
num of homozygotes: 0

South Asian
type: Population
allele count: 888
allele frequency: 5.564607093620755e-2
allele num: 15958
num of homozygotes: 0

Other
type: Population
allele count: 58
allele frequency: 6.666666666666667e-2
allele num: 870
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3808
allele frequency: 5.89090684075369e-2
allele num: 64642
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.115662e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.759999999999999e-2

MQ
type: SiteQuality
SIO_000300: 4.051e1

VQSLOD
type: SiteQuality
SIO_000300: 2.38e0

MQRankSum
type: SiteQuality
SIO_000300: 1.96e-1

FS
type: SiteQuality
SIO_000300: 2.058e0

QD
type: SiteQuality
SIO_000300: 1.41e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.92e-1

Other
type: Population
allele count: 30
allele frequency: 3.588516746411483e-2
allele num: 836
num of homozygotes: 0

South Asian
type: Population
allele count: 557
allele frequency: 3.704442670923118e-2
allele num: 15036
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 100
allele frequency: 1.65016501650165e-2
allele num: 6060
num of homozygotes: 0

Latino
type: Population
allele count: 160
allele frequency: 1.545595054095827e-2
allele num: 10352
num of homozygotes: 0

East Asian
type: Population
allele count: 247
allele frequency: 3.29597010942087e-2
allele num: 7494
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -5.388e0

MQRankSum
type: SiteQuality
SIO_000300: -1.467e0

FS
type: SiteQuality
SIO_000300: 6.262e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.07e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 6.7e-2

QD
type: SiteQuality
SIO_000300: 1.74e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.752e0

MQ
type: SiteQuality
SIO_000300: 4.044e1

DP
type: SiteQuality
SIO_000300: 5.100685e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.115e0

African
type: Population
allele count: 299
allele frequency: 3.061015561015561e-2
allele num: 9768
num of homozygotes: 0

Other
type: Population
allele count: 58
allele frequency: 6.712962962962964e-2
allele num: 864
num of homozygotes: 0

East Asian
type: Population
allele count: 376
allele frequency: 4.51163906887449e-2
allele num: 8334
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3805
allele frequency: 5.949216673441946e-2
allele num: 63958
num of homozygotes: 0

South Asian
type: Population
allele count: 888
allele frequency: 5.584905660377359e-2
allele num: 15900
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.9e-2

QD
type: SiteQuality
SIO_000300: 1.48e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.979e0

MQ
type: SiteQuality
SIO_000300: 4.049e1

FS
type: SiteQuality
SIO_000300: 1.011e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.39e-2

DP
type: SiteQuality
SIO_000300: 4.926499e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.34e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.36e0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6288
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8334
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10854
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.563526063979486e-5
allele num: 63958
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.36e0

FS
type: SiteQuality
SIO_000300: 1.011e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.39e-2

MQ
type: SiteQuality
SIO_000300: 4.049e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.979e0

DP
type: SiteQuality
SIO_000300: 4.926499e6

QD
type: SiteQuality
SIO_000300: 1.48e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.9e-2

African
type: Population
allele count: 274
allele frequency: 2.791929896066843e-2
allele num: 9814
num of homozygotes: 0

Latino
type: Population
allele count: 157
allele frequency: 1.378160112359551e-2
allele num: 11392
num of homozygotes: 0

Other
type: Population
allele count: 31
allele frequency: 3.436807095343681e-2
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 529
allele frequency: 3.261807867801209e-2
allele num: 16218
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 96
allele frequency: 1.476923076923077e-2
allele num: 6500
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.749e0

FS
type: SiteQuality
SIO_000300: 5.775e0

VQSLOD
type: SiteQuality
SIO_000300: -4.064e0

QD
type: SiteQuality
SIO_000300: 2.11e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.35e0

DP
type: SiteQuality
SIO_000300: 4.796815e6

MQRankSum
type: SiteQuality
SIO_000300: -1.956e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-2

MQ
type: SiteQuality
SIO_000300: 4.032e1

European (Non-Finnish)
type: Population
allele count: 16369
allele frequency: 2.787826146195245e-1
allele num: 58716
num of homozygotes: 1

Other
type: Population
allele count: 230
allele frequency: 2.75779376498801e-1
allele num: 834
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1272
allele frequency: 2.146473169085386e-1
allele num: 5926
num of homozygotes: 0

Latino
type: Population
allele count: 2209
allele frequency: 2.129772464327034e-1
allele num: 10372
num of homozygotes: 0

East Asian
type: Population
allele count: 1983
allele frequency: 2.695025822234303e-1
allele num: 7358
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 4.72e0

MQRankSum
type: SiteQuality
SIO_000300: -2.318e0

DP
type: SiteQuality
SIO_000300: 4.393323e6

VQSLOD
type: SiteQuality
SIO_000300: 3.916e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.786e-1

FS
type: SiteQuality
SIO_000300: 4.831e0

MQ
type: SiteQuality
SIO_000300: 4.069e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.52e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.2e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.081e0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502990951994469e-5
allele num: 66534
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.592e0

DP
type: SiteQuality
SIO_000300: 3.770645e6

MQ
type: SiteQuality
SIO_000300: 4.071e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.38e-2

QD
type: SiteQuality
SIO_000300: 3.326e1

VQSLOD
type: SiteQuality
SIO_000300: -1.545e0

FS
type: SiteQuality
SIO_000300: 6.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.89e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.3e0

European (Finnish)
type: Population
allele count: 5672
allele frequency: 8.599151000606429e-1
allele num: 6596
num of homozygotes: 2439

African
type: Population
allele count: 8331
allele frequency: 8.418552950687146e-1
allele num: 9896
num of homozygotes: 3512

Latino
type: Population
allele count: 10353
allele frequency: 8.972958918356734e-1
allele num: 11538
num of homozygotes: 4639

South Asian
type: Population
allele count: 12915
allele frequency: 7.830120043652237e-1
allele num: 16494
num of homozygotes: 5080

Other
type: Population
allele count: 749
allele frequency: 8.267108167770419e-1
allele num: 906
num of homozygotes: 309

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.38e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.545e0

MQ
type: SiteQuality
SIO_000300: 4.071e1

QD
type: SiteQuality
SIO_000300: 3.326e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.3e0

FS
type: SiteQuality
SIO_000300: 6.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.89e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.592e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.78e-1

DP
type: SiteQuality
SIO_000300: 3.770645e6

African
type: Population
allele count: 1
allele frequency: 1.023331968890708e-4
allele num: 9772
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16446
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.3e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.059e0

VQSLOD
type: SiteQuality
SIO_000300: -3.057e0

FS
type: SiteQuality
SIO_000300: 2.669e0

DP
type: SiteQuality
SIO_000300: 2.844051e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e0

MQ
type: SiteQuality
SIO_000300: 3.957e1

QD
type: SiteQuality
SIO_000300: 4.14e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.86e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16220
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11448
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517727051966974e-5
allele num: 65888
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.93e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 3.724e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

DP
type: SiteQuality
SIO_000300: 2.7482e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.86e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.074e0

VQSLOD
type: SiteQuality
SIO_000300: -2.328e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.18e-1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11376
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15988
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.47e0

QD
type: SiteQuality
SIO_000300: 6.36e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.14e-1

FS
type: SiteQuality
SIO_000300: 2.886e0

VQSLOD
type: SiteQuality
SIO_000300: -2.863e0

MQRankSum
type: SiteQuality
SIO_000300: -7.4e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 3.897e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

DP
type: SiteQuality
SIO_000300: 2.712613e6

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15720
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8528
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.538935056940597e-5
allele num: 64980
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11262
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.2e-3

MQRankSum
type: SiteQuality
SIO_000300: -4.11e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.975e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.674e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.62e-1

DP
type: SiteQuality
SIO_000300: 2.695762e6

MQ
type: SiteQuality
SIO_000300: 4.156e1

QD
type: SiteQuality
SIO_000300: 1.0e0

FS
type: SiteQuality
SIO_000300: 8.089e0

South Asian
type: Population
allele count: 239
allele frequency: 1.724137931034483e-2
allele num: 13862
num of homozygotes: 0

Other
type: Population
allele count: 16
allele frequency: 2.030456852791878e-2
allele num: 788
num of homozygotes: 0

East Asian
type: Population
allele count: 218
allele frequency: 2.913659449345095e-2
allele num: 7482
num of homozygotes: 0

African
type: Population
allele count: 191
allele frequency: 2.316836487142164e-2
allele num: 8244
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 93
allele frequency: 1.582170806396734e-2
allele num: 5878
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.21e0

MQRankSum
type: SiteQuality
SIO_000300: -2.083e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.08e-1

FS
type: SiteQuality
SIO_000300: 9.129e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.189e-1

QD
type: SiteQuality
SIO_000300: 8.32e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.04e0

MQ
type: SiteQuality
SIO_000300: 3.962e1

DP
type: SiteQuality
SIO_000300: 2.57475e6

Latino
type: Population
allele count: 1193
allele frequency: 1.209939148073022e-1
allele num: 9860
num of homozygotes: 0

African
type: Population
allele count: 1756
allele frequency: 2.130033964095099e-1
allele num: 8244
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 713
allele frequency: 1.212997618237496e-1
allele num: 5878
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9510
allele frequency: 1.635763184148062e-1
allele num: 58138
num of homozygotes: 1

East Asian
type: Population
allele count: 1188
allele frequency: 1.587810745789896e-1
allele num: 7482
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.962e1

DP
type: SiteQuality
SIO_000300: 2.57475e6

MQRankSum
type: SiteQuality
SIO_000300: -2.083e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.04e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.189e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.08e-1

FS
type: SiteQuality
SIO_000300: 9.129e0

QD
type: SiteQuality
SIO_000300: 8.32e0

VQSLOD
type: SiteQuality
SIO_000300: 1.21e0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7952
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59802
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9840
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8410
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6040
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.56e0

MQ
type: SiteQuality
SIO_000300: 5.499e1

QD
type: SiteQuality
SIO_000300: 2.741e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.94e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.94e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.103e0

DP
type: SiteQuality
SIO_000300: 2.424602e6

ClippingRankSum
type: SiteQuality
SIO_000300: 8.090000000000001e-1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8372
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6014
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7912
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9762
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.22e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.79e-1

QD
type: SiteQuality
SIO_000300: 1.382e1

VQSLOD
type: SiteQuality
SIO_000300: -2.484e0

MQ
type: SiteQuality
SIO_000300: 3.497e1

FS
type: SiteQuality
SIO_000300: 5.499e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.348e0

DP
type: SiteQuality
SIO_000300: 2.422302e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -7.06e-1

European (Non-Finnish)
type: Population
allele count: 31151
allele frequency: 4.976675080678659e-1
allele num: 62594
num of homozygotes: 5481

Other
type: Population
allele count: 425
allele frequency: 4.953379953379953e-1
allele num: 858
num of homozygotes: 68

South Asian
type: Population
allele count: 7405
allele frequency: 4.95715624581604e-1
allele num: 14938
num of homozygotes: 1538

European (Finnish)
type: Population
allele count: 2828
allele frequency: 4.497455470737913e-1
allele num: 6288
num of homozygotes: 395

Latino
type: Population
allele count: 5593
allele frequency: 5.225149476831091e-1
allele num: 10704
num of homozygotes: 924

QD
type: SiteQuality
SIO_000300: 2.835e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.034e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.48e-1

FS
type: SiteQuality
SIO_000300: 7.3e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.571e0

VQSLOD
type: SiteQuality
SIO_000300: 1.29e0

MQ
type: SiteQuality
SIO_000300: 3.974e1

DP
type: SiteQuality
SIO_000300: 2.341224e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.26e-1

European (Finnish)
type: Population
allele count: 1110
allele frequency: 1.765267175572519e-1
allele num: 6288
num of homozygotes: 110

South Asian
type: Population
allele count: 284
allele frequency: 1.901191591913241e-2
allele num: 14938
num of homozygotes: 6

Other
type: Population
allele count: 78
allele frequency: 9.090909090909091e-2
allele num: 858
num of homozygotes: 5

Latino
type: Population
allele count: 654
allele frequency: 6.109865470852018e-2
allele num: 10704
num of homozygotes: 24

African
type: Population
allele count: 595
allele frequency: 6.380012867252842e-2
allele num: 9326
num of homozygotes: 24

DP
type: SiteQuality
SIO_000300: 2.341224e6

VQSLOD
type: SiteQuality
SIO_000300: 1.29e0

MQ
type: SiteQuality
SIO_000300: 3.974e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.26e-1

FS
type: SiteQuality
SIO_000300: 7.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.034e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.48e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.94e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.571e0

QD
type: SiteQuality
SIO_000300: 2.835e1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.717209877391215e-5
allele num: 58234
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9364
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13226
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8198
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7740
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 4.51e1

DP
type: SiteQuality
SIO_000300: 1.99475e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.44e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.62e-1

QD
type: SiteQuality
SIO_000300: 1.094e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.12e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.56e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.44e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.051e0

Latino
type: Population
allele count: 721
allele frequency: 8.086585912965455e-2
allele num: 8916
num of homozygotes: 22

European (Non-Finnish)
type: Population
allele count: 6584
allele frequency: 1.157443217776528e-1
allele num: 56884
num of homozygotes: 272

Other
type: Population
allele count: 80
allele frequency: 1.098901098901099e-1
allele num: 728
num of homozygotes: 4

European (Finnish)
type: Population
allele count: 1210
allele frequency: 2.061328790459966e-1
allele num: 5870
num of homozygotes: 105

South Asian
type: Population
allele count: 284
allele frequency: 2.25218080888184e-2
allele num: 12610
num of homozygotes: 4

DP
type: SiteQuality
SIO_000300: 1.943697e6

VQSLOD
type: SiteQuality
SIO_000300: -5.762e0

MQRankSum
type: SiteQuality
SIO_000300: -2.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.55e-1

FS
type: SiteQuality
SIO_000300: 2.937e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e0

QD
type: SiteQuality
SIO_000300: 1.42e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.37e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.96e0

MQ
type: SiteQuality
SIO_000300: 3.657e1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56884
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5870
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.121579183490354e-4
allele num: 8916
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7880
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12610
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.937e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.96e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.37e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.0e0

DP
type: SiteQuality
SIO_000300: 1.943697e6

QD
type: SiteQuality
SIO_000300: 1.42e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.55e-1

MQ
type: SiteQuality
SIO_000300: 3.657e1

VQSLOD
type: SiteQuality
SIO_000300: -5.762e0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7490
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8916
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5870
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.930214115781126e-5
allele num: 12610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.757963574994726e-5
allele num: 56884
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.55e-1

MQ
type: SiteQuality
SIO_000300: 3.657e1

FS
type: SiteQuality
SIO_000300: 2.937e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.96e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.37e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e0

VQSLOD
type: SiteQuality
SIO_000300: -5.762e0

QD
type: SiteQuality
SIO_000300: 1.42e1

DP
type: SiteQuality
SIO_000300: 1.943697e6

South Asian
type: Population
allele count: 1198
allele frequency: 1.006215353603225e-1
allele num: 11906
num of homozygotes: 77

East Asian
type: Population
allele count: 315
allele frequency: 4.42788867022772e-2
allele num: 7114
num of homozygotes: 8

Latino
type: Population
allele count: 834
allele frequency: 1.024318349299926e-1
allele num: 8142
num of homozygotes: 37

European (Finnish)
type: Population
allele count: 1254
allele frequency: 2.234497505345688e-1
allele num: 5612
num of homozygotes: 116

African
type: Population
allele count: 842
allele frequency: 1.136609071274298e-1
allele num: 7408
num of homozygotes: 35

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.49e0

DP
type: SiteQuality
SIO_000300: 1.896986e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.79e0

MQRankSum
type: SiteQuality
SIO_000300: -1.773e0

VQSLOD
type: SiteQuality
SIO_000300: -3.464e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.92e-2

FS
type: SiteQuality
SIO_000300: 1.7045e1

QD
type: SiteQuality
SIO_000300: 1.587e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.37e-1

MQ
type: SiteQuality
SIO_000300: 3.72e1

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.703840882995666e-5
allele num: 53998
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7114
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 688
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.399126490844952e-5
allele num: 11906
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.37e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.49e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.79e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.92e-2

DP
type: SiteQuality
SIO_000300: 1.896986e6

VQSLOD
type: SiteQuality
SIO_000300: -3.464e0

FS
type: SiteQuality
SIO_000300: 1.7045e1

QD
type: SiteQuality
SIO_000300: 1.587e1

MQRankSum
type: SiteQuality
SIO_000300: -1.773e0

MQ
type: SiteQuality
SIO_000300: 3.72e1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44980
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4606
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.641342074816814e-5
allele num: 10372
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6034
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5920
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.11e-2

FS
type: SiteQuality
SIO_000300: 6.021e0

DP
type: SiteQuality
SIO_000300: 1.753582e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.06e-1

QD
type: SiteQuality
SIO_000300: 2.737e1

MQRankSum
type: SiteQuality
SIO_000300: -1.051e0

MQ
type: SiteQuality
SIO_000300: 3.911e1

VQSLOD
type: SiteQuality
SIO_000300: -2.101e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.25e-1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6318
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5980
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.68429207824908e-5
allele num: 10326
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 594
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.15e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.43e-1

DP
type: SiteQuality
SIO_000300: 1.747506e6

MQ
type: SiteQuality
SIO_000300: 5.158e1

FS
type: SiteQuality
SIO_000300: 1.154e0

MQRankSum
type: SiteQuality
SIO_000300: -1.448e0

QD
type: SiteQuality
SIO_000300: 4.52e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.14e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -9.2e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.553e0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5980
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.708817498291183e-4
allele num: 5852
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.487121959974872e-5
allele num: 44572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10326
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 594
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.2e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.448e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.14e-2

MQ
type: SiteQuality
SIO_000300: 5.158e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.15e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.553e0

QD
type: SiteQuality
SIO_000300: 4.52e0

FS
type: SiteQuality
SIO_000300: 1.154e0

DP
type: SiteQuality
SIO_000300: 1.747506e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.43e-1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4088
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5350
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5192
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.515723270440252e-5
allele num: 39750
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.769e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.369e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.69e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.113e0

DP
type: SiteQuality
SIO_000300: 1.676744e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

QD
type: SiteQuality
SIO_000300: 3.192e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 482
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.143902997025852e-4
allele num: 8742
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.15610176800345e-4
allele num: 4638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34984
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.136e0

MQRankSum
type: SiteQuality
SIO_000300: -1.24e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.261e0

MQ
type: SiteQuality
SIO_000300: 3.678e1

QD
type: SiteQuality
SIO_000300: 1.586e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.43e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.536e0

DP
type: SiteQuality
SIO_000300: 1.598368e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.48e-1

Latino
type: Population
allele count: 1315
allele frequency: 2.354099534550662e-1
allele num: 5586
num of homozygotes: 0

Other
type: Population
allele count: 80
allele frequency: 1.438848920863309e-1
allele num: 556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 618
allele frequency: 1.548096192384769e-1
allele num: 3992
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6950
allele frequency: 1.769168109153854e-1
allele num: 39284
num of homozygotes: 0

South Asian
type: Population
allele count: 938
allele frequency: 1.016691957511381e-1
allele num: 9226
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.783e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.62e0

FS
type: SiteQuality
SIO_000300: 2.04e1

QD
type: SiteQuality
SIO_000300: 1.01e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.67e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.858e0

MQRankSum
type: SiteQuality
SIO_000300: -1.944e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.950000000000001e-2

DP
type: SiteQuality
SIO_000300: 1.549529e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.722e0

Latino
type: Population
allele count: 37
allele frequency: 6.623702112423917e-3
allele num: 5586
num of homozygotes: 0

East Asian
type: Population
allele count: 199
allele frequency: 3.834296724470135e-2
allele num: 5190
num of homozygotes: 0

African
type: Population
allele count: 188
allele frequency: 3.61260568793236e-2
allele num: 5204
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 658
allele frequency: 1.674982181040627e-2
allele num: 39284
num of homozygotes: 0

Other
type: Population
allele count: 12
allele frequency: 2.158273381294964e-2
allele num: 556
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.783e1

FS
type: SiteQuality
SIO_000300: 2.04e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.67e-1

QD
type: SiteQuality
SIO_000300: 1.01e1

MQRankSum
type: SiteQuality
SIO_000300: -1.944e0

DP
type: SiteQuality
SIO_000300: 1.549529e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.62e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.950000000000001e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.858e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.722e0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7878
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3126
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 434
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3736
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.384323812102342e-5
allele num: 29548
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.44113e6

FS
type: SiteQuality
SIO_000300: 2.823e0

VQSLOD
type: SiteQuality
SIO_000300: 4.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.303e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.29e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.042e0

MQ
type: SiteQuality
SIO_000300: 4.215e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

QD
type: SiteQuality
SIO_000300: 1.201e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.71e-1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8002
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 422
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.9e-1

FS
type: SiteQuality
SIO_000300: 1.3271e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.99e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.52e-1

QD
type: SiteQuality
SIO_000300: 9.18e0

MQ
type: SiteQuality
SIO_000300: 3.747e1

VQSLOD
type: SiteQuality
SIO_000300: 7.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.96e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.381e0

DP
type: SiteQuality
SIO_000300: 1.394608e6

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 422
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4182
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 6.998880179171333e-5
allele num: 28576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3580
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3202
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.394608e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.9e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.96e-1

QD
type: SiteQuality
SIO_000300: 9.18e0

FS
type: SiteQuality
SIO_000300: 1.3271e1

VQSLOD
type: SiteQuality
SIO_000300: 7.04e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.381e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.99e-2

MQ
type: SiteQuality
SIO_000300: 3.747e1

Other
type: Population
allele count: 16
allele frequency: 3.791469194312796e-2
allele num: 422
num of homozygotes: 0

African
type: Population
allele count: 277
allele frequency: 6.62362505978001e-2
allele num: 4182
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 113
allele frequency: 3.807277628032345e-2
allele num: 2968
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1655
allele frequency: 5.791573348264278e-2
allele num: 28576
num of homozygotes: 0

South Asian
type: Population
allele count: 367
allele frequency: 4.586353411647088e-2
allele num: 8002
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.747e1

FS
type: SiteQuality
SIO_000300: 1.3271e1

VQSLOD
type: SiteQuality
SIO_000300: 7.04e-1

QD
type: SiteQuality
SIO_000300: 9.18e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.99e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.9e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.52e-1

DP
type: SiteQuality
SIO_000300: 1.394608e6

MQRankSum
type: SiteQuality
SIO_000300: -1.381e0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 24778
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 3.543586109142452e-4
allele num: 2822
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2732
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3530
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.729999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -6.682e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.34e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.302e0

DP
type: SiteQuality
SIO_000300: 1.387584e6

MQ
type: SiteQuality
SIO_000300: 4.177e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.085e0

QD
type: SiteQuality
SIO_000300: 3.201e1

European (Non-Finnish)
type: Population
allele count: 952
allele frequency: 3.303032405801124e-2
allele num: 28822
num of homozygotes: 2

Other
type: Population
allele count: 6
allele frequency: 1.470588235294118e-2
allele num: 408
num of homozygotes: 0

South Asian
type: Population
allele count: 46
allele frequency: 5.923255215039918e-3
allele num: 7766
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 85
allele frequency: 2.922971114167813e-2
allele num: 2908
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.64e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.49e0

VQSLOD
type: SiteQuality
SIO_000300: -6.466e-1

QD
type: SiteQuality
SIO_000300: 4.23e0

DP
type: SiteQuality
SIO_000300: 1.375983e6

FS
type: SiteQuality
SIO_000300: 1.5749e1

MQ
type: SiteQuality
SIO_000300: 3.721e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 6.939143709666228e-5
allele num: 28822
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4264
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 408
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.64e-2

VQSLOD
type: SiteQuality
SIO_000300: -6.466e-1

DP
type: SiteQuality
SIO_000300: 1.375983e6

MQ
type: SiteQuality
SIO_000300: 3.721e1

MQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.49e0

QD
type: SiteQuality
SIO_000300: 4.23e0

FS
type: SiteQuality
SIO_000300: 1.5749e1

East Asian
type: Population
allele count: 2804
allele frequency: 4.274390243902439e-1
allele num: 6560
num of homozygotes: 72

South Asian
type: Population
allele count: 2412
allele frequency: 2.48659793814433e-1
allele num: 9700
num of homozygotes: 29

Other
type: Population
allele count: 220
allele frequency: 3.666666666666666e-1
allele num: 600
num of homozygotes: 1

Latino
type: Population
allele count: 3121
allele frequency: 4.278859336440911e-1
allele num: 7294
num of homozygotes: 127

QD
type: SiteQuality
SIO_000300: 2.875e1

VQSLOD
type: SiteQuality
SIO_000300: 1.67e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.597e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.7e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.167e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.46e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.1e-1

FS
type: SiteQuality
SIO_000300: 1.4712e1

DP
type: SiteQuality
SIO_000300: 1.285304e6

MQ
type: SiteQuality
SIO_000300: 3.541e1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.050020500205002e-4
allele num: 4878
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 1.002164675699511e-4
allele num: 49892
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9700
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.875e1

MQ
type: SiteQuality
SIO_000300: 3.541e1

DP
type: SiteQuality
SIO_000300: 1.285304e6

VQSLOD
type: SiteQuality
SIO_000300: 1.67e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.597e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.167e0

FS
type: SiteQuality
SIO_000300: 1.4712e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.46e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.1e-1

South Asian
type: Population
allele count: 237
allele frequency: 3.961885656970913e-2
allele num: 5982
num of homozygotes: 9

Latino
type: Population
allele count: 595
allele frequency: 1.861702127659574e-1
allele num: 3196
num of homozygotes: 32

European (Non-Finnish)
type: Population
allele count: 5849
allele frequency: 1.944481382978723e-1
allele num: 30080
num of homozygotes: 329

Other
type: Population
allele count: 76
allele frequency: 2.134831460674157e-1
allele num: 356
num of homozygotes: 6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.02e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 7.78782e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.459999999999999e-2

FS
type: SiteQuality
SIO_000300: 8.775e0

VQSLOD
type: SiteQuality
SIO_000300: -9.024e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.46e-1

MQ
type: SiteQuality
SIO_000300: 3.417e1

QD
type: SiteQuality
SIO_000300: 2.372e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.91e-1

European (Non-Finnish)
type: Population
allele count: 6565
allele frequency: 2.18251329787234e-1
allele num: 30080
num of homozygotes: 5

European (Finnish)
type: Population
allele count: 476
allele frequency: 1.417510422870756e-1
allele num: 3358
num of homozygotes: 0

South Asian
type: Population
allele count: 842
allele frequency: 1.407556001337345e-1
allele num: 5982
num of homozygotes: 4

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.459999999999999e-2

DP
type: SiteQuality
SIO_000300: 7.78782e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.91e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.02e0

FS
type: SiteQuality
SIO_000300: 8.775e0

QD
type: SiteQuality
SIO_000300: 2.372e1

VQSLOD
type: SiteQuality
SIO_000300: -9.024e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.46e-1

MQ
type: SiteQuality
SIO_000300: 3.417e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3358
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2846
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30080
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.417e1

DP
type: SiteQuality
SIO_000300: 7.78782e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.91e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.459999999999999e-2

FS
type: SiteQuality
SIO_000300: 8.775e0

VQSLOD
type: SiteQuality
SIO_000300: -9.024e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.02e0

QD
type: SiteQuality
SIO_000300: 2.372e1

MQRankSum
type: SiteQuality
SIO_000300: -8.46e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 356
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 3.324468085106383e-4
allele num: 30080
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 9.386733416770963e-4
allele num: 3196
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.46e-1

MQ
type: SiteQuality
SIO_000300: 3.417e1

DP
type: SiteQuality
SIO_000300: 7.78782e5

FS
type: SiteQuality
SIO_000300: 8.775e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.459999999999999e-2

VQSLOD
type: SiteQuality
SIO_000300: -9.024e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.02e0

QD
type: SiteQuality
SIO_000300: 2.372e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.91e-1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4804
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 5.015045135406219e-4
allele num: 5982
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 356
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.977963073257892e-4
allele num: 3358
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.459999999999999e-2

MQ
type: SiteQuality
SIO_000300: 3.417e1

VQSLOD
type: SiteQuality
SIO_000300: -9.024e-1

QD
type: SiteQuality
SIO_000300: 2.372e1

DP
type: SiteQuality
SIO_000300: 7.78782e5

FS
type: SiteQuality
SIO_000300: 8.775e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.91e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.46e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.02e0

South Asian
type: Population
allele count: 1721
allele frequency: 2.970314118053158e-1
allele num: 5794
num of homozygotes: 55

Other
type: Population
allele count: 193
allele frequency: 4.447004608294931e-1
allele num: 434
num of homozygotes: 11

European (Finnish)
type: Population
allele count: 1793
allele frequency: 4.912328767123288e-1
allele num: 3650
num of homozygotes: 161

European (Non-Finnish)
type: Population
allele count: 14408
allele frequency: 4.505315822388993e-1
allele num: 31980
num of homozygotes: 597

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.836e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.13e0

MQRankSum
type: SiteQuality
SIO_000300: 4.0e-1

MQ
type: SiteQuality
SIO_000300: 3.543e1

VQSLOD
type: SiteQuality
SIO_000300: 4.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.177e0

FS
type: SiteQuality
SIO_000300: 1.7908e1

QD
type: SiteQuality
SIO_000300: 2.007e1

DP
type: SiteQuality
SIO_000300: 7.76376e5

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5794
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 31980
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.73972602739726e-4
allele num: 3650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3304
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.177e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.836e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.13e0

MQRankSum
type: SiteQuality
SIO_000300: 4.0e-1

FS
type: SiteQuality
SIO_000300: 1.7908e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.6e-2

DP
type: SiteQuality
SIO_000300: 7.76376e5

MQ
type: SiteQuality
SIO_000300: 3.543e1

VQSLOD
type: SiteQuality
SIO_000300: 4.8e-1

QD
type: SiteQuality
SIO_000300: 2.007e1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 674
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1074
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3852
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.599e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -4.56e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.36e-1

QD
type: SiteQuality
SIO_000300: 2.295e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.992e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

DP
type: SiteQuality
SIO_000300: 1.237896e6

VQSLOD
type: SiteQuality
SIO_000300: 7.98e0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 582
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5782
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9192
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6120
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.1294e1

MQRankSum
type: SiteQuality
SIO_000300: -5.73e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.59e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.44e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.08e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.1e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.1e-2

MQ
type: SiteQuality
SIO_000300: 3.647e1

QD
type: SiteQuality
SIO_000300: 4.79e0

DP
type: SiteQuality
SIO_000300: 1.224303e6

European (Finnish)
type: Population
allele count: 77
allele frequency: 1.629284807448159e-2
allele num: 4726
num of homozygotes: 0

Latino
type: Population
allele count: 64
allele frequency: 1.045751633986928e-2
allele num: 6120
num of homozygotes: 0

African
type: Population
allele count: 118
allele frequency: 1.782477341389728e-2
allele num: 6620
num of homozygotes: 1

Other
type: Population
allele count: 6
allele frequency: 1.030927835051546e-2
allele num: 582
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.224303e6

VQSLOD
type: SiteQuality
SIO_000300: 1.08e0

MQ
type: SiteQuality
SIO_000300: 3.647e1

MQRankSum
type: SiteQuality
SIO_000300: -5.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.1e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.1e-2

QD
type: SiteQuality
SIO_000300: 4.79e0

FS
type: SiteQuality
SIO_000300: 1.1294e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.59e-2

European (Finnish)
type: Population
allele count: 1509
allele frequency: 2.93579766536965e-1
allele num: 5140
num of homozygotes: 129

East Asian
type: Population
allele count: 1102
allele frequency: 1.685530743346589e-1
allele num: 6538
num of homozygotes: 7

African
type: Population
allele count: 1004
allele frequency: 1.322096391888333e-1
allele num: 7594
num of homozygotes: 28

South Asian
type: Population
allele count: 909
allele frequency: 9.878287328841556e-2
allele num: 9202
num of homozygotes: 10

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.17e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.779e-1

FS
type: SiteQuality
SIO_000300: 1.066e0

MQRankSum
type: SiteQuality
SIO_000300: -2.899e0

DP
type: SiteQuality
SIO_000300: 1.18399e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.04e0

MQ
type: SiteQuality
SIO_000300: 3.437e1

QD
type: SiteQuality
SIO_000300: 2.853e1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7594
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50734
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9202
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.96e-1

DP
type: SiteQuality
SIO_000300: 1.18399e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.779e-1

FS
type: SiteQuality
SIO_000300: 1.066e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.04e0

MQRankSum
type: SiteQuality
SIO_000300: -2.899e0

QD
type: SiteQuality
SIO_000300: 2.853e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.33e-1

MQ
type: SiteQuality
SIO_000300: 3.437e1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7594
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5140
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 634
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.17e-1

QD
type: SiteQuality
SIO_000300: 2.853e1

VQSLOD
type: SiteQuality
SIO_000300: 1.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.04e0

FS
type: SiteQuality
SIO_000300: 1.066e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.779e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.899e0

MQ
type: SiteQuality
SIO_000300: 3.437e1

DP
type: SiteQuality
SIO_000300: 1.18399e6

African
type: Population
allele count: 4555
allele frequency: 5.99815643929418e-1
allele num: 7594
num of homozygotes: 1213

European (Finnish)
type: Population
allele count: 2308
allele frequency: 4.490272373540856e-1
allele num: 5140
num of homozygotes: 370

Latino
type: Population
allele count: 3791
allele frequency: 5.306550951847704e-1
allele num: 7144
num of homozygotes: 731

Other
type: Population
allele count: 310
allele frequency: 4.889589905362776e-1
allele num: 634
num of homozygotes: 54

BaseQRankSum
type: SiteQuality
SIO_000300: 2.04e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.779e-1

DP
type: SiteQuality
SIO_000300: 1.18399e6

FS
type: SiteQuality
SIO_000300: 1.066e0

MQ
type: SiteQuality
SIO_000300: 3.437e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.33e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.899e0

QD
type: SiteQuality
SIO_000300: 2.853e1

VQSLOD
type: SiteQuality
SIO_000300: 1.96e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.17e-1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7816
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.029230135858378e-4
allele num: 9716
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6788
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.506e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.179999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.268e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.3e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.531e0

QD
type: SiteQuality
SIO_000300: 8.69e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -8.22e-1

DP
type: SiteQuality
SIO_000300: 1.070618e6

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7828
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.026904908605463e-4
allele num: 9738
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51548
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-2

VQSLOD
type: SiteQuality
SIO_000300: -3.367e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.448e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.5e0

QD
type: SiteQuality
SIO_000300: 2.93e0

MQRankSum
type: SiteQuality
SIO_000300: -4.93e-1

DP
type: SiteQuality
SIO_000300: 1.071821e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 3.582e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.68e-1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8830
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5750
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.215919163268924e-5
allele num: 45128
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.066606e6

FS
type: SiteQuality
SIO_000300: 2.86e0

MQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.159e0

VQSLOD
type: SiteQuality
SIO_000300: -1.951e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.389999999999999e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.4e-2

QD
type: SiteQuality
SIO_000300: 1.755e1

MQ
type: SiteQuality
SIO_000300: 3.28e1

Latino
type: Population
allele count: 922
allele frequency: 1.596260387811634e-1
allele num: 5776
num of homozygotes: 5

African
type: Population
allele count: 630
allele frequency: 8.784160624651423e-2
allele num: 7172
num of homozygotes: 0

Other
type: Population
allele count: 81
allele frequency: 1.382252559726962e-1
allele num: 586
num of homozygotes: 0

East Asian
type: Population
allele count: 1078
allele frequency: 1.874782608695652e-1
allele num: 5750
num of homozygotes: 2

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.389999999999999e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.951e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.4e-2

DP
type: SiteQuality
SIO_000300: 1.066606e6

MQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 2.86e0

MQ
type: SiteQuality
SIO_000300: 3.28e1

QD
type: SiteQuality
SIO_000300: 1.755e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.159e0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9616
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7768
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.966955153422502e-5
allele num: 50840
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6516
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.08e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.316e1

QD
type: SiteQuality
SIO_000300: 2.461e1

MQRankSum
type: SiteQuality
SIO_000300: -1.34e-1

DP
type: SiteQuality
SIO_000300: 1.028916e6

VQSLOD
type: SiteQuality
SIO_000300: -4.917e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.47e-1

Other
type: Population
allele count: 77
allele frequency: 1.203125e-1
allele num: 640
num of homozygotes: 6

East Asian
type: Population
allele count: 168
allele frequency: 2.580645161290323e-2
allele num: 6510
num of homozygotes: 6

European (Finnish)
type: Population
allele count: 1124
allele frequency: 2.175764614789005e-1
allele num: 5166
num of homozygotes: 125

European (Non-Finnish)
type: Population
allele count: 6016
allele frequency: 1.183413329136832e-1
allele num: 50836
num of homozygotes: 339

VQSLOD
type: SiteQuality
SIO_000300: -1.394e0

FS
type: SiteQuality
SIO_000300: 1.9425e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.23e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.82e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e-1

MQ
type: SiteQuality
SIO_000300: 3.643e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.98e-1

QD
type: SiteQuality
SIO_000300: 2.318e1

DP
type: SiteQuality
SIO_000300: 1.033447e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.450000000000001e-2

Latino
type: Population
allele count: 1
allele frequency: 1.531393568147014e-4
allele num: 6530
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5166
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 640
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9552
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.9425e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.450000000000001e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.394e0

MQRankSum
type: SiteQuality
SIO_000300: -1.82e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.23e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.98e-1

DP
type: SiteQuality
SIO_000300: 1.033447e6

QD
type: SiteQuality
SIO_000300: 2.318e1

MQ
type: SiteQuality
SIO_000300: 3.643e1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 640
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7754
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6530
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.450000000000001e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.23e-1

FS
type: SiteQuality
SIO_000300: 1.9425e1

MQRankSum
type: SiteQuality
SIO_000300: -1.82e-1

MQ
type: SiteQuality
SIO_000300: 3.643e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.98e-1

DP
type: SiteQuality
SIO_000300: 1.033447e6

VQSLOD
type: SiteQuality
SIO_000300: -1.394e0

QD
type: SiteQuality
SIO_000300: 2.318e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e-1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6474
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 638
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6418
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.011698e6

VQSLOD
type: SiteQuality
SIO_000300: -2.373e0

MQRankSum
type: SiteQuality
SIO_000300: -3.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.99e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.13e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 3.342e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.61e-2

QD
type: SiteQuality
SIO_000300: 3.481e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5112
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6418
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9536
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.978317638680066e-5
allele num: 50548
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.373e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.61e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -6.99e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.13e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 3.342e1

MQRankSum
type: SiteQuality
SIO_000300: -3.48e-1

DP
type: SiteQuality
SIO_000300: 1.011698e6

QD
type: SiteQuality
SIO_000300: 3.481e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.51e-1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5112
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 638
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7718
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50426
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.78e-1

MQ
type: SiteQuality
SIO_000300: 4.258e1

MQRankSum
type: SiteQuality
SIO_000300: 5.73e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.33e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.51e-1

QD
type: SiteQuality
SIO_000300: 2.397e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.140000000000001e-2

DP
type: SiteQuality
SIO_000300: 1.010885e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.1e-1

European (Non-Finnish)
type: Population
allele count: 603
allele frequency: 1.195811684448499e-2
allele num: 50426
num of homozygotes: 9

African
type: Population
allele count: 201
allele frequency: 2.604301632547292e-2
allele num: 7718
num of homozygotes: 1

Other
type: Population
allele count: 12
allele frequency: 1.880877742946709e-2
allele num: 638
num of homozygotes: 0

East Asian
type: Population
allele count: 133
allele frequency: 2.07682698313554e-2
allele num: 6404
num of homozygotes: 3

MQRankSum
type: SiteQuality
SIO_000300: 5.73e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.33e0

DP
type: SiteQuality
SIO_000300: 1.010885e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.1e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.78e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.140000000000001e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.51e-1

MQ
type: SiteQuality
SIO_000300: 4.258e1

QD
type: SiteQuality
SIO_000300: 2.397e1

East Asian
type: Population
allele count: 1
allele frequency: 1.569365976145637e-4
allele num: 6372
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 7.399577167019028e-4
allele num: 9460
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7718
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5112
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.9e-1

DP
type: SiteQuality
SIO_000300: 1.002533e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.974e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.55e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.9e-1

MQ
type: SiteQuality
SIO_000300: 3.542e1

FS
type: SiteQuality
SIO_000300: 2.328e0

QD
type: SiteQuality
SIO_000300: 1.022e1

VQSLOD
type: SiteQuality
SIO_000300: -2.461e0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50082
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9456
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5084
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.177e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.27e-2

QD
type: SiteQuality
SIO_000300: 9.210000000000001e0

MQ
type: SiteQuality
SIO_000300: 3.577e1

FS
type: SiteQuality
SIO_000300: 3.069e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.42e-1

DP
type: SiteQuality
SIO_000300: 1.003952e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.79e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50082
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.575795776867318e-4
allele num: 6346
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6276
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 636
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.069e0

MQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.2e-1

MQ
type: SiteQuality
SIO_000300: 3.577e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.27e-2

VQSLOD
type: SiteQuality
SIO_000300: -3.177e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.79e-1

QD
type: SiteQuality
SIO_000300: 9.210000000000001e0

DP
type: SiteQuality
SIO_000300: 1.003952e6

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6334
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 644
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.062022090059473e-4
allele num: 9416
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5098
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.341e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.11e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

QD
type: SiteQuality
SIO_000300: 2.461e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.35e-2

MQ
type: SiteQuality
SIO_000300: 5.419e1

DP
type: SiteQuality
SIO_000300: 1.004218e6

MQRankSum
type: SiteQuality
SIO_000300: -3.15e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.15e-1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.995530012771392e-5
allele num: 50112
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9416
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5098
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.11e0

VQSLOD
type: SiteQuality
SIO_000300: -4.341e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.15e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.419e1

MQRankSum
type: SiteQuality
SIO_000300: -3.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.35e-2

QD
type: SiteQuality
SIO_000300: 2.461e1

DP
type: SiteQuality
SIO_000300: 1.004218e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6292
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.007226013649137e-5
allele num: 49820
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6226
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 640
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 3.946e1

QD
type: SiteQuality
SIO_000300: 3.02e1

MQRankSum
type: SiteQuality
SIO_000300: -1.93e-1

DP
type: SiteQuality
SIO_000300: 1.003534e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.78e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.994e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.542e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.83e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6024
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7438
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6246
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

MQ
type: SiteQuality
SIO_000300: 3.711e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.632e-1

DP
type: SiteQuality
SIO_000300: 1.052921e6

BaseQRankSum
type: SiteQuality
SIO_000300: -8.19e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e-1

FS
type: SiteQuality
SIO_000300: 1.4607e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.65e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.632e1

QD
type: SiteQuality
SIO_000300: 3.215e1

Latino
type: Population
allele count: 3239
allele frequency: 5.185718860070445e-1
allele num: 6246
num of homozygotes: 454

African
type: Population
allele count: 3403
allele frequency: 4.575154611454692e-1
allele num: 7438
num of homozygotes: 168

South Asian
type: Population
allele count: 3036
allele frequency: 3.484848484848485e-1
allele num: 8712
num of homozygotes: 134

Other
type: Population
allele count: 271
allele frequency: 4.546979865771812e-1
allele num: 596
num of homozygotes: 23

DP
type: SiteQuality
SIO_000300: 1.052921e6

QD
type: SiteQuality
SIO_000300: 3.215e1

MQ
type: SiteQuality
SIO_000300: 3.711e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e-1

FS
type: SiteQuality
SIO_000300: 1.4607e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.632e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.65e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.632e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.19e-1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.885298442743486e-5
allele num: 53042
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5490
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 676
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.566e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.8e-2

DP
type: SiteQuality
SIO_000300: 9.92166e5

VQSLOD
type: SiteQuality
SIO_000300: -1.225e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.350000000000001e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -3.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-3

QD
type: SiteQuality
SIO_000300: 7.14e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.203e0

South Asian
type: Population
allele count: 20
allele frequency: 1.954270080125073e-3
allele num: 10234
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5456
num of homozygotes: 0

East Asian
type: Population
allele count: 80
allele frequency: 1.310615989515072e-2
allele num: 6104
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.251877816725087e-4
allele num: 7988
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.34e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.977e0

QD
type: SiteQuality
SIO_000300: 1.261e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -8.91e-1

MQ
type: SiteQuality
SIO_000300: 3.711e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.11e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.599e0

DP
type: SiteQuality
SIO_000300: 9.76291e5

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47534
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4952
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5976
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5776
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.89e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.88e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.34e0

MQRankSum
type: SiteQuality
SIO_000300: -1.5e-1

DP
type: SiteQuality
SIO_000300: 9.70884e5

MQ
type: SiteQuality
SIO_000300: 3.454e1

QD
type: SiteQuality
SIO_000300: 6.25e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.1e-1

Other
type: Population
allele count: 1
allele frequency: 1.618122977346278e-3
allele num: 618
num of homozygotes: 0

South Asian
type: Population
allele count: 11
allele frequency: 1.139424072923141e-3
allele num: 9654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 25
allele frequency: 5.048465266558966e-3
allele num: 4952
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 136
allele frequency: 2.86110994235705e-3
allele num: 47534
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.454e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.89e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 8.88e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.73e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.1e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.5e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.34e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 9.70884e5

QD
type: SiteQuality
SIO_000300: 6.25e0