http://identifiers.org/exac.variant/10-31810271-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810271
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810271
    reference: chr 10
allele count: 3
allele frequency: 2.47639173215347e-5
allele num: 121144
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.1807C>A
  hgvsp: ENSP00000444891.2:p.Pro603Thr
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.2721C>A
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2105C>A
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.1948C>A
  hgvsp: ENSP00000452787.1:p.Pro650Thr
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2266C>A
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2008C>A
  hgvsp: ENSP00000319248.9:p.Pro670Thr
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2011C>A
  hgvsp: ENSP00000354487.5:p.Pro671Thr
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2148C>A
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2077C>A
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.1960C>A
  hgvsp: ENSP00000391612.2:p.Pro654Thr
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16591
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2027
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 969
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6593
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32528
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1514
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Pro671Thr
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum

10-31810272-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810272
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810272
    reference: chr 10
allele count: 1
allele frequency: 8.254502831294471e-6
allele num: 121146
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2106C>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2078C>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.1808C>G
  hgvsp: ENSP00000444891.2:p.Pro603Arg
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.1961C>G
  hgvsp: ENSP00000391612.2:p.Pro654Arg
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.2722C>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2149C>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2267C>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2009C>G
  hgvsp: ENSP00000319248.9:p.Pro670Arg
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.1949C>G
  hgvsp: ENSP00000452787.1:p.Pro650Arg
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2012C>G
  hgvsp: ENSP00000354487.5:p.Pro671Arg
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32506
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2034
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16594
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6601
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2511
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro671Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/10-31810290-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810290
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810290
    reference: chr 10
allele count: 1
allele frequency: 8.255184255712587e-6
allele num: 121136
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.2740A>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.1826A>C
  hgvsp: ENSP00000444891.2:p.Asn609Thr
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2030A>C
  hgvsp: ENSP00000354487.5:p.Asn677Thr
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.1967A>C
  hgvsp: ENSP00000452787.1:p.Asn656Thr
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2285A>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.1979A>C
  hgvsp: ENSP00000391612.2:p.Asn660Thr
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2124A>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2167A>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2027A>C
  hgvsp: ENSP00000319248.9:p.Asn676Thr
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2096A>C
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16648
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32436
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2028
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6600
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asn677Thr
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
reference allele: A
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

10-31810290-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810290
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810290
    reference: chr 10
allele count: 1
allele frequency: 8.255184255712587e-6
allele num: 121136
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.1967A>G
  hgvsp: ENSP00000452787.1:p.Asn656Ser
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.1979A>G
  hgvsp: ENSP00000391612.2:p.Asn660Ser
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2030A>G
  hgvsp: ENSP00000354487.5:p.Asn677Ser
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2167A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2027A>G
  hgvsp: ENSP00000319248.9:p.Asn676Ser
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.2740A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.1826A>G
  hgvsp: ENSP00000444891.2:p.Asn609Ser
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2124A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2096A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2285A>G
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6600
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2028
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32436
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16648
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 788
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asn677Ser
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff

10-31810292-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810292
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810292
    reference: chr 10
allele count: 1
allele frequency: 8.256138438929344e-6
allele num: 121122
alternate allele: G
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2029C>G
  hgvsp: ENSP00000319248.9:p.Leu677Val
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.1969C>G
  hgvsp: ENSP00000452787.1:p.Leu657Val
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  clinical significance: not_provided
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2032C>G
  hgvsp: ENSP00000354487.5:p.Leu678Val
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.1981C>G
  hgvsp: ENSP00000391612.2:p.Leu661Val
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2098C>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2287C>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2126C>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.1828C>G
  hgvsp: ENSP00000444891.2:p.Leu610Val
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.2742C>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2169C>G
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2027
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6610
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16646
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32404
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu678Val
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/10-31810297-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810297
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810297
    reference: chr 10
allele count: 1
allele frequency: 8.255865792645674e-6
allele num: 121126
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2174A>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.2747A>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.1974A>C
  hgvsp: ENSP00000452787.1:p.Gln658His
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.1833A>C
  hgvsp: ENSP00000444891.2:p.Gln611His
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.1986A>C
  hgvsp: ENSP00000391612.2:p.Gln662His
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2037A>C
  hgvsp: ENSP00000354487.5:p.Gln679His
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2131A>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2292A>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2034A>C
  hgvsp: ENSP00000319248.9:p.Gln678His
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2103A>C
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32397
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6605
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16663
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2034
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2434
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gln679His
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum

10-31810305-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810305
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810305
    reference: chr 10
allele count: 1
allele frequency: 8.256820133430213e-6
allele num: 121112
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2182T>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2300T>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2111T>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2045T>G
  hgvsp: ENSP00000354487.5:p.Leu682Trp
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.1841T>G
  hgvsp: ENSP00000444891.2:p.Leu614Trp
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2042T>G
  hgvsp: ENSP00000319248.9:p.Leu681Trp
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.1994T>G
  hgvsp: ENSP00000391612.2:p.Leu665Trp
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.2755T>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2139T>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.1982T>G
  hgvsp: ENSP00000452787.1:p.Leu661Trp
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6601
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32423
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2032
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16673
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu682Trp
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: FS
site quality: BaseQRankSum

10-31810310-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810310
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810310
    reference: chr 10
allele count: 5
allele frequency: 4.128614602084125e-5
allele num: 121106
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.1987A>T
  hgvsp: ENSP00000452787.1:p.Met663Leu
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.2760A>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2116A>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.1999A>T
  hgvsp: ENSP00000391612.2:p.Met667Leu
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2144A>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2050A>T
  hgvsp: ENSP00000354487.5:p.Met684Leu
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.1846A>T
  hgvsp: ENSP00000444891.2:p.Met616Leu
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2187A>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2047A>T
  hgvsp: ENSP00000319248.9:p.Met683Leu
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2305A>T
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32410
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2031
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6616
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16676
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Met684Leu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

10-31810311-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810311
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810311
    reference: chr 10
allele count: 6
allele frequency: 4.954255705651154e-5
allele num: 121108
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.2761T>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2145T>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2117T>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.1847T>C
  hgvsp: ENSP00000444891.2:p.Met616Thr
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2051T>C
  hgvsp: ENSP00000354487.5:p.Met684Thr
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2000T>C
  hgvsp: ENSP00000391612.2:p.Met667Thr
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.1988T>C
  hgvsp: ENSP00000452787.1:p.Met663Thr
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2048T>C
  hgvsp: ENSP00000319248.9:p.Met683Thr
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2188T>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2306T>C
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16679
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32409
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2030
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6618
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Met684Thr
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum

10-31810312-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810312
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810312
    reference: chr 10
allele count: 2
allele frequency: 1.651664051531918e-5
allele num: 121090
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2146G>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.2762G>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.1848G>T
  hgvsp: ENSP00000444891.2:p.Met616Ile
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2049G>T
  hgvsp: ENSP00000319248.9:p.Met683Ile
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2118G>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.1989G>T
  hgvsp: ENSP00000452787.1:p.Met663Ile
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2189G>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2052G>T
  hgvsp: ENSP00000354487.5:p.Met684Ile
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2001G>T
  hgvsp: ENSP00000391612.2:p.Met667Ile
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2307G>T
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2030
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16677
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32405
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6626
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2513
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Met684Ile
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ

10-31810320-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810320
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810320
    reference: chr 10
allele count: 3
allele frequency: 2.476677949310658e-5
allele num: 121130
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2060C>T
  hgvsp: ENSP00000354487.5:p.Ser687Phe
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2009C>T
  hgvsp: ENSP00000391612.2:p.Ser670Phe
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2154C>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.1997C>T
  hgvsp: ENSP00000452787.1:p.Ser666Phe
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.1856C>T
  hgvsp: ENSP00000444891.2:p.Ser619Phe
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2197C>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2126C>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2057C>T
  hgvsp: ENSP00000319248.9:p.Ser686Phe
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.2770C>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2315C>T
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6628
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2025
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32429
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16691
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42124
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser687Phe
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: C
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

http://identifiers.org/exac.variant/10-31810324-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810324
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810324
    reference: chr 10
allele count: 709
allele frequency: 5.853022272854855e-3
allele num: 121134
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2001A>C
  hgvsp: ENST00000560721.2:c.2001A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.1860A>C
  hgvsp: ENST00000542815.3:c.1860A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2158A>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2130A>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2061A>C
  hgvsp: ENST00000320985.10:c.2061A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2201A>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2013A>C
  hgvsp: ENST00000446923.2:c.2013A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.2774A>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2064A>C
  hgvsp: ENST00000361642.5:c.2064A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2319A>C
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 5.75e1
  variant carriers: 67
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6568
  bin: 3.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.25e1
  variant carriers: 63
genotype depth: GenotypeDepth
  all individuals: 16539
  bin: 2.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 5.25e1
  variant carriers: 61
genotype depth: GenotypeDepth
  all individuals: 32122
  bin: 2.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 4.75e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 4.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 9.75e1
  variant carriers: 130
genotype depth: GenotypeDepth
  all individuals: 2008
  bin: 3.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.25e1
  variant carriers: 43
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Pro688Pro
num of homozygotes: 16
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

10-31810332-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810332
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810332
    reference: chr 10
allele count: 1
allele frequency: 8.254366559910193e-6
allele num: 121148
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2021C>G
  hgvsp: ENSP00000391612.2:p.Pro674Arg
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2327C>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2209C>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.1868C>G
  hgvsp: ENSP00000444891.2:p.Pro623Arg
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.2782C>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2138C>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2072C>G
  hgvsp: ENSP00000354487.5:p.Pro691Arg
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2069C>G
  hgvsp: ENSP00000319248.9:p.Pro690Arg
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2166C>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2009C>G
  hgvsp: ENSP00000452787.1:p.Pro670Arg
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6674
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16738
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32203
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2064
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro691Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

10-31810333-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810333
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810333
    reference: chr 10
allele count: 22
allele frequency: 1.816020603579212e-4
allele num: 121144
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2070A>G
  hgvsp: ENST00000320985.10:c.2070A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.1869A>G
  hgvsp: ENST00000542815.3:c.1869A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2139A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2073A>G
  hgvsp: ENST00000361642.5:c.2073A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2210A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2010A>G
  hgvsp: ENST00000560721.2:c.2010A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2022A>G
  hgvsp: ENST00000446923.2:c.2022A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.2783A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2328A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2167A>G
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16726
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6677
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32204
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2064
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 2522
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro691Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD

10-31810333-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810333
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810333
    reference: chr 10
allele count: 1
allele frequency: 8.254639107178234e-6
allele num: 121144
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.2783A>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2070A>T
  hgvsp: ENST00000320985.10:c.2070A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2010A>T
  hgvsp: ENST00000560721.2:c.2010A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.1869A>T
  hgvsp: ENST00000542815.3:c.1869A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2328A>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2022A>T
  hgvsp: ENST00000446923.2:c.2022A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2210A>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2073A>T
  hgvsp: ENST00000361642.5:c.2073A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2167A>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2139A>T
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32204
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2064
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6677
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16726
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro691Pro
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: South Asian
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum

10-31810334-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810334
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810334
    reference: chr 10
allele count: 1
allele frequency: 8.254775387561705e-6
allele num: 121142
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2071G>T
  hgvsp: ENSP00000319248.9:p.Val691Leu
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2329G>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2140G>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2074G>T
  hgvsp: ENSP00000354487.5:p.Val692Leu
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.2784G>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2211G>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.1870G>T
  hgvsp: ENSP00000444891.2:p.Val624Leu
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2023G>T
  hgvsp: ENSP00000391612.2:p.Val675Leu
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2168G>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2011G>T
  hgvsp: ENSP00000452787.1:p.Val671Leu
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2066
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6689
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16733
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32201
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7553
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Val692Leu
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

10-31810339-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810339
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810339
    reference: chr 10
allele count: 2
allele frequency: 1.650818806127839e-5
allele num: 121152
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2079A>T
  hgvsp: ENST00000361642.5:c.2079A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.2789A>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2145A>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2173A>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2334A>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.1875A>T
  hgvsp: ENST00000542815.3:c.1875A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2016A>T
  hgvsp: ENST00000560721.2:c.2016A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2076A>T
  hgvsp: ENST00000320985.10:c.2076A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2216A>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2028A>T
  hgvsp: ENST00000446923.2:c.2028A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6695
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32168
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16755
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2068
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1511
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gly693Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
population: Latino
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

10-31810342-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810342
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810342
    reference: chr 10
allele count: 151
allele frequency: 1.246306475841463e-3
allele num: 121158
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2337A>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2031A>T
  hgvsp: ENST00000446923.2:c.2031A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.1878A>T
  hgvsp: ENST00000542815.3:c.1878A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2019A>T
  hgvsp: ENST00000560721.2:c.2019A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2082A>T
  hgvsp: ENST00000361642.5:c.2082A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.2792A>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2219A>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2079A>T
  hgvsp: ENST00000320985.10:c.2079A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2148A>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2176A>T
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 6684
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2064
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16737
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32084
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 9.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 2434
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ser694Ser
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

10-31810343-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810343
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810343
    reference: chr 10
allele count: 1
allele frequency: 8.253549026081216e-6
allele num: 121160
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.1879A>G
  hgvsp: ENSP00000444891.2:p.Thr627Ala
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2080A>G
  hgvsp: ENSP00000319248.9:p.Thr694Ala
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2083A>G
  hgvsp: ENSP00000354487.5:p.Thr695Ala
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2220A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.2793A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2177A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2338A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2032A>G
  hgvsp: ENSP00000391612.2:p.Thr678Ala
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2020A>G
  hgvsp: ENSP00000452787.1:p.Thr674Ala
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2149A>G
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16810
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6720
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2075
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32101
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr695Ala
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: East Asian
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP

10-31810350-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810350
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810350
    reference: chr 10
allele count: 3
allele frequency: 2.47610558114198e-5
allele num: 121158
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2184A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2087A>G
  hgvsp: ENSP00000319248.9:p.Asn696Ser
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2090A>G
  hgvsp: ENSP00000354487.5:p.Asn697Ser
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.1886A>G
  hgvsp: ENSP00000444891.2:p.Asn629Ser
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.2800A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2039A>G
  hgvsp: ENSP00000391612.2:p.Asn680Ser
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2027A>G
  hgvsp: ENSP00000452787.1:p.Asn676Ser
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2156A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2345A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2227A>G
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32140
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2079
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6718
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16801
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1510
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Asn697Ser
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum

10-31810363-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810363
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810363
    reference: chr 10
allele count: 1
allele frequency: 8.253957772752034e-6
allele num: 121154
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2040T>C
  hgvsp: ENST00000560721.2:c.2040T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2052T>C
  hgvsp: ENST00000446923.2:c.2052T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2169T>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2240T>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2100T>C
  hgvsp: ENST00000320985.10:c.2100T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.1899T>C
  hgvsp: ENST00000542815.3:c.1899T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2358T>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.2813T>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2197T>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2103T>C
  hgvsp: ENST00000361642.5:c.2103T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16844
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6728
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2083
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32106
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser701Ser
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP

10-31810364-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810364
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810364
    reference: chr 10
allele count: 1
allele frequency: 8.25300409349003e-6
allele num: 121168
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2053A>G
  hgvsp: ENSP00000391612.2:p.Ser685Gly
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2170A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2104A>G
  hgvsp: ENSP00000354487.5:p.Ser702Gly
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2359A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.2814A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2241A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2041A>G
  hgvsp: ENSP00000452787.1:p.Ser681Gly
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2101A>G
  hgvsp: ENSP00000319248.9:p.Ser701Gly
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.1900A>G
  hgvsp: ENSP00000444891.2:p.Ser634Gly
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2198A>G
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16835
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6732
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32112
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2084
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ser702Gly
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD

10-31810378-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810378
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810378
    reference: chr 10
allele count: 1
allele frequency: 8.251097395953662e-6
allele num: 121196
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2055A>G
  hgvsp: ENST00000560721.2:c.2055A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2118A>G
  hgvsp: ENST00000361642.5:c.2118A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.2828A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2212A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2255A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2184A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2115A>G
  hgvsp: ENST00000320985.10:c.2115A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.1914A>G
  hgvsp: ENST00000542815.3:c.1914A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2067A>G
  hgvsp: ENST00000446923.2:c.2067A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2373A>G
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6735
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2083
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32108
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16845
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2544
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2457
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro706Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum

10-31810379-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810379
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810379
    reference: chr 10
allele count: 1
allele frequency: 8.252731654177533e-6
allele num: 121172
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2213T>A
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.2829T>A
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2256T>A
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2119T>A
  hgvsp: ENSP00000354487.5:p.Ser707Thr
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2185T>A
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.1915T>A
  hgvsp: ENSP00000444891.2:p.Ser639Thr
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2068T>A
  hgvsp: ENSP00000391612.2:p.Ser690Thr
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2056T>A
  hgvsp: ENSP00000452787.1:p.Ser686Thr
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2116T>A
  hgvsp: ENSP00000319248.9:p.Ser706Thr
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2374T>A
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16849
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6735
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32103
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2081
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ser707Thr
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff

10-31810396-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810396
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810396
    reference: chr 10
allele count: 1
allele frequency: 8.251097395953662e-6
allele num: 121196
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.1932C>G
  hgvsp: ENST00000542815.3:c.1932C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2073C>G
  hgvsp: ENST00000560721.2:c.2073C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2202C>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2391C>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2273C>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.2846C>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2136C>G
  hgvsp: ENST00000361642.5:c.2136C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2133C>G
  hgvsp: ENST00000320985.10:c.2133C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2085C>G
  hgvsp: ENST00000446923.2:c.2085C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2230C>G
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16879
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32108
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6728
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2080
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser712Ser
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: DP
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

10-31810409-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810409
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810409
    reference: chr 10
allele count: 1
allele frequency: 8.250552787036732e-6
allele num: 121204
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2146A>G
  hgvsp: ENSP00000319248.9:p.Thr716Ala
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2086A>G
  hgvsp: ENSP00000452787.1:p.Thr696Ala
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2215A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2404A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2243A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.1945A>G
  hgvsp: ENSP00000444891.2:p.Thr649Ala
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2098A>G
  hgvsp: ENSP00000391612.2:p.Thr700Ala
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2149A>G
  hgvsp: ENSP00000354487.5:p.Thr717Ala
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.2859A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2286A>G
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32120
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2074
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6728
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16886
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42190
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr717Ala
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

10-31810414-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810414
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810414
    reference: chr 10
allele count: 1
allele frequency: 8.250144377526608e-6
allele num: 121210
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.1950G>A
  hgvsp: ENST00000542815.3:c.1950G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2248G>A
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2091G>A
  hgvsp: ENST00000560721.2:c.2091G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2151G>A
  hgvsp: ENST00000320985.10:c.2151G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2291G>A
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2154G>A
  hgvsp: ENST00000361642.5:c.2154G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2103G>A
  hgvsp: ENST00000446923.2:c.2103G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2220G>A
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.2864G>A
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2409G>A
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2074
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16892
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32122
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6731
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7568
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gln718Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum

10-31810416-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810416
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810416
    reference: chr 10
allele count: 1
allele frequency: 8.250688932525866e-6
allele num: 121202
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2222G>A
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2105G>A
  hgvsp: ENSP00000391612.2:p.Gly702Asp
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2250G>A
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.2866G>A
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.1952G>A
  hgvsp: ENSP00000444891.2:p.Gly651Asp
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2156G>A
  hgvsp: ENSP00000354487.5:p.Gly719Asp
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2093G>A
  hgvsp: ENSP00000452787.1:p.Gly698Asp
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2153G>A
  hgvsp: ENSP00000319248.9:p.Gly718Asp
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2411G>A
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2293G>A
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16888
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6733
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2076
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32147
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2453
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gly719Asp
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: G
site quality: QD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

10-31810427-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810427
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810427
    reference: chr 10
allele count: 1
allele frequency: 8.249463784853985e-6
allele num: 121220
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2233A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2164A>G
  hgvsp: ENSP00000319248.9:p.Thr722Ala
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2167A>G
  hgvsp: ENSP00000354487.5:p.Thr723Ala
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.2877A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2104A>G
  hgvsp: ENSP00000452787.1:p.Thr702Ala
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2422A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2116A>G
  hgvsp: ENSP00000391612.2:p.Thr706Ala
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.1963A>G
  hgvsp: ENSP00000444891.2:p.Thr655Ala
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2304A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2261A>G
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32164
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6736
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2072
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16891
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42273
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Thr723Ala
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

10-31810442-CAAG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810442
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810439
    reference: chr 10
allele count: 1
allele frequency: 8.247558722618106e-6
allele num: 121248
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2187_2189delAGA
  hgvsp: ENSP00000354487.5:p.Glu730del
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2184_2186delAGA
  hgvsp: ENSP00000319248.9:p.Glu729del
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2136_2138delAGA
  hgvsp: ENSP00000391612.2:p.Glu713del
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.2897_2899delAGA
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2124_2126delAGA
  hgvsp: ENSP00000452787.1:p.Glu709del
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2253_2255delAGA
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2281_2283delAGA
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.1983_1985delAGA
  hgvsp: ENSP00000444891.2:p.Glu662del
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2442_2444delAGA
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2324_*2326delAGA
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32186
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2080
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16910
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6730
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Glu730del
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
reference allele: CAAG
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: QD

10-31810445-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810445
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810445
    reference: chr 10
allele count: 2
allele frequency: 1.649566164098842e-5
allele num: 121244
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2182G>C
  hgvsp: ENSP00000319248.9:p.Glu728Gln
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2185G>C
  hgvsp: ENSP00000354487.5:p.Glu729Gln
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2251G>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2134G>C
  hgvsp: ENSP00000391612.2:p.Glu712Gln
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2322G>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.2895G>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2122G>C
  hgvsp: ENSP00000452787.1:p.Glu708Gln
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.1981G>C
  hgvsp: ENSP00000444891.2:p.Glu661Gln
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2279G>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2440G>C
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16913
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2081
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6730
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32194
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1518
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Glu729Gln
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/10-31810447-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810447
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810447
    reference: chr 10
allele count: 2
allele frequency: 1.649484536082474e-5
allele num: 121250
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2124A>C
  hgvsp: ENSP00000452787.1:p.Glu708Asp
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2253A>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2442A>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.2897A>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2184A>C
  hgvsp: ENSP00000319248.9:p.Glu728Asp
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2136A>C
  hgvsp: ENSP00000391612.2:p.Glu712Asp
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2281A>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2187A>C
  hgvsp: ENSP00000354487.5:p.Glu729Asp
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.1983A>C
  hgvsp: ENSP00000444891.2:p.Glu661Asp
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2324A>C
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16911
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2080
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6735
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32204
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 805
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Glu729Asp
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum

10-31810458-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810458
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810458
    reference: chr 10
allele count: 2
allele frequency: 1.649375711293276e-5
allele num: 121258
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2198T>G
  hgvsp: ENSP00000354487.5:p.Val733Gly
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2135T>G
  hgvsp: ENSP00000452787.1:p.Val712Gly
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2292T>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2147T>G
  hgvsp: ENSP00000391612.2:p.Val716Gly
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2335T>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2195T>G
  hgvsp: ENSP00000319248.9:p.Val732Gly
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.1994T>G
  hgvsp: ENSP00000444891.2:p.Val665Gly
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2264T>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2453T>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.2908T>G
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16927
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6741
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32200
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2080
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Val733Gly
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

10-31810466-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810466
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810466
    reference: chr 10
allele count: 33
allele frequency: 2.721380152067424e-4
allele num: 121262
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2203C>G
  hgvsp: ENSP00000319248.9:p.Leu735Val
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2143C>G
  hgvsp: ENSP00000452787.1:p.Leu715Val
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2343C>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2300C>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.2916C>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2461C>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2206C>G
  hgvsp: ENSP00000354487.5:p.Leu736Val
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2155C>G
  hgvsp: ENSP00000391612.2:p.Leu719Val
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.2002C>G
  hgvsp: ENSP00000444891.2:p.Leu668Val
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2272C>G
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2076
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32215
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16929
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6730
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 9.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2457
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42377
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Leu736Val
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS

10-31810483-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810483
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810483
    reference: chr 10
allele count: 2
allele frequency: 1.649212501030758e-5
allele num: 121270
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2160A>T
  hgvsp: ENST00000560721.2:c.2160A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2478A>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.2019A>T
  hgvsp: ENST00000542815.3:c.2019A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.2933A>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2360A>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2317A>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2223A>T
  hgvsp: ENST00000361642.5:c.2223A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2172A>T
  hgvsp: ENST00000446923.2:c.2172A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2220A>T
  hgvsp: ENST00000320985.10:c.2220A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2289A>T
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16950
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2082
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6738
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32204
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2456
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro741Pro
num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD

10-31810502-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810502
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810502
    reference: chr 10
allele count: 25
allele frequency: 2.061515626288447e-4
allele num: 121270
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2379T>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2336T>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2242T>C
  hgvsp: ENST00000361642.5:c.2242T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.2038T>C
  hgvsp: ENST00000542815.3:c.2038T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2191T>C
  hgvsp: ENST00000446923.2:c.2191T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2308T>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2497T>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.2952T>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2239T>C
  hgvsp: ENST00000320985.10:c.2239T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2179T>C
  hgvsp: ENST00000560721.2:c.2179T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 32160
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2081
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6725
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 9.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16950
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2556
  bin: 9.75e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu748Leu
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

10-31810514-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810514
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810514
    reference: chr 10
allele count: 166
allele frequency: 1.368643229338434e-3
allele num: 121288
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2251A>G
  hgvsp: ENSP00000319248.9:p.Thr751Ala
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.2050A>G
  hgvsp: ENSP00000444891.2:p.Thr684Ala
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.2964A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2509A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2191A>G
  hgvsp: ENSP00000452787.1:p.Thr731Ala
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2203A>G
  hgvsp: ENSP00000391612.2:p.Thr735Ala
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2320A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2391A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2254A>G
  hgvsp: ENSP00000354487.5:p.Thr752Ala
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2348A>G
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 9.75e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 16935
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 32052
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2080
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 6705
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2438
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Thr752Ala
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: African
reference allele: A
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD

10-31810517-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810517
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810517
    reference: chr 10
allele count: 4
allele frequency: 3.298098646130506e-5
allele num: 121282
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2206A>G
  hgvsp: ENSP00000391612.2:p.Ile736Val
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.2967A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2351A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.2053A>G
  hgvsp: ENSP00000444891.2:p.Ile685Val
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2394A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2257A>G
  hgvsp: ENSP00000354487.5:p.Ile753Val
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2194A>G
  hgvsp: ENSP00000452787.1:p.Ile732Val
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2254A>G
  hgvsp: ENSP00000319248.9:p.Ile752Val
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2512A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2323A>G
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32069
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6744
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2096
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17007
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2524
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ile753Val
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD

10-31810525-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810525
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810525
    reference: chr 10
allele count: 1
allele frequency: 8.24551856066228e-6
allele num: 121278
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2520T>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2262T>C
  hgvsp: ENST00000320985.10:c.2262T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2331T>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2202T>C
  hgvsp: ENST00000560721.2:c.2202T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.2975T>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.2061T>C
  hgvsp: ENST00000542815.3:c.2061T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2402T>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2214T>C
  hgvsp: ENST00000446923.2:c.2214T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2359T>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2265T>C
  hgvsp: ENST00000361642.5:c.2265T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32072
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2097
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17003
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6749
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 644
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ser755Ser
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

10-31810539-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810539
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810539
    reference: chr 10
allele count: 1
allele frequency: 8.246198502490351e-6
allele num: 121268
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.2989G>A
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2228G>A
  hgvsp: ENSP00000391612.2:p.Ser743Asn
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2279G>A
  hgvsp: ENSP00000354487.5:p.Ser760Asn
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.2075G>A
  hgvsp: ENSP00000444891.2:p.Ser692Asn
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2276G>A
  hgvsp: ENSP00000319248.9:p.Ser759Asn
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2534G>A
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2216G>A
  hgvsp: ENSP00000452787.1:p.Ser739Asn
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2416G>A
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2373G>A
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2345G>A
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17009
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2095
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32081
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6751
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2522
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser760Asn
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum

10-31810551-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810551
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810551
    reference: chr 10
allele count: 1
allele frequency: 8.246878556466378e-6
allele num: 121258
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.3001T>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2546T>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2291T>C
  hgvsp: ENSP00000354487.5:p.Val764Ala
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2385T>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2240T>C
  hgvsp: ENSP00000391612.2:p.Val747Ala
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.2087T>C
  hgvsp: ENSP00000444891.2:p.Val696Ala
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2228T>C
  hgvsp: ENSP00000452787.1:p.Val743Ala
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2288T>C
  hgvsp: ENSP00000319248.9:p.Val763Ala
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2428T>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2357T>C
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2100
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32065
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6753
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17023
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Val764Ala
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: African
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

10-31810554-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810554
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810554
    reference: chr 10
allele count: 1
allele frequency: 8.247286642694553e-6
allele num: 121252
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2431A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.2090A>G
  hgvsp: ENSP00000444891.2:p.Gln697Arg
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2291A>G
  hgvsp: ENSP00000319248.9:p.Gln764Arg
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2294A>G
  hgvsp: ENSP00000354487.5:p.Gln765Arg
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2243A>G
  hgvsp: ENSP00000391612.2:p.Gln748Arg
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2360A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2231A>G
  hgvsp: ENSP00000452787.1:p.Gln744Arg
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.3004A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2388A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2549A>G
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32062
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2100
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17024
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6758
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gln765Arg
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ReadPosRankSum

10-31810579-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810579
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810579
    reference: chr 10
allele count: 23
allele frequency: 1.896907216494845e-4
allele num: 121250
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2385C>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.2115C>T
  hgvsp: ENST00000542815.3:c.2115C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.3029C>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2256C>T
  hgvsp: ENST00000560721.2:c.2256C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2268C>T
  hgvsp: ENST00000446923.2:c.2268C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2413C>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2319C>T
  hgvsp: ENST00000361642.5:c.2319C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2456C>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2574C>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2316C>T
  hgvsp: ENST00000320985.10:c.2316C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17035
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2101
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6762
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 32027
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Cys773Cys
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum

10-31810580-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810580
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810580
    reference: chr 10
allele count: 3
allele frequency: 2.473981956424931e-5
allele num: 121262
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2575G>A
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2257G>A
  hgvsp: ENSP00000452787.1:p.Ala753Thr
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2269G>A
  hgvsp: ENSP00000391612.2:p.Ala757Thr
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2414G>A
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2317G>A
  hgvsp: ENSP00000319248.9:p.Ala773Thr
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2457G>A
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2386G>A
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2320G>A
  hgvsp: ENSP00000354487.5:p.Ala774Thr
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.2116G>A
  hgvsp: ENSP00000444891.2:p.Ala706Thr
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.3030G>A
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32017
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17047
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2104
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6769
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala774Thr
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

10-31810583-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810583
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810583
    reference: chr 10
allele count: 1
allele frequency: 8.24551856066228e-6
allele num: 121278
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2272A>G
  hgvsp: ENSP00000391612.2:p.Lys758Glu
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2460A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.2119A>G
  hgvsp: ENSP00000444891.2:p.Lys707Glu
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2417A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2260A>G
  hgvsp: ENSP00000452787.1:p.Lys754Glu
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2320A>G
  hgvsp: ENSP00000319248.9:p.Lys774Glu
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2323A>G
  hgvsp: ENSP00000354487.5:p.Lys775Glu
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2389A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.3033A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2578A>G
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32025
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17063
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6758
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2101
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Lys775Glu
num of homozygotes: 0
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: A
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/10-31810604-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810604
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810604
    reference: chr 10
allele count: 6
allele frequency: 4.946576968737634e-5
allele num: 121296
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2293A>C
  hgvsp: ENSP00000391612.2:p.Ser765Arg
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2481A>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2281A>C
  hgvsp: ENSP00000452787.1:p.Ser761Arg
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2599A>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2344A>C
  hgvsp: ENSP00000354487.5:p.Ser782Arg
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.2140A>C
  hgvsp: ENSP00000444891.2:p.Ser714Arg
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.3054A>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2438A>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2341A>C
  hgvsp: ENSP00000319248.9:p.Ser781Arg
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2410A>C
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6769
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2106
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32008
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17069
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser782Arg
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ

10-31810605-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810605
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810605
    reference: chr 10
allele count: 2
allele frequency: 1.649022129876983e-5
allele num: 121284
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2482G>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.3055G>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2439G>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.2141G>C
  hgvsp: ENSP00000444891.2:p.Ser714Thr
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2294G>C
  hgvsp: ENSP00000391612.2:p.Ser765Thr
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2411G>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2600G>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2345G>C
  hgvsp: ENSP00000354487.5:p.Ser782Thr
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2282G>C
  hgvsp: ENSP00000452787.1:p.Ser761Thr
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2342G>C
  hgvsp: ENSP00000319248.9:p.Ser781Thr
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32003
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17072
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6771
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser782Thr
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum

10-31810617-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810617
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810617
    reference: chr 10
allele count: 13
allele frequency: 1.071935090207461e-4
allele num: 121276
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2423A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2306A>G
  hgvsp: ENSP00000391612.2:p.Asp769Gly
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2494A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2451A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2294A>G
  hgvsp: ENSP00000452787.1:p.Asp765Gly
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2357A>G
  hgvsp: ENSP00000354487.5:p.Asp786Gly
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.2153A>G
  hgvsp: ENSP00000444891.2:p.Asp718Gly
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2354A>G
  hgvsp: ENSP00000319248.9:p.Asp785Gly
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.3067A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2612A>G
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6770
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31973
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17055
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 639
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2545
  bin: 9.75e1
  variant carriers: 13
hgvs: p.Asp786Gly
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

10-31810633-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810633
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810633
    reference: chr 10
allele count: 2
allele frequency: 1.649076517150396e-5
allele num: 121280
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2467A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.3083A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2310A>G
  hgvsp: ENST00000560721.2:c.2310A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2628A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2439A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2322A>G
  hgvsp: ENST00000446923.2:c.2322A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2370A>G
  hgvsp: ENST00000320985.10:c.2370A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.2169A>G
  hgvsp: ENST00000542815.3:c.2169A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2373A>G
  hgvsp: ENST00000361642.5:c.2373A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2510A>G
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31936
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6774
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17042
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Val791Val
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

10-31810640-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810640
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810640
    reference: chr 10
allele count: 1
allele frequency: 8.245110649384915e-6
allele num: 121284
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.3090A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.2176A>G
  hgvsp: ENSP00000444891.2:p.Ile726Val
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2635A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2517A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2474A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2377A>G
  hgvsp: ENSP00000319248.9:p.Ile793Val
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2380A>G
  hgvsp: ENSP00000354487.5:p.Ile794Val
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2446A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2317A>G
  hgvsp: ENSP00000452787.1:p.Ile773Val
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2329A>G
  hgvsp: ENSP00000391612.2:p.Ile777Val
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31928
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17029
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6777
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2105
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ile794Val
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Finnish)
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

10-31810648-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810648
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810648
    reference: chr 10
allele count: 1
allele frequency: 8.245790523937529e-6
allele num: 121274
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2385A>G
  hgvsp: ENST00000320985.10:c.2385A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2325A>G
  hgvsp: ENST00000560721.2:c.2325A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.3098A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.2184A>G
  hgvsp: ENST00000542815.3:c.2184A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2388A>G
  hgvsp: ENST00000361642.5:c.2388A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2337A>G
  hgvsp: ENST00000446923.2:c.2337A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2525A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2454A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2643A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2482A>G
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31922
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6776
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17018
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro796Pro
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: European (Finnish)
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

10-31810658-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810658
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810658
    reference: chr 10
allele count: 1
allele frequency: 8.244702778464837e-6
allele num: 121290
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2492C>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2653C>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2347C>G
  hgvsp: ENSP00000391612.2:p.Pro783Ala
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2395C>G
  hgvsp: ENSP00000319248.9:p.Pro799Ala
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2335C>G
  hgvsp: ENSP00000452787.1:p.Pro779Ala
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2535C>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2398C>G
  hgvsp: ENSP00000354487.5:p.Pro800Ala
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.2194C>G
  hgvsp: ENSP00000444891.2:p.Pro732Ala
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.3108C>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2464C>G
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31896
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6772
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17019
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2110
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro800Ala
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP

10-31810669-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810669
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810669
    reference: chr 10
allele count: 5
allele frequency: 4.123439278233189e-5
allele num: 121258
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2406C>T
  hgvsp: ENST00000320985.10:c.2406C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2358C>T
  hgvsp: ENST00000446923.2:c.2358C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.2205C>T
  hgvsp: ENST00000542815.3:c.2205C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.3119C>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2503C>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2409C>T
  hgvsp: ENST00000361642.5:c.2409C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2475C>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2664C>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2346C>T
  hgvsp: ENST00000560721.2:c.2346C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2546C>T
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2106
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6770
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17002
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31880
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2528
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ile803Ile
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ

10-31810670-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810670
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810670
    reference: chr 10
allele count: 4
allele frequency: 3.299458888742246e-5
allele num: 121232
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2410G>A
  hgvsp: ENSP00000354487.5:p.Ala804Thr
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2407G>A
  hgvsp: ENSP00000319248.9:p.Ala803Thr
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2347G>A
  hgvsp: ENSP00000452787.1:p.Ala783Thr
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2547G>A
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.3120G>A
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.2206G>A
  hgvsp: ENSP00000444891.2:p.Ala736Thr
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2476G>A
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2504G>A
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2359G>A
  hgvsp: ENSP00000391612.2:p.Ala787Thr
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2665G>A
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31867
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6773
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17000
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2107
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala804Thr
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

10-31810672-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810672
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810672
    reference: chr 10
allele count: 1
allele frequency: 8.247014580721778e-6
allele num: 121256
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2412T>C
  hgvsp: ENST00000361642.5:c.2412T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2409T>C
  hgvsp: ENST00000320985.10:c.2409T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.2208T>C
  hgvsp: ENST00000542815.3:c.2208T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2506T>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2361T>C
  hgvsp: ENST00000446923.2:c.2361T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.3122T>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2349T>C
  hgvsp: ENST00000560721.2:c.2349T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2549T>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2478T>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2667T>C
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6772
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31868
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2106
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16995
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1521
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ala804Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: Other
reference allele: T
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum

10-31810674-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810674
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810674
    reference: chr 10
allele count: 231
allele frequency: 1.905123214462442e-3
allele num: 121252
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2414T>C
  hgvsp: ENSP00000354487.5:p.Ile805Thr
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2351T>C
  hgvsp: ENSP00000452787.1:p.Ile784Thr
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2669T>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2551T>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.3124T>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.2210T>C
  hgvsp: ENSP00000444891.2:p.Ile737Thr
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2508T>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2411T>C
  hgvsp: ENSP00000319248.9:p.Ile804Thr
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2363T>C
  hgvsp: ENSP00000391612.2:p.Ile788Thr
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2480T>C
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 16963
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 9.75e1
  variant carriers: 164
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 31742
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6731
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2098
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 2751
  bin: 9.75e1
  variant carriers: 228
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ile805Thr
num of homozygotes: 3
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: African
reference allele: T
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD

10-31810678-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810678
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810678
    reference: chr 10
allele count: 1
allele frequency: 8.247422680412371e-6
allele num: 121250
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2555T>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.2214T>C
  hgvsp: ENST00000542815.3:c.2214T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.3128T>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2367T>C
  hgvsp: ENST00000446923.2:c.2367T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2418T>C
  hgvsp: ENST00000361642.5:c.2418T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2512T>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2415T>C
  hgvsp: ENST00000320985.10:c.2415T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2673T>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2355T>C
  hgvsp: ENST00000560721.2:c.2355T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2484T>C
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17043
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6794
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31770
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro806Pro
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ

10-31810679-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810679
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810679
    reference: chr 10
allele count: 304
allele frequency: 2.507175139379144e-3
allele num: 121252
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2416A>G
  hgvsp: ENSP00000319248.9:p.Thr806Ala
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2513A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2368A>G
  hgvsp: ENSP00000391612.2:p.Thr790Ala
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2419A>G
  hgvsp: ENSP00000354487.5:p.Thr807Ala
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2556A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.2215A>G
  hgvsp: ENSP00000444891.2:p.Thr739Ala
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2356A>G
  hgvsp: ENSP00000452787.1:p.Thr786Ala
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2674A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2485A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.3129A>G
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 4.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 31612
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 2113
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16990
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 5.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 6766
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 9.75e1
  variant carriers: 140
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.25e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 2515
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr807Ala
num of homozygotes: 2
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

10-31810691-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810691
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810691
    reference: chr 10
allele count: 1
allele frequency: 8.247694769311978e-6
allele num: 121246
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2431C>G
  hgvsp: ENSP00000354487.5:p.Gln811Glu
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2568C>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2497C>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2428C>G
  hgvsp: ENSP00000319248.9:p.Gln810Glu
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.2227C>G
  hgvsp: ENSP00000444891.2:p.Gln743Glu
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2368C>G
  hgvsp: ENSP00000452787.1:p.Gln790Glu
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2380C>G
  hgvsp: ENSP00000391612.2:p.Gln794Glu
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2686C>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2525C>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.3141C>G
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17107
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6820
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31641
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2131
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gln811Glu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/10-31810692-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810692
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810692
    reference: chr 10
allele count: 4
allele frequency: 3.298969072164949e-5
allele num: 121250
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2569A>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2687A>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.3142A>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2381A>C
  hgvsp: ENSP00000391612.2:p.Gln794Pro
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2429A>C
  hgvsp: ENSP00000319248.9:p.Gln810Pro
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2369A>C
  hgvsp: ENSP00000452787.1:p.Gln790Pro
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.2228A>C
  hgvsp: ENSP00000444891.2:p.Gln743Pro
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2498A>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2526A>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2432A>C
  hgvsp: ENSP00000354487.5:p.Gln811Pro
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31659
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17104
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6812
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2131
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gln811Pro
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ

10-31810692-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810692
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810692
    reference: chr 10
allele count: 1
allele frequency: 8.247422680412371e-6
allele num: 121250
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2569A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2429A>G
  hgvsp: ENSP00000319248.9:p.Gln810Arg
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2369A>G
  hgvsp: ENSP00000452787.1:p.Gln790Arg
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.3142A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2526A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2381A>G
  hgvsp: ENSP00000391612.2:p.Gln794Arg
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2687A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.2228A>G
  hgvsp: ENSP00000444891.2:p.Gln743Arg
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2498A>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2432A>G
  hgvsp: ENSP00000354487.5:p.Gln811Arg
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6812
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2131
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17104
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31659
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42148
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gln811Arg
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum

10-31810705-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810705
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810705
    reference: chr 10
allele count: 32
allele frequency: 2.639784857534111e-4
allele num: 121222
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2582C>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2700C>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2445C>T
  hgvsp: ENST00000361642.5:c.2445C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.2241C>T
  hgvsp: ENST00000542815.3:c.2241C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2539C>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2442C>T
  hgvsp: ENST00000320985.10:c.2442C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.3155C>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2394C>T
  hgvsp: ENST00000446923.2:c.2394C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2382C>T
  hgvsp: ENST00000560721.2:c.2382C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2511C>T
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17052
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6765
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31675
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2549
  bin: 9.75e1
  variant carriers: 30
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ile815Ile
num of homozygotes: 1
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

10-31810706-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810706
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810706
    reference: chr 10
allele count: 1
allele frequency: 8.25000825000825e-6
allele num: 121212
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2583G>A
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.3156G>A
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.2242G>A
  hgvsp: ENSP00000444891.2:p.Val748Met
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2395G>A
  hgvsp: ENSP00000391612.2:p.Val799Met
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2446G>A
  hgvsp: ENSP00000354487.5:p.Val816Met
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2443G>A
  hgvsp: ENSP00000319248.9:p.Val815Met
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2701G>A
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2540G>A
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2383G>A
  hgvsp: ENSP00000452787.1:p.Val795Met
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2512G>A
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17061
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31693
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6755
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2429
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Val816Met
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP

10-31810717-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810717
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810717
    reference: chr 10
allele count: 1
allele frequency: 8.249736008447729e-6
allele num: 121216
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2712T>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2457T>G
  hgvsp: ENST00000361642.5:c.2457T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2551T>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2454T>G
  hgvsp: ENST00000320985.10:c.2454T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2594T>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.3167T>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2523T>G
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.2253T>G
  hgvsp: ENST00000542815.3:c.2253T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2394T>G
  hgvsp: ENST00000560721.2:c.2394T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2406T>G
  hgvsp: ENST00000446923.2:c.2406T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2100
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6679
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31793
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17016
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala819Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: African
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum

10-31810732-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810732
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810732
    reference: chr 10
allele count: 1
allele frequency: 8.25082508250825e-6
allele num: 121200
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2421T>C
  hgvsp: ENST00000446923.2:c.2421T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2727T>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2538T>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2469T>C
  hgvsp: ENST00000320985.10:c.2469T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2566T>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2472T>C
  hgvsp: ENST00000361642.5:c.2472T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.2268T>C
  hgvsp: ENST00000542815.3:c.2268T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2609T>C
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2409T>C
  hgvsp: ENST00000560721.2:c.2409T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.3182T>C
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2074
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16906
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6600
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31867
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Val824Val
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: FS

10-31810733-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810733
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810733
    reference: chr 10
allele count: 1
allele frequency: 8.252323028932645e-6
allele num: 121178
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2539C>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.2269C>T
  hgvsp: ENSP00000444891.2:p.Pro757Ser
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2728C>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2473C>T
  hgvsp: ENSP00000354487.5:p.Pro825Ser
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2567C>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2422C>T
  hgvsp: ENSP00000391612.2:p.Pro808Ser
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2610C>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2470C>T
  hgvsp: ENSP00000319248.9:p.Pro824Ser
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2410C>T
  hgvsp: ENSP00000452787.1:p.Pro804Ser
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.3183C>T
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2075
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31877
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6595
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16888
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7390
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro825Ser
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

10-31810745-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810745
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810745
    reference: chr 10
allele count: 4
allele frequency: 3.302182742792986e-5
allele num: 121132
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2482G>A
  hgvsp: ENSP00000319248.9:p.Ala828Thr
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2485G>A
  hgvsp: ENSP00000354487.5:p.Ala829Thr
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.3195G>A
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2740G>A
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2434G>A
  hgvsp: ENSP00000391612.2:p.Ala812Thr
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.2281G>A
  hgvsp: ENSP00000444891.2:p.Ala761Thr
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2622G>A
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2579G>A
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2551G>A
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2422G>A
  hgvsp: ENSP00000452787.1:p.Ala808Thr
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32062
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16685
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6473
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2059
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 784
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala829Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
population: European (Finnish)
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

10-31810745-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810745
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810745
    reference: chr 10
allele count: 3
allele frequency: 2.476637057094739e-5
allele num: 121132
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2422G>T
  hgvsp: ENSP00000452787.1:p.Ala808Ser
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2434G>T
  hgvsp: ENSP00000391612.2:p.Ala812Ser
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2579G>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2485G>T
  hgvsp: ENSP00000354487.5:p.Ala829Ser
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.2281G>T
  hgvsp: ENSP00000444891.2:p.Ala761Ser
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2482G>T
  hgvsp: ENSP00000319248.9:p.Ala828Ser
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2740G>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2551G>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2622G>T
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.3195G>T
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32062
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2059
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16685
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6473
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7346
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ala829Ser
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

10-31810747-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31810747
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31810747
    reference: chr 10
allele count: 9
allele frequency: 7.430401902182887e-5
allele num: 121124
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000444891
  ensembl transcript: ENST00000542815
  gene symbol: ZEB1
  hgvsc: ENST00000542815.3:c.2283G>A
  hgvsp: ENST00000542815.3:c.2283G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000319248
  ensembl transcript: ENST00000320985
  gene symbol: ZEB1
  hgvsc: ENST00000320985.10:c.2484G>A
  hgvsp: ENST00000320985.10:c.2484G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000558655
  gene symbol: ZEB1
  hgvsc: ENST00000558655.1:n.2581G>A
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000391612
  ensembl transcript: ENST00000446923
  gene symbol: ZEB1
  hgvsc: ENST00000446923.2:c.2436G>A
  hgvsp: ENST00000446923.2:c.2436G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000559858
  gene symbol: ZEB1
  hgvsc: ENST00000559858.1:n.2553G>A
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000542879
  gene symbol: ZEB1
  hgvsc: ENST00000542879.1:n.2742G>A
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000405958
  ensembl transcript: ENST00000437844
  gene symbol: ZEB1
  hgvsc: ENST00000437844.2:c.*2624G>A
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148516
  ensembl transcript: ENST00000488625
  gene symbol: ZEB1
  hgvsc: ENST00000488625.2:n.3197G>A
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000452787
  ensembl transcript: ENST00000560721
  gene symbol: ZEB1
  hgvsc: ENST00000560721.2:c.2424G>A
  hgvsp: ENST00000560721.2:c.2424G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148516
  ensembl protein: ENSP00000354487
  ensembl transcript: ENST00000361642
  gene symbol: ZEB1
  hgvsc: ENST00000361642.5:c.2487G>A
  hgvsp: ENST00000361642.5:c.2487G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11642
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6465
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2052
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16670
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 32100
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ala829Ala
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 7586
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42059
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2448
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2414
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2510
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 641
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 788
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.513317191283293e-4
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500015000150001e-5
allele num: 66666
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.34e0

MQRankSum
type: SiteQuality
SIO_000300: -8.080000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.18e-1

DP
type: SiteQuality
SIO_000300: 1.590008e6

QD
type: SiteQuality
SIO_000300: 1.26e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.718e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.606e0

GenotypeQuality
all individuals: 187
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2442
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7578
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42014
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2411
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 27
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1510
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 788
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 642
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66670
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.624639076034648e-5
allele num: 10390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.38e-1

MQ
type: SiteQuality
SIO_000300: 5.875e1

QD
type: SiteQuality
SIO_000300: 6.72e0

DP
type: SiteQuality
SIO_000300: 1.590072e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

FS
type: SiteQuality
SIO_000300: 9.148999999999999e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.21e0

VQSLOD
type: SiteQuality
SIO_000300: -1.701e0

MQRankSum
type: SiteQuality
SIO_000300: -3.74e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.3e-1

GenotypeQuality
all individuals: 95
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2415
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1516
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42024
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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East Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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MQRankSum
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QD
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InbreedingCoeff
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VQSLOD
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MQ
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FS
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BaseQRankSum
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ClippingRankSum
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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African
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European (Non-Finnish)
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South Asian
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East Asian
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Other
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DP
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ClippingRankSum
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MQ
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ReadPosRankSum
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QD
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MQRankSum
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VQSLOD
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BaseQRankSum
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FS
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Other
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European (Non-Finnish)
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Latino
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East Asian
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African
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South Asian
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FS
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MQ
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DP
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BaseQRankSum
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ReadPosRankSum
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QD
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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Other
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66652
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European (Finnish)
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South Asian
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MQRankSum
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ReadPosRankSum
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QD
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VQSLOD
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DP
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MQ
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BaseQRankSum
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FS
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InbreedingCoeff
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66634
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Latino
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African
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Other
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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MQRankSum
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QD
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MQ
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DP
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FS
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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South Asian
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Latino
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African
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Other
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European (Non-Finnish)
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allele frequency: 7.503902029055108e-5
allele num: 66632
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ClippingRankSum
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VQSLOD
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DP
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FS
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BaseQRankSum
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MQ
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InbreedingCoeff
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MQRankSum
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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South Asian
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European (Finnish)
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Other
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African
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European (Non-Finnish)
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East Asian
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FS
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BaseQRankSum
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MQ
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InbreedingCoeff
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DP
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ReadPosRankSum
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QD
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VQSLOD
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ClippingRankSum
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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African
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European (Finnish)
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South Asian
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InbreedingCoeff
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ClippingRankSum
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DP
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ReadPosRankSum
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MQRankSum
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QD
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FS
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BaseQRankSum
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VQSLOD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
all individuals: 646
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.501800720288115e-5
allele num: 66640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.978e1

QD
type: SiteQuality
SIO_000300: 1.425e1

VQSLOD
type: SiteQuality
SIO_000300: 9.49e-1

DP
type: SiteQuality
SIO_000300: 1.591506e6

MQRankSum
type: SiteQuality
SIO_000300: 5.26e-1

FS
type: SiteQuality
SIO_000300: 3.923e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -4.662e0

GenotypeQuality
all individuals: 76
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 692

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2399
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GenotypeQuality
all individuals: 72
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 5
allele frequency: 5.506607929515419e-3
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

Latino
type: Population
allele count: 37
allele frequency: 3.210690732384589e-3
allele num: 11524
num of homozygotes: 0

African
type: Population
allele count: 650
allele frequency: 6.257219869079707e-2
allele num: 10388
num of homozygotes: 16

European (Non-Finnish)
type: Population
allele count: 16
allele frequency: 2.401176576522496e-4
allele num: 66634
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06060606060606e-5
allele num: 16500
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.974e1

MQRankSum
type: SiteQuality
SIO_000300: 2.05e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.69e-1

QD
type: SiteQuality
SIO_000300: 1.44e1

FS
type: SiteQuality
SIO_000300: 5.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.94e0

DP
type: SiteQuality
SIO_000300: 1.623656e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.4e-2

GenotypeQuality
all individuals: 62
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 796
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42079
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500600240096038e-5
allele num: 66640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.82e-1

QD
type: SiteQuality
SIO_000300: 1.463e1

FS
type: SiteQuality
SIO_000300: 6.62e0

VQSLOD
type: SiteQuality
SIO_000300: 5.19e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.179999999999999e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.600436e6

ClippingRankSum
type: SiteQuality
SIO_000300: 9.419999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.91e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeQuality
all individuals: 22
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variant carriers: 0

GenotypeQuality
all individuals: 78
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 22

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 32
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variant carriers: 0

GenotypeQuality
all individuals: 42102
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66644
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

African
type: Population
allele count: 22
allele frequency: 2.117828263380824e-3
allele num: 10388
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

DP
type: SiteQuality
SIO_000300: 1.601329e6

MQ
type: SiteQuality
SIO_000300: 5.976e1

VQSLOD
type: SiteQuality
SIO_000300: 3.8e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.88e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.776e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.3e-1

QD
type: SiteQuality
SIO_000300: 1.251e1

GenotypeQuality
all individuals: 2522
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 186
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1512
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2436
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.166044776119403e-4
allele num: 8576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.8e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

DP
type: SiteQuality
SIO_000300: 1.601329e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.88e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.776e0

MQ
type: SiteQuality
SIO_000300: 5.976e1

QD
type: SiteQuality
SIO_000300: 1.251e1

MQRankSum
type: SiteQuality
SIO_000300: -1.3e-1

GenotypeQuality
all individuals: 42113
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 37
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 63
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variant carriers: 0

GenotypeQuality
all individuals: 2520
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.676036786395974e-5
allele num: 11526
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.88e-1

FS
type: SiteQuality
SIO_000300: 5.09e0

QD
type: SiteQuality
SIO_000300: 1.511e1

VQSLOD
type: SiteQuality
SIO_000300: -1.5e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.289e0

MQ
type: SiteQuality
SIO_000300: 5.807e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.08e-1

DP
type: SiteQuality
SIO_000300: 1.600598e6

GenotypeQuality
all individuals: 7556
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 31
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 800
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2518
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66638
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.329916123019571e-4
allele num: 8584
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.976e1

MQRankSum
type: SiteQuality
SIO_000300: 3.07e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.5e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 8.680999999999999e0

DP
type: SiteQuality
SIO_000300: 1.60089e6

QD
type: SiteQuality
SIO_000300: 1.205e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.26e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.62e-1

GenotypeQuality
all individuals: 7542
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2679
bin: 9.75e1
variant carriers: 151

GenotypeQuality
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GenotypeQuality
all individuals: 2502
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GenotypeQuality
all individuals: 47
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GenotypeQuality
all individuals: 1510
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

East Asian
type: Population
allele count: 148
allele frequency: 1.722933643771828e-2
allele num: 8590
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.303964757709251e-3
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66638
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.06e-1

QD
type: SiteQuality
SIO_000300: 1.338e1

MQRankSum
type: SiteQuality
SIO_000300: 4.9e-1

DP
type: SiteQuality
SIO_000300: 1.609434e6

BaseQRankSum
type: SiteQuality
SIO_000300: 8.85e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.63e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.55e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

GenotypeQuality
all individuals: 17
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7563
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1515
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 650
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2446
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 802
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66638
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.626492106276473e-5
allele num: 10388
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.38e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.97e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.98e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

FS
type: SiteQuality
SIO_000300: 3.465e0

QD
type: SiteQuality
SIO_000300: 1.612e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.13e-1

DP
type: SiteQuality
SIO_000300: 1.601854e6

GenotypeQuality
all individuals: 14
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2543
bin: 9.75e1
variant carriers: 3

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66632
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.603262755987504e-4
allele num: 11524
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.502e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.42e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.71e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.919999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 5.976e1

FS
type: SiteQuality
SIO_000300: 1.833e0

DP
type: SiteQuality
SIO_000300: 1.602333e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.0e-2

GenotypeQuality
all individuals: 72
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2521
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 804
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1513
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7570
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500780405811022e-5
allele num: 66632
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.12e-1

FS
type: SiteQuality
SIO_000300: 5.504e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.57e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.56e-1

QD
type: SiteQuality
SIO_000300: 1.447e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 2.27e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.17e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.602709e6

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2541
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 68
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 7572
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 651
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variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 2.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.622786759045419e-5
allele num: 10392
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.803e0

DP
type: SiteQuality
SIO_000300: 1.602767e6

FS
type: SiteQuality
SIO_000300: 3.35e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

QD
type: SiteQuality
SIO_000300: 1.295e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.79e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.92e0

MQRankSum
type: SiteQuality
SIO_000300: 3.8e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.46e-1

GenotypeQuality
all individuals: 647
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1516
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50073536032656e-5
allele num: 66634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.603051e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

QD
type: SiteQuality
SIO_000300: 1.244e1

MQ
type: SiteQuality
SIO_000300: 5.94e1

VQSLOD
type: SiteQuality
SIO_000300: 1.52e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e0

MQRankSum
type: SiteQuality
SIO_000300: 9.03e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.155e0

FS
type: SiteQuality
SIO_000300: 6.725e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.6e-1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 17
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GenotypeQuality
all individuals: 12
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GenotypeQuality
all individuals: 34
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1514
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.13e0

FS
type: SiteQuality
SIO_000300: 2.221e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.429999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.603118e6

VQSLOD
type: SiteQuality
SIO_000300: 5.28e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.69e-1

QD
type: SiteQuality
SIO_000300: 1.391e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.67e-1

MQ
type: SiteQuality
SIO_000300: 5.906e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 805
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2463
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500915558490679e-5
allele num: 66626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.60323e6

FS
type: SiteQuality
SIO_000300: 2.993e0

MQ
type: SiteQuality
SIO_000300: 5.874e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.435e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e0

MQRankSum
type: SiteQuality
SIO_000300: 6.15e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 1.395e1

VQSLOD
type: SiteQuality
SIO_000300: -6.611e-1

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1517
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2519
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
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allele count: 1
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African
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European (Non-Finnish)
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European (Finnish)
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QD
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MQ
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ClippingRankSum
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DP
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VQSLOD
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FS
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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South Asian
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European (Finnish)
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Latino
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East Asian
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African
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Other
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MQRankSum
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MQ
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FS
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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DP
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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East Asian
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European (Finnish)
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Latino
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African
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Other
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FS
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DP
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MQRankSum
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MQ
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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Other
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African
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South Asian
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East Asian
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VQSLOD
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QD
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ReadPosRankSum
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MQ
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BaseQRankSum
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MQRankSum
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FS
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ClippingRankSum
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InbreedingCoeff
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Finnish)
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Latino
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European (Non-Finnish)
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East Asian
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African
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South Asian
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ReadPosRankSum
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FS
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MQ
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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DP
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Non-Finnish)
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European (Finnish)
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Other
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South Asian
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East Asian
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InbreedingCoeff
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FS
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BaseQRankSum
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MQRankSum
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QD
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ClippingRankSum
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MQ
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DP
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Non-Finnish)
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African
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East Asian
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South Asian
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Latino
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VQSLOD
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BaseQRankSum
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FS
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ReadPosRankSum
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DP
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MQ
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InbreedingCoeff
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QD
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MQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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South Asian
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East Asian
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European (Non-Finnish)
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MQRankSum
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ClippingRankSum
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FS
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InbreedingCoeff
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DP
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BaseQRankSum
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QD
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VQSLOD
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MQ
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ReadPosRankSum
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 804
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 33
allele frequency: 4.94841650671785e-4
allele num: 66688
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.87e-1

DP
type: SiteQuality
SIO_000300: 1.607458e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.96e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.45e0

MQ
type: SiteQuality
SIO_000300: 5.96e1

QD
type: SiteQuality
SIO_000300: 1.391e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -5.25e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 26
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1516
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 807
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.99868058054456e-5
allele num: 66696
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.49e-1

QD
type: SiteQuality
SIO_000300: 1.49e1

MQ
type: SiteQuality
SIO_000300: 5.974e1

MQRankSum
type: SiteQuality
SIO_000300: 5.02e-1

DP
type: SiteQuality
SIO_000300: 1.605257e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.18e0

FS
type: SiteQuality
SIO_000300: 8.202999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: 5.5e-2

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 807
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.997720866070893e-5
allele num: 66692
num of homozygotes: 0

East Asian
type: Population
allele count: 21
allele frequency: 2.44299674267101e-3
allele num: 8596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.4e-2

FS
type: SiteQuality
SIO_000300: 5.2e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.36e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

DP
type: SiteQuality
SIO_000300: 1.606801e6

MQRankSum
type: SiteQuality
SIO_000300: 4.96e-1

QD
type: SiteQuality
SIO_000300: 1.468e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.6e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 23
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 166

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1515
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 11
allele frequency: 1.663641863278887e-3
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 125
allele frequency: 1.874006776408504e-3
allele num: 66702
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.202643171806168e-3
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 10
allele frequency: 8.655011251514627e-4
allele num: 11554
num of homozygotes: 0

South Asian
type: Population
allele count: 15
allele frequency: 9.085402786190188e-4
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.883506343713956e-4
allele num: 10404
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.969e1

DP
type: SiteQuality
SIO_000300: 1.615811e6

VQSLOD
type: SiteQuality
SIO_000300: 3.91e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.17e0

FS
type: SiteQuality
SIO_000300: 5.19e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.51e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.55e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.86e-1

QD
type: SiteQuality
SIO_000300: 1.431e1

GenotypeQuality
all individuals: 1524
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
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variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
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GenotypeQuality
all individuals: 2539
bin: 9.75e1
variant carriers: 4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 16
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GenotypeQuality
all individuals: 2449
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 6
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 805
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.996821684507211e-5
allele num: 66702
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.7e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.28e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e0

DP
type: SiteQuality
SIO_000300: 1.606275e6

FS
type: SiteQuality
SIO_000300: 5.16e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.284e0

MQ
type: SiteQuality
SIO_000300: 5.955e1

QD
type: SiteQuality
SIO_000300: 1.484e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 22
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 7603
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.656509695290859e-5
allele num: 11552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66704
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.017e0

FS
type: SiteQuality
SIO_000300: 3.692e0

QD
type: SiteQuality
SIO_000300: 1.486e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.63e-1

MQ
type: SiteQuality
SIO_000300: 5.958e1

VQSLOD
type: SiteQuality
SIO_000300: 7.93e-1

DP
type: SiteQuality
SIO_000300: 1.606037e6

MQRankSum
type: SiteQuality
SIO_000300: -4.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.05e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.06e-1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66704
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.546e1

DP
type: SiteQuality
SIO_000300: 1.606216e6

FS
type: SiteQuality
SIO_000300: 3.75e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.72e-1

MQ
type: SiteQuality
SIO_000300: 5.981e1

MQRankSum
type: SiteQuality
SIO_000300: -3.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.974e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

VQSLOD
type: SiteQuality
SIO_000300: 6.919999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.53e-1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2539
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7599
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.661008141347653e-5
allele num: 11546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66696
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.8e-2

MQ
type: SiteQuality
SIO_000300: 5.947e1

QD
type: SiteQuality
SIO_000300: 1.186e1

DP
type: SiteQuality
SIO_000300: 1.606466e6

FS
type: SiteQuality
SIO_000300: 8.448e0

VQSLOD
type: SiteQuality
SIO_000300: -1.904e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 4.41e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.49e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.3e-1

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
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GenotypeQuality
all individuals: 8
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GenotypeQuality
all individuals: 18
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GenotypeQuality
all individuals: 806
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
all individuals: 643
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499295331194339e-5
allele num: 66698
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.432e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.02e0

MQRankSum
type: SiteQuality
SIO_000300: -4.5e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.81e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.870000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

DP
type: SiteQuality
SIO_000300: 1.606705e6

QD
type: SiteQuality
SIO_000300: 1.439e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

GenotypeQuality
all individuals: 2556
bin: 9.75e1
variant carriers: 23

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.165501165501166e-4
allele num: 8580
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 16
allele frequency: 2.398872529910942e-4
allele num: 66698
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.921968095329617e-4
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.732801940738174e-4
allele num: 11542
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.513317191283293e-4
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.26e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.044e0

DP
type: SiteQuality
SIO_000300: 1.608191e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-2

MQRankSum
type: SiteQuality
SIO_000300: 9.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.43e-1

QD
type: SiteQuality
SIO_000300: 1.287e1

MQ
type: SiteQuality
SIO_000300: 5.972e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.99e-1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.817300702689605e-4
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66702
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.36e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.299999999999999e-3

MQ
type: SiteQuality
SIO_000300: 5.979e1

FS
type: SiteQuality
SIO_000300: 7.279e0

VQSLOD
type: SiteQuality
SIO_000300: 2.87e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.39e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.06e-1

DP
type: SiteQuality
SIO_000300: 1.607431e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.5e-2

QD
type: SiteQuality
SIO_000300: 1.476e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2528
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variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.656509695290859e-5
allele num: 11552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66708
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.574999999999999e0

DP
type: SiteQuality
SIO_000300: 1.607161e6

QD
type: SiteQuality
SIO_000300: 1.599e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.71e-1

MQ
type: SiteQuality
SIO_000300: 5.931e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.71e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.0e-3

VQSLOD
type: SiteQuality
SIO_000300: -8.348e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.1e0

GenotypeQuality
all individuals: 2530
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1526
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2451
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.634161114476075e-4
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66714
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 9.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.28e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.76e-1

QD
type: SiteQuality
SIO_000300: 1.107e1

DP
type: SiteQuality
SIO_000300: 1.607812e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.610000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.201e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-2

MQ
type: SiteQuality
SIO_000300: 5.961e1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66710
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211387038158692e-4
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.05e-1

DP
type: SiteQuality
SIO_000300: 1.607492e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.84e0

FS
type: SiteQuality
SIO_000300: 9.342000000000001e0

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.974e1

QD
type: SiteQuality
SIO_000300: 1.101e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.89e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.17e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.21e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66710
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 13
allele frequency: 1.513387660069849e-3
allele num: 8590
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.356e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.15e0

MQRankSum
type: SiteQuality
SIO_000300: -1.4e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.66e-1

MQ
type: SiteQuality
SIO_000300: 5.95e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.999999999999999e-3

FS
type: SiteQuality
SIO_000300: 1.105e0

VQSLOD
type: SiteQuality
SIO_000300: 1.36e0

DP
type: SiteQuality
SIO_000300: 1.607928e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.14e-1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 2531
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.923816852635629e-4
allele num: 10396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66708
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.482e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.35e0

MQRankSum
type: SiteQuality
SIO_000300: -4.48e-1

FS
type: SiteQuality
SIO_000300: 1.099e0

MQ
type: SiteQuality
SIO_000300: 5.981e1

VQSLOD
type: SiteQuality
SIO_000300: 6.38e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.68e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.09e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 1.606791e6

GenotypeQuality
all individuals: 2442
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 639
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2530
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42285
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1522
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2536
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7580
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 803
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499160470136723e-5
allele num: 66704
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.606483e6

VQSLOD
type: SiteQuality
SIO_000300: 8.45e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

FS
type: SiteQuality
SIO_000300: 4.638e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.95e-1

MQ
type: SiteQuality
SIO_000300: 5.453e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.19e0

MQRankSum
type: SiteQuality
SIO_000300: -8.25e-1

QD
type: SiteQuality
SIO_000300: 4.84e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.2e-1

GenotypeQuality
all individuals: 42266
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2531
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66700
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.3e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.1e-1

DP
type: SiteQuality
SIO_000300: 1.606293e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.39e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.16e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.12e0

MQ
type: SiteQuality
SIO_000300: 5.919e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 1.382e1

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1520
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42246
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499205421126803e-5
allele num: 66702
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 4.47e-1

MQ
type: SiteQuality
SIO_000300: 5.928e1

FS
type: SiteQuality
SIO_000300: 4.702e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.593e0

MQRankSum
type: SiteQuality
SIO_000300: 1.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.5e-1

QD
type: SiteQuality
SIO_000300: 1.065e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.09e-1

DP
type: SiteQuality
SIO_000300: 1.606068e6

GenotypeQuality
all individuals: 639
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1520
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
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variant carriers: 0

GenotypeQuality
all individuals: 43
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
all individuals: 7562
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variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2540
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 76
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 802
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42211
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.655011251514626e-5
allele num: 11554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.059871530723549e-5
allele num: 16502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.49842555105713e-5
allele num: 66690
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.86e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.29e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.75e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.2e0

DP
type: SiteQuality
SIO_000300: 1.605825e6

QD
type: SiteQuality
SIO_000300: 9.140000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -2.99e-1

MQ
type: SiteQuality
SIO_000300: 5.941e1

GenotypeQuality
all individuals: 42
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
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variant carriers: 0

GenotypeQuality
all individuals: 42194
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variant carriers: 0

GenotypeQuality
all individuals: 802
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variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
all individuals: 2527
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variant carriers: 0

GenotypeQuality
all individuals: 1520
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variant carriers: 0

GenotypeQuality
all individuals: 33
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
all individuals: 53
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variant carriers: 0

GenotypeQuality
all individuals: 7555
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 639
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2541
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2436
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 1.732201628269531e-4
allele num: 11546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06060606060606e-5
allele num: 16500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499745043342632e-5
allele num: 66678
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.76e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.04e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.97e-1

FS
type: SiteQuality
SIO_000300: 5.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQ
type: SiteQuality
SIO_000300: 5.953e1

QD
type: SiteQuality
SIO_000300: 1.228e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.43e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.3e-1

DP
type: SiteQuality
SIO_000300: 1.605911e6

GenotypeQuality
all individuals: 803
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 47
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2526
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2439
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66692
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.106194690265487e-3
allele num: 904
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.605532e6

MQ
type: SiteQuality
SIO_000300: 5.92e1

VQSLOD
type: SiteQuality
SIO_000300: 9.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 1.374e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.85e0

FS
type: SiteQuality
SIO_000300: 6.95e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.34e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.7e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.95e-1

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2511
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 628
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GenotypeQuality
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GenotypeQuality
all individuals: 23
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GenotypeQuality
all individuals: 1511
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 802
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499565126113427e-5
allele num: 66686
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 230
allele frequency: 1.99168687218566e-2
allele num: 11548
num of homozygotes: 3

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.623646e6

MQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.06e0

QD
type: SiteQuality
SIO_000300: 1.557e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.04e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.74e-2

MQ
type: SiteQuality
SIO_000300: 5.972e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.33e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.26e0

GenotypeQuality
all individuals: 115
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 636
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 79
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GenotypeQuality
all individuals: 43
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variant carriers: 0

GenotypeQuality
all individuals: 813
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2534
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66686
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.619084263178146e-5
allele num: 10396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.48e0

MQRankSum
type: SiteQuality
SIO_000300: -2.287e0

VQSLOD
type: SiteQuality
SIO_000300: -1.897e0

QD
type: SiteQuality
SIO_000300: 1.077e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.9e0

DP
type: SiteQuality
SIO_000300: 1.606356e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.123e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 38
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2792
bin: 9.75e1
variant carriers: 302

GenotypeQuality
all individuals: 42006
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 805
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7529
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1514
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2429
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 51
allele frequency: 3.09053448066901e-3
allele num: 16502
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.535833081342606e-4
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 17
allele frequency: 1.472116383789401e-3
allele num: 11548
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.207505518763797e-3
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.619084263178146e-5
allele num: 10396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 230
allele frequency: 3.449103233159379e-3
allele num: 66684
num of homozygotes: 1

QD
type: SiteQuality
SIO_000300: 1.488e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.09e-1

MQ
type: SiteQuality
SIO_000300: 5.971e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 5.11e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.32e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.56e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.15e0

DP
type: SiteQuality
SIO_000300: 1.627509e6

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7568
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 809
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2530
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 637
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2531
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 42112
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2444
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1517
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499610101373643e-5
allele num: 66684
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.06e-1

MQ
type: SiteQuality
SIO_000300: 5.971e1

FS
type: SiteQuality
SIO_000300: 4.254e0

DP
type: SiteQuality
SIO_000300: 1.60692e6

VQSLOD
type: SiteQuality
SIO_000300: 8.699999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.8e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.65e0

QD
type: SiteQuality
SIO_000300: 1.371e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.91e-1

GenotypeQuality
all individuals: 56
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2446
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1517
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7571
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2531
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42148
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 808
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2536
bin: 9.75e1
variant carriers: 4

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.731601731601732e-4
allele num: 11550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.999310158663508e-5
allele num: 66682
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.66e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.607135e6

MQRankSum
type: SiteQuality
SIO_000300: -1.55e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.8e-2

QD
type: SiteQuality
SIO_000300: 1.266e1

VQSLOD
type: SiteQuality
SIO_000300: 3.26e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.823e0

MQ
type: SiteQuality
SIO_000300: 5.952e1

GenotypeQuality
all individuals: 2446
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 808
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7571
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2531
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2536
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1517
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.059871530723549e-5
allele num: 16502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66682
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.952e1

MQRankSum
type: SiteQuality
SIO_000300: -1.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.823e0

DP
type: SiteQuality
SIO_000300: 1.607135e6

VQSLOD
type: SiteQuality
SIO_000300: 3.26e0

QD
type: SiteQuality
SIO_000300: 1.266e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.66e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.8e-2

GenotypeQuality
all individuals: 105
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7542
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1513
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2522
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variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 637
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variant carriers: 1

GenotypeQuality
all individuals: 65
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
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variant carriers: 0

GenotypeQuality
all individuals: 42028
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
all individuals: 802
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variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2428
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 29
allele frequency: 4.349391085248065e-4
allele num: 66676
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.731002250302925e-4
allele num: 11554
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.63e-1

DP
type: SiteQuality
SIO_000300: 1.607319e6

MQ
type: SiteQuality
SIO_000300: 5.974e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.39e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.21e-1

QD
type: SiteQuality
SIO_000300: 1.364e1

VQSLOD
type: SiteQuality
SIO_000300: 4.23e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.26e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.64e-1

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
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variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 1512
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 634
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variant carriers: 0

GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
all individuals: 42070
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variant carriers: 0

GenotypeQuality
all individuals: 2530
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 66
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2522
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7543
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 802
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.626492106276473e-5
allele num: 10388
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66670
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.07e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 1.304e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.72e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 9.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.69e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.107e0

MQRankSum
type: SiteQuality
SIO_000300: 1.87e0

DP
type: SiteQuality
SIO_000300: 1.605204e6

GenotypeQuality
all individuals: 49
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 7.5e0
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GenotypeQuality
all individuals: 2404
bin: 7.25e1
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GenotypeQuality
all individuals: 2523
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 107
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
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variant carriers: 0

GenotypeQuality
all individuals: 7
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GenotypeQuality
all individuals: 7509
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GenotypeQuality
all individuals: 1500
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 795
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variant carriers: 0

GenotypeQuality
all individuals: 9
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GenotypeQuality
all individuals: 80
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2512
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42103
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499970000599988e-5
allele num: 66668
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -9.28e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.678e0

QD
type: SiteQuality
SIO_000300: 1.809e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 9.429999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.603033e6

FS
type: SiteQuality
SIO_000300: 5.21e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.37e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.29e0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
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GenotypeQuality
all individuals: 2487
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variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41983
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variant carriers: 0

GenotypeQuality
all individuals: 2518
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 625
bin: 8.75e1
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GenotypeQuality
all individuals: 89
bin: 5.25e1
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GenotypeQuality
all individuals: 107
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
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GenotypeQuality
all individuals: 7417
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GenotypeQuality
all individuals: 237
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1493
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 789
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2373
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06501698204755e-5
allele num: 16488
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66660
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.39e0

VQSLOD
type: SiteQuality
SIO_000300: -2.518e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.27e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.36e-1

DP
type: SiteQuality
SIO_000300: 1.599925e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.18e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.668e1

FS
type: SiteQuality
SIO_000300: 8.32e-1

GenotypeQuality
all individuals: 77
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2479
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 787
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2366
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 623
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2517
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1492
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41943
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5001500150015e-5
allele num: 66660
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.531e0

FS
type: SiteQuality
SIO_000300: 6.674e0

VQSLOD
type: SiteQuality
SIO_000300: -1.549e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.14e-2

MQRankSum
type: SiteQuality
SIO_000300: -4.32e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.383e0

QD
type: SiteQuality
SIO_000300: 1.513e1

MQ
type: SiteQuality
SIO_000300: 5.829e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.77e-1

DP
type: SiteQuality
SIO_000300: 1.59998e6

GenotypeQuality
all individuals: 2469
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 624
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1491
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2521
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 7346
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2354
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41589
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66630
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.428068471530897e-4
allele num: 16474
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.349e1

MQRankSum
type: SiteQuality
SIO_000300: -2.54e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.169999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.233e0

FS
type: SiteQuality
SIO_000300: 2.649e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.12e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.91e-1

DP
type: SiteQuality
SIO_000300: 1.596284e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.54e-1

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41589
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 784
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 624
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2469
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1491
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2521
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 195
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2354
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.502476361999099e-5
allele num: 66630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.596284e6

QD
type: SiteQuality
SIO_000300: 1.349e1

VQSLOD
type: SiteQuality
SIO_000300: 8.169999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.12e-2

FS
type: SiteQuality
SIO_000300: 2.649e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.233e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.91e-1