9-99329098-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99329098
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99329098
    reference: chr 9
allele count: 7
allele frequency: 1.138285416937687e-4
allele num: 61496
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.161-1333A>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000396951
  ensembl transcript: ENST00000452280
  gene symbol: CDC14B
  hgvsc: ENST00000452280.1:c.15A>T
  hgvsp: ENSP00000396951.1:p.His6Leu
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.161-1333A>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.146-1333A>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.80-1333A>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.250-1361A>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364390
  ensembl transcript: ENST00000375242
  gene symbol: CDC14B
  hgvsc: ENST00000375242.3:c.1A>T
  hgvsp: ENSP00000364390.3:p.Met1?
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.113-1333A>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.161-1333A>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.161-1333A>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.161-1333A>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.161-1333A>T
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: start lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3310
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10972
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11881
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 23727
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4975
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1390
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met1?
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

9-99329099-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99329099
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99329099
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 61094
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.161-1334C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364390
  ensembl transcript: ENST00000375242
  gene symbol: CDC14B
  hgvsc: ENST00000375242.3:c.-1C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000396951
  ensembl transcript: ENST00000452280
  gene symbol: CDC14B
  hgvsc: ENST00000452280.1:c.14C>A
  hgvsp: ENSP00000396951.1:p.His6Asn
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.113-1334C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.146-1334C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.80-1334C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.161-1334C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.161-1334C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.161-1334C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.161-1334C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.161-1334C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.250-1362C>A
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12044
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23762
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5044
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3319
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10681
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1818
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His6Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: South Asian
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

9-99329106-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99329106
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99329106
    reference: chr 9
allele count: 3
allele frequency: 5.211047420531527e-5
allele num: 57570
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.161-1341T>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.80-1341T>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000396951
  ensembl transcript: ENST00000452280
  gene symbol: CDC14B
  hgvsc: ENST00000452280.1:c.7T>C
  hgvsp: ENST00000452280.1:c.7T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364390
  ensembl transcript: ENST00000375242
  gene symbol: CDC14B
  hgvsc: ENST00000375242.3:c.-8T>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.161-1341T>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.250-1369T>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.161-1341T>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.113-1341T>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.161-1341T>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.161-1341T>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.146-1341T>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.161-1341T>C
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6276
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1394
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24006
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14025
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3163
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7084
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu3Leu
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum

9-99329108-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99329108
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99329108
    reference: chr 9
allele count: 1
allele frequency: 1.739796095897561e-5
allele num: 57478
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.80-1343C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.250-1371C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.113-1343C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.161-1343C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364390
  ensembl transcript: ENST00000375242
  gene symbol: CDC14B
  hgvsc: ENST00000375242.3:c.-10C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.161-1343C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.161-1343C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000396951
  ensembl transcript: ENST00000452280
  gene symbol: CDC14B
  hgvsc: ENST00000452280.1:c.5C>T
  hgvsp: ENSP00000396951.1:p.Leu3Phe
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.146-1343C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.161-1343C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.161-1343C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.161-1343C>T
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3149
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13981
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24055
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6293
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1397
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu3Phe
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD

9-99329110-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99329110
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99329110
    reference: chr 9
allele count: 1
allele frequency: 1.752418337305482e-5
allele num: 57064
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.161-1345T>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364390
  ensembl transcript: ENST00000375242
  gene symbol: CDC14B
  hgvsc: ENST00000375242.3:c.-12T>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000396951
  ensembl transcript: ENST00000452280
  gene symbol: CDC14B
  hgvsc: ENST00000452280.1:c.3T>C
  hgvsp: ENSP00000396951.1:p.Met2Thr
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.80-1345T>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.113-1345T>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.161-1345T>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.146-1345T>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.161-1345T>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.161-1345T>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.161-1345T>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.250-1373T>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.161-1345T>C
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24130
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3044
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14230
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1806
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6734
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6513
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met2Thr
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: Other
reference allele: A
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

9-99329113-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99329113
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99329113
    reference: chr 9
allele count: 1
allele frequency: 1.804988989567164e-5
allele num: 55402
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364390
  ensembl transcript: ENST00000375242
  gene symbol: CDC14B
  hgvsc: ENST00000375242.3:c.-15A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.146-1348A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.250-1376A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.80-1348A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.161-1348A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.161-1348A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.113-1348A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.161-1348A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.161-1348A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.161-1348A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.161-1348A>G
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1379
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24064
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7119
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5535
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14951
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1933
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2757
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum

9-99329120-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99329120
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99329120
    reference: chr 9
allele count: 1
allele frequency: 1.933787128712871e-5
allele num: 51712
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.161-1355G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.161-1355G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.146-1355G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.80-1355G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.113-1355G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.161-1355G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.161-1355G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.250-1383G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.161-1355G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364390
  ensembl transcript: ENST00000375242
  gene symbol: CDC14B
  hgvsc: ENST00000375242.3:c.-22G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.161-1355G>C
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8381
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24180
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4030
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1992
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15264
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2342
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29925
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum

9-99329129-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99329129
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99329129
    reference: chr 9
allele count: 1
allele frequency: 2.100575557702811e-5
allele num: 47606
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.161-1364C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.80-1364C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.161-1364C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.250-1392C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364390
  ensembl transcript: ENST00000375242
  gene symbol: CDC14B
  hgvsc: ENST00000375242.3:c.-31C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.113-1364C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.161-1364C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.161-1364C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.161-1364C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.161-1364C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.146-1364C>T
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14715
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10357
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1730
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2821
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24216
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 980
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

9-99329135-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99329135
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99329135
    reference: chr 9
allele count: 1
allele frequency: 2.219755826859046e-5
allele num: 45050
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.161-1370C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.113-1370C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364390
  ensembl transcript: ENST00000375242
  gene symbol: CDC14B
  hgvsc: ENST00000375242.3:c.-37C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.161-1370C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.146-1370C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.80-1370C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.161-1370C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.161-1370C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.161-1370C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.161-1370C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.250-1398C>T
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1927
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1339
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2423
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11458
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13957
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1682
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24193
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

9-99329138-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99329138
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99329138
    reference: chr 9
allele count: 34
allele frequency: 7.865636422523481e-4
allele num: 43226
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.250-1401A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.161-1373A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.161-1373A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.113-1373A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.161-1373A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.161-1373A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.80-1373A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364390
  ensembl transcript: ENST00000375242
  gene symbol: CDC14B
  hgvsc: ENST00000375242.3:c.-40A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.146-1373A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.161-1373A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.161-1373A>G
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1742
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 2150
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12145
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13356
  bin: 1.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 1880
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24198
  bin: 7.5e0
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12091
  bin: 7.5e0
  variant carriers: 3
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: T
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

9-99329143-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99329143
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99329143
    reference: chr 9
allele count: 1
allele frequency: 2.507648327398566e-5
allele num: 39878
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.161-1378C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.161-1378C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.250-1406C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.161-1378C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.161-1378C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.161-1378C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.113-1378C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364390
  ensembl transcript: ENST00000375242
  gene symbol: CDC14B
  hgvsc: ENST00000375242.3:c.-45C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.146-1378C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.161-1378C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.80-1378C>A
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12170
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13316
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24768
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1646
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2638
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD

9-99329146-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99329146
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99329146
    reference: chr 9
allele count: 2
allele frequency: 5.178395733001916e-5
allele num: 38622
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364390
  ensembl transcript: ENST00000375242
  gene symbol: CDC14B
  hgvsc: ENST00000375242.3:c.-48C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.161-1381C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.161-1381C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.113-1381C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.80-1381C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.161-1381C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.146-1381C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.161-1381C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.250-1409C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.161-1381C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.161-1381C>T
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13677
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11656
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1630
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1847
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25308
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22111
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

9-99329146-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99329146
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99329146
    reference: chr 9
allele count: 1
allele frequency: 2.589197866500958e-5
allele num: 38622
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.146-1381C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.161-1381C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364390
  ensembl transcript: ENST00000375242
  gene symbol: CDC14B
  hgvsc: ENST00000375242.3:c.-48C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.80-1381C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.161-1381C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.113-1381C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.161-1381C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.161-1381C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.161-1381C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.250-1409C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.161-1381C>A
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13677
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1630
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11656
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25308
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1847
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 910
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD

9-99329148-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99329148
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99329148
    reference: chr 9
allele count: 736
allele frequency: 1.911886949293433e-2
allele num: 38496
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.146-1383G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.80-1383G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.161-1383G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.161-1383G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.161-1383G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.113-1383G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.161-1383G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.161-1383G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364390
  ensembl transcript: ENST00000375242
  gene symbol: CDC14B
  hgvsc: ENST00000375242.3:c.-50G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.161-1383G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.250-1411G>C
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 3.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 11520
  bin: 1.25e1
  variant carriers: 419
genotype depth: GenotypeDepth
  all individuals: 25483
  bin: 7.5e0
  variant carriers: 542
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 3.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 1.75e1
  variant carriers: 126
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 4.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13617
  bin: 2.5e0
  variant carriers: 74
genotype depth: GenotypeDepth
  all individuals: 1778
  bin: 2.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 2.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 4.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 4.75e1
  variant carriers: 43
num of homozygotes: 67
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD

9-99329148-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99329148
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99329148
    reference: chr 9
allele count: 3
allele frequency: 7.793017456359102e-5
allele num: 38496
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.161-1383G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.161-1383G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.80-1383G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.113-1383G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.161-1383G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364390
  ensembl transcript: ENST00000375242
  gene symbol: CDC14B
  hgvsc: ENST00000375242.3:c.-50G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.161-1383G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.146-1383G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.161-1383G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.250-1411G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.161-1383G>A
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13617
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25483
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1778
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11520
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: DP

9-99329149-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99329149
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99329149
    reference: chr 9
allele count: 1
allele frequency: 2.6732249786142e-5
allele num: 37408
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.113-1384C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.161-1384C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.161-1384C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.161-1384C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.161-1384C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.250-1412C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.161-1384C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.80-1384C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.161-1384C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364390
  ensembl transcript: ENST00000375242
  gene symbol: CDC14B
  hgvsc: ENST00000375242.3:c.-51C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.146-1384C>T
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1319
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25800
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14018
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11053
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1699
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1778
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 506
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ

9-99329150-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99329150
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99329150
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 37646
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364390
  ensembl transcript: ENST00000375242
  gene symbol: CDC14B
  hgvsc: ENST00000375242.3:c.-52T>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.161-1385T>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.161-1385T>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.161-1385T>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.80-1385T>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.161-1385T>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.161-1385T>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.250-1413T>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.113-1385T>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.146-1385T>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.161-1385T>C
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: 5' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25850
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11036
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14044
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1771
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1318
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1711
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2016
  bin: 6.25e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: African
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: QD

9-99329153-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99329153
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99329153
    reference: chr 9
allele count: 1
allele frequency: 2.749821261617995e-5
allele num: 36366
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.161-1388C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.161-1388C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.161-1388C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.161-1388C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.146-1388C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.161-1388C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364390
  ensembl transcript: ENST00000375242
  gene symbol: CDC14B
  hgvsc: ENST00000375242.3:c.-55C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.161-1388C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.80-1388C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.113-1388C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.250-1416C>G
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1629
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1319
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10501
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26356
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14046
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 501
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: African
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum

9-99329153-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99329153
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99329153
    reference: chr 9
allele count: 1
allele frequency: 2.749821261617995e-5
allele num: 36366
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.250-1416C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.161-1388C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.161-1388C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.161-1388C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.161-1388C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.161-1388C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.80-1388C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364390
  ensembl transcript: ENST00000375242
  gene symbol: CDC14B
  hgvsc: ENST00000375242.3:c.-55C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.113-1388C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.161-1388C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.146-1388C>A
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1319
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14046
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26356
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10501
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1629
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19349
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: G
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum

9-99380728-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380728
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380728
    reference: chr 9
allele count: 9
allele frequency: 7.870297497245396e-5
allele num: 114354
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+773G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+773G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+773G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+773G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+773G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+773G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+773G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.112+49G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+773G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.249+49G>C
  variant of: http://identifiers.org/hgnc/1719
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5241
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6809
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2000
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8057
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5879
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3402
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7963
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3682
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7302
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2342
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 1
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: QD

9-99380732-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380732
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380732
    reference: chr 9
allele count: 1
allele frequency: 8.74263433057649e-6
allele num: 114382
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+769G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+769G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+769G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+769G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+769G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.249+45G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+769G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+769G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+769G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.112+45G>C
  variant of: http://identifiers.org/hgnc/1719
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5940
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3657
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8069
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6810
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2342
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7350
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3682
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5241
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7974
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 808
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 612
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: QD

9-99380732-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380732
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380732
    reference: chr 9
allele count: 1
allele frequency: 8.74263433057649e-6
allele num: 114382
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+769G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+769G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+769G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+769G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.249+45G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.112+45G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+769G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+769G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+769G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+769G>A
  variant of: http://identifiers.org/hgnc/1719
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7974
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6810
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2342
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5241
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3657
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5940
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3682
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8069
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7350
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2703
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 808
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 687
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum

9-99380733-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380733
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380733
    reference: chr 9
allele count: 1
allele frequency: 8.738814317673378e-6
allele num: 114432
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+768C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+768C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+768C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+768C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+768C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.249+44C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+768C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.112+44C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+768C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+768C>T
  variant of: http://identifiers.org/hgnc/1719
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7402
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5241
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3789
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5943
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2342
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7977
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1452
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6811
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3683
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8080
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 597
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: QD

9-99380733-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380733
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380733
    reference: chr 9
allele count: 1
allele frequency: 8.738814317673378e-6
allele num: 114432
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+768C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.249+44C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.112+44C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+768C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+768C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+768C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+768C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+768C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+768C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+768C>G
  variant of: http://identifiers.org/hgnc/1719
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8080
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1452
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5241
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7402
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7977
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3789
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3683
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2342
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5943
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6811
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1664
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2708
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

9-99380743-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380743
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380743
    reference: chr 9
allele count: 1
allele frequency: 8.730726920323387e-6
allele num: 114538
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+758A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+758A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+758A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+758A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+758A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+758A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.249+34A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.112+34A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+758A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+758A>G
  variant of: http://identifiers.org/hgnc/1719
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6816
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3683
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5242
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2342
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8094
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6198
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7531
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7996
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4584
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3411
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD

9-99380748-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380748
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380748
    reference: chr 9
allele count: 1
allele frequency: 8.727069624561465e-6
allele num: 114586
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+753C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+753C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+753C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+753C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+753C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.112+29C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.249+29C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+753C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+753C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+753C>G
  variant of: http://identifiers.org/hgnc/1719
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7577
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8101
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6341
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4863
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6819
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7999
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3684
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2343
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5242
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum

http://identifiers.org/exac.variant/9-99380754-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380754
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380754
    reference: chr 9
allele count: 268
allele frequency: 2.337222890830761e-3
allele num: 114666
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+747G>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+747G>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.249+23G>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+747G>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+747G>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.112+23G>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+747G>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+747G>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+747G>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+747G>T
  variant of: http://identifiers.org/hgnc/1719
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4933
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7625
  bin: 3.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 2348
  bin: 6.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8100
  bin: 3.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 3683
  bin: 5.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 7.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 6508
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 6802
  bin: 4.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 7993
  bin: 4.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1372
  bin: 6.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 9.75e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 8.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 5238
  bin: 5.25e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2580
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 4
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

9-99380755-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380755
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380755
    reference: chr 9
allele count: 1
allele frequency: 8.717635777177229e-6
allele num: 114710
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+746A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+746A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+746A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+746A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+746A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.249+22A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.112+22A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+746A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+746A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+746A>G
  variant of: http://identifiers.org/hgnc/1719
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5240
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6559
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5020
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7640
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3683
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8117
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2345
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6810
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1367
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8005
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3552
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: T
site quality: MQ
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

9-99380757-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380757
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380757
    reference: chr 9
allele count: 1
allele frequency: 8.714900737280603e-6
allele num: 114746
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+744A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+744A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+744A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.249+20A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+744A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+744A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+744A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+744A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+744A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.112+20A>G
  variant of: http://identifiers.org/hgnc/1719
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6584
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6811
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5100
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1366
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7651
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5240
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3683
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8120
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8005
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2345
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32490
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum

9-99380770-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380770
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380770
    reference: chr 9
allele count: 1
allele frequency: 8.701099819017123e-6
allele num: 114928
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.112+7A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+731A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.249+7A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+731A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+731A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+731A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+731A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+731A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+731A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+731A>G
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6796
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7721
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3683
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5242
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1366
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8124
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5241
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2345
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8003
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6813
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
hgvs: n.249+7A>G
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

9-99380774-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380774
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380774
    reference: chr 9
allele count: 2
allele frequency: 1.73982636532874e-5
allele num: 114954
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.249+3A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+727A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.112+3A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+727A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+727A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+727A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+727A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+727A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+727A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+727A>G
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8002
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5243
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2345
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1366
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7731
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6820
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8125
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5241
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3683
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6812
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32491
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.25e1
  variant carriers: 0
hgvs: n.249+3A>G
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum

9-99380786-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380786
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380786
    reference: chr 9
allele count: 82
allele frequency: 7.131178905624935e-4
allele num: 114988
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.240G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+715G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+715G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+715G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+715G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.103G>A
  hgvsp: ENSP00000400480.1:p.Ala35Thr
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+715G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+715G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+715G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+715G>A
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5244
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 8117
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6854
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3691
  bin: 5.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7739
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2348
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 5199
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 9.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 6805
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7990
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 7.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1749
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala35Thr
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum

9-99380789-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380789
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380789
    reference: chr 9
allele count: 2
allele frequency: 1.739190928380118e-5
allele num: 114996
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.100C>T
  hgvsp: ENSP00000400480.1:p.Pro34Ser
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+712C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+712C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+712C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+712C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+712C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+712C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+712C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.237C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+712C>T
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8000
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8121
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2349
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3690
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5196
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6874
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7747
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5242
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6808
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3064
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro34Ser
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD

9-99380791-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380791
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380791
    reference: chr 9
allele count: 20
allele frequency: 1.739130434782609e-4
allele num: 115000
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+710A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+710A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.235A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+710A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.98A>G
  hgvsp: ENSP00000400480.1:p.Gln33Arg
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+710A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+710A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+710A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+710A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+710A>G
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6872
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8117
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7997
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6806
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5203
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3688
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2350
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 9.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 7742
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2765
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32507
  bin: 9.75e1
  variant carriers: 20
hgvs: p.Gln33Arg
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
reference allele: T
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff

9-99380803-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380803
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380803
    reference: chr 9
allele count: 1
allele frequency: 8.694744896184747e-6
allele num: 115012
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+698T>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+698T>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+698T>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+698T>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.86T>C
  hgvsp: ENSP00000400480.1:p.Phe29Ser
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+698T>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+698T>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+698T>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.223T>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+698T>C
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5238
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8117
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6889
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7996
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6808
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7735
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5207
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3688
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Phe29Ser
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: VQSLOD

9-99380808-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380808
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380808
    reference: chr 9
allele count: 1
allele frequency: 8.695198511382016e-6
allele num: 115006
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.218C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.81C>G
  hgvsp: ENST00000415608.1:c.81C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+693C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+693C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+693C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+693C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+693C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+693C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+693C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+693C>G
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5238
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8115
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5207
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7732
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7996
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3688
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6878
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6807
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2602
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Val27Val
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

9-99380813-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380813
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380813
    reference: chr 9
allele count: 1
allele frequency: 8.695652173913043e-6
allele num: 115000
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+688G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.76G>A
  hgvsp: ENSP00000400480.1:p.Val26Ile
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+688G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+688G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.213G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+688G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+688G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+688G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+688G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+688G>A
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6875
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6807
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5238
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7996
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3688
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5207
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7731
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8114
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32496
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Val26Ile
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: FS
site quality: DP

9-99380815-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380815
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380815
    reference: chr 9
allele count: 15
allele frequency: 1.304393196285088e-4
allele num: 114996
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+686G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+686G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.211G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+686G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+686G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+686G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+686G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+686G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.74G>A
  hgvsp: ENSP00000400480.1:p.Arg25Gln
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+686G>A
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7995
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8110
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7729
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5206
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6870
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6808
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3688
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5237
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg25Gln
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ

9-99380821-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380821
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380821
    reference: chr 9
allele count: 1
allele frequency: 8.697467297522961e-6
allele num: 114976
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+680A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+680A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.68A>G
  hgvsp: ENSP00000400480.1:p.Asn23Ser
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+680A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.205A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+680A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+680A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+680A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+680A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+680A>G
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7729
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3690
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5237
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6854
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5201
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8111
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7998
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6808
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asn23Ser
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum

9-99380824-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380824
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380824
    reference: chr 9
allele count: 1
allele frequency: 8.699131826643701e-6
allele num: 114954
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.65C>T
  hgvsp: ENSP00000400480.1:p.Thr22Met
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.202C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+677C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+677C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+677C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+677C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+677C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+677C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+677C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+677C>T
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5193
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7998
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6807
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7723
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6844
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8112
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5237
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3690
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr22Met
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

9-99380832-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380832
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380832
    reference: chr 9
allele count: 1
allele frequency: 8.705493166187865e-6
allele num: 114870
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+669C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.57C>T
  hgvsp: ENST00000415608.1:c.57C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.194C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+669C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+669C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+669C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+669C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+669C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+669C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+669C>T
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6808
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6817
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7997
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8107
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5237
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7710
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3689
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5130
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32495
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala19Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD

9-99380832-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380832
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380832
    reference: chr 9
allele count: 2
allele frequency: 1.741098633237573e-5
allele num: 114870
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+669C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.57C>G
  hgvsp: ENST00000415608.1:c.57C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+669C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+669C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+669C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+669C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+669C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+669C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+669C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.194C>G
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6808
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8107
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3689
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5130
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6817
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7997
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7710
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5237
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9216
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ala19Ala
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

9-99380840-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380840
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380840
    reference: chr 9
allele count: 7
allele frequency: 6.100217864923748e-5
allele num: 114750
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+661G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+661G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+661G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.186G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+661G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+661G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+661G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.49G>A
  hgvsp: ENSP00000400480.1:p.Glu17Lys
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+661G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+661G>A
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6763
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7685
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7997
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5105
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2351
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5237
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8105
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6806
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3689
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9151
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Glu17Lys
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

9-99380849-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380849
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380849
    reference: chr 9
allele count: 1
allele frequency: 8.723872003349968e-6
allele num: 114628
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+652G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+652G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+652G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+652G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.40G>C
  hgvsp: ENSP00000400480.1:p.Val14Leu
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+652G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+652G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+652G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.177G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+652G>C
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7670
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5052
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2348
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8100
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6707
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3685
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6800
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7995
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2737
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val14Leu
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ

9-99380849-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380849
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380849
    reference: chr 9
allele count: 30
allele frequency: 2.61716160100499e-4
allele num: 114628
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+652G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+652G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.177G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+652G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+652G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+652G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+652G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.40G>A
  hgvsp: ENSP00000400480.1:p.Val14Met
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+652G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+652G>A
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7995
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6707
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5052
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3685
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7670
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2348
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6800
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8100
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 9.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 5235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3057
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1713
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2577
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Val14Met
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: BaseQRankSum

9-99380854-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380854
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380854
    reference: chr 9
allele count: 1
allele frequency: 8.732404205525866e-6
allele num: 114516
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+647C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+647C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+647C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+647C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+647C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+647C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.35C>T
  hgvsp: ENSP00000400480.1:p.Thr12Met
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.172C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+647C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+647C>T
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6676
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5237
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6803
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4975
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7669
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8000
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8099
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3687
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr12Met
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: BaseQRankSum

9-99380862-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380862
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380862
    reference: chr 9
allele count: 1
allele frequency: 8.753194916144393e-6
allele num: 114244
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+639A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+639A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+639A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+639A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.164A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.27A>G
  hgvsp: ENST00000415608.1:c.27A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+639A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+639A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+639A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+639A>G
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8092
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7999
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6803
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4794
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5237
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6553
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3687
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7644
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2732
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 680
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Glu9Glu
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ

9-99380863-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380863
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380863
    reference: chr 9
allele count: 12
allele frequency: 1.050640890943476e-4
allele num: 114216
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+638A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+638A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+638A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+638A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.163A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+638A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.26A>G
  hgvsp: ENSP00000400480.1:p.Glu9Gly
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+638A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+638A>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+638A>G
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7995
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7641
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4781
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5237
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6803
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6529
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 8089
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3687
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Glu9Gly
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
reference allele: T
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

9-99380865-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380865
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380865
    reference: chr 9
allele count: 2
allele frequency: 1.752479758858785e-5
allele num: 114124
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+636G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.24G>A
  hgvsp: ENST00000415608.1:c.24G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+636G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.161G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+636G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+636G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+636G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+636G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+636G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+636G>A
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3688
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7996
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6805
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2354
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6455
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4744
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7618
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5237
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8083
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3056
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Lys8Lys
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD

9-99380869-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380869
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380869
    reference: chr 9
allele count: 1
allele frequency: 8.771468168342018e-6
allele num: 114006
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+632A>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+632A>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+632A>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+632A>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+632A>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+632A>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.157A>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.20A>C
  hgvsp: ENSP00000400480.1:p.Glu7Ala
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+632A>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+632A>C
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2354
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4721
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8077
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3688
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7995
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6806
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6374
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7590
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Glu7Ala
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: T
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum

9-99380870-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380870
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380870
    reference: chr 9
allele count: 1
allele frequency: 8.777627582816916e-6
allele num: 113926
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+631G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+631G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.156G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+631G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+631G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.19G>A
  hgvsp: ENSP00000400480.1:p.Glu7Lys
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+631G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+631G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+631G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+631G>A
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8075
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7991
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4688
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6343
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3688
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2354
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6805
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7575
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 951
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Glu7Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD

http://identifiers.org/exac.variant/9-99380870-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380870
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380870
    reference: chr 9
allele count: 1
allele frequency: 8.777627582816916e-6
allele num: 113926
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+631G>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.156G>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+631G>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+631G>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+631G>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.19G>T
  hgvsp: ENSP00000400480.1:p.Glu7Ter
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+631G>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+631G>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+631G>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+631G>T
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7575
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4688
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6805
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2354
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3688
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6343
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7991
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8075
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2732
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Glu7Ter
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQ

9-99380877-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380877
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380877
    reference: chr 9
allele count: 2
allele frequency: 1.758581879572313e-5
allele num: 113728
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+624G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+624G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.12G>A
  hgvsp: ENST00000415608.1:c.12G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+624G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+624G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+624G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+624G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+624G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.149G>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+624G>A
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3688
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6232
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8066
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2354
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7990
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6803
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4598
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7537
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32490
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg4Arg
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

9-99380879-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380879
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380879
    reference: chr 9
allele count: 1
allele frequency: 8.807623879229862e-6
allele num: 113538
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+622C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+622C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+622C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+622C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.10C>T
  hgvsp: ENSP00000400480.1:p.Arg4Trp
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.147C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+622C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+622C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+622C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+622C>T
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4545
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7510
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8058
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2354
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7988
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6801
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6188
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3688
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2729
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg4Trp
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff

9-99380880-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380880
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380880
    reference: chr 9
allele count: 18
allele frequency: 1.585288522511097e-4
allele num: 113544
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+621C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.146C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.9C>T
  hgvsp: ENST00000415608.1:c.9C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+621C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+621C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+621C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+621C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+621C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+621C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+621C>T
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7987
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7505
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3687
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6175
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4552
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1378
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6799
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2356
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8061
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3418
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg3Arg
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP

9-99380882-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380882
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380882
    reference: chr 9
allele count: 1
allele frequency: 8.811038468993955e-6
allele num: 113494
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.144C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+619C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+619C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+619C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.7C>T
  hgvsp: ENSP00000400480.1:p.Arg3Cys
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+619C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+619C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+619C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+619C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+619C>T
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8061
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6799
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2354
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7987
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3686
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7498
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4544
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6170
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8050
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg3Cys
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

9-99380885-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380885
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380885
    reference: chr 9
allele count: 1
allele frequency: 8.814921899791968e-6
allele num: 113444
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+616C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+616C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+616C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+616C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+616C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+616C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000400480
  ensembl transcript: ENST00000415608
  gene symbol: CDC14B
  hgvsc: ENST00000415608.1:c.4C>G
  hgvsp: ENSP00000400480.1:p.Pro2Ala
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.141C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+616C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+616C>G
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3686
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7987
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6144
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8050
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6798
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2354
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4523
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7491
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2728
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1758
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Pro2Ala
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS

9-99380895-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380895
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380895
    reference: chr 9
allele count: 1
allele frequency: 8.858337467224152e-6
allele num: 112888
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+606G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+606G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+606G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+606G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+606G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+606G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.131G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+606G>C
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+606G>C
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2354
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7442
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5234
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3686
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7982
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8028
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6013
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4316
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6797
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 609
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3346
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

9-99380896-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380896
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380896
    reference: chr 9
allele count: 1
allele frequency: 8.873586881289154e-6
allele num: 112694
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+605C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.130C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+605C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+605C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+605C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+605C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+605C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+605C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+605C>A
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5992
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6795
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8019
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7418
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3687
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4262
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7978
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2354
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1662
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 681
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3326
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum

9-99380897-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380897
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380897
    reference: chr 9
allele count: 2
allele frequency: 1.776482919116733e-5
allele num: 112582
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+604C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+604C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.129C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+604C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+604C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+604C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+604C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+604C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+604C>T
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5234
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3686
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4251
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7975
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2355
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7396
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6795
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8011
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5977
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1658
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3054
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32482
  bin: 9.75e1
  variant carriers: 2
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP

9-99380898-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380898
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380898
    reference: chr 9
allele count: 12
allele frequency: 1.065851882116782e-4
allele num: 112586
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+603C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.128C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+603C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+603C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+603C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+603C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+603C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+603C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+603C>T
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5232
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8009
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3685
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4259
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5971
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6794
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7395
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7973
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2354
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1247
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1660
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

9-99380901-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380901
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380901
    reference: chr 9
allele count: 1
allele frequency: 8.886045354375489e-6
allele num: 112536
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+600C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+600C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+600C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+600C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+600C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.125C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+600C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+600C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+600C>T
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7386
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4237
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5959
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7976
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2356
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3688
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8004
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6794
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5232
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3052
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32484
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

9-99380903-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380903
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380903
    reference: chr 9
allele count: 3
allele frequency: 2.675656873762509e-5
allele num: 112122
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+598C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+598C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+598C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.123C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+598C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+598C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+598C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+598C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+598C>T
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2356
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4164
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7966
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5229
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7329
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3688
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6791
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5912
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7961
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3050
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2504
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum

9-99380912-C-CG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380912
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380913
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 111360
alternate allele: CG
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+588dupC
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+588dupC
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+588dupC
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+588dupC
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+588dupC
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+588dupC
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+588dupC
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.113dupC
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+588dupC
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 7925
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5224
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2357
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7913
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6759
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3942
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5804
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3688
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7211
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 854
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3126
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD

9-99380913-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380913
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380913
    reference: chr 9
allele count: 1
allele frequency: 8.978111364493366e-6
allele num: 111382
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+588C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+588C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+588C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+588C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+588C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+588C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.113C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+588C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+588C>G
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3943
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7919
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5224
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7199
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2358
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6754
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3689
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7907
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5830
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1751
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3040
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2686
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

9-99380914-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380914
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380914
    reference: chr 9
allele count: 1
allele frequency: 8.971828458639871e-6
allele num: 111460
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+587C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+587C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+587C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+587C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+587C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+587C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.112C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+587C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+587C>T
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3943
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6728
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5812
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7868
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5203
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7192
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1367
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7897
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2357
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3668
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3135
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1235
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2675
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

9-99380914-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380914
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380914
    reference: chr 9
allele count: 206
allele frequency: 1.848196662479813e-3
allele num: 111460
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+587C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.112C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+587C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+587C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+587C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+587C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+587C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+587C>G
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+587C>G
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7868
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 8.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6728
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3943
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7897
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2357
  bin: 6.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3668
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 7.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 9.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 5812
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7192
  bin: 3.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 7.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1367
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 5203
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 9.75e1
  variant carriers: 98
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 8.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 896
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1597
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ

9-99380914-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380914
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380914
    reference: chr 9
allele count: 5
allele frequency: 4.485914229319936e-5
allele num: 111460
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+587C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+587C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.112C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+587C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+587C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+587C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+587C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+587C>A
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+587C>A
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7868
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3943
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2357
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5812
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7192
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3668
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1367
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7897
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6728
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5203
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32544
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 2466
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1235
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

9-99380917-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 99380917
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 99380917
    reference: chr 9
allele count: 15
allele frequency: 1.348411571169163e-4
allele num: 111242
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000265659
  ensembl transcript: ENST00000265659
  gene symbol: CDC14B
  hgvsc: ENST00000265659.2:c.160+584C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364388
  ensembl transcript: ENST00000375240
  gene symbol: CDC14B
  hgvsc: ENST00000375240.3:c.160+584C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364384
  ensembl transcript: ENST00000375236
  gene symbol: CDC14B
  hgvsc: ENST00000375236.1:c.160+584C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000496750
  gene symbol: CDC14B
  hgvsc: ENST00000496750.1:n.79+584C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000420572
  ensembl transcript: ENST00000463569
  gene symbol: CDC14B
  hgvsc: ENST00000463569.1:c.160+584C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000364389
  ensembl transcript: ENST00000375241
  gene symbol: CDC14B
  hgvsc: ENST00000375241.1:c.160+584C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000413940
  ensembl transcript: ENST00000412285
  gene symbol: CDC14B
  hgvsc: ENST00000412285.2:c.145+584C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000081377
  ensembl transcript: ENST00000463547
  gene symbol: CDC14B
  hgvsc: ENST00000463547.1:n.109C>T
  variant of: http://identifiers.org/hgnc/1719
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000081377
  ensembl protein: ENSP00000417897
  ensembl transcript: ENST00000474602
  gene symbol: CDC14B
  hgvsc: ENST00000474602.1:c.160+584C>T
  variant of: http://identifiers.org/hgnc/1719
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5676
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3848
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7871
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6735
  bin: 4.75e1
  variant carriers: 1
num of homozygotes: 0
reference allele: G

GenotypeDepth
all individuals: 12
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 101
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 490
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 689
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30180
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 851
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1236
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 267
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1165
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 344
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1892
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 730
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 576
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11585
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2380
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5025
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 551
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 434
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.050020500205002e-4
allele num: 4878
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4214
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 1.803318105313777e-4
allele num: 33272
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5936
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1854
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.901e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.27e-2

FS
type: SiteQuality
SIO_000300: 5.28e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.07e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.3e-2

DP
type: SiteQuality
SIO_000300: 8.12186e5

MQRankSum
type: SiteQuality
SIO_000300: -1.12e-1

QD
type: SiteQuality
SIO_000300: 9.140000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.23e-1

GenotypeDepth
all individuals: 12
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 28
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 254
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30293
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1160
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 597
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 318
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 549
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1224
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 886
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 548
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2383
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5116
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 734
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11260
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 505
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1906
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 684
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 33060
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1842
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4840
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 428
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4174
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5864
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10886
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.469e0

MQRankSum
type: SiteQuality
SIO_000300: -4.49e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.389999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.62e-1

QD
type: SiteQuality
SIO_000300: 5.66e0

MQ
type: SiteQuality
SIO_000300: 5.878e1

DP
type: SiteQuality
SIO_000300: 8.08704e5

ClippingRankSum
type: SiteQuality
SIO_000300: 1.02e0

VQSLOD
type: SiteQuality
SIO_000300: -2.699e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.31e-2

GenotypeDepth
all individuals: 12
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 40
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 664
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 390
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7406
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2677
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31074
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1072
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 426
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 304
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 547
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 869
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2233
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6375
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1162
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1406
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 873
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 528
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 678
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.86706497386109e-4
allele num: 10712
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1662
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4526
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3970
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 414
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.238341968911917e-5
allele num: 30880
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5406
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.35e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.8e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.71e0

VQSLOD
type: SiteQuality
SIO_000300: -7.38e-1

DP
type: SiteQuality
SIO_000300: 7.56541e5

QD
type: SiteQuality
SIO_000300: 6.83e0

FS
type: SiteQuality
SIO_000300: 7.102e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.55e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.5e-2

GenotypeDepth
all individuals: 40
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7155
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 304
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2187
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31524
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1059
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 858
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 548
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 843
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 528
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2624
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6414
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8047
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1072
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 675
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1161
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 297
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4518
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3960
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1678
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.244014792707455e-5
allele num: 30826
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5390
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10696
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 410
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -9.845e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.01e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.55e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.93e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.582e0

DP
type: SiteQuality
SIO_000300: 7.56667e5

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.16e-1

QD
type: SiteQuality
SIO_000300: 6.55e0

GenotypeDepth
all individuals: 28
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31732
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2222
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1066
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 920
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 979
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 390
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 548
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 858
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6619
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7781
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 526
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1161
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 674
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2666
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 6.075334143377885e-4
allele num: 1646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10674
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5324
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3962
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 406
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.609e1

VQSLOD
type: SiteQuality
SIO_000300: -1.044e0

QD
type: SiteQuality
SIO_000300: 8.27e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.87e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.56e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e-1

DP
type: SiteQuality
SIO_000300: 7.47667e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.66e-1

GenotypeQuality
all individuals: 129
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2366
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6275
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 962
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31314
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1104
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1048
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 548
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 671
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7193
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 524
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1383
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2833
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1161
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3832
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 400
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.382034632034632e-5
allele num: 29568
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5116
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4356
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.89e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.96e-1

DP
type: SiteQuality
SIO_000300: 7.24668e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.25e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.192e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.72e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.18e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.89e-1

GenotypeQuality
all individuals: 205
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4332
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1025
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2969
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1472
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8570
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2536
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 867
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 981
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 524
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 671
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 547
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2195
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1161
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1342
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.159827213822894e-4
allele num: 4630
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4044
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 27412
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 374
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10306
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.444e1

VQSLOD
type: SiteQuality
SIO_000300: -2.031e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.055e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.6051e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.53e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.0e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.03e-2

DP
type: SiteQuality
SIO_000300: 6.88447e5

MQRankSum
type: SiteQuality
SIO_000300: 7.94e-1

GenotypeQuality
all individuals: 2133
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 784
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 519
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10678
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2636
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 938
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2999
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3187
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2176
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1161
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 545
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28372
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 666
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4076
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9984
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 25056
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3332
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 352
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.742731760833791e-4
allele num: 3646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1160
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.832e1

VQSLOD
type: SiteQuality
SIO_000300: -2.417e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.68e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.9e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.99e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.85e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.33e-2

QD
type: SiteQuality
SIO_000300: 5.68e0

DP
type: SiteQuality
SIO_000300: 6.46511e5

GenotypeQuality
all individuals: 173
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 933
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2642
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1161
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2768
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11600
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1059
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26726
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 661
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1009
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2262
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2970
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 544
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 513
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2784
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3160
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 338
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3346
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1030
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3720
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.227972264501945e-5
allele num: 23652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9804
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.26e0

QD
type: SiteQuality
SIO_000300: 4.54e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.56e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 5.73e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.36e-1

DP
type: SiteQuality
SIO_000300: 6.26526e5

FS
type: SiteQuality
SIO_000300: 5.528e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.89e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

GenotypeQuality
all individuals: 3256
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 546
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3004
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 660
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2918
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1050
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 301
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 140
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24713
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2471
bin: 6.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1398
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 517
bin: 7.25e1
variant carriers: 3

GenotypeQuality
all individuals: 191
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2683
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 927
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1191
bin: 9.75e1
variant carriers: 32

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 47
bin: 5.25e1
variant carriers: 3

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3170
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 22570
num of homozygotes: 0

African
type: Population
allele count: 33
allele frequency: 1.091269841269841e-2
allele num: 3024
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 978
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 332
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.031778786628147e-4
allele num: 9692
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.592e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.19e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.159e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.66e-2

QD
type: SiteQuality
SIO_000300: 9.01e0

DP
type: SiteQuality
SIO_000300: 6.14166e5

GenotypeQuality
all individuals: 258
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1018
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 544
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 511
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22382
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4049
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1298
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 659
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2187
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13398
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2791
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1162
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4023
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 915
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 320
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9436
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2798
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2990
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 3.541076487252125e-4
allele num: 2824
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.267e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.97e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 2.89e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.67e-1

DP
type: SiteQuality
SIO_000300: 5.96907e5

MQRankSum
type: SiteQuality
SIO_000300: 9.330000000000001e-1

FS
type: SiteQuality
SIO_000300: 4.472e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.0e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.379e0

GenotypeQuality
all individuals: 658
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2103
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14007
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2769
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 205
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 543
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2556
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4387
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1201
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 910
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3941
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 509
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1164
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 156
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 975
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 3.681885125184094e-4
allele num: 2716
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.073652566029633e-4
allele num: 9314
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 308
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2812
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2662
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19948
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.69e-1

DP
type: SiteQuality
SIO_000300: 5.91451e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 8.859999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: -7.315e-1

FS
type: SiteQuality
SIO_000300: 1.235e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.148e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.74e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2103
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1201
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22111
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2556
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 975
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4387
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1164
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 205
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14007
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3941
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2769
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 543
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 509
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 658
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9314
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19948
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2812
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2716
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 3.756574004507889e-4
allele num: 2662
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 308
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.148e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.74e-2

DP
type: SiteQuality
SIO_000300: 5.91451e5

VQSLOD
type: SiteQuality
SIO_000300: -7.315e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.36e-1

FS
type: SiteQuality
SIO_000300: 1.235e0

MQRankSum
type: SiteQuality
SIO_000300: -8.69e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 8.859999999999999e0

GenotypeQuality
all individuals: 536
bin: 7.25e1
variant carriers: 31

GenotypeQuality
all individuals: 2679
bin: 2.75e1
variant carriers: 20

GenotypeQuality
all individuals: 593
bin: 8.25e1
variant carriers: 55

GenotypeQuality
all individuals: 4447
bin: 1.25e1
variant carriers: 33

GenotypeQuality
all individuals: 2446
bin: 3.25e1
variant carriers: 31

GenotypeQuality
all individuals: 342
bin: 9.25e1
variant carriers: 43

GenotypeQuality
all individuals: 13868
bin: 7.5e0
variant carriers: 38

GenotypeQuality
all individuals: 1331
bin: 2.5e0
variant carriers: 8

GenotypeQuality
all individuals: 680
bin: 7.75e1
variant carriers: 33

GenotypeQuality
all individuals: 926
bin: 3.75e1
variant carriers: 29

GenotypeQuality
all individuals: 3494
bin: 1.75e1
variant carriers: 63

GenotypeQuality
all individuals: 228
bin: 4.25e1
variant carriers: 25

GenotypeQuality
all individuals: 1765
bin: 9.75e1
variant carriers: 635

GenotypeQuality
all individuals: 69
bin: 5.25e1
variant carriers: 40

GenotypeQuality
all individuals: 300
bin: 8.75e1
variant carriers: 47

GenotypeQuality
all individuals: 2076
bin: 6.25e1
variant carriers: 23

GenotypeQuality
all individuals: 47
bin: 5.75e1
variant carriers: 24

GenotypeQuality
all individuals: 902
bin: 6.75e1
variant carriers: 19

GenotypeQuality
all individuals: 21841
bin: 2.25e1
variant carriers: 51

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2614
num of homozygotes: 0

African
type: Population
allele count: 685
allele frequency: 2.44119743406985e-1
allele num: 2806
num of homozygotes: 67

South Asian
type: Population
allele count: 1
allele frequency: 1.076426264800861e-4
allele num: 9290
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 14
allele frequency: 7.057163020465773e-4
allele num: 19838
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

Latino
type: Population
allele count: 34
allele frequency: 1.216893342877595e-2
allele num: 2794
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 6.451612903225806e-3
allele num: 310
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.81e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.54e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.420000000000001e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 5.9098e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.614e1

GenotypeQuality
all individuals: 926
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4447
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3494
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2446
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2076
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13868
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21841
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 342
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 902
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2679
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1331
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1765
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 47
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 593
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 536
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 680
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.008166145780825e-4
allele num: 19838
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2794
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 3.563791874554526e-4
allele num: 2806
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9290
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 310
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.54e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.420000000000001e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.81e0

QD
type: SiteQuality
SIO_000300: 1.614e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

DP
type: SiteQuality
SIO_000300: 5.9098e5

GenotypeQuality
all individuals: 1987
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 891
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 949
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4398
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2508
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5035
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 254
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2737
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14443
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20899
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 648
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 547
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1127
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1181
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 167
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19310
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2676
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 304
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.081782778018174e-4
allele num: 9244
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2562
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.94e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.79e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.87e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.12e-2

QD
type: SiteQuality
SIO_000300: 7.58e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 5.82066e5

BaseQRankSum
type: SiteQuality
SIO_000300: -4.223e0

VQSLOD
type: SiteQuality
SIO_000300: -8.624000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 305
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2760
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 889
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 21374
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1181
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 505
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5026
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14466
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2525
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 952
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 927
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 648
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 547
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 254
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4076
bin: 1.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19438
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2698
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9266
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 306
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 812
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2524
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.06e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.73e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.107e0

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 5.81647e5

QD
type: SiteQuality
SIO_000300: 7.11e0

GenotypeQuality
all individuals: 1870
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5167
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 548
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19349
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14530
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 878
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5647
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2723
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1182
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 63
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 651
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2498
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 254
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1236
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 953
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18720
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2450
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 294
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9168
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 3.918495297805642e-4
allele num: 2552
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2418
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.82e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.87e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 8.25e-1

DP
type: SiteQuality
SIO_000300: 5.75e5

MQRankSum
type: SiteQuality
SIO_000300: -4.21e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.079e0

FS
type: SiteQuality
SIO_000300: 2.269e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.21e-1

GenotypeQuality
all individuals: 248
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5647
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5167
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 651
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 501
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2723
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14530
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1236
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 953
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1870
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 548
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 878
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2498
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1182
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 254
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18720
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 294
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2418
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2450
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9168
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.30890052356021e-3
allele num: 764
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.82e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.87e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.079e0

DP
type: SiteQuality
SIO_000300: 5.75e5

FS
type: SiteQuality
SIO_000300: 2.269e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.25e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.21e-1

GenotypeQuality
all individuals: 341
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 562
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 465
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 827
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 767
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3207
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 775
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3026
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2531
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1734
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32459
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 379
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1656
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 636
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2708
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5769
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8490
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.59140610013428e-5
allele num: 62556
num of homozygotes: 1

Latino
type: Population
allele count: 3
allele frequency: 2.620087336244541e-4
allele num: 11450
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15904
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.6e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.158e0

VQSLOD
type: SiteQuality
SIO_000300: 3.6e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.07e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.98e-1

DP
type: SiteQuality
SIO_000300: 2.355327e6

QD
type: SiteQuality
SIO_000300: 1.925e1

GenotypeQuality
all individuals: 91
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1656
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 687
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2703
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32460
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2517
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1741
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 376
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 481
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3036
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 555
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3252
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6383
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 464
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 1.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15938
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.598823266076168e-5
allele num: 62546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.55e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.76e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.58e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.35e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-3

FS
type: SiteQuality
SIO_000300: 3.358e0

MQRankSum
type: SiteQuality
SIO_000300: 1.3e0

DP
type: SiteQuality
SIO_000300: 2.35833e6

QD
type: SiteQuality
SIO_000300: 1.544e1

GenotypeQuality
all individuals: 63
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1656
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2517
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 481
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32460
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6383
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3036
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1741
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 555
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 464
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 612
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 376
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3252
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8490
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62546
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.274312962730582e-5
allele num: 15938
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.3e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.55e-1

QD
type: SiteQuality
SIO_000300: 1.544e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.58e-1

DP
type: SiteQuality
SIO_000300: 2.35833e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-3

FS
type: SiteQuality
SIO_000300: 3.358e0

VQSLOD
type: SiteQuality
SIO_000300: 2.35e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.76e0

GenotypeQuality
all individuals: 838
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 492
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 527
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1742
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32465
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 203
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3283
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 602
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2518
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6767
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 337
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2708
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3036
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1664
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11446
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.177856301531213e-4
allele num: 8490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15976
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.88e0

MQRankSum
type: SiteQuality
SIO_000300: 5.679999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.67e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.96e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.360163e6

QD
type: SiteQuality
SIO_000300: 1.391e1

GenotypeQuality
all individuals: 312
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 337
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3036
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1742
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 597
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 602
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 838
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3283
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 492
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32465
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6767
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 527
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2518
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15976
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8490
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11446
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.59836327600537e-5
allele num: 62564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.679999999999999e-1

DP
type: SiteQuality
SIO_000300: 2.360163e6

QD
type: SiteQuality
SIO_000300: 1.391e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.88e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.96e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 9.67e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.96e-1

GenotypeQuality
all individuals: 32488
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2749
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 413
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7935
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2559
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 403
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 814
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3065
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1703
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1758
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.596984892522917e-5
allele num: 62618
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8490
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16024
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.17e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 5.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.92e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.9e-1

DP
type: SiteQuality
SIO_000300: 2.370941e6

FS
type: SiteQuality
SIO_000300: 6.747e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.7e-1

QD
type: SiteQuality
SIO_000300: 1.486e1

GenotypeQuality
all individuals: 3470
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3067
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1759
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2571
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 776
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32489
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 294
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1715
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2756
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8287
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8488
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16054
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.177856301531213e-4
allele num: 8490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.9e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.549e0

VQSLOD
type: SiteQuality
SIO_000300: 7.01e-1

FS
type: SiteQuality
SIO_000300: 1.979e0

QD
type: SiteQuality
SIO_000300: 1.155e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.375842e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.5e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.11e0

GenotypeQuality
all individuals: 95
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8498
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3495
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3050
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1756
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2747
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 750
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 27
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32597
bin: 9.75e1
variant carriers: 264

GenotypeQuality
all individuals: 82
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1719
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 23
allele frequency: 3.670603255665496e-4
allele num: 62660
num of homozygotes: 0

African
type: Population
allele count: 231
allele frequency: 2.72020725388601e-2
allele num: 8492
num of homozygotes: 4

South Asian
type: Population
allele count: 2
allele frequency: 1.241927471435668e-4
allele num: 16104
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.165501165501166e-3
allele num: 858
num of homozygotes: 0

Latino
type: Population
allele count: 11
allele frequency: 9.603631918980269e-4
allele num: 11454
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.31e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.97e-1

MQ
type: SiteQuality
SIO_000300: 5.98e1

QD
type: SiteQuality
SIO_000300: 1.411e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.6e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 6.48e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.427e0

DP
type: SiteQuality
SIO_000300: 2.387933e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.659999999999999e-1

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2760
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 749
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2607
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3063
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1744
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32488
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8711
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1764
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.595659805329504e-5
allele num: 62670
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8488
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16138
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.971e1

QD
type: SiteQuality
SIO_000300: 1.266e1

FS
type: SiteQuality
SIO_000300: 4.038e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

DP
type: SiteQuality
SIO_000300: 2.383667e6

VQSLOD
type: SiteQuality
SIO_000300: 1.14e0

MQRankSum
type: SiteQuality
SIO_000300: 1.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.07e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.66e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e0

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8822
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3563
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3063
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1741
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 726
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1767
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2757
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2611
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11454
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62694
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8488
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.192717364379489e-5
allele num: 16148
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.336e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.265e0

MQ
type: SiteQuality
SIO_000300: 5.954e1

MQRankSum
type: SiteQuality
SIO_000300: 4.83e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.56e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.92e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.384958e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.5e-2

GenotypeQuality
all individuals: 1755
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9229
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32492
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3066
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2616
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 668
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1765
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2772
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3631
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16244
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.176193836744295e-4
allele num: 8502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62766
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.892e0

VQSLOD
type: SiteQuality
SIO_000300: -5.204e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.78e0

DP
type: SiteQuality
SIO_000300: 2.390879e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.63e-1

MQ
type: SiteQuality
SIO_000300: 5.95e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.57e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.14e-1

QD
type: SiteQuality
SIO_000300: 1.669e1

GenotypeQuality
all individuals: 108
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3643
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9271
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1765
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 640
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1754
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3065
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2618
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2769
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16248
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.185423502054598e-5
allele num: 62786
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.508e1

DP
type: SiteQuality
SIO_000300: 2.391432e6

VQSLOD
type: SiteQuality
SIO_000300: 1.87e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.89e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.3e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.072e0

MQRankSum
type: SiteQuality
SIO_000300: 2.46e-1

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1763
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 553
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9281
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3647
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2764
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2606
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3059
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32537
bin: 9.75e1
variant carriers: 82

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

South Asian
type: Population
allele count: 81
allele frequency: 4.980937154101587e-3
allele num: 16262
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8488
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.591951095262354e-5
allele num: 62816
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.244e1

VQSLOD
type: SiteQuality
SIO_000300: 3.76e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -4.648e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

FS
type: SiteQuality
SIO_000300: 1.651e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.88e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.27e-1

DP
type: SiteQuality
SIO_000300: 2.396569e6

MQRankSum
type: SiteQuality
SIO_000300: 4.2e-2

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1767
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32503
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2766
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 553
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9305
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3652
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1748
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2610
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16264
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.183699458771092e-5
allele num: 62820
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -7.89e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.33e-1

FS
type: SiteQuality
SIO_000300: 1.433e0

QD
type: SiteQuality
SIO_000300: 1.236e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.67e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.1e-2

MQ
type: SiteQuality
SIO_000300: 5.972e1

DP
type: SiteQuality
SIO_000300: 2.393506e6

VQSLOD
type: SiteQuality
SIO_000300: 8.46e-1

GenotypeQuality
all individuals: 3064
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2608
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 566
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1747
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9323
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1767
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3651
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16264
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 20
allele frequency: 3.183496752833312e-4
allele num: 62824
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8488
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.394791e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.3e-2

QD
type: SiteQuality
SIO_000300: 1.225e1

MQRankSum
type: SiteQuality
SIO_000300: -6.0e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.537e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.52e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1746
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1765
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9352
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 570
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3647
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2765
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3063
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2604
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32495
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16264
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62838
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8490
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.17813383600377e-4
allele num: 8488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.084e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.38e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

DP
type: SiteQuality
SIO_000300: 2.393613e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.31e-1

MQ
type: SiteQuality
SIO_000300: 5.977e1

QD
type: SiteQuality
SIO_000300: 1.265e1

MQRankSum
type: SiteQuality
SIO_000300: 1.44e0

VQSLOD
type: SiteQuality
SIO_000300: 9.2e-2

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1744
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 510
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32495
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 16
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3063
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1764
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3646
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9332
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2762
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16264
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62840
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8486
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.178411501296253e-4
allele num: 8486
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.21e-1

QD
type: SiteQuality
SIO_000300: 1.386e1

MQRankSum
type: SiteQuality
SIO_000300: 1.16e0

FS
type: SiteQuality
SIO_000300: 6.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.4e-3

MQ
type: SiteQuality
SIO_000300: 5.947e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.2e-2

DP
type: SiteQuality
SIO_000300: 2.393294e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.305e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.81e-1

GenotypeQuality
all individuals: 77
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3063
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2761
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9341
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1763
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1743
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2600
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3639
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8486
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16262
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.591343093570974e-5
allele num: 62840
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8482
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.173e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.62e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.858e0

VQSLOD
type: SiteQuality
SIO_000300: -2.389e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.79e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

QD
type: SiteQuality
SIO_000300: 1.355e1

MQ
type: SiteQuality
SIO_000300: 5.959e1

FS
type: SiteQuality
SIO_000300: 1.3827e1

DP
type: SiteQuality
SIO_000300: 2.39311e6

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9334
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1739
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3637
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2759
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3062
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2602
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1762
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32503
bin: 9.75e1
variant carriers: 15

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

African
type: Population
allele count: 15
allele frequency: 1.769285208775655e-3
allele num: 8478
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16262
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8486
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62840
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.16e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.7e-1

QD
type: SiteQuality
SIO_000300: 1.054e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.14e-1

FS
type: SiteQuality
SIO_000300: 1.878e0

VQSLOD
type: SiteQuality
SIO_000300: 2.95e0

DP
type: SiteQuality
SIO_000300: 2.394404e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

MQ
type: SiteQuality
SIO_000300: 5.967e1

GenotypeQuality
all individuals: 97
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3061
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3631
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32497
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 525
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2601
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2763
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1763
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1738
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9329
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8478
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11454
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.150818058801821e-5
allele num: 16258
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62830
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.08e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.61e-1

MQ
type: SiteQuality
SIO_000300: 5.928e1

DP
type: SiteQuality
SIO_000300: 2.393071e6

QD
type: SiteQuality
SIO_000300: 1.188e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 5.29e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.08e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.19e0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9311
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 511
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2760
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3625
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3060
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2599
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1763
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1736
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32497
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.591951095262354e-5
allele num: 62816
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16258
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8472
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11454
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8480
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.36e0

VQSLOD
type: SiteQuality
SIO_000300: 3.87e0

MQ
type: SiteQuality
SIO_000300: 5.989e1

FS
type: SiteQuality
SIO_000300: 1.775e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 7.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.9e-1

DP
type: SiteQuality
SIO_000300: 2.392703e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.74e-1

QD
type: SiteQuality
SIO_000300: 1.383e1

GenotypeQuality
all individuals: 69
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1764
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3058
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9216
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2750
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1732
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3609
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2595
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.593320799209713e-5
allele num: 62762
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8480
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11446
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8458
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16254
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.27e0

MQRankSum
type: SiteQuality
SIO_000300: -3.81e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.129e1

FS
type: SiteQuality
SIO_000300: 2.445e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.52e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

DP
type: SiteQuality
SIO_000300: 2.391217e6

VQSLOD
type: SiteQuality
SIO_000300: 8.63e-1

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1732
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2750
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3609
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2595
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 423
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1764
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32495
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3058
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16254
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.358490566037736e-4
allele num: 8480
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8458
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11446
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62762
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

FS
type: SiteQuality
SIO_000300: 2.445e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

QD
type: SiteQuality
SIO_000300: 1.129e1

MQRankSum
type: SiteQuality
SIO_000300: -3.81e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.63e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.52e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.27e0

DP
type: SiteQuality
SIO_000300: 2.391217e6

GenotypeQuality
all individuals: 265
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2588
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2745
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3058
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 391
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1722
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3595
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1763
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32495
bin: 9.75e1
variant carriers: 7

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11430
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62694
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8442
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.180916391119509e-4
allele num: 8468
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.692762186115214e-4
allele num: 16248
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

QD
type: SiteQuality
SIO_000300: 1.213e1

FS
type: SiteQuality
SIO_000300: 1.722e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.381e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.5e-2

MQ
type: SiteQuality
SIO_000300: 5.979e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.6e-2

DP
type: SiteQuality
SIO_000300: 2.389601e6

VQSLOD
type: SiteQuality
SIO_000300: 1.84e0

GenotypeQuality
all individuals: 2577
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9078
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32498
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 403
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1713
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3588
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3057
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1762
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8420
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11418
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8456
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.156877231867996e-5
allele num: 16242
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62624
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.188e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.465e0

VQSLOD
type: SiteQuality
SIO_000300: 3.79e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.22e-1

DP
type: SiteQuality
SIO_000300: 2.390886e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.41e-1

FS
type: SiteQuality
SIO_000300: 5.28e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.2e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

GenotypeQuality
all individuals: 9078
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 403
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1762
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32498
bin: 9.75e1
variant carriers: 30

GenotypeQuality
all individuals: 43
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3588
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2737
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16242
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11418
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 30
allele frequency: 4.790495656617271e-4
allele num: 62624
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8456
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8420
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.79e0

FS
type: SiteQuality
SIO_000300: 5.28e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.41e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

QD
type: SiteQuality
SIO_000300: 1.188e1

DP
type: SiteQuality
SIO_000300: 2.390886e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.465e0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 372
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1705
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8976
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3059
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3583
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 444
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1761
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2571
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2735
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32490
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16232
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8400
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8444
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11416
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.598414372942042e-5
allele num: 62562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.389999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.86e-1

QD
type: SiteQuality
SIO_000300: 1.308e1

VQSLOD
type: SiteQuality
SIO_000300: 6.830000000000001e-1

FS
type: SiteQuality
SIO_000300: 6.38e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.438e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

MQ
type: SiteQuality
SIO_000300: 5.957e1

DP
type: SiteQuality
SIO_000300: 2.385641e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.466e0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3529
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8718
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32490
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1760
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3057
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2564
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1697
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8422
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16222
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8346
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.602769585844339e-5
allele num: 62392
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.89e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.67e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.076e0

DP
type: SiteQuality
SIO_000300: 2.380649e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.49e0

QD
type: SiteQuality
SIO_000300: 1.086e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

FS
type: SiteQuality
SIO_000300: 3.719e0

MQ
type: SiteQuality
SIO_000300: 5.948e1

GenotypeQuality
all individuals: 3525
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 708
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 342
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1697
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1759
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2732
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32493
bin: 9.75e1
variant carriers: 12

GenotypeQuality
all individuals: 8681
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3056
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2564
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8338
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.603077909586406e-4
allele num: 62380
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16220
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8422
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.754385964912281e-4
allele num: 11400
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.873e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.18e-1

DP
type: SiteQuality
SIO_000300: 2.381326e6

MQRankSum
type: SiteQuality
SIO_000300: 1.92e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.84e0

MQ
type: SiteQuality
SIO_000300: 5.987e1

VQSLOD
type: SiteQuality
SIO_000300: 3.81e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.48e-1

QD
type: SiteQuality
SIO_000300: 1.218e1

GenotypeQuality
all individuals: 36
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32491
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 8542
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1759
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1697
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 334
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 808
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2561
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3519
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2733
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8416
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62322
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11394
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8320
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.233197681588359e-4
allele num: 16218
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.378006e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.572e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.999999999999999e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.524e-1

FS
type: SiteQuality
SIO_000300: 1.187e0

MQRankSum
type: SiteQuality
SIO_000300: -7.12e-1

MQ
type: SiteQuality
SIO_000300: 5.983e1

QD
type: SiteQuality
SIO_000300: 9.42e0

GenotypeQuality
all individuals: 119
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1690
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8430
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2733
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3495
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1758
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 899
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32489
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2556
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3056
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11386
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62248
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8410
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.16827041697508e-5
allele num: 16212
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8298
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.375381e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.14e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.05e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.152e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.2e-2

GenotypeQuality
all individuals: 3484
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2555
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2732
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8350
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1758
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32490
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1690
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3056
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.608078988839932e-5
allele num: 62186
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8294
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11386
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16206
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

FS
type: SiteQuality
SIO_000300: 3.232e0

VQSLOD
type: SiteQuality
SIO_000300: 8.81e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.81e0

DP
type: SiteQuality
SIO_000300: 2.374133e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.21e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.62e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.8e-2

QD
type: SiteQuality
SIO_000300: 1.203e1

GenotypeQuality
all individuals: 329
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3056
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 951
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32490
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 64
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2555
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3484
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8350
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1758
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1690
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8294
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11386
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62186
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.170554115759595e-5
allele num: 16206
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.81e0

QD
type: SiteQuality
SIO_000300: 1.203e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.21e0

MQRankSum
type: SiteQuality
SIO_000300: 5.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

VQSLOD
type: SiteQuality
SIO_000300: 8.81e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.62e-1

FS
type: SiteQuality
SIO_000300: 3.232e0

DP
type: SiteQuality
SIO_000300: 2.374133e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 64
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1683
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8141
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2549
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2731
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3458
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3055
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1143
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1758
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16202
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.611084259706783e-5
allele num: 62070
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.212121212121212e-4
allele num: 8250
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8378
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.4e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.25e0

DP
type: SiteQuality
SIO_000300: 2.36957e6

BaseQRankSum
type: SiteQuality
SIO_000300: 9.6e-2

QD
type: SiteQuality
SIO_000300: 8.220000000000001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 9.6e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.83e-1

GenotypeQuality
all individuals: 42
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3054
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1188
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1757
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8018
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32490
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2542
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1676
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3422
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.613684040664838e-5
allele num: 61970
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8352
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8212
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16186
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11370
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.73e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.63e0

FS
type: SiteQuality
SIO_000300: 1.568e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.51e0

QD
type: SiteQuality
SIO_000300: 1.121e1

VQSLOD
type: SiteQuality
SIO_000300: -2.869e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.3e-2

DP
type: SiteQuality
SIO_000300: 2.367078e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

GenotypeQuality
all individuals: 2542
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1673
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2728
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 379
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8043
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3054
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32500
bin: 9.75e1
variant carriers: 18

GenotypeQuality
all individuals: 1207
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1757
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11368
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16188
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 18
allele frequency: 2.904537533079455e-4
allele num: 61972
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8218
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8350
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.217e0

QD
type: SiteQuality
SIO_000300: 1.155e1

VQSLOD
type: SiteQuality
SIO_000300: 4.81e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.29e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.92e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.8e-2

MQ
type: SiteQuality
SIO_000300: 5.955e1

DP
type: SiteQuality
SIO_000300: 2.367788e6

GenotypeQuality
all individuals: 116
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32487
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2726
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3411
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3054
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1238
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1673
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2540
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1758
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16184
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8348
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11370
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.614622016985824e-5
allele num: 61934
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8210
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.5e-1

DP
type: SiteQuality
SIO_000300: 2.366445e6

FS
type: SiteQuality
SIO_000300: 6.535e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.756e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 5.570000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.302e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.094e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.75e0

GenotypeQuality
all individuals: 116
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1268
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1672
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3054
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2541
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32486
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 408
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8012
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3417
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.615508885298869e-5
allele num: 61900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8210
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11370
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16182
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8338
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.29e1

VQSLOD
type: SiteQuality
SIO_000300: -9.1e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.42e0

MQ
type: SiteQuality
SIO_000300: 5.939e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.56e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.172e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.27e0

DP
type: SiteQuality
SIO_000300: 2.365174e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

FS
type: SiteQuality
SIO_000300: 7.323e0

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3054
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1664
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32480
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 31
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1264
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2720
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2537
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7626
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1757
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8138
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8282
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.624853763161316e-5
allele num: 61544
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11336
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16148
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.949e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

QD
type: SiteQuality
SIO_000300: 1.452e1

FS
type: SiteQuality
SIO_000300: 1.227e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.98e0

VQSLOD
type: SiteQuality
SIO_000300: 6.19e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.36e0

MQRankSum
type: SiteQuality
SIO_000300: 4.93e-1

DP
type: SiteQuality
SIO_000300: 2.357514e6

GenotypeQuality
all individuals: 81
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3054
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1256
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7510
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2718
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2534
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1757
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32480
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.627763127909626e-5
allele num: 61434
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8094
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11324
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8262
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16146
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.05e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.975e0

QD
type: SiteQuality
SIO_000300: 1.434e1

DP
type: SiteQuality
SIO_000300: 2.355147e6

MQRankSum
type: SiteQuality
SIO_000300: 5.84e-1

FS
type: SiteQuality
SIO_000300: 1.5482e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 6.7e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.67e-1

GenotypeQuality
all individuals: 7448
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3313
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1237
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 734
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1756
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2718
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2533
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11322
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8092
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.424242424242424e-4
allele num: 8250
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61350
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16136
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.934e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.72e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.92e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.9e-1

FS
type: SiteQuality
SIO_000300: 2.364e0

MQRankSum
type: SiteQuality
SIO_000300: 3.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.64e-1

QD
type: SiteQuality
SIO_000300: 1.147e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

DP
type: SiteQuality
SIO_000300: 2.35363e6

GenotypeQuality
all individuals: 46
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32486
bin: 9.75e1
variant carriers: 12

GenotypeQuality
all individuals: 3311
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2717
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 730
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1756
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3052
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7469
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2531
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8090
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11322
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16134
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 1.955926457165211e-4
allele num: 61352
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8256
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.8e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.883e0

FS
type: SiteQuality
SIO_000300: 7.13e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.5e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -8.58e-1

QD
type: SiteQuality
SIO_000300: 1.084e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.64e-1

MQ
type: SiteQuality
SIO_000300: 5.969e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

DP
type: SiteQuality
SIO_000300: 2.35426e6

GenotypeQuality
all individuals: 183
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1659
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1266
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1755
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3310
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 743
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7463
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2717
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2530
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8074
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8250
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.833922261484099e-5
allele num: 11320
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16132
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61328
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 7.8e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.35282e6

MQ
type: SiteQuality
SIO_000300: 5.968e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.84e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.21e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.16e-1

QD
type: SiteQuality
SIO_000300: 9.800000000000001e0

GenotypeQuality
all individuals: 1753
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1206
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1640
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32485
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 48
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2706
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 860
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3238
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7273
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.912878291628455e-5
allele num: 61064
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8226
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8002
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11292
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16118
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.6e-3

QD
type: SiteQuality
SIO_000300: 4.08e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.21e-1

FS
type: SiteQuality
SIO_000300: 2.0864e1

VQSLOD
type: SiteQuality
SIO_000300: -2.186e0

DP
type: SiteQuality
SIO_000300: 2.346975e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.57e0

MQ
type: SiteQuality
SIO_000300: 5.986e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.2e-2

MQRankSum
type: SiteQuality
SIO_000300: -4.64e-1

GenotypeQuality
all individuals: 162
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32477
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1606
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6715
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1749
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1182
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2686
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3043
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2473
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8188
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16074
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11264
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60522
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.199999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

FS
type: SiteQuality
SIO_000300: 2.283e0

DP
type: SiteQuality
SIO_000300: 2.33424e6

QD
type: SiteQuality
SIO_000300: 6.0e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.46e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.199999999999999e-2

MQ
type: SiteQuality
SIO_000300: 6.018e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.05e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.556999999999999e-1

GenotypeQuality
all individuals: 2472
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32477
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1604
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1207
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 875
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6795
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3139
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11264
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16076
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8190
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.267105930055753e-4
allele num: 7892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.21e-1

FS
type: SiteQuality
SIO_000300: 3.125e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

MQ
type: SiteQuality
SIO_000300: 5.971e1

MQRankSum
type: SiteQuality
SIO_000300: -2.36e-1

QD
type: SiteQuality
SIO_000300: 1.135e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.12e-1

DP
type: SiteQuality
SIO_000300: 2.333999e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.109e0

GenotypeQuality
all individuals: 79
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1745
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3030
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 896
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6854
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2466
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1597
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32544
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16078
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.649947201689546e-5
allele num: 60608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7910
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8192
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11262
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.309e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.76e-1

DP
type: SiteQuality
SIO_000300: 2.342123e6

FS
type: SiteQuality
SIO_000300: 9.340000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.979e1

VQSLOD
type: SiteQuality
SIO_000300: 4.5e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.15e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.196e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.89e-1

GenotypeQuality
all individuals: 38
bin: 5.25e1
variant carriers: 3

GenotypeQuality
all individuals: 35
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3135
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3030
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32544
bin: 9.75e1
variant carriers: 205

GenotypeQuality
all individuals: 1235
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 50
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6854
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2675
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1745
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2466
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 23
allele frequency: 1.430526184848862e-3
allele num: 16078
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8192
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 5.056890012642225e-4
allele num: 7910
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.03951367781155e-4
allele num: 6580
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.409638554216868e-3
allele num: 830
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 7.103534008169064e-4
allele num: 11262
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 167
allele frequency: 2.755411826821541e-3
allele num: 60608
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.5e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

QD
type: SiteQuality
SIO_000300: 1.309e1

DP
type: SiteQuality
SIO_000300: 2.342123e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.89e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.196e0

MQRankSum
type: SiteQuality
SIO_000300: 3.15e-1

FS
type: SiteQuality
SIO_000300: 9.340000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.76e-1

MQ
type: SiteQuality
SIO_000300: 5.979e1

GenotypeQuality
all individuals: 304
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3135
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 896
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6854
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2675
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3030
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1597
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1745
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11262
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.109839532280134e-4
allele num: 16078
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7910
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8192
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.5e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

QD
type: SiteQuality
SIO_000300: 1.309e1

FS
type: SiteQuality
SIO_000300: 9.340000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.15e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.196e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.89e-1

DP
type: SiteQuality
SIO_000300: 2.342123e6

MQ
type: SiteQuality
SIO_000300: 5.979e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.76e-1