4-164466917-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164466917
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164466917
    reference: chr 4
allele count: 4
allele frequency: 3.31619963521804e-5
allele num: 120620
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.424-22T>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.424-22T>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.373-22T>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.*63-22T>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1192-22T>C
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5011
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5554
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7083
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6861
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4821
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6429
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6158
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2574
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2901
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3772
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2515
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1053
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6085
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2703
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1675
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2767
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37358
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD

4-164466919-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164466919
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164466919
    reference: chr 4
allele count: 2
allele frequency: 1.658429798666623e-5
allele num: 120596
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.424-24T>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.*63-24T>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1192-24T>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.424-24T>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.373-24T>C
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4773
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7082
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2508
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6863
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3772
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6158
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2901
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5010
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5546
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6425
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2515
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2915
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1416
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1674
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2679
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genotype quality: GenotypeQuality
  all individuals: 1090
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2763
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: A
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

http://identifiers.org/exac.variant/4-164466923-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164466923
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164466923
    reference: chr 4
allele count: 1
allele frequency: 8.301097405076952e-6
allele num: 120466
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.373-28G>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.424-28G>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.*63-28G>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.424-28G>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1192-28G>T
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5516
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5010
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2515
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2213
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4549
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7082
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6421
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2901
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
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genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 26
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genotype quality: GenotypeQuality
  all individuals: 80
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

4-164466924-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164466924
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164466924
    reference: chr 4
allele count: 2
allele frequency: 1.659861235600704e-5
allele num: 120492
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1192-29A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.*63-29A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.424-29A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.424-29A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.373-29A>G
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
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genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5492
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1673
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2914
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: African
reference allele: T
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

4-164466928-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164466928
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164466928
    reference: chr 4
allele count: 1
allele frequency: 8.304130474498016e-6
allele num: 120422
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.373-33A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1192-33A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.424-33A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.424-33A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.*63-33A>G
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1961
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7080
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2901
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 5.75e1
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genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5440
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6413
  bin: 3.75e1
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genotype depth: GenotypeDepth
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  bin: 1.25e1
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genotype depth: GenotypeDepth
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  bin: 6.25e1
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genotype depth: GenotypeDepth
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  bin: 2.75e1
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genotype depth: GenotypeDepth
  all individuals: 6158
  bin: 5.25e1
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genotype depth: GenotypeDepth
  all individuals: 507
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 9.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 785
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 537
  bin: 2.75e1
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genotype quality: GenotypeQuality
  all individuals: 1229
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 586
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genotype quality: GenotypeQuality
  all individuals: 99
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genotype quality: GenotypeQuality
  all individuals: 62
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1396
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD

4-164466930-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164466930
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164466930
    reference: chr 4
allele count: 2
allele frequency: 1.661626399920242e-5
allele num: 120364
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.373-35C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.*63-35C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.424-35C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.424-35C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1192-35C>T
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1870
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6406
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
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genotype depth: GenotypeDepth
  all individuals: 2899
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2516
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3772
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 8.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 663
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1240
  bin: 2.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 208
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genotype quality: GenotypeQuality
  all individuals: 37352
  bin: 9.75e1
  variant carriers: 2
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

4-164466936-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164466936
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164466936
    reference: chr 4
allele count: 2
allele frequency: 1.664391997603276e-5
allele num: 120164
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.373-41A>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.424-41A>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1192-41A>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.*63-41A>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.424-41A>C
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3772
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6157
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genotype depth: GenotypeDepth
  all individuals: 6859
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 5009
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2903
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  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
reference allele: T
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ

4-164466943-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164466943
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164466943
    reference: chr 4
allele count: 5
allele frequency: 4.16930722791101e-5
allele num: 119924
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.424-48A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.*63-48A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.424-48A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.373-48A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1192-48A>G
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3409
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 77
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  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

4-164477058-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164477058
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164477058
    reference: chr 4
allele count: 1
allele frequency: 9.297136481963555e-5
allele num: 10756
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1192-10163A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.373-10163A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.424-10163A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.*5A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.424-10163A>G
  variant of: http://identifiers.org/hgnc/26077
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
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genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
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genotype depth: GenotypeDepth
  all individuals: 2048
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genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
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genotype depth: GenotypeDepth
  all individuals: 1690
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genotype depth: GenotypeDepth
  all individuals: 103
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 875
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 77
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 9.25e1
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genotype quality: GenotypeQuality
  all individuals: 404
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
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genotype quality: GenotypeQuality
  all individuals: 432
  bin: 7.25e1
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genotype quality: GenotypeQuality
  all individuals: 997
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 5
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genotype quality: GenotypeQuality
  all individuals: 66
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1744
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

4-164477060-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164477060
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164477060
    reference: chr 4
allele count: 1
allele frequency: 9.295408068414203e-5
allele num: 10758
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.373-10165A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.424-10165A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.*3A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1192-10165A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.424-10165A>G
  variant of: http://identifiers.org/hgnc/26077
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2072
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1690
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1552
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 4.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 876
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 19
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 432
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1804
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 404
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genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

4-164477128-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164477128
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164477128
    reference: chr 4
allele count: 3
allele frequency: 2.788622420524261e-4
allele num: 10758
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.424-10233C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.373-10233C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.424-10233C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.373-3C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1192-10233C>T
  variant of: http://identifiers.org/hgnc/26077
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1692
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 548
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 77
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
  all individuals: 471
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2069
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hgvs: c.373-3C>T
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: QD

4-164477154-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164477154
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164477154
    reference: chr 4
allele count: 136
allele frequency: 1.267474370922647e-2
allele num: 10730
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.424-10259T>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.373-29T>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.424-10259T>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.373-10259T>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1192-10259T>C
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 410
  bin: 4.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
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  variant carriers: 23
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 2.5e0
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1062
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 9.75e1
  variant carriers: 132
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 548
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 3
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD

4-164477163-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164477163
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164477163
    reference: chr 4
allele count: 1
allele frequency: 9.337068160597572e-5
allele num: 10710
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.424-10268G>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1192-10268G>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.424-10268G>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.373-38G>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.373-10268G>C
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1387
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1123
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 420
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1636
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ

4-164477165-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164477165
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164477165
    reference: chr 4
allele count: 458
allele frequency: 4.276377217553688e-2
allele num: 10710
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.424-10270T>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1192-10270T>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.373-40T>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.424-10270T>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.373-10270T>C
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 2.75e1
  variant carriers: 77
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 1.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1461
  bin: 3.25e1
  variant carriers: 88
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 2.25e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 4.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 4.25e1
  variant carriers: 70
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 3.75e1
  variant carriers: 87
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1393
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1080
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 800
  bin: 9.75e1
  variant carriers: 432
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 8.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 459
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 5.25e1
  variant carriers: 2
num of homozygotes: 19
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: East Asian
population: Latino
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD

4-164506867-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164506867
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164506867
    reference: chr 4
allele count: 1
allele frequency: 9.00657479960371e-6
allele num: 111030
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.435C>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.850C>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.423+34C>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.423+34C>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1191+34C>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.372+34C>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.372+34C>A
  variant of: http://identifiers.org/hgnc/26077
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12953
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7312
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4308
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1962
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2159
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24904
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2935
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31088
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1069
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9017
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

4-164506880-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164506880
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164506880
    reference: chr 4
allele count: 1
allele frequency: 8.966358223943762e-6
allele num: 111528
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.372+21G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.422G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.372+21G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.423+21G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.423+21G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.837G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1191+21G>A
  variant of: http://identifiers.org/hgnc/26077
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3528
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24915
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4307
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12961
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7337
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1961
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1315
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2872
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3164
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1195
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

4-164506888-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164506888
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164506888
    reference: chr 4
allele count: 14
allele frequency: 1.251117068811439e-4
allele num: 111900
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.372+13T>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.423+13T>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1191+13T>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.414T>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.423+13T>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.829T>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.372+13T>C
  variant of: http://identifiers.org/hgnc/26077
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4306
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1958
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7376
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12965
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3796
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24920
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4837
  bin: 9.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 2872
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31174
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3508
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum

4-164506894-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164506894
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164506894
    reference: chr 4
allele count: 1
allele frequency: 8.911067545891997e-6
allele num: 112220
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.372+7T>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.423+7T>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1191+7T>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.372+7T>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.823T>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.423+7T>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.408T>C
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3892
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7438
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4307
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24931
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12965
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1958
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1067
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2871
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
hgvs: c.423+7T>C
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

4-164506897-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164506897
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164506897
    reference: chr 4
allele count: 1
allele frequency: 8.894106764857605e-6
allele num: 112434
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.372+4C>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.372+4C>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.423+4C>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.423+4C>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.820C>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1191+4C>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.405C>A
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12967
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3872
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1958
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7475
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24932
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4307
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3417
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 7.5e0
  variant carriers: 0
hgvs: c.423+4C>A
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: BaseQRankSum

4-164506898-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164506898
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164506898
    reference: chr 4
allele count: 2
allele frequency: 1.777682968019483e-5
allele num: 112506
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.404A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.372+3A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.423+3A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.372+3A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.819A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.423+3A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1191+3A>G
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12967
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7487
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3865
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4307
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24934
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9024
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2110
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4823
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3417
  bin: 7.75e1
  variant carriers: 0
hgvs: c.423+3A>G
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

4-164506905-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164506905
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164506905
    reference: chr 4
allele count: 1
allele frequency: 8.836732529779788e-6
allele num: 113164
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.368G>C
  hgvsp: ENSP00000345676.5:p.Arg123Pro
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.368G>C
  hgvsp: ENSP00000424089.1:p.Arg123Pro
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1187G>C
  hgvsp: ENSP00000421322.1:p.Arg396Pro
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.419G>C
  hgvsp: ENSP00000426731.1:p.Arg140Pro
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.812G>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.419G>C
  hgvsp: ENSP00000274056.7:p.Arg140Pro
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.419G>C
  hgvsp: ENSP00000427223.1:p.Arg140Pro
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.397G>C
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7669
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4307
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24949
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3669
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12968
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9029
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2871
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg140Pro
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum

4-164506905-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164506905
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164506905
    reference: chr 4
allele count: 1
allele frequency: 8.836732529779788e-6
allele num: 113164
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.419G>A
  hgvsp: ENSP00000427223.1:p.Arg140Gln
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.812G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.419G>A
  hgvsp: ENSP00000274056.7:p.Arg140Gln
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.419G>A
  hgvsp: ENSP00000426731.1:p.Arg140Gln
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1187G>A
  hgvsp: ENSP00000421322.1:p.Arg396Gln
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.397G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.368G>A
  hgvsp: ENSP00000345676.5:p.Arg123Gln
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.368G>A
  hgvsp: ENSP00000424089.1:p.Arg123Gln
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24949
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12968
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3669
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7669
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4307
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3581
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg140Gln
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: DP

4-164506906-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164506906
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164506906
    reference: chr 4
allele count: 1
allele frequency: 8.807158458394984e-6
allele num: 113544
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.418C>T
  hgvsp: ENSP00000426731.1:p.Arg140Trp
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1186C>T
  hgvsp: ENSP00000421322.1:p.Arg396Trp
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.396C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.367C>T
  hgvsp: ENSP00000424089.1:p.Arg123Trp
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.418C>T
  hgvsp: ENSP00000427223.1:p.Arg140Trp
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.418C>T
  hgvsp: ENSP00000274056.7:p.Arg140Trp
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.367C>T
  hgvsp: ENSP00000345676.5:p.Arg123Trp
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.811C>T
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 24951
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1958
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3599
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12968
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4308
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7794
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3418
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3572
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg140Trp
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

4-164506922-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164506922
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164506922
    reference: chr 4
allele count: 1
allele frequency: 8.642594161063386e-6
allele num: 115706
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.351C>G
  hgvsp: ENST00000339875.5:c.351C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1170C>G
  hgvsp: ENST00000514618.1:c.1170C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.402C>G
  hgvsp: ENST00000274056.7:c.402C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.402C>G
  hgvsp: ENST00000503008.1:c.402C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.351C>G
  hgvsp: ENST00000510786.1:c.351C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.402C>G
  hgvsp: ENST00000507270.1:c.402C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.795C>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.380C>G
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2720
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8859
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25064
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12972
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4307
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1956
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4820
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2774
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr134Thr
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum

4-164506925-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164506925
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164506925
    reference: chr 4
allele count: 3
allele frequency: 2.58384579608289e-5
allele num: 116106
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.399G>C
  hgvsp: ENSP00000274056.7:p.Glu133Asp
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.348G>C
  hgvsp: ENSP00000424089.1:p.Glu116Asp
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.792G>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.399G>C
  hgvsp: ENSP00000427223.1:p.Glu133Asp
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1167G>C
  hgvsp: ENSP00000421322.1:p.Glu389Asp
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.348G>C
  hgvsp: ENSP00000345676.5:p.Glu116Asp
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.399G>C
  hgvsp: ENSP00000426731.1:p.Glu133Asp
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.377G>C
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4306
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2523
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9075
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25091
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12979
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2880
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Glu133Asp
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD

4-164506940-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164506940
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164506940
    reference: chr 4
allele count: 1
allele frequency: 8.442665856170744e-6
allele num: 118446
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.384T>C
  hgvsp: ENST00000503008.1:c.384T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.362T>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.333T>C
  hgvsp: ENST00000339875.5:c.333T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.384T>C
  hgvsp: ENST00000507270.1:c.384T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.777T>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.384T>C
  hgvsp: ENST00000274056.7:c.384T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1152T>C
  hgvsp: ENST00000514618.1:c.1152T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.333T>C
  hgvsp: ENST00000510786.1:c.333T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4306
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10302
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1956
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25310
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12996
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2888
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1498
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Tyr128Tyr
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

4-164506962-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164506962
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164506962
    reference: chr 4
allele count: 2
allele frequency: 1.65582103886212e-5
allele num: 120786
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.311G>A
  hgvsp: ENSP00000345676.5:p.Arg104His
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.362G>A
  hgvsp: ENSP00000427223.1:p.Arg121His
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.311G>A
  hgvsp: ENSP00000424089.1:p.Arg104His
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.362G>A
  hgvsp: ENSP00000274056.7:p.Arg121His
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.340G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.362G>A
  hgvsp: ENSP00000426731.1:p.Arg121His
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1130G>A
  hgvsp: ENSP00000421322.1:p.Arg377His
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.755G>A
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11329
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13050
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4306
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25824
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35758
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4817
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3446
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg121His
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

4-164506963-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164506963
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164506963
    reference: chr 4
allele count: 1
allele frequency: 8.277323444690924e-6
allele num: 120812
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.754C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.310C>T
  hgvsp: ENSP00000345676.5:p.Arg104Cys
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.310C>T
  hgvsp: ENSP00000424089.1:p.Arg104Cys
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1129C>T
  hgvsp: ENSP00000421322.1:p.Arg377Cys
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.361C>T
  hgvsp: ENSP00000427223.1:p.Arg121Cys
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.339C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.361C>T
  hgvsp: ENSP00000426731.1:p.Arg121Cys
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.361C>T
  hgvsp: ENSP00000274056.7:p.Arg121Cys
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4305
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13054
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11352
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25823
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1956
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1067
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3446
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg121Cys
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum

4-164506997-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164506997
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164506997
    reference: chr 4
allele count: 1
allele frequency: 8.261458643138033e-6
allele num: 121044
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.327C>T
  hgvsp: ENST00000274056.7:c.327C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.720C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.327C>T
  hgvsp: ENST00000503008.1:c.327C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.327C>T
  hgvsp: ENST00000507270.1:c.327C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.276C>T
  hgvsp: ENST00000510786.1:c.276C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1095C>T
  hgvsp: ENST00000514618.1:c.1095C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.276C>T
  hgvsp: ENST00000339875.5:c.276C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.305C>T
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13051
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25942
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1951
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4306
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11356
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3443
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2898
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 809
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser109Ser
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD

4-164507000-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164507000
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164507000
    reference: chr 4
allele count: 8
allele frequency: 6.609276119033063e-5
allele num: 121042
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.717G>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.273G>C
  hgvsp: ENSP00000345676.5:p.Gln91His
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.273G>C
  hgvsp: ENSP00000424089.1:p.Gln91His
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.302G>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.324G>C
  hgvsp: ENSP00000274056.7:p.Gln108His
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.324G>C
  hgvsp: ENSP00000427223.1:p.Gln108His
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1092G>C
  hgvsp: ENSP00000421322.1:p.Gln364His
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.324G>C
  hgvsp: ENSP00000426731.1:p.Gln108His
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13052
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4302
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 25943
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11363
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gln108His
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum

4-164507003-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164507003
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164507003
    reference: chr 4
allele count: 6
allele frequency: 4.957448566471123e-5
allele num: 121030
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.321C>T
  hgvsp: ENST00000274056.7:c.321C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.299C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1089C>T
  hgvsp: ENST00000514618.1:c.1089C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.321C>T
  hgvsp: ENST00000507270.1:c.321C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.270C>T
  hgvsp: ENST00000510786.1:c.270C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.714C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.270C>T
  hgvsp: ENST00000339875.5:c.270C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.321C>T
  hgvsp: ENST00000503008.1:c.321C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11347
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4306
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1946
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25945
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13045
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1064
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35923
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2892
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3443
  bin: 7.75e1
  variant carriers: 0
hgvs: p.His107His
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: DP

4-164507006-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164507006
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164507006
    reference: chr 4
allele count: 5
allele frequency: 4.132368012165691e-5
allele num: 120996
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.296C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.711C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.318C>T
  hgvsp: ENST00000507270.1:c.318C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.318C>T
  hgvsp: ENST00000274056.7:c.318C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.267C>T
  hgvsp: ENST00000510786.1:c.267C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1086C>T
  hgvsp: ENST00000514618.1:c.1086C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.318C>T
  hgvsp: ENST00000503008.1:c.318C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.267C>T
  hgvsp: ENST00000339875.5:c.267C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25954
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11316
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4298
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1945
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13043
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 805
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1063
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2101
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Val106Val
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

4-164507013-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164507013
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164507013
    reference: chr 4
allele count: 2
allele frequency: 1.654451301225948e-5
allele num: 120886
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.260G>A
  hgvsp: ENSP00000424089.1:p.Arg87His
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.311G>A
  hgvsp: ENSP00000426731.1:p.Arg104His
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.260G>A
  hgvsp: ENSP00000345676.5:p.Arg87His
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.311G>A
  hgvsp: ENSP00000427223.1:p.Arg104His
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.704G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1079G>A
  hgvsp: ENSP00000421322.1:p.Arg360His
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.311G>A
  hgvsp: ENSP00000274056.7:p.Arg104His
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.289G>A
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4294
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25942
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13037
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1945
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11233
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 805
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg104His
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum

4-164507014-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164507014
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164507014
    reference: chr 4
allele count: 1
allele frequency: 8.271161767381846e-6
allele num: 120902
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.310C>T
  hgvsp: ENSP00000427223.1:p.Arg104Cys
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.259C>T
  hgvsp: ENSP00000345676.5:p.Arg87Cys
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.310C>T
  hgvsp: ENSP00000274056.7:p.Arg104Cys
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.288C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.259C>T
  hgvsp: ENSP00000424089.1:p.Arg87Cys
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1078C>T
  hgvsp: ENSP00000421322.1:p.Arg360Cys
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.703C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.310C>T
  hgvsp: ENSP00000426731.1:p.Arg104Cys
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13040
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11229
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4290
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25950
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 804
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2891
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg104Cys
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

4-164507017-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164507017
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164507017
    reference: chr 4
allele count: 1
allele frequency: 8.274309922552459e-6
allele num: 120856
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.256C>A
  hgvsp: ENSP00000424089.1:p.Leu86Met
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1075C>A
  hgvsp: ENSP00000421322.1:p.Leu359Met
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.285C>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.307C>A
  hgvsp: ENSP00000426731.1:p.Leu103Met
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.307C>A
  hgvsp: ENSP00000274056.7:p.Leu103Met
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.700C>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.307C>A
  hgvsp: ENSP00000427223.1:p.Leu103Met
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.256C>A
  hgvsp: ENSP00000345676.5:p.Leu86Met
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4288
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13034
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1939
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25941
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11163
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9213
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 802
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2893
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu103Met
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/4-164507024-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164507024
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164507024
    reference: chr 4
allele count: 1
allele frequency: 8.285690612312537e-6
allele num: 120690
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1068T>G
  hgvsp: ENST00000514618.1:c.1068T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.249T>G
  hgvsp: ENST00000510786.1:c.249T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.278T>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.300T>G
  hgvsp: ENST00000274056.7:c.300T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.693T>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.249T>G
  hgvsp: ENST00000339875.5:c.249T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.300T>G
  hgvsp: ENST00000503008.1:c.300T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.300T>G
  hgvsp: ENST00000507270.1:c.300T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4270
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1932
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13020
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25885
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10982
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2089
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 796
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Thr100Thr
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: Other
reference allele: A
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD

4-164507031-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164507031
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164507031
    reference: chr 4
allele count: 82
allele frequency: 6.813573968823745e-4
allele num: 120348
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.242G>A
  hgvsp: ENSP00000345676.5:p.Arg81His
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.293G>A
  hgvsp: ENSP00000427223.1:p.Arg98His
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.242G>A
  hgvsp: ENSP00000424089.1:p.Arg81His
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.293G>A
  hgvsp: ENSP00000426731.1:p.Arg98His
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.293G>A
  hgvsp: ENSP00000274056.7:p.Arg98His
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.686G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1061G>A
  hgvsp: ENSP00000421322.1:p.Arg354His
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.271G>A
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 4257
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 10665
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13002
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 1931
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 25725
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34986
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1054
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg98His
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD

4-164507032-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164507032
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164507032
    reference: chr 4
allele count: 2
allele frequency: 1.663699735471742e-5
allele num: 120214
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.241C>T
  hgvsp: ENSP00000424089.1:p.Arg81Cys
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.292C>T
  hgvsp: ENSP00000426731.1:p.Arg98Cys
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.292C>T
  hgvsp: ENSP00000274056.7:p.Arg98Cys
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.685C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.241C>T
  hgvsp: ENSP00000345676.5:p.Arg81Cys
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.292C>T
  hgvsp: ENSP00000427223.1:p.Arg98Cys
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1060C>T
  hgvsp: ENSP00000421322.1:p.Arg354Cys
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.270C>T
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4250
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10570
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1921
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12982
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25710
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9115
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg98Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD

4-164507044-T-TGCGGC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164507044
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164507049
    reference: chr 4
allele count: 1
allele frequency: 8.372404554588077e-6
allele num: 119440
alternate allele: TGCGGC
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1047_1048insGCCGC
  hgvsp: ENSP00000421322.1:p.Ile350AlafsTer24
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.279_280insGCCGC
  hgvsp: ENSP00000274056.7:p.Ile94AlafsTer24
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.257_258insGCCGC
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.228_229insGCCGC
  hgvsp: ENSP00000424089.1:p.Ile77AlafsTer24
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.279_280insGCCGC
  hgvsp: ENSP00000427223.1:p.Ile94AlafsTer24
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.279_280insGCCGC
  hgvsp: ENSP00000426731.1:p.Ile94AlafsTer24
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.672_673insGCCGC
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.228_229insGCCGC
  hgvsp: ENSP00000345676.5:p.Ile77AlafsTer24
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 12810
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1379
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9920
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25337
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1899
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4228
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8983
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1046
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ile94AlafsTer24
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD

4-164507046-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164507046
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164507046
    reference: chr 4
allele count: 1
allele frequency: 8.385462961410099e-6
allele num: 119254
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.227T>C
  hgvsp: ENSP00000345676.5:p.Leu76Pro
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.671T>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.278T>C
  hgvsp: ENSP00000274056.7:p.Leu93Pro
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.227T>C
  hgvsp: ENSP00000424089.1:p.Leu76Pro
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1046T>C
  hgvsp: ENSP00000421322.1:p.Leu349Pro
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.278T>C
  hgvsp: ENSP00000426731.1:p.Leu93Pro
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.278T>C
  hgvsp: ENSP00000427223.1:p.Leu93Pro
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.256T>C
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9764
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4221
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25244
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12763
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2801
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4684
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8946
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu93Pro
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
reference allele: A
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff

4-164507052-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164507052
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164507052
    reference: chr 4
allele count: 1420
allele frequency: 1.197463401470687e-2
allele num: 118584
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.221G>A
  hgvsp: ENSP00000424089.1:p.Ser74Asn
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.272G>A
  hgvsp: ENSP00000426731.1:p.Ser91Asn
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.272G>A
  hgvsp: ENSP00000274056.7:p.Ser91Asn
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.221G>A
  hgvsp: ENSP00000345676.5:p.Ser74Asn
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1040G>A
  hgvsp: ENSP00000421322.1:p.Ser347Asn
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.272G>A
  hgvsp: ENSP00000427223.1:p.Ser91Asn
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.665G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.250G>A
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 4.75e1
  variant carriers: 158
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 6.25e1
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 5.25e1
  variant carriers: 117
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 2252
  bin: 1.25e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 4204
  bin: 3.75e1
  variant carriers: 173
genotype depth: GenotypeDepth
  all individuals: 12613
  bin: 3.25e1
  variant carriers: 133
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9046
  bin: 2.25e1
  variant carriers: 125
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 1.75e1
  variant carriers: 68
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.75e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 9.75e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 24909
  bin: 2.75e1
  variant carriers: 132
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 5.75e1
  variant carriers: 97
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 7.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1847
  bin: 4.25e1
  variant carriers: 153
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 8.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 549
  bin: 2.75e1
  variant carriers: 1
hgvs: p.Ser91Asn
num of homozygotes: 21
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
population: African
population: European (Finnish)
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum

4-164507057-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164507057
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164507057
    reference: chr 4
allele count: 4
allele frequency: 3.39668144223094e-5
allele num: 117762
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.267A>G
  hgvsp: ENST00000503008.1:c.267A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.267A>G
  hgvsp: ENST00000507270.1:c.267A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.660A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.245A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1035A>G
  hgvsp: ENST00000514618.1:c.1035A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.267A>G
  hgvsp: ENST00000274056.7:c.267A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.216A>G
  hgvsp: ENST00000510786.1:c.216A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.216A>G
  hgvsp: ENST00000339875.5:c.216A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24724
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4042
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3269
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12350
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1706
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8553
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3203
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3536
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1947
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8497
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 505
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Glu89Glu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: European (Finnish)
population: East Asian
reference allele: T
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: VQSLOD

4-164507057-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164507057
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164507057
    reference: chr 4
allele count: 1
allele frequency: 8.491703605577351e-6
allele num: 117762
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.267A>C
  hgvsp: ENSP00000427223.1:p.Glu89Asp
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.660A>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.267A>C
  hgvsp: ENSP00000426731.1:p.Glu89Asp
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.216A>C
  hgvsp: ENSP00000424089.1:p.Glu72Asp
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.216A>C
  hgvsp: ENSP00000345676.5:p.Glu72Asp
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.267A>C
  hgvsp: ENSP00000274056.7:p.Glu89Asp
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1035A>C
  hgvsp: ENSP00000421322.1:p.Glu345Asp
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.245A>C
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1706
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3269
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24724
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8553
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12350
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4042
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1947
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 907
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3203
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4034
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 966
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Glu89Asp
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

4-164507068-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164507068
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164507068
    reference: chr 4
allele count: 1
allele frequency: 8.572065353426254e-6
allele num: 116658
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.256G>A
  hgvsp: ENSP00000426731.1:p.Glu86Lys
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.205G>A
  hgvsp: ENSP00000424089.1:p.Glu69Lys
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1024G>A
  hgvsp: ENSP00000421322.1:p.Glu342Lys
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.256G>A
  hgvsp: ENSP00000427223.1:p.Glu86Lys
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.649G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.205G>A
  hgvsp: ENSP00000345676.5:p.Glu69Lys
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.256G>A
  hgvsp: ENSP00000274056.7:p.Glu86Lys
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.234G>A
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8442
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3872
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4577
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23483
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2049
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1745
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11540
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1881
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4611
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29774
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Glu86Lys
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum

4-164507069-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164507069
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164507069
    reference: chr 4
allele count: 1
allele frequency: 8.580450302031851e-6
allele num: 116544
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.255C>T
  hgvsp: ENST00000503008.1:c.255C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1023C>T
  hgvsp: ENST00000514618.1:c.1023C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.204C>T
  hgvsp: ENST00000510786.1:c.204C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.204C>T
  hgvsp: ENST00000339875.5:c.204C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.255C>T
  hgvsp: ENST00000507270.1:c.255C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.233C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.255C>T
  hgvsp: ENST00000274056.7:c.255C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.648C>T
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23371
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3841
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11363
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4731
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1801
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8504
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29614
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 692
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4744
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 940
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Cys85Cys
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: FS

4-164507089-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164507089
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164507089
    reference: chr 4
allele count: 1
allele frequency: 8.804987144718768e-6
allele num: 113572
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1011-8T>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.221-8T>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.243-8T>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.243-8T>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.636-8T>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.192-8T>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.192-8T>C
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.243-8T>C
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1488
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8625
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7296
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17620
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3233
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7332
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3300
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8262
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1241
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5908
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3031
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 649
  bin: 8.75e1
  variant carriers: 0
hgvs: c.243-8T>C
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

4-164507091-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164507091
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164507091
    reference: chr 4
allele count: 1
allele frequency: 8.840326031224032e-6
allele num: 113118
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1011-10C>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.192-10C>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.243-10C>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.221-10C>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.243-10C>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.636-10C>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.192-10C>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.243-10C>G
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8427
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7418
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7573
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3368
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8496
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3181
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17202
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21135
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7092
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1394
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3594
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 801
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2473
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5760
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD

http://identifiers.org/exac.variant/4-164507094-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164507094
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164507094
    reference: chr 4
allele count: 2
allele frequency: 1.783898531851508e-5
allele num: 112114
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.192-13T>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.243-13T>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1011-13T>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.243-13T>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.636-13T>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.192-13T>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.243-13T>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.221-13T>G
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9566
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3648
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7752
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15674
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8005
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7977
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3065
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1829
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5280
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 567
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 640
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3950
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1822
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

4-164507097-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164507097
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164507097
    reference: chr 4
allele count: 4
allele frequency: 3.656307129798903e-5
allele num: 109400
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.243-16C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.243-16C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.192-16C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.243-16C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1011-16C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.636-16C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.221-16C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.192-16C>T
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 7520
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8088
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14388
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3844
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8157
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10697
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1418
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2997
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 869
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3757
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1073
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2581
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7210
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4873
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2025
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 762
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ

4-164507097-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164507097
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164507097
    reference: chr 4
allele count: 23
allele frequency: 2.102376599634369e-4
allele num: 109400
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.221-16C>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.243-16C>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.243-16C>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.192-16C>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.636-16C>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1011-16C>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.192-16C>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.243-16C>G
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10697
  bin: 2.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14388
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2997
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8088
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7520
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1418
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8157
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3844
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 869
  bin: 7.5e0
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 2025
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1987
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7210
  bin: 2.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1073
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3905
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4873
  bin: 6.75e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff

4-164507098-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164507098
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164507098
    reference: chr 4
allele count: 0
allele frequency: 0.0e0
allele num: 112530
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.221-17G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.636-17G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.192-17G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1011-17G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.192-17G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.243-17G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.243-17G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.243-17G>A
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 3306
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7511
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10794
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8171
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3612
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13876
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7721
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4722
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 567
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7063
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1069
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1772
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2643
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1836
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum

4-164507104-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164507104
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164507104
    reference: chr 4
allele count: 1
allele frequency: 9.081332413091649e-6
allele num: 110116
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1011-23C>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.192-23C>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.243-23C>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.192-23C>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.221-23C>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.636-23C>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.243-23C>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.243-23C>G
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8460
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6325
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2960
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12447
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9017
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11550
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 841
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1089
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1496
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1179
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7437
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1250
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5170
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ

4-164507104-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164507104
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164507104
    reference: chr 4
allele count: 50001
allele frequency: 4.540757019869955e-1
allele num: 110116
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.243-23C>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.192-23C>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1011-23C>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.221-23C>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.192-23C>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.243-23C>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.243-23C>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.636-23C>A
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.75e1
  variant carriers: 135
genotype depth: GenotypeDepth
  all individuals: 6325
  bin: 3.25e1
  variant carriers: 4796
genotype depth: GenotypeDepth
  all individuals: 11550
  bin: 2.25e1
  variant carriers: 8870
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 7.5e0
  variant carriers: 1435
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.75e1
  variant carriers: 187
genotype depth: GenotypeDepth
  all individuals: 2960
  bin: 3.75e1
  variant carriers: 2562
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 5.75e1
  variant carriers: 373
genotype depth: GenotypeDepth
  all individuals: 8460
  bin: 1.75e1
  variant carriers: 6978
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 5.25e1
  variant carriers: 480
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 4.75e1
  variant carriers: 758
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 105
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.25e1
  variant carriers: 104
genotype depth: GenotypeDepth
  all individuals: 12447
  bin: 2.75e1
  variant carriers: 7611
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 2.5e0
  variant carriers: 87
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 160
genotype depth: GenotypeDepth
  all individuals: 9017
  bin: 1.25e1
  variant carriers: 4082
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 9.75e1
  variant carriers: 548
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 6.25e1
  variant carriers: 267
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 4.25e1
  variant carriers: 1307
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.75e1
  variant carriers: 100
genotype quality: GenotypeQuality
  all individuals: 5170
  bin: 2.25e1
  variant carriers: 416
genotype quality: GenotypeQuality
  all individuals: 1179
  bin: 5.25e1
  variant carriers: 972
genotype quality: GenotypeQuality
  all individuals: 844
  bin: 7.25e1
  variant carriers: 580
genotype quality: GenotypeQuality
  all individuals: 771
  bin: 5.75e1
  variant carriers: 567
genotype quality: GenotypeQuality
  all individuals: 1496
  bin: 2.75e1
  variant carriers: 323
genotype quality: GenotypeQuality
  all individuals: 841
  bin: 2.5e0
  variant carriers: 92
genotype quality: GenotypeQuality
  all individuals: 571
  bin: 7.5e0
  variant carriers: 142
genotype quality: GenotypeQuality
  all individuals: 30762
  bin: 9.75e1
  variant carriers: 29940
num of homozygotes: 11002
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

4-164507131-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164507131
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164507131
    reference: chr 4
allele count: 1
allele frequency: 1.105143337090821e-5
allele num: 90486
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1011-50G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.243-50G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.243-50G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.192-50G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.243-50G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.221-50G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.636-50G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.192-50G>A
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2739
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11908
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18924
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6052
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14052
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6758
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2863
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12147
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8613
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5414
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

4-164507132-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164507132
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164507132
    reference: chr 4
allele count: 2
allele frequency: 2.23463687150838e-5
allele num: 89500
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.192-51C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1011-51C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.243-51C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.243-51C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.243-51C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.192-51C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.636-51C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.221-51C>T
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18835
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6175
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2630
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2164
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13974
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11603
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2730
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2482
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3692
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2853
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2438
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5283
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

4-164507132-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164507132
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164507132
    reference: chr 4
allele count: 13
allele frequency: 1.452513966480447e-4
allele num: 89500
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.192-51C>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.243-51C>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1011-51C>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.636-51C>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.221-51C>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.243-51C>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.243-51C>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.192-51C>A
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2630
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2164
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13974
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18835
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6175
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3692
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 720
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2730
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5283
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6730
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

4-164533390-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164533390
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164533390
    reference: chr 4
allele count: 2
allele frequency: 1.124859392575928e-3
allele num: 1778
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.242+1076C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.242+1076C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.635+33C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.220+1076C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.242+1076C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1010+33C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.191+1076C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.191+1076C>T
  variant of: http://identifiers.org/hgnc/26077
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2221
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5028
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1517
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3976
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 726
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

4-164533416-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164533416
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164533416
    reference: chr 4
allele count: 1
allele frequency: 4.27715996578272e-4
allele num: 2338
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.191+1050C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.191+1050C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.242+1050C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.242+1050C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.635+7C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.220+1050C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1010+7C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.242+1050C>T
  variant of: http://identifiers.org/hgnc/26077
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3259
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3659
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 551
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 2.5e0
  variant carriers: 0
hgvs: c.1010+7C>T
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQ

4-164533422-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164533422
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164533422
    reference: chr 4
allele count: 4
allele frequency: 1.539645881447267e-3
allele num: 2598
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.1010+1G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.242+1044G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.242+1044G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.191+1044G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.220+1044G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.191+1044G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.242+1044G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.635+1G>A
  variant of: http://identifiers.org/hgnc/26077
canonical: false
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2861
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3853
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3492
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 581
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 7.25e1
  variant carriers: 0
hgvs: c.1010+1G>A
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

4-164533448-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164533448
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164533448
    reference: chr 4
allele count: 0
allele frequency: 0.0e0
allele num: 5006
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.610G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.985G>A
  hgvsp: ENSP00000421322.1:p.Gly329Arg
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.242+1018G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.242+1018G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.242+1018G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.191+1018G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.220+1018G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.191+1018G>A
  variant of: http://identifiers.org/hgnc/26077
canonical: false
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3426
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2020
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3393
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1119
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gly329Arg
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: QD

4-164533491-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164533491
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164533491
    reference: chr 4
allele count: 15
allele frequency: 1.331439730161548e-3
allele num: 11266
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.942G>A
  hgvsp: ENST00000514618.1:c.942G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.242+975G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.242+975G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.191+975G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.567G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.191+975G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.242+975G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.220+975G>A
  variant of: http://identifiers.org/hgnc/26077
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1925
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4103
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gln314Gln
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum

4-164533543-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164533543
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164533543
    reference: chr 4
allele count: 1
allele frequency: 8.177952240758914e-5
allele num: 12228
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.191+923A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.515A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.220+923A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.242+923A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.242+923A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.242+923A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.890A>G
  hgvsp: ENSP00000421322.1:p.Glu297Gly
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.191+923A>G
  variant of: http://identifiers.org/hgnc/26077
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4344
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 546
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Glu297Gly
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

4-164533550-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164533550
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164533550
    reference: chr 4
allele count: 1
allele frequency: 8.175277959450622e-5
allele num: 12232
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.883A>G
  hgvsp: ENSP00000421322.1:p.Ser295Gly
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.220+916A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.508A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.242+916A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.191+916A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.191+916A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.242+916A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.242+916A>G
  variant of: http://identifiers.org/hgnc/26077
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4332
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1775
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 543
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ser295Gly
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

4-164533616-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164533616
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164533616
    reference: chr 4
allele count: 9
allele frequency: 7.409846863164828e-4
allele num: 12146
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.817C>T
  hgvsp: ENSP00000421322.1:p.Pro273Ser
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.242+850C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.191+850C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.442C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.191+850C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.242+850C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.242+850C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.220+850C>T
  variant of: http://identifiers.org/hgnc/26077
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1667
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3569
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 440
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Pro273Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum

4-164533619-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164533619
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164533619
    reference: chr 4
allele count: 3
allele frequency: 2.476473501733531e-4
allele num: 12114
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.242+847G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.242+847G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.191+847G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.242+847G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.439G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.220+847G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.814G>A
  hgvsp: ENSP00000421322.1:p.Asp272Asn
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.191+847G>A
  variant of: http://identifiers.org/hgnc/26077
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3535
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4048
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1532
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asp272Asn
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP

4-164533639-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164533639
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164533639
    reference: chr 4
allele count: 1
allele frequency: 8.227743952608195e-5
allele num: 12154
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.191+827A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.242+827A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.191+827A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.419A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.242+827A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.242+827A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.794A>G
  hgvsp: ENSP00000421322.1:p.Lys265Arg
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.220+827A>G
  variant of: http://identifiers.org/hgnc/26077
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3408
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1498
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Lys265Arg
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: Latino
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

4-164533642-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164533642
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164533642
    reference: chr 4
allele count: 1
allele frequency: 8.249463784853984e-5
allele num: 12122
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.416G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.191+824G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.220+824G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.791G>A
  hgvsp: ENSP00000421322.1:p.Ser264Asn
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.191+824G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.242+824G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.242+824G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.242+824G>A
  variant of: http://identifiers.org/hgnc/26077
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3376
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1703
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1573
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser264Asn
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

4-164533696-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164533696
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164533696
    reference: chr 4
allele count: 278
allele frequency: 2.271984308597581e-2
allele num: 12236
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.362C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.242+770C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.191+770C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.242+770C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.220+770C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.191+770C>T
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.737C>T
  hgvsp: ENSP00000421322.1:p.Ser246Phe
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.242+770C>T
  variant of: http://identifiers.org/hgnc/26077
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 3.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 3.75e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1939
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3468
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 5.25e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 4.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1368
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 9.75e1
  variant carriers: 271
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.25e1
  variant carriers: 1
hgvs: p.Ser246Phe
num of homozygotes: 7
population: Latino
population: South Asian
population: East Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum

4-164533700-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164533700
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164533700
    reference: chr 4
allele count: 1
allele frequency: 8.169934640522875e-5
allele num: 12240
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.733C>A
  hgvsp: ENSP00000421322.1:p.Pro245Thr
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.242+766C>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.191+766C>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.358C>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.242+766C>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.191+766C>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.242+766C>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.220+766C>A
  variant of: http://identifiers.org/hgnc/26077
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3511
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1413
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Pro245Thr
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

4-164533702-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164533702
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164533702
    reference: chr 4
allele count: 1441
allele frequency: 1.177095245874857e-1
allele num: 12242
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.242+764A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.191+764A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.356A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.242+764A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.242+764A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.191+764A>G
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.731A>G
  hgvsp: ENSP00000421322.1:p.Asn244Ser
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.220+764A>G
  variant of: http://identifiers.org/hgnc/26077
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2824
  bin: 2.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.25e1
  variant carriers: 191
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.5e0
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1432
  bin: 2.5e0
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 4.25e1
  variant carriers: 159
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1744
  bin: 2.75e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 3.25e1
  variant carriers: 83
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 6.25e1
  variant carriers: 147
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 4.75e1
  variant carriers: 181
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 5.75e1
  variant carriers: 166
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 3.75e1
  variant carriers: 110
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.75e1
  variant carriers: 106
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1217
  bin: 7.5e0
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 2
hgvs: p.Asn244Ser
num of homozygotes: 98
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: African
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

4-164533717-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164533717
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164533717
    reference: chr 4
allele count: 1
allele frequency: 8.152616990053807e-5
allele num: 12266
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000424089
  ensembl transcript: ENST00000510786
  gene symbol: MARCH1
  hgvsc: ENST00000510786.1:c.191+749G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000512214
  gene symbol: MARCH1
  hgvsc: ENST00000512214.1:n.341G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000427223
  ensembl transcript: ENST00000503008
  gene symbol: MARCH1
  hgvsc: ENST00000503008.1:c.242+749G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000274056
  ensembl transcript: ENST00000274056
  gene symbol: MARCH1
  hgvsc: ENST00000274056.7:c.242+749G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000426731
  ensembl transcript: ENST00000507270
  gene symbol: MARCH1
  hgvsc: ENST00000507270.1:c.242+749G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.716G>A
  hgvsp: ENSP00000421322.1:p.Arg239Lys
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000345676
  ensembl transcript: ENST00000339875
  gene symbol: MARCH1
  hgvsc: ENST00000339875.5:c.191+749G>A
  variant of: http://identifiers.org/hgnc/26077
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145416
  ensembl transcript: ENST00000505517
  gene symbol: MARCH1
  hgvsc: ENST00000505517.1:n.220+749G>A
  variant of: http://identifiers.org/hgnc/26077
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2434
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1591
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3100
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1445
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 697
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5025
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Arg239Lys
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum

4-164533731-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 164533731
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 164533731
    reference: chr 4
allele count: 37
allele frequency: 3.014011078527208e-3
allele num: 12276
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145416
  ensembl protein: ENSP00000421322
  ensembl transcript: ENST00000514618
  gene symbol: MARCH1
  hgvsc: ENST00000514618.1:c.702A>G
  hgvsp: ENST00000514618.1:c.702A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26077
canonical: false
consequence: synonymous
filter: PASS
hgvs: p.Arg234Arg
num of homozygotes: 1
reference allele: T

GenotypeQuality
all individuals: 1425
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3368
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2914
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66464
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16034
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.535833081342606e-4
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.116071428571429e-3
allele num: 896
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.35e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.28e-1

DP
type: SiteQuality
SIO_000300: 3.044801e6

MQRankSum
type: SiteQuality
SIO_000300: 3.74e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.4e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

FS
type: SiteQuality
SIO_000300: 4.284e0

QD
type: SiteQuality
SIO_000300: 1.368e1

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3368
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37358
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 479
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.248439450686642e-4
allele num: 16020
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66454
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.574e1

MQRankSum
type: SiteQuality
SIO_000300: -2.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.23e0

VQSLOD
type: SiteQuality
SIO_000300: 6.29e-1

DP
type: SiteQuality
SIO_000300: 3.043267e6

FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 3.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 8.22e-1

GenotypeQuality
all individuals: 39
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.271165182490907e-5
allele num: 15946
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66410
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 9.66e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.332e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.916e0

MQRankSum
type: SiteQuality
SIO_000300: 1.84e-1

DP
type: SiteQuality
SIO_000300: 3.037527e6

QD
type: SiteQuality
SIO_000300: 1.062e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

GenotypeQuality
all individuals: 58
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.010959894014212e-5
allele num: 66424
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 15952
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.036071e6

FS
type: SiteQuality
SIO_000300: 2.94e0

MQRankSum
type: SiteQuality
SIO_000300: 4.11e-1

MQ
type: SiteQuality
SIO_000300: 5.96e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.202e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.99e-1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 8.9e-2

GenotypeQuality
all individuals: 37354
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1671
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GenotypeQuality
all individuals: 159
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15914
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.506114826194349e-5
allele num: 66396
num of homozygotes: 0

DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.7e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.24e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e0

VQSLOD
type: SiteQuality
SIO_000300: 6.21e-1

FS
type: SiteQuality
SIO_000300: 9.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.028e0

QD
type: SiteQuality
SIO_000300: 1.492e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15868
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.012864933265042e-5
allele num: 66382
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.06e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.51e0

MQ
type: SiteQuality
SIO_000300: 5.933e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.64e-1

DP
type: SiteQuality
SIO_000300: 3.028115e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -5.888e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.12e-1

QD
type: SiteQuality
SIO_000300: 1.449e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 1.270325203252033e-4
allele num: 15744
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66330
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.019368e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.52e0

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 4.52e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 8.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.67e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 5.789717461787865e-4
allele num: 8636
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66270
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.78e-1

DP
type: SiteQuality
SIO_000300: 3.014243e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.7e-3

ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 8.86e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.71e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.6e-2

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4
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European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 134
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2718
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 190
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
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South Asian
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allele frequency: 1.332622601279318e-4
allele num: 7504
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ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 1
allele frequency: 1.332622601279318e-4
allele num: 7504
num of homozygotes: 0

East Asian
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2720
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Latino
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allele frequency: 0.0e0
allele num: 92
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 190
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European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.76986e5

InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.935e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

South Asian
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allele frequency: 1.332267519317879e-4
allele num: 7506
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European (Non-Finnish)
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allele num: 2722
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African
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allele frequency: 5.319148936170213e-3
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Latino
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Other
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East Asian
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQRankSum
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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MQ
type: SiteQuality
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DP
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 1
allele frequency: 5.319148936170213e-3
allele num: 188
num of homozygotes: 0

European (Non-Finnish)
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allele count: 67
allele frequency: 2.485163204747775e-2
allele num: 2696
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Other
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allele num: 118
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South Asian
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allele num: 7504
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Latino
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 132
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European (Finnish)
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allele frequency: NaN
allele num: 0
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.19e-2

QD
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
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MQ
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FS
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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Other
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European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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allele num: 7496
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Latino
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
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QD
type: SiteQuality
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FS
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ClippingRankSum
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MQRankSum
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VQSLOD
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BaseQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: NaN
allele num: 0
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European (Non-Finnish)
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allele frequency: 1.118568232662192e-2
allele num: 2682
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Other
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South Asian
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allele frequency: 5.508135502800747e-2
allele num: 7498
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African
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allele frequency: 5.319148936170213e-3
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East Asian
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allele frequency: 6.818181818181818e-2
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Latino
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allele frequency: 2.173913043478261e-2
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MQ
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BaseQRankSum
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QD
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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FS
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DP
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ClippingRankSum
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SIO_000300: 1.7e-2

VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 800
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European (Non-Finnish)
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allele frequency: 1.56045190687223e-5
allele num: 64084
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East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Latino
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South Asian
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InbreedingCoeff
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DP
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FS
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ReadPosRankSum
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MQRankSum
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QD
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VQSLOD
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BaseQRankSum
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MQ
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 0.0e0
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Latino
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East Asian
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South Asian
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 1.511944360447536e-4
allele num: 6614
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Other
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VQSLOD
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MQ
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InbreedingCoeff
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FS
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BaseQRankSum
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DP
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MQRankSum
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ClippingRankSum
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QD
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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allele frequency: 0.0e0
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African
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allele num: 10254
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 64286
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Other
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allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.89e-1

InbreedingCoeff
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VQSLOD
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MQ
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DP
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ReadPosRankSum
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ClippingRankSum
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QD
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MQRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11454
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
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African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 822
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.553277415346381e-5
allele num: 64380
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South Asian
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BaseQRankSum
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SIO_000300: 3.65e0

MQRankSum
type: SiteQuality
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FS
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DP
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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MQ
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InbreedingCoeff
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele frequency: 9.746588693957115e-5
allele num: 10260
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Latino
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
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VQSLOD
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QD
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ReadPosRankSum
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ClippingRankSum
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FS
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MQRankSum
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InbreedingCoeff
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DP
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MQ
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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South Asian
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African
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Latino
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European (Non-Finnish)
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European (Finnish)
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ReadPosRankSum
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MQ
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DP
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VQSLOD
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QD
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BaseQRankSum
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FS
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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European (Non-Finnish)
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European (Finnish)
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Other
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East Asian
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Latino
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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QD
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MQ
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FS
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DP
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InbreedingCoeff
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Other
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African
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European (Non-Finnish)
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East Asian
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South Asian
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VQSLOD
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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FS
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MQ
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ReadPosRankSum
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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South Asian
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allele frequency: 0.0e0
allele num: 11050
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.783449e6

MQRankSum
type: SiteQuality
SIO_000300: 2.74e0

VQSLOD
type: SiteQuality
SIO_000300: -2.979e0

FS
type: SiteQuality
SIO_000300: 4.52e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

MQ
type: SiteQuality
SIO_000300: 5.957e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.93e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.0e0

QD
type: SiteQuality
SIO_000300: 6.98e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 12580
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.533272002453235e-5
allele num: 65220
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.51e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.138e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.800975e6

QD
type: SiteQuality
SIO_000300: 4.82e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.48e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.918e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.877e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.473830477072719e-4
allele num: 8636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10326
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65322
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12856
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.15e-1

QD
type: SiteQuality
SIO_000300: 1.315e1

MQRankSum
type: SiteQuality
SIO_000300: 2.46e-1

DP
type: SiteQuality
SIO_000300: 1.804826e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.226e0

MQ
type: SiteQuality
SIO_000300: 5.976e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 4.88e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65928
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.695652173913044e-5
allele num: 11500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.05e-1

FS
type: SiteQuality
SIO_000300: 5.653e0

MQ
type: SiteQuality
SIO_000300: 5.938e1

VQSLOD
type: SiteQuality
SIO_000300: 4.44e-1

QD
type: SiteQuality
SIO_000300: 1.092e1

DP
type: SiteQuality
SIO_000300: 1.82505e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.14e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 6.64e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503488092374308e-5
allele num: 66512
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.178178672927221e-5
allele num: 16186
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.849038e6

BaseQRankSum
type: SiteQuality
SIO_000300: 9.64e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 9.31e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.88e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.17e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.34e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503352476021528e-5
allele num: 66518
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16212
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.84921e6

QD
type: SiteQuality
SIO_000300: 1.564e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.28e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -2.46e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.11e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.8e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.703220191470844e-5
allele num: 11490
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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MQ
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 5.59e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 8

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.051619494020792e-4
allele num: 66564
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.706251088281386e-5
allele num: 11486
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
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African
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East Asian
type: Population
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allele frequency: 6.941230911614993e-4
allele num: 8644
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
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MQRankSum
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QD
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FS
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 35905
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.512470701364265e-5
allele num: 66556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16408
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.849965e6

FS
type: SiteQuality
SIO_000300: 5.87e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.523e0

VQSLOD
type: SiteQuality
SIO_000300: 8.25e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e0

QD
type: SiteQuality
SIO_000300: 1.466e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.551e0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.724480893386844e-5
allele num: 11462
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66528
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.114711997064938e-5
allele num: 16354
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.23e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.15e0

QD
type: SiteQuality
SIO_000300: 1.208e1

FS
type: SiteQuality
SIO_000300: 6.58e-1

MQ
type: SiteQuality
SIO_000300: 5.977e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.91e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.848446e6

MQRankSum
type: SiteQuality
SIO_000300: 1.87e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.49e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16362
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502990951994469e-5
allele num: 66534
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.4e0

FS
type: SiteQuality
SIO_000300: 8.83e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.21e-1

MQ
type: SiteQuality
SIO_000300: 5.913e1

QD
type: SiteQuality
SIO_000300: 1.62e1

VQSLOD
type: SiteQuality
SIO_000300: 2.32e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.67e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.848268e6

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66522
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.120700208103807e-5
allele num: 16338
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.983e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.23e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

DP
type: SiteQuality
SIO_000300: 1.847165e6

FS
type: SiteQuality
SIO_000300: 7.223e0

VQSLOD
type: SiteQuality
SIO_000300: -1.636e0

MQRankSum
type: SiteQuality
SIO_000300: -9.79e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.029e0

QD
type: SiteQuality
SIO_000300: 7.35e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16240
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66472
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.730574471800244e-5
allele num: 11454
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.99e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.81e0

DP
type: SiteQuality
SIO_000300: 1.843247e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.46e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.167e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 9.370000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.909e1

VQSLOD
type: SiteQuality
SIO_000300: -1.279e0

GenotypeQuality
all individuals: 871
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 82

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 75
allele frequency: 7.228218966846569e-3
allele num: 10376
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507386192342478e-5
allele num: 66340
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.220452848967405e-5
allele num: 16076
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.498950314905528e-4
allele num: 11432
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157675387821255e-4
allele num: 8638
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.75e0

DP
type: SiteQuality
SIO_000300: 1.837705e6

MQ
type: SiteQuality
SIO_000300: 5.968e1

MQRankSum
type: SiteQuality
SIO_000300: 1.88e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.35e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.16e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.95e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.419e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66282
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.74737578726382e-5
allele num: 11432
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.244536030972898e-5
allele num: 16014
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.04e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.3e-1

DP
type: SiteQuality
SIO_000300: 1.831427e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.709e0

MQRankSum
type: SiteQuality
SIO_000300: 3.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 3.15e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.12e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.513912859175826e-5
allele num: 66054
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10332
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15626
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.36e-1

FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.642e1

ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.813636e6

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

MQRankSum
type: SiteQuality
SIO_000300: -3.224e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.56e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.807e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3330
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.515427047341941e-5
allele num: 65988
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15540
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10326
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.235e0

DP
type: SiteQuality
SIO_000300: 1.809291e6

MQRankSum
type: SiteQuality
SIO_000300: -1.65e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.45e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 3.2e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

GenotypeQuality
all individuals: 1942
bin: 8.25e1
variant carriers: 8

GenotypeQuality
all individuals: 581
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2554
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5346
bin: 9.75e1
variant carriers: 1378

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3215
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 39
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 954
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 2717
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 137
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 330
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 233
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32039
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 8798
bin: 6.75e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 699
allele frequency: 1.062762269658821e-2
allele num: 65772
num of homozygotes: 4

South Asian
type: Population
allele count: 605
allele frequency: 3.98708316857783e-2
allele num: 15174
num of homozygotes: 16

Latino
type: Population
allele count: 24
allele frequency: 2.115282919090428e-3
allele num: 11346
num of homozygotes: 0

Other
type: Population
allele count: 11
allele frequency: 1.244343891402715e-2
allele num: 884
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.322340919647004e-4
allele num: 8612
num of homozygotes: 0

African
type: Population
allele count: 15
allele frequency: 1.455745341614907e-3
allele num: 10304
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 64
allele frequency: 9.858287122612447e-3
allele num: 6492
num of homozygotes: 1

QD
type: SiteQuality
SIO_000300: 1.333e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.372e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.68e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.59e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.795251e6

FS
type: SiteQuality
SIO_000300: 1.364e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.71e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.31e-1

GenotypeQuality
all individuals: 4034
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 186
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 721
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 812
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 966
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variant carriers: 0

GenotypeQuality
all individuals: 907
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 392
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11314
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.10407446970853e-5
allele num: 65530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14738
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10268
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6440
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.93e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

QD
type: SiteQuality
SIO_000300: 1.427e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.27e0

FS
type: SiteQuality
SIO_000300: 1.901e1

DP
type: SiteQuality
SIO_000300: 1.747108e6

MQRankSum
type: SiteQuality
SIO_000300: -4.5e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.772e0

GenotypeQuality
all individuals: 2649
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 721
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variant carriers: 0

GenotypeQuality
all individuals: 56
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variant carriers: 0

GenotypeQuality
all individuals: 24
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 392
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variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 308
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variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3536
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8497
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11314
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6440
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14738
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10268
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.526018617427133e-5
allele num: 65530
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.27e0

MQ
type: SiteQuality
SIO_000300: 5.93e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.54e-1

FS
type: SiteQuality
SIO_000300: 1.901e1

MQRankSum
type: SiteQuality
SIO_000300: -4.5e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.772e0

DP
type: SiteQuality
SIO_000300: 1.747108e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

QD
type: SiteQuality
SIO_000300: 1.427e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.7e-2

GenotypeQuality
all individuals: 1159
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1308
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
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variant carriers: 0

GenotypeQuality
all individuals: 8188
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variant carriers: 0

GenotypeQuality
all individuals: 2544
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 741
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variant carriers: 0

GenotypeQuality
all individuals: 335
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variant carriers: 0

GenotypeQuality
all individuals: 116
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variant carriers: 0

GenotypeQuality
all individuals: 945
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 245
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variant carriers: 0

GenotypeQuality
all individuals: 698
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4005
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3090
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10188
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11256
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65156
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.023458350891979e-5
allele num: 14238
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.856e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.4e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.95e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

DP
type: SiteQuality
SIO_000300: 1.705113e6

QD
type: SiteQuality
SIO_000300: 1.33e1

MQ
type: SiteQuality
SIO_000300: 5.946e1

VQSLOD
type: SiteQuality
SIO_000300: 5.77e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.38e-1

GenotypeQuality
all individuals: 1372
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 775
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variant carriers: 0

GenotypeQuality
all individuals: 298
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variant carriers: 0

GenotypeQuality
all individuals: 50
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GenotypeQuality
all individuals: 243
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variant carriers: 0

GenotypeQuality
all individuals: 97
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variant carriers: 0

GenotypeQuality
all individuals: 394
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GenotypeQuality
all individuals: 3075
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variant carriers: 0

GenotypeQuality
all individuals: 1200
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variant carriers: 0

GenotypeQuality
all individuals: 2504
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variant carriers: 0

GenotypeQuality
all individuals: 1866
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variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8115
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3997
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6384
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11246
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.535626535626536e-5
allele num: 65120
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10180
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14202
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.14e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -6.04e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.1e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.54e-1

DP
type: SiteQuality
SIO_000300: 1.699035e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.044e0

MQ
type: SiteQuality
SIO_000300: 5.932e1

QD
type: SiteQuality
SIO_000300: 1.483e1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 7128
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 337
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 692
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1468
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 520
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variant carriers: 0

GenotypeQuality
all individuals: 1959
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variant carriers: 0

GenotypeQuality
all individuals: 3517
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 697
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variant carriers: 0

GenotypeQuality
all individuals: 2355
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 908
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2512
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3956
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 21804
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1629
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8430
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13402
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.067827348567283e-5
allele num: 11028
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9904
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63780
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6200
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.12e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.303e0

MQ
type: SiteQuality
SIO_000300: 5.919e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

DP
type: SiteQuality
SIO_000300: 1.553996e6

MQRankSum
type: SiteQuality
SIO_000300: 5.590000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.34e-1

QD
type: SiteQuality
SIO_000300: 2.28e0

GenotypeQuality
all individuals: 1909
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3208
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 370
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 905
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 748
bin: 7.5e0
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GenotypeQuality
all individuals: 1617
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 645
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 454
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variant carriers: 0

GenotypeQuality
all individuals: 3952
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variant carriers: 1

GenotypeQuality
all individuals: 1724
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2391
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8414
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6140
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9874
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 824
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63552
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10996
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.508634930169695e-5
allele num: 13318
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.722e0

MQRankSum
type: SiteQuality
SIO_000300: -2.2e-2

FS
type: SiteQuality
SIO_000300: 1.6951e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.409e0

DP
type: SiteQuality
SIO_000300: 1.545491e6

ClippingRankSum
type: SiteQuality
SIO_000300: 6.75e-1

QD
type: SiteQuality
SIO_000300: 1.354e1

VQSLOD
type: SiteQuality
SIO_000300: -3.646e0

GenotypeQuality
all individuals: 3650
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7126
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18380
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 709
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2534
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1398
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 790
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1608
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 902
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2415
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2663
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3829
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8384
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13124
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10934
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6074
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.174804749507905e-5
allele num: 62996
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.86e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

FS
type: SiteQuality
SIO_000300: 3.605e0

VQSLOD
type: SiteQuality
SIO_000300: -1.708e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.25e-1

QD
type: SiteQuality
SIO_000300: 1.361e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

MQ
type: SiteQuality
SIO_000300: 5.855e1

DP
type: SiteQuality
SIO_000300: 1.519046e6

GenotypeQuality
all individuals: 3385
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 609
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3877
bin: 3.25e1
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GenotypeQuality
all individuals: 893
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2309
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1987
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3905
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 16086
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1727
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 537
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variant carriers: 0

GenotypeQuality
all individuals: 1563
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 756
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.219988936013277e-5
allele num: 10846
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.623745656480369e-5
allele num: 61586
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8282
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.138122728244601e-4
allele num: 9354
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12946
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5630
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.89e-1

QD
type: SiteQuality
SIO_000300: 2.22e0

VQSLOD
type: SiteQuality
SIO_000300: -1.135e1

FS
type: SiteQuality
SIO_000300: 4.6897e1

DP
type: SiteQuality
SIO_000300: 1.498642e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.67e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.269e0

MQRankSum
type: SiteQuality
SIO_000300: -3.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.4e-3

MQ
type: SiteQuality
SIO_000300: 5.906e1

GenotypeQuality
all individuals: 16086
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 762
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1563
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3385
bin: 4.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2309
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 609
bin: 1.25e1
variant carriers: 5

GenotypeQuality
all individuals: 2581
bin: 2.75e1
variant carriers: 6

GenotypeQuality
all individuals: 1727
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3757
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 893
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3877
bin: 3.25e1
variant carriers: 2

Other
type: Population
allele count: 1
allele frequency: 1.322751322751323e-3
allele num: 756
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 7.483429548856104e-4
allele num: 9354
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8282
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 5
allele frequency: 8.880994671403197e-4
allele num: 5630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.623745656480369e-4
allele num: 61586
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12946
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10846
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.906e1

MQRankSum
type: SiteQuality
SIO_000300: -3.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.89e-1

QD
type: SiteQuality
SIO_000300: 2.22e0

FS
type: SiteQuality
SIO_000300: 4.6897e1

DP
type: SiteQuality
SIO_000300: 1.498642e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.269e0

VQSLOD
type: SiteQuality
SIO_000300: -1.135e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.4e-3

GenotypeQuality
all individuals: 629
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2524
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2018
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 628
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 757
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3809
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2533
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3669
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5022
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3706
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15203
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8364
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9934
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6226
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10936
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12764
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.242e1

MQRankSum
type: SiteQuality
SIO_000300: -1.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -2.586e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.04e-1

DP
type: SiteQuality
SIO_000300: 1.527977e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.141e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.349e0

GenotypeQuality
all individuals: 363
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 571
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 844
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1053
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 771
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1847
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 614
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1318
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2012
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 801
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30762
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 671
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 810
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10594
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62118
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.021033285685113e-4
allele num: 9794
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6052
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8176
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.46e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.843e0

MQRankSum
type: SiteQuality
SIO_000300: 4.8e-2

QD
type: SiteQuality
SIO_000300: 2.036e1

DP
type: SiteQuality
SIO_000300: 1.517721e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.0e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.37e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 363
bin: 1.25e1
variant carriers: 153

GenotypeQuality
all individuals: 1847
bin: 3.25e1
variant carriers: 527

GenotypeQuality
all individuals: 801
bin: 9.25e1
variant carriers: 682

GenotypeQuality
all individuals: 671
bin: 4.25e1
variant carriers: 421

GenotypeQuality
all individuals: 7437
bin: 6.25e1
variant carriers: 954

GenotypeQuality
all individuals: 1089
bin: 8.25e1
variant carriers: 926

GenotypeQuality
all individuals: 1053
bin: 4.75e1
variant carriers: 811

GenotypeQuality
all individuals: 1318
bin: 3.75e1
variant carriers: 644

GenotypeQuality
all individuals: 486
bin: 1.75e1
variant carriers: 263

GenotypeQuality
all individuals: 614
bin: 8.75e1
variant carriers: 548

GenotypeQuality
all individuals: 1250
bin: 7.75e1
variant carriers: 970

GenotypeQuality
all individuals: 2012
bin: 6.75e1
variant carriers: 1014

African
type: Population
allele count: 3318
allele frequency: 3.387788441903206e-1
allele num: 9794
num of homozygotes: 542

European (Non-Finnish)
type: Population
allele count: 28759
allele frequency: 4.629736952252165e-1
allele num: 62118
num of homozygotes: 6365

Latino
type: Population
allele count: 5427
allele frequency: 5.12271096847272e-1
allele num: 10594
num of homozygotes: 1300

Other
type: Population
allele count: 375
allele frequency: 4.62962962962963e-1
allele num: 810
num of homozygotes: 85

South Asian
type: Population
allele count: 5210
allele frequency: 4.14412981228126e-1
allele num: 12572
num of homozygotes: 1015

East Asian
type: Population
allele count: 4129
allele frequency: 5.050146771037182e-1
allele num: 8176
num of homozygotes: 1041

European (Finnish)
type: Population
allele count: 2783
allele frequency: 4.598479841374752e-1
allele num: 6052
num of homozygotes: 654

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.517721e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.46e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.843e0

MQRankSum
type: SiteQuality
SIO_000300: 4.8e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.12e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.37e0

QD
type: SiteQuality
SIO_000300: 2.036e1

GenotypeQuality
all individuals: 2090
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3668
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2721
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1062
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2472
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2701
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2376
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 715
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 589
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4717
bin: 1.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5144
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 622
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6806
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.16198001394376e-4
allele num: 8606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52246
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 9.95461e5

VQSLOD
type: SiteQuality
SIO_000300: -5.131e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.16e0

QD
type: SiteQuality
SIO_000300: 7.82e0

MQRankSum
type: SiteQuality
SIO_000300: -6.94e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 5.73e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.48e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1061
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8587
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2268
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 441
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 585
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variant carriers: 0

GenotypeQuality
all individuals: 720
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5385
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6730
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 529
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2334
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6746
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5108
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.365184484389782e-4
allele num: 8456
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8352
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51670
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.7e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.932e0

VQSLOD
type: SiteQuality
SIO_000300: 5.49e0

DP
type: SiteQuality
SIO_000300: 9.92692e5

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.448e1

MQRankSum
type: SiteQuality
SIO_000300: 1.03e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.25e-1

GenotypeQuality
all individuals: 1061
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2438
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5385
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2482
bin: 9.75e1
variant carriers: 12

GenotypeQuality
all individuals: 2853
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 441
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2268
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8587
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11603
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2334
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 529
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6746
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 2.515966711825044e-4
allele num: 51670
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8456
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5108
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8352
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 9.92692e5

ClippingRankSum
type: SiteQuality
SIO_000300: -6.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.932e0

MQRankSum
type: SiteQuality
SIO_000300: 1.03e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.49e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.448e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.25e-1

GenotypeQuality
all individuals: 90
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 477
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 410
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 640
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 5.376344086021506e-3
allele num: 372
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 254
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 946
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 90
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 98
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.7898e4

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.9e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.01e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.77e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.93e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.11e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.93e-1

QD
type: SiteQuality
SIO_000300: 1.17e1

GenotypeQuality
all individuals: 52
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
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variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2951
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3214
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.607717041800643e-3
allele num: 622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 110
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 102
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -4.22e-2

FS
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MQRankSum
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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QD
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DP
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MQ
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 3.472222222222222e-3
allele num: 1152
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
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MQRankSum
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FS
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QD
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MQ
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InbreedingCoeff
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DP
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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East Asian
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Other
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num of homozygotes: 0

ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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FS
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MQRankSum
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MQ
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InbreedingCoeff
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DP
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 552
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 3.101736972704715e-4
allele num: 3224
num of homozygotes: 0

Latino
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num of homozygotes: 0

South Asian
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allele frequency: 2.003434459072696e-3
allele num: 6988
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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FS
type: SiteQuality
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MQ
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DP
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QD
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
type: SiteQuality
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MQRankSum
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SIO_000300: -8.400000000000001e-2

ClippingRankSum
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SIO_000300: -1.71e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele num: 7604
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQ
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SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
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InbreedingCoeff
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
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European (Non-Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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allele num: 7606
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QD
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BaseQRankSum
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FS
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DP
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MQ
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VQSLOD
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 0.0e0
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African
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East Asian
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Latino
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South Asian
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European (Finnish)
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Other
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QD
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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FS
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MQ
type: SiteQuality
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InbreedingCoeff
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DP
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MQRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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European (Finnish)
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European (Non-Finnish)
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South Asian
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Latino
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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MQ
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BaseQRankSum
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QD
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InbreedingCoeff
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MQRankSum
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FS
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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European (Non-Finnish)
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Other
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European (Finnish)
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South Asian
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Latino
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VQSLOD
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MQ
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BaseQRankSum
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MQRankSum
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QD
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InbreedingCoeff
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FS
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ClippingRankSum
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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Other
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Latino
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African
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European (Non-Finnish)
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East Asian
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BaseQRankSum
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QD
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VQSLOD
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FS
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MQRankSum
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DP
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.49e-2

MQ
type: SiteQuality
SIO_000300: 5.967e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.697e0

GenotypeQuality
all individuals: 157
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 610
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4704
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 132
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 1.595744680851064e-2
allele num: 188
num of homozygotes: 0

South Asian
type: Population
allele count: 235
allele frequency: 3.088853838065194e-2
allele num: 7608
num of homozygotes: 7

East Asian
type: Population
allele count: 1
allele frequency: 5.10204081632653e-3
allele num: 196
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 1.515151515151515e-2
allele num: 132
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.811594202898551e-3
allele num: 552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 36
allele frequency: 1.011804384485666e-2
allele num: 3558
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.58353e5

BaseQRankSum
type: SiteQuality
SIO_000300: -3.281e0

MQRankSum
type: SiteQuality
SIO_000300: 1.91e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.38e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.57e-1

QD
type: SiteQuality
SIO_000300: 1.386e1

FS
type: SiteQuality
SIO_000300: 5.95e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.04e-1

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 663
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4889
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 196
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.810567734682406e-4
allele num: 3558
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.18e0

MQRankSum
type: SiteQuality
SIO_000300: 1.47e0

DP
type: SiteQuality
SIO_000300: 1.53988e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.25e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.931e0

VQSLOD
type: SiteQuality
SIO_000300: -1.976e0

QD
type: SiteQuality
SIO_000300: 2.053e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.91e-1

GenotypeQuality
all individuals: 5
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 2.25e1
variant carriers: 5

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 3

GenotypeQuality
all individuals: 11
bin: 3.25e1
variant carriers: 3

GenotypeQuality
all individuals: 462
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1338
bin: 9.75e1
variant carriers: 1335

GenotypeQuality
all individuals: 65
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 85
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4090
bin: 6.25e1
variant carriers: 4

GenotypeQuality
all individuals: 17
bin: 8.25e1
variant carriers: 1

South Asian
type: Population
allele count: 1024
allele frequency: 1.345951629863302e-1
allele num: 7608
num of homozygotes: 68

European (Non-Finnish)
type: Population
allele count: 241
allele frequency: 6.758272574312955e-2
allele num: 3566
num of homozygotes: 8

East Asian
type: Population
allele count: 71
allele frequency: 3.622448979591837e-1
allele num: 196
num of homozygotes: 15

Latino
type: Population
allele count: 22
allele frequency: 1.170212765957447e-1
allele num: 188
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

Other
type: Population
allele count: 11
allele frequency: 8.333333333333333e-2
allele num: 132
num of homozygotes: 1

African
type: Population
allele count: 72
allele frequency: 1.309090909090909e-1
allele num: 550
num of homozygotes: 6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.57e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.71e0

QD
type: SiteQuality
SIO_000300: 1.619e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.16e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.79e0

MQRankSum
type: SiteQuality
SIO_000300: 2.11e-1

DP
type: SiteQuality
SIO_000300: 1.88979e5

ClippingRankSum
type: SiteQuality
SIO_000300: -1.35e-1

GenotypeQuality
all individuals: 25
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 196
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.313370107696349e-4
allele num: 7614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 552
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3582
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.963e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.0e-2

FS
type: SiteQuality
SIO_000300: 1.212e0

DP
type: SiteQuality
SIO_000300: 1.57046e5

ClippingRankSum
type: SiteQuality
SIO_000300: 3.92e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-2

QD
type: SiteQuality
SIO_000300: 1.048e1

VQSLOD
type: SiteQuality
SIO_000300: 3.25e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.22e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.37e-1