http://identifiers.org/exac.variant/10-31134467-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31134467
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31134467
    reference: chr 10
allele count: 3
allele frequency: 2.552018646749579e-5
allele num: 117554
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1880T>G
  hgvsp: ENSP00000413060.1:p.Leu627Arg
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+4684T>G
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1763T>G
  hgvsp: ENSP00000445461.1:p.Leu588Arg
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1910T>G
  hgvsp: ENSP00000387546.1:p.Leu637Arg
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1880T>G
  hgvsp: ENSP00000333571.6:p.Leu627Arg
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1880T>G
  hgvsp: ENSP00000410898.2:p.Leu627Arg
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1910T>G
  hgvsp: ENSP00000412363.1:p.Leu637Arg
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1910T>G
  hgvsp: ENSP00000354663.3:p.Leu637Arg
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.602T>G
  hgvsp: ENSP00000364460.1:p.Leu201Arg
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1910T>G
  hgvsp: ENSP00000406934.2:p.Leu637Arg
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13768
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2422
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18612
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7244
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4249
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7135
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu637Arg
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

10-31134470-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31134470
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31134469
    reference: chr 10
allele count: 14
allele frequency: 1.193459840076381e-4
allele num: 117306
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1906delC
  hgvsp: ENSP00000354663.3:p.Leu636PhefsTer2
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1906delC
  hgvsp: ENSP00000412363.1:p.Leu636PhefsTer2
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1906delC
  hgvsp: ENSP00000387546.1:p.Leu636PhefsTer2
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1906delC
  hgvsp: ENSP00000406934.2:p.Leu636PhefsTer2
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1876delC
  hgvsp: ENSP00000410898.2:p.Leu626PhefsTer2
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1876delC
  hgvsp: ENSP00000333571.6:p.Leu626PhefsTer2
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1759delC
  hgvsp: ENSP00000445461.1:p.Leu587PhefsTer2
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+4680delC
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.598delC
  hgvsp: ENSP00000364460.1:p.Leu200PhefsTer2
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1876delC
  hgvsp: ENSP00000413060.1:p.Leu626PhefsTer2
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6996
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13755
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2420
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7245
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18539
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4249
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8988
  bin: 9.75e1
  variant carriers: 14
hgvs: p.Leu636PhefsTer2
num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: AG
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD

10-31134472-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31134472
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31134472
    reference: chr 10
allele count: 12
allele frequency: 1.024537677373085e-4
allele num: 117126
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1758C>T
  hgvsp: ENST00000538351.2:c.1758C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1875C>T
  hgvsp: ENST00000444692.2:c.1875C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1905C>T
  hgvsp: ENST00000361310.3:c.1905C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1905C>T
  hgvsp: ENST00000413025.1:c.1905C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1905C>T
  hgvsp: ENST00000436087.2:c.1905C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1875C>T
  hgvsp: ENST00000331737.6:c.1875C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1905C>T
  hgvsp: ENST00000442986.1:c.1905C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1875C>T
  hgvsp: ENST00000452305.1:c.1875C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.597C>T
  hgvsp: ENST00000375311.1:c.597C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+4679C>T
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 13747
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7243
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18493
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2419
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6918
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Phe635Phe
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: QD
site quality: ReadPosRankSum

10-31134475-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31134475
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31134475
    reference: chr 10
allele count: 11
allele frequency: 9.418614607415018e-5
allele num: 116790
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1872C>T
  hgvsp: ENST00000331737.6:c.1872C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1902C>T
  hgvsp: ENST00000413025.1:c.1902C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1872C>T
  hgvsp: ENST00000452305.1:c.1872C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1902C>T
  hgvsp: ENST00000436087.2:c.1902C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1902C>T
  hgvsp: ENST00000442986.1:c.1902C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.594C>T
  hgvsp: ENST00000375311.1:c.594C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1902C>T
  hgvsp: ENST00000361310.3:c.1902C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+4676C>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1755C>T
  hgvsp: ENST00000538351.2:c.1755C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1872C>T
  hgvsp: ENST00000444692.2:c.1872C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1408
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6746
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7242
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18412
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4251
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13723
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2419
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 8968
  bin: 9.75e1
  variant carriers: 11
hgvs: p.Asp634Asp
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

10-31134477-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31134477
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31134477
    reference: chr 10
allele count: 2
allele frequency: 1.71638460746284e-5
allele num: 116524
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1870G>C
  hgvsp: ENSP00000413060.1:p.Asp624His
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+4674G>C
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1753G>C
  hgvsp: ENSP00000445461.1:p.Asp585His
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1900G>C
  hgvsp: ENSP00000354663.3:p.Asp634His
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1900G>C
  hgvsp: ENSP00000406934.2:p.Asp634His
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1900G>C
  hgvsp: ENSP00000387546.1:p.Asp634His
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1870G>C
  hgvsp: ENSP00000333571.6:p.Asp624His
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1900G>C
  hgvsp: ENSP00000412363.1:p.Asp634His
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1870G>C
  hgvsp: ENSP00000410898.2:p.Asp624His
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.592G>C
  hgvsp: ENSP00000364460.1:p.Asp198His
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1407
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13710
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4253
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1324
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18342
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7243
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1104
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6565
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2420
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asp634His
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum

10-31134477-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31134477
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31134477
    reference: chr 10
allele count: 1
allele frequency: 8.581923037314201e-6
allele num: 116524
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1900G>A
  hgvsp: ENSP00000412363.1:p.Asp634Asn
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1900G>A
  hgvsp: ENSP00000354663.3:p.Asp634Asn
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+4674G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1900G>A
  hgvsp: ENSP00000387546.1:p.Asp634Asn
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1870G>A
  hgvsp: ENSP00000333571.6:p.Asp624Asn
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1870G>A
  hgvsp: ENSP00000413060.1:p.Asp624Asn
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.592G>A
  hgvsp: ENSP00000364460.1:p.Asp198Asn
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1870G>A
  hgvsp: ENSP00000410898.2:p.Asp624Asn
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1753G>A
  hgvsp: ENSP00000445461.1:p.Asp585Asn
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1900G>A
  hgvsp: ENSP00000406934.2:p.Asp634Asn
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13710
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1407
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4253
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18342
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1324
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1104
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6565
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7243
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2420
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7834
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Asp634Asn
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

10-31134480-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31134480
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31134480
    reference: chr 10
allele count: 1
allele frequency: 8.609704859317423e-6
allele num: 116148
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1750G>C
  hgvsp: ENSP00000445461.1:p.Glu584Gln
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1867G>C
  hgvsp: ENSP00000333571.6:p.Glu623Gln
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1897G>C
  hgvsp: ENSP00000354663.3:p.Glu633Gln
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1897G>C
  hgvsp: ENSP00000387546.1:p.Glu633Gln
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.589G>C
  hgvsp: ENSP00000364460.1:p.Glu197Gln
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1867G>C
  hgvsp: ENSP00000413060.1:p.Glu623Gln
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1867G>C
  hgvsp: ENSP00000410898.2:p.Glu623Gln
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1897G>C
  hgvsp: ENSP00000412363.1:p.Glu633Gln
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+4671G>C
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1897G>C
  hgvsp: ENSP00000406934.2:p.Glu633Gln
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1448
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13693
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2419
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6326
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1407
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4250
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7240
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18221
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Glu633Gln
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum

10-31134511-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31134511
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31134511
    reference: chr 10
allele count: 1
allele frequency: 8.94598414771609e-6
allele num: 111782
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1845-9C>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1728-9C>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.567-9C>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1875-9C>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+4640C>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1875-9C>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1875-9C>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1875-9C>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1845-9C>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1845-9C>T
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13406
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2413
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1404
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3834
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16725
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4225
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7203
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5149
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

10-31134512-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31134512
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31134512
    reference: chr 10
allele count: 1
allele frequency: 8.961055253866696e-6
allele num: 111594
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+4639G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1875-10G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1875-10G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.567-10G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1845-10G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1875-10G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1845-10G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1728-10G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1875-10G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1845-10G>A
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3385
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1404
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16702
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2872
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4220
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7196
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13403
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3777
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2412
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: African
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum

http://identifiers.org/exac.variant/10-31134514-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31134514
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31134514
    reference: chr 10
allele count: 2
allele frequency: 1.801704412374106e-5
allele num: 111006
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+4637T>G
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1845-12T>G
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1875-12T>G
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.567-12T>G
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1845-12T>G
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1845-12T>G
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1875-12T>G
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1875-12T>G
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1728-12T>G
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1875-12T>G
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13331
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7192
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3507
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4219
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3585
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16523
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2410
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3039
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1404
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1396
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum

10-31134523-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31134523
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31134523
    reference: chr 10
allele count: 1
allele frequency: 9.097194425239256e-6
allele num: 109924
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.567-21C>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+4628C>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1845-21C>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1728-21C>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1845-21C>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1875-21C>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1875-21C>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1875-21C>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1875-21C>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1845-21C>T
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3448
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7161
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3611
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4213
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1404
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2405
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13109
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3228
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16094
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8915
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2979
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: East Asian
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum

10-31134528-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31134528
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31134528
    reference: chr 10
allele count: 1
allele frequency: 9.184085816097865e-6
allele num: 108884
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1875-26A>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.567-26A>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1728-26A>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1875-26A>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1845-26A>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1875-26A>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1845-26A>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+4623A>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1845-26A>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1875-26A>T
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3539
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3423
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2404
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3367
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4205
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7128
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2035
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1404
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15604
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12839
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4842
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7074
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: African
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: DP

10-31134529-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31134529
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31134529
    reference: chr 10
allele count: 1
allele frequency: 9.182061923825615e-6
allele num: 108908
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1875-27T>C
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1845-27T>C
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1875-27T>C
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1875-27T>C
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1875-27T>C
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+4622T>C
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1728-27T>C
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1845-27T>C
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1845-27T>C
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.567-27T>C
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7123
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3461
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4205
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3527
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2047
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3380
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15591
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1404
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2404
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12820
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2041
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8913
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD

10-31134538-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31134538
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31134538
    reference: chr 10
allele count: 1
allele frequency: 9.303710319675487e-6
allele num: 107484
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+4613A>G
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1728-36A>G
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1845-36A>G
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1845-36A>G
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1875-36A>G
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1875-36A>G
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1875-36A>G
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.567-36A>G
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1845-36A>G
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1875-36A>G
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2401
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14153
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1404
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2718
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3251
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3507
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4195
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12141
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3643
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2403
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7058
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6718
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

10-31134547-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31134547
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31134547
    reference: chr 10
allele count: 1
allele frequency: 9.418679124439588e-6
allele num: 106172
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1875-45C>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1728-45C>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1875-45C>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1845-45C>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1845-45C>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1875-45C>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1845-45C>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+4604C>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.567-45C>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1875-45C>T
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11168
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4291
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4082
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2757
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2391
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6155
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10953
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2488
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6932
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4175
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4235
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1075
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2246
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

10-31134548-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31134548
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31134548
    reference: chr 10
allele count: 0
allele frequency: 0.0e0
allele num: 105936
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1875-46G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1845-46G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1875-46G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.567-46G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1875-46G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1728-46G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1845-46G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1845-46G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1875-46G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+4603G>A
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2694
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10791
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4173
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4149
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6904
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6863
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2390
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10651
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4271
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2491
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2335
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5848
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 988
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD

10-31134549-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31134549
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31134549
    reference: chr 10
allele count: 1
allele frequency: 9.431648840850358e-6
allele num: 106026
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.567-47T>C
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1875-47T>C
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1875-47T>C
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1845-47T>C
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1728-47T>C
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1875-47T>C
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1845-47T>C
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1845-47T>C
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1875-47T>C
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+4602T>C
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6907
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2390
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4259
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10572
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4171
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4159
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2693
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2498
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10838
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6894
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1552
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1120
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2759
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

10-31134551-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31134551
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31134551
    reference: chr 10
allele count: 5
allele frequency: 4.734938161707608e-5
allele num: 105598
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1875-49A>G
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1845-49A>G
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1845-49A>G
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1728-49A>G
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1875-49A>G
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1845-49A>G
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1875-49A>G
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+4600A>G
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.567-49A>G
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1875-49A>G
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2390
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2594
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6823
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4240
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4163
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2512
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4253
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7971
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9978
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10450
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1586
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3518
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2431
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

10-31137410-CCAAAT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137410
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137405
    reference: chr 10
allele count: 1
allele frequency: 8.716571946584848e-6
allele num: 114724
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1736_183+1740delATTTG
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1727+45_1727+49delATTTG
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1844+45_1844+49delATTTG
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1874+45_1874+49delATTTG
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1844+45_1844+49delATTTG
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1874+45_1874+49delATTTG
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1844+45_1844+49delATTTG
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1874+45_1874+49delATTTG
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.566+45_566+49delATTTG
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1874+45_1874+49delATTTG
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2687
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9589
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4948
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11845
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7250
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6296
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4232
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3369
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 799
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: CCAAAT
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/10-31137413-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137413
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137413
    reference: chr 10
allele count: 3
allele frequency: 2.612557693982409e-5
allele num: 114830
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1874+47T>G
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.566+47T>G
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1874+47T>G
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1874+47T>G
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1727+47T>G
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1844+47T>G
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1844+47T>G
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1844+47T>G
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1874+47T>G
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1738T>G
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6293
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9621
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7254
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2677
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3370
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2135
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4396
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11862
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4950
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2002
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 604
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: African
reference allele: A
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/10-31137419-AAC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137419
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137417
    reference: chr 10
allele count: 1
allele frequency: 8.696862172128297e-6
allele num: 114984
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1874+39_1874+40delGT
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1844+39_1844+40delGT
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1727+39_1727+40delGT
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.566+39_566+40delGT
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1844+39_1844+40delGT
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1844+39_1844+40delGT
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1874+39_1874+40delGT
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1874+39_1874+40delGT
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1730_183+1731delGT
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1874+39_1874+40delGT
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2675
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11881
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3370
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2213
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4953
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9693
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4721
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7268
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6301
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4658
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2817
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: AAC
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/10-31137421-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137421
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137421
    reference: chr 10
allele count: 1
allele frequency: 8.703674691454733e-6
allele num: 114894
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1730G>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1874+39G>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1874+39G>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1874+39G>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1844+39G>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1844+39G>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.566+39G>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1844+39G>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1727+39G>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1874+39G>T
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4776
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11884
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2664
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6307
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9731
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4955
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2201
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7269
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3370
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2374
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

10-31137427-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137427
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137427
    reference: chr 10
allele count: 1
allele frequency: 8.676639017110332e-6
allele num: 115252
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1844+33G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1724G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1874+33G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1844+33G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1727+33G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1874+33G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1844+33G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1874+33G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1874+33G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.566+33G>A
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2135
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4953
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6306
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2643
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11991
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7285
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3374
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2113
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9756
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4957
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1763
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13322
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff

10-31137434-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137434
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137434
    reference: chr 10
allele count: 1
allele frequency: 8.64274355251331e-6
allele num: 115704
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1717G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1874+26G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1874+26G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1874+26G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1844+26G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1844+26G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1844+26G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1874+26G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.566+26G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1727+26G>A
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6317
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5352
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12041
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2516
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2135
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3374
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1899
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4960
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9803
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7297
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD

10-31137443-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137443
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137443
    reference: chr 10
allele count: 1
allele frequency: 8.563256777817739e-6
allele num: 116778
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1874+17T>C
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1727+17T>C
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1844+17T>C
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1844+17T>C
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1708T>C
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1874+17T>C
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.566+17T>C
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1844+17T>C
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1874+17T>C
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1874+17T>C
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9836
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12186
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6320
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1552
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4959
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2118
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6055
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7306
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3374
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2263
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP

10-31137450-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137450
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137450
    reference: chr 10
allele count: 2
allele frequency: 1.703316356946976e-5
allele num: 117418
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1874+10A>C
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1844+10A>C
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1701A>C
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.566+10A>C
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1874+10A>C
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1874+10A>C
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1874+10A>C
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1844+10A>C
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1844+10A>C
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1727+10A>C
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7311
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9862
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1846
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6320
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12298
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4960
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3374
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6550
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4867
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2009
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2647
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD

10-31137452-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137452
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137452
    reference: chr 10
allele count: 1
allele frequency: 8.5090451149572e-6
allele num: 117522
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1874+8C>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1844+8C>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1844+8C>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1874+8C>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1699C>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1727+8C>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1844+8C>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1874+8C>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.566+8C>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1874+8C>A
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4961
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12325
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6602
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3374
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9876
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7313
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6320
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
hgvs: c.1874+8C>A
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

10-31137453-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137453
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137453
    reference: chr 10
allele count: 1
allele frequency: 8.504124500382685e-6
allele num: 117590
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1727+7G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1874+7G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1698G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1874+7G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1874+7G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1844+7G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.566+7G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1874+7G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1844+7G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1844+7G>A
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1706
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6321
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7316
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9888
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6635
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3374
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4961
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12371
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 2.75e1
  variant carriers: 0
hgvs: c.1874+7G>A
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: European (Finnish)
reference allele: C
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

http://identifiers.org/exac.variant/10-31137457-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137457
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137457
    reference: chr 10
allele count: 1
allele frequency: 8.465393471488555e-6
allele num: 118128
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1874+3G>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1874+3G>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1874+3G>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1844+3G>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1727+3G>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1844+3G>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1844+3G>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1694G>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.566+3G>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1874+3G>T
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9920
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4961
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12487
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7314
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1502
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3374
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6882
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6324
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15243
  bin: 6.25e1
  variant carriers: 0
hgvs: c.1874+3G>T
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum

10-31137460-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137460
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137460
    reference: chr 10
allele count: 2
allele frequency: 1.686482840037103e-5
allele num: 118590
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1844G>C
  hgvsp: ENSP00000333571.6:p.Arg615Thr
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1874G>C
  hgvsp: ENSP00000387546.1:p.Arg625Thr
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1874G>C
  hgvsp: ENSP00000406934.2:p.Arg625Thr
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1874G>C
  hgvsp: ENSP00000412363.1:p.Arg625Thr
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1874G>C
  hgvsp: ENSP00000354663.3:p.Arg625Thr
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1844G>C
  hgvsp: ENSP00000410898.2:p.Arg615Thr
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1844G>C
  hgvsp: ENSP00000413060.1:p.Arg615Thr
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1691G>C
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.566G>C
  hgvsp: ENSP00000364460.1:p.Arg189Thr
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1727G>C
  hgvsp: ENSP00000445461.1:p.Arg576Thr
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7123
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2136
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6323
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4962
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3374
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9958
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12563
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7316
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg625Thr
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQRankSum

10-31137467-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137467
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137467
    reference: chr 10
allele count: 3
allele frequency: 2.510460251046025e-5
allele num: 119500
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1837T>C
  hgvsp: ENST00000452305.1:c.1837T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1867T>C
  hgvsp: ENST00000442986.1:c.1867T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.559T>C
  hgvsp: ENST00000375311.1:c.559T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1867T>C
  hgvsp: ENST00000361310.3:c.1867T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1837T>C
  hgvsp: ENST00000331737.6:c.1837T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1837T>C
  hgvsp: ENST00000444692.2:c.1837T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1684T>C
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1867T>C
  hgvsp: ENST00000413025.1:c.1867T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1720T>C
  hgvsp: ENST00000538351.2:c.1720T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1867T>C
  hgvsp: ENST00000436087.2:c.1867T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7322
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7648
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3375
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12755
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4966
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10020
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6325
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1795
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Leu623Leu
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

10-31137471-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137471
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137471
    reference: chr 10
allele count: 233
allele frequency: 1.944096787651231e-3
allele num: 119850
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1863A>G
  hgvsp: ENST00000442986.1:c.1863A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1833A>G
  hgvsp: ENST00000331737.6:c.1833A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1716A>G
  hgvsp: ENST00000538351.2:c.1716A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1833A>G
  hgvsp: ENST00000452305.1:c.1833A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1863A>G
  hgvsp: ENST00000436087.2:c.1863A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1833A>G
  hgvsp: ENST00000444692.2:c.1833A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1863A>G
  hgvsp: ENST00000413025.1:c.1863A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1680A>G
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.555A>G
  hgvsp: ENST00000375311.1:c.555A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1863A>G
  hgvsp: ENST00000361310.3:c.1863A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 6.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 10031
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 8.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 12821
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4930
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 3358
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2126
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 6.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 7833
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 7.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 8.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 7290
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 9.75e1
  variant carriers: 75
genotype depth: GenotypeDepth
  all individuals: 6293
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2376
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gly621Gly
num of homozygotes: 6
population: European (Finnish)
population: Other
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ

10-31137474-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137474
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137474
    reference: chr 10
allele count: 1
allele frequency: 8.32639467110741e-6
allele num: 120100
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1677G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1860G>A
  hgvsp: ENST00000442986.1:c.1860G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1830G>A
  hgvsp: ENST00000444692.2:c.1830G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1830G>A
  hgvsp: ENST00000331737.6:c.1830G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1830G>A
  hgvsp: ENST00000452305.1:c.1830G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1713G>A
  hgvsp: ENST00000538351.2:c.1713G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1860G>A
  hgvsp: ENST00000413025.1:c.1860G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.552G>A
  hgvsp: ENST00000375311.1:c.552G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1860G>A
  hgvsp: ENST00000361310.3:c.1860G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1860G>A
  hgvsp: ENST00000436087.2:c.1860G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12999
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3372
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7310
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6318
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10083
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4935
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7837
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Glu620Glu
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

10-31137479-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137479
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137479
    reference: chr 10
allele count: 7
allele frequency: 5.810478783451757e-5
allele num: 120472
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.547A>T
  hgvsp: ENSP00000364460.1:p.Met183Leu
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1672A>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1855A>T
  hgvsp: ENSP00000387546.1:p.Met619Leu
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1825A>T
  hgvsp: ENSP00000410898.2:p.Met609Leu
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1825A>T
  hgvsp: ENSP00000413060.1:p.Met609Leu
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1708A>T
  hgvsp: ENSP00000445461.1:p.Met570Leu
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1855A>T
  hgvsp: ENSP00000354663.3:p.Met619Leu
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1825A>T
  hgvsp: ENSP00000333571.6:p.Met609Leu
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1855A>T
  hgvsp: ENSP00000412363.1:p.Met619Leu
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1855A>T
  hgvsp: ENSP00000406934.2:p.Met619Leu
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13149
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2139
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4935
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10150
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6319
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7949
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3370
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7318
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2659
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Met619Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD

10-31137481-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137481
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137481
    reference: chr 10
allele count: 293
allele frequency: 2.430163890916329e-3
allele num: 120568
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1823G>A
  hgvsp: ENSP00000413060.1:p.Gly608Asp
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1670G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1853G>A
  hgvsp: ENSP00000406934.2:p.Gly618Asp
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1853G>A
  hgvsp: ENSP00000354663.3:p.Gly618Asp
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.545G>A
  hgvsp: ENSP00000364460.1:p.Gly182Asp
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1823G>A
  hgvsp: ENSP00000333571.6:p.Gly608Asp
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1853G>A
  hgvsp: ENSP00000387546.1:p.Gly618Asp
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1706G>A
  hgvsp: ENSP00000445461.1:p.Gly569Asp
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1823G>A
  hgvsp: ENSP00000410898.2:p.Gly608Asp
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1853G>A
  hgvsp: ENSP00000412363.1:p.Gly618Asp
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 9.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13212
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4921
  bin: 4.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 6.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 7283
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 6.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 6292
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3363
  bin: 5.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 7912
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 7.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 10154
  bin: 3.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 8.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 8.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 9.75e1
  variant carriers: 88
genotype depth: GenotypeDepth
  all individuals: 2144
  bin: 5.75e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly618Asp
num of homozygotes: 2
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ

10-31137490-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137490
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137490
    reference: chr 10
allele count: 1
allele frequency: 8.256411103221652e-6
allele num: 121118
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1814G>A
  hgvsp: ENSP00000410898.2:p.Ser605Asn
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1844G>A
  hgvsp: ENSP00000387546.1:p.Ser615Asn
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1814G>A
  hgvsp: ENSP00000413060.1:p.Ser605Asn
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1697G>A
  hgvsp: ENSP00000445461.1:p.Ser566Asn
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1844G>A
  hgvsp: ENSP00000412363.1:p.Ser615Asn
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.536G>A
  hgvsp: ENSP00000364460.1:p.Ser179Asn
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1661G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1844G>A
  hgvsp: ENSP00000354663.3:p.Ser615Asn
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1814G>A
  hgvsp: ENSP00000333571.6:p.Ser605Asn
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1844G>A
  hgvsp: ENSP00000406934.2:p.Ser615Asn
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4925
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10357
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13487
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8024
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6318
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7321
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3363
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser615Asn
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP

http://identifiers.org/exac.variant/10-31137492-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137492
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137492
    reference: chr 10
allele count: 1
allele frequency: 8.252867871585376e-6
allele num: 121170
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1842G>T
  hgvsp: ENSP00000406934.2:p.Met614Ile
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1812G>T
  hgvsp: ENSP00000410898.2:p.Met604Ile
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1659G>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1842G>T
  hgvsp: ENSP00000354663.3:p.Met614Ile
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.534G>T
  hgvsp: ENSP00000364460.1:p.Met178Ile
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1842G>T
  hgvsp: ENSP00000412363.1:p.Met614Ile
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1812G>T
  hgvsp: ENSP00000333571.6:p.Met604Ile
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1695G>T
  hgvsp: ENSP00000445461.1:p.Met565Ile
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1812G>T
  hgvsp: ENSP00000413060.1:p.Met604Ile
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1842G>T
  hgvsp: ENSP00000387546.1:p.Met614Ile
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4925
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8013
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3362
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13514
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6317
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10385
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7321
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Met614Ile
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

10-31137493-A-ATGTCTGTTCTTTGGTATGTC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137493
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137513
    reference: chr 10
allele count: 6
allele frequency: 4.950658437572197e-5
allele num: 121196
alternate allele: ATGTCTGTTCTTTGGTATGTC
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsp: ENSP00000410898.2:p.Met604ArgfsTer8
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsp: ENSP00000445461.1:p.Met565ArgfsTer8
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsp: ENSP00000387546.1:p.Met614ArgfsTer8
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsp: ENSP00000333571.6:p.Met604ArgfsTer8
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsp: ENSP00000413060.1:p.Met604ArgfsTer8
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsp: ENSP00000406934.2:p.Met614ArgfsTer8
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsp: ENSP00000354663.3:p.Met614ArgfsTer8
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsp: ENSP00000412363.1:p.Met614ArgfsTer8
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsp: ENSP00000364460.1:p.Met178ArgfsTer8
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 10380
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7321
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4925
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8026
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2143
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3363
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6319
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13519
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2669
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Met614ArgfsTer8
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Other
population: Latino
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: DP

10-31137494-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137494
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137494
    reference: chr 10
allele count: 4
allele frequency: 3.300057751010643e-5
allele num: 121210
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1657A>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1693A>T
  hgvsp: ENSP00000445461.1:p.Met565Leu
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1810A>T
  hgvsp: ENSP00000333571.6:p.Met604Leu
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1840A>T
  hgvsp: ENSP00000412363.1:p.Met614Leu
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1810A>T
  hgvsp: ENSP00000410898.2:p.Met604Leu
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1840A>T
  hgvsp: ENSP00000406934.2:p.Met614Leu
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1810A>T
  hgvsp: ENSP00000413060.1:p.Met604Leu
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1840A>T
  hgvsp: ENSP00000387546.1:p.Met614Leu
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.532A>T
  hgvsp: ENSP00000364460.1:p.Met178Leu
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1840A>T
  hgvsp: ENSP00000354663.3:p.Met614Leu
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8033
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3364
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2141
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10380
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13525
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4926
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6318
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7322
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Met614Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: T
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ

10-31137496-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137496
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137496
    reference: chr 10
allele count: 66
allele frequency: 5.444286798429405e-4
allele num: 121228
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1808A>G
  hgvsp: ENSP00000333571.6:p.Asp603Gly
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1838A>G
  hgvsp: ENSP00000387546.1:p.Asp613Gly
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1691A>G
  hgvsp: ENSP00000445461.1:p.Asp564Gly
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1808A>G
  hgvsp: ENSP00000413060.1:p.Asp603Gly
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1655A>G
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1838A>G
  hgvsp: ENSP00000412363.1:p.Asp613Gly
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.530A>G
  hgvsp: ENSP00000364460.1:p.Asp177Gly
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1838A>G
  hgvsp: ENSP00000354663.3:p.Asp613Gly
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1838A>G
  hgvsp: ENSP00000406934.2:p.Asp613Gly
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1808A>G
  hgvsp: ENSP00000410898.2:p.Asp603Gly
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7311
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2136
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10386
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8035
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3355
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6309
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 9.75e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 8.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 4915
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 13541
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Asp613Gly
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ

10-31137517-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137517
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137517
    reference: chr 10
allele count: 3
allele frequency: 2.471984179301253e-5
allele num: 121360
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1787G>A
  hgvsp: ENSP00000413060.1:p.Gly596Glu
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1817G>A
  hgvsp: ENSP00000412363.1:p.Gly606Glu
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1787G>A
  hgvsp: ENSP00000333571.6:p.Gly596Glu
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1817G>A
  hgvsp: ENSP00000354663.3:p.Gly606Glu
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1787G>A
  hgvsp: ENSP00000410898.2:p.Gly596Glu
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1817G>A
  hgvsp: ENSP00000406934.2:p.Gly606Glu
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1817G>A
  hgvsp: ENSP00000387546.1:p.Gly606Glu
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.509G>A
  hgvsp: ENSP00000364460.1:p.Gly170Glu
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1670G>A
  hgvsp: ENSP00000445461.1:p.Gly557Glu
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1634G>A
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3356
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6323
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2137
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4922
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13650
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7971
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10458
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7326
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2512
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gly606Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum

10-31137519-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137519
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137519
    reference: chr 10
allele count: 1
allele frequency: 8.239539904091756e-6
allele num: 121366
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1815A>G
  hgvsp: ENST00000442986.1:c.1815A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.507A>G
  hgvsp: ENST00000375311.1:c.507A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1785A>G
  hgvsp: ENST00000452305.1:c.1785A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1785A>G
  hgvsp: ENST00000331737.6:c.1785A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1632A>G
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1668A>G
  hgvsp: ENST00000538351.2:c.1668A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1815A>G
  hgvsp: ENST00000436087.2:c.1815A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1815A>G
  hgvsp: ENST00000413025.1:c.1815A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1815A>G
  hgvsp: ENST00000361310.3:c.1815A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1785A>G
  hgvsp: ENST00000444692.2:c.1785A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7968
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13659
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3357
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4920
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7326
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6323
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10457
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro605Pro
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum

10-31137520-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137520
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137520
    reference: chr 10
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.506C>T
  hgvsp: ENSP00000364460.1:p.Pro169Leu
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1631C>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1784C>T
  hgvsp: ENSP00000410898.2:p.Pro595Leu
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1784C>T
  hgvsp: ENSP00000413060.1:p.Pro595Leu
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1667C>T
  hgvsp: ENSP00000445461.1:p.Pro556Leu
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1814C>T
  hgvsp: ENSP00000412363.1:p.Pro605Leu
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1784C>T
  hgvsp: ENSP00000333571.6:p.Pro595Leu
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1814C>T
  hgvsp: ENSP00000387546.1:p.Pro605Leu
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1814C>T
  hgvsp: ENSP00000354663.3:p.Pro605Leu
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1814C>T
  hgvsp: ENSP00000406934.2:p.Pro605Leu
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3358
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7966
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7325
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6323
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4923
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13661
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10455
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro605Leu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/10-31137525-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137525
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137525
    reference: chr 10
allele count: 1
allele frequency: 8.2387253044209e-6
allele num: 121378
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1809G>T
  hgvsp: ENST00000436087.2:c.1809G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1662G>T
  hgvsp: ENST00000538351.2:c.1662G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1779G>T
  hgvsp: ENST00000444692.2:c.1779G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1809G>T
  hgvsp: ENST00000442986.1:c.1809G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.501G>T
  hgvsp: ENST00000375311.1:c.501G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1809G>T
  hgvsp: ENST00000361310.3:c.1809G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1626G>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1779G>T
  hgvsp: ENST00000452305.1:c.1779G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1779G>T
  hgvsp: ENST00000331737.6:c.1779G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1809G>T
  hgvsp: ENST00000413025.1:c.1809G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3357
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4927
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7325
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10464
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7961
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6327
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13660
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu603Leu
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP

10-31137537-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137537
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137537
    reference: chr 10
allele count: 169
allele frequency: 1.392206936320949e-3
allele num: 121390
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1650G>A
  hgvsp: ENST00000538351.2:c.1650G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1797G>A
  hgvsp: ENST00000436087.2:c.1797G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1797G>A
  hgvsp: ENST00000442986.1:c.1797G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1797G>A
  hgvsp: ENST00000361310.3:c.1797G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1767G>A
  hgvsp: ENST00000452305.1:c.1767G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1767G>A
  hgvsp: ENST00000444692.2:c.1767G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1614G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1797G>A
  hgvsp: ENST00000413025.1:c.1797G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.489G>A
  hgvsp: ENST00000375311.1:c.489G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1767G>A
  hgvsp: ENST00000331737.6:c.1767G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10457
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13661
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 6.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7937
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2137
  bin: 5.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6306
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 6.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 7295
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 8.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 9.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 9.75e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 4907
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 7.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 7.25e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala599Ala
num of homozygotes: 1
population: African
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

10-31137538-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137538
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137538
    reference: chr 10
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1796C>T
  hgvsp: ENSP00000412363.1:p.Ala599Val
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1766C>T
  hgvsp: ENSP00000410898.2:p.Ala589Val
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1613C>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1649C>T
  hgvsp: ENSP00000445461.1:p.Ala550Val
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1796C>T
  hgvsp: ENSP00000387546.1:p.Ala599Val
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1766C>T
  hgvsp: ENSP00000333571.6:p.Ala589Val
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1766C>T
  hgvsp: ENSP00000413060.1:p.Ala589Val
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1796C>T
  hgvsp: ENSP00000406934.2:p.Ala599Val
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.488C>T
  hgvsp: ENSP00000364460.1:p.Ala163Val
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1796C>T
  hgvsp: ENSP00000354663.3:p.Ala599Val
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7938
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10468
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3355
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4915
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6319
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13669
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2142
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7299
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala599Val
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ

10-31137538-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137538
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137538
    reference: chr 10
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1796C>G
  hgvsp: ENSP00000412363.1:p.Ala599Gly
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1766C>G
  hgvsp: ENSP00000413060.1:p.Ala589Gly
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1796C>G
  hgvsp: ENSP00000387546.1:p.Ala599Gly
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1613C>G
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.488C>G
  hgvsp: ENSP00000364460.1:p.Ala163Gly
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1796C>G
  hgvsp: ENSP00000354663.3:p.Ala599Gly
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1649C>G
  hgvsp: ENSP00000445461.1:p.Ala550Gly
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1766C>G
  hgvsp: ENSP00000333571.6:p.Ala589Gly
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1766C>G
  hgvsp: ENSP00000410898.2:p.Ala589Gly
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1796C>G
  hgvsp: ENSP00000406934.2:p.Ala599Gly
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7299
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10468
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13669
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6319
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3355
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4915
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7938
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5416
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ala599Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: African
reference allele: G
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

10-31137551-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137551
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137551
    reference: chr 10
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1783A>C
  hgvsp: ENSP00000412363.1:p.Ser595Arg
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1753A>C
  hgvsp: ENSP00000333571.6:p.Ser585Arg
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1753A>C
  hgvsp: ENSP00000413060.1:p.Ser585Arg
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1636A>C
  hgvsp: ENSP00000445461.1:p.Ser546Arg
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.475A>C
  hgvsp: ENSP00000364460.1:p.Ser159Arg
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1783A>C
  hgvsp: ENSP00000354663.3:p.Ser595Arg
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1783A>C
  hgvsp: ENSP00000406934.2:p.Ser595Arg
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1600A>C
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1783A>C
  hgvsp: ENSP00000387546.1:p.Ser595Arg
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1753A>C
  hgvsp: ENSP00000410898.2:p.Ser585Arg
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13670
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2140
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6323
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7299
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3356
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7943
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4914
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10469
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2511
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ser595Arg
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: African
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

10-31137567-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137567
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137567
    reference: chr 10
allele count: 457
allele frequency: 3.764105098426818e-3
allele num: 121410
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1767G>A
  hgvsp: ENST00000361310.3:c.1767G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1767G>A
  hgvsp: ENST00000442986.1:c.1767G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1737G>A
  hgvsp: ENST00000331737.6:c.1737G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1737G>A
  hgvsp: ENST00000444692.2:c.1737G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.459G>A
  hgvsp: ENST00000375311.1:c.459G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1737G>A
  hgvsp: ENST00000452305.1:c.1737G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1767G>A
  hgvsp: ENST00000413025.1:c.1767G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1767G>A
  hgvsp: ENST00000436087.2:c.1767G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1620G>A
  hgvsp: ENST00000538351.2:c.1620G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1584G>A
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4859
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3324
  bin: 5.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 8.25e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 6264
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7916
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 7.25e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 7237
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 9.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 10433
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 8.75e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 6.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 6.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 5.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.75e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 13631
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 9.75e1
  variant carriers: 198
genotype quality: GenotypeQuality
  all individuals: 5398
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Val589Val
num of homozygotes: 1
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: QD

10-31137573-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137573
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137573
    reference: chr 10
allele count: 2
allele frequency: 1.647283629295292e-5
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1731A>G
  hgvsp: ENST00000444692.2:c.1731A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1761A>G
  hgvsp: ENST00000442986.1:c.1761A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1761A>G
  hgvsp: ENST00000413025.1:c.1761A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1761A>G
  hgvsp: ENST00000361310.3:c.1761A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1731A>G
  hgvsp: ENST00000331737.6:c.1731A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1761A>G
  hgvsp: ENST00000436087.2:c.1761A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1578A>G
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1614A>G
  hgvsp: ENST00000538351.2:c.1614A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1731A>G
  hgvsp: ENST00000452305.1:c.1731A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.453A>G
  hgvsp: ENST00000375311.1:c.453A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7256
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10450
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7919
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4899
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6297
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3374
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13654
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2148
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5408
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Lys587Lys
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

10-31137580-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137580
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137580
    reference: chr 10
allele count: 4
allele frequency: 3.294567258590584e-5
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1724A>G
  hgvsp: ENSP00000333571.6:p.His575Arg
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1754A>G
  hgvsp: ENSP00000387546.1:p.His585Arg
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1724A>G
  hgvsp: ENSP00000413060.1:p.His575Arg
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1724A>G
  hgvsp: ENSP00000410898.2:p.His575Arg
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1754A>G
  hgvsp: ENSP00000412363.1:p.His585Arg
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1754A>G
  hgvsp: ENSP00000406934.2:p.His585Arg
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1571A>G
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.446A>G
  hgvsp: ENSP00000364460.1:p.His149Arg
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1754A>G
  hgvsp: ENSP00000354663.3:p.His585Arg
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1607A>G
  hgvsp: ENSP00000445461.1:p.His536Arg
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3374
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4899
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2148
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7256
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13656
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7916
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10450
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6297
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
hgvs: p.His585Arg
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum

10-31137586-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137586
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137586
    reference: chr 10
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1565T>C
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1718T>C
  hgvsp: ENSP00000410898.2:p.Phe573Ser
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1718T>C
  hgvsp: ENSP00000333571.6:p.Phe573Ser
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.440T>C
  hgvsp: ENSP00000364460.1:p.Phe147Ser
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1748T>C
  hgvsp: ENSP00000387546.1:p.Phe583Ser
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1601T>C
  hgvsp: ENSP00000445461.1:p.Phe534Ser
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1748T>C
  hgvsp: ENSP00000406934.2:p.Phe583Ser
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1718T>C
  hgvsp: ENSP00000413060.1:p.Phe573Ser
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1748T>C
  hgvsp: ENSP00000354663.3:p.Phe583Ser
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1748T>C
  hgvsp: ENSP00000412363.1:p.Phe583Ser
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10450
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4900
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7915
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6295
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7257
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13661
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3374
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Phe583Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum

10-31137595-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137595
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137595
    reference: chr 10
allele count: 6
allele frequency: 4.941850887885876e-5
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1709G>A
  hgvsp: ENSP00000333571.6:p.Arg570Gln
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1739G>A
  hgvsp: ENSP00000387546.1:p.Arg580Gln
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1739G>A
  hgvsp: ENSP00000354663.3:p.Arg580Gln
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1739G>A
  hgvsp: ENSP00000406934.2:p.Arg580Gln
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.431G>A
  hgvsp: ENSP00000364460.1:p.Arg144Gln
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1709G>A
  hgvsp: ENSP00000413060.1:p.Arg570Gln
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1556G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1592G>A
  hgvsp: ENSP00000445461.1:p.Arg531Gln
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1709G>A
  hgvsp: ENSP00000410898.2:p.Arg570Gln
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1739G>A
  hgvsp: ENSP00000412363.1:p.Arg580Gln
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10448
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7915
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3374
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4900
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7255
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6296
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2148
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13659
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24650
  bin: 9.75e1
  variant carriers: 6
hgvs: p.Arg580Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: African
population: European (Finnish)
population: East Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum

10-31137596-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137596
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137596
    reference: chr 10
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1738C>T
  hgvsp: ENSP00000406934.2:p.Arg580Ter
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1708C>T
  hgvsp: ENSP00000333571.6:p.Arg570Ter
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1555C>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.430C>T
  hgvsp: ENSP00000364460.1:p.Arg144Ter
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1738C>T
  hgvsp: ENSP00000412363.1:p.Arg580Ter
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1591C>T
  hgvsp: ENSP00000445461.1:p.Arg531Ter
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1738C>T
  hgvsp: ENSP00000354663.3:p.Arg580Ter
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1708C>T
  hgvsp: ENSP00000413060.1:p.Arg570Ter
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1708C>T
  hgvsp: ENSP00000410898.2:p.Arg570Ter
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1738C>T
  hgvsp: ENSP00000387546.1:p.Arg580Ter
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7915
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6296
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3373
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13662
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4902
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2148
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10447
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7255
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg580Ter
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQ

http://identifiers.org/exac.variant/10-31137604-CCAAA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137604
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137600
    reference: chr 10
allele count: 5
allele frequency: 4.11820907323823e-5
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1726_1729delTTTG
  hgvsp: ENSP00000387546.1:p.Phe576AlafsTer10
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1726_1729delTTTG
  hgvsp: ENSP00000412363.1:p.Phe576AlafsTer10
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1543_183+1546delTTTG
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1579_1582delTTTG
  hgvsp: ENSP00000445461.1:p.Phe527AlafsTer10
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1696_1699delTTTG
  hgvsp: ENSP00000413060.1:p.Phe566AlafsTer10
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1726_1729delTTTG
  hgvsp: ENSP00000354663.3:p.Phe576AlafsTer10
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1726_1729delTTTG
  hgvsp: ENSP00000406934.2:p.Phe576AlafsTer10
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1696_1699delTTTG
  hgvsp: ENSP00000333571.6:p.Phe566AlafsTer10
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.418_421delTTTG
  hgvsp: ENSP00000364460.1:p.Phe140AlafsTer10
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1696_1699delTTTG
  hgvsp: ENSP00000410898.2:p.Phe566AlafsTer10
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7913
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10447
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7254
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4901
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6296
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3373
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13663
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Phe576AlafsTer10
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: CCAAA
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/10-31137605-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137605
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137604
    reference: chr 10
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.420delT
  hgvsp: ENSP00000364460.1:p.Phe140LeufsTer11
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1698delT
  hgvsp: ENSP00000413060.1:p.Phe566LeufsTer11
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1728delT
  hgvsp: ENSP00000406934.2:p.Phe576LeufsTer11
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1581delT
  hgvsp: ENSP00000445461.1:p.Phe527LeufsTer11
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1545delT
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1728delT
  hgvsp: ENSP00000387546.1:p.Phe576LeufsTer11
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1728delT
  hgvsp: ENSP00000354663.3:p.Phe576LeufsTer11
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1698delT
  hgvsp: ENSP00000410898.2:p.Phe566LeufsTer11
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1698delT
  hgvsp: ENSP00000333571.6:p.Phe566LeufsTer11
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1728delT
  hgvsp: ENSP00000412363.1:p.Phe576LeufsTer11
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10447
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13664
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7254
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3373
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4901
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6296
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2148
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7912
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Phe576LeufsTer11
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: East Asian
reference allele: CA
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP

10-31137609-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137609
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137609
    reference: chr 10
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1695G>A
  hgvsp: ENST00000331737.6:c.1695G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1725G>A
  hgvsp: ENST00000442986.1:c.1725G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1695G>A
  hgvsp: ENST00000452305.1:c.1695G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1695G>A
  hgvsp: ENST00000444692.2:c.1695G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1725G>A
  hgvsp: ENST00000436087.2:c.1725G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1542G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1725G>A
  hgvsp: ENST00000361310.3:c.1725G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1725G>A
  hgvsp: ENST00000413025.1:c.1725G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1578G>A
  hgvsp: ENST00000538351.2:c.1578G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.417G>A
  hgvsp: ENST00000375311.1:c.417G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7912
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13665
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3373
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7254
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6297
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10445
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4901
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3016
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Val575Val
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD

10-31137611-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137611
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137611
    reference: chr 10
allele count: 47
allele frequency: 3.871116528843936e-4
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1693G>A
  hgvsp: ENSP00000413060.1:p.Val565Met
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.415G>A
  hgvsp: ENSP00000364460.1:p.Val139Met
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1723G>A
  hgvsp: ENSP00000354663.3:p.Val575Met
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1693G>A
  hgvsp: ENSP00000410898.2:p.Val565Met
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1576G>A
  hgvsp: ENSP00000445461.1:p.Val526Met
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1723G>A
  hgvsp: ENSP00000406934.2:p.Val575Met
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1693G>A
  hgvsp: ENSP00000333571.6:p.Val565Met
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1723G>A
  hgvsp: ENSP00000387546.1:p.Val575Met
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1723G>A
  hgvsp: ENSP00000412363.1:p.Val575Met
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1540G>A
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13658
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10438
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7247
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7909
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6290
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3372
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4896
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 9.75e1
  variant carriers: 37
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Val575Met
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

10-31137616-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137616
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137616
    reference: chr 10
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1688C>G
  hgvsp: ENSP00000410898.2:p.Ala563Gly
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1718C>G
  hgvsp: ENSP00000354663.3:p.Ala573Gly
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1535C>G
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1718C>G
  hgvsp: ENSP00000406934.2:p.Ala573Gly
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1718C>G
  hgvsp: ENSP00000412363.1:p.Ala573Gly
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1688C>G
  hgvsp: ENSP00000413060.1:p.Ala563Gly
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1688C>G
  hgvsp: ENSP00000333571.6:p.Ala563Gly
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.410C>G
  hgvsp: ENSP00000364460.1:p.Ala137Gly
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1718C>G
  hgvsp: ENSP00000387546.1:p.Ala573Gly
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1571C>G
  hgvsp: ENSP00000445461.1:p.Ala524Gly
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7252
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4898
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3378
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13668
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7911
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10443
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6291
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24644
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ala573Gly
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQ

http://identifiers.org/exac.variant/10-31137619-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137619
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137619
    reference: chr 10
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1685G>T
  hgvsp: ENSP00000333571.6:p.Cys562Phe
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1685G>T
  hgvsp: ENSP00000413060.1:p.Cys562Phe
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1568G>T
  hgvsp: ENSP00000445461.1:p.Cys523Phe
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1532G>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1715G>T
  hgvsp: ENSP00000387546.1:p.Cys572Phe
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1715G>T
  hgvsp: ENSP00000354663.3:p.Cys572Phe
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1685G>T
  hgvsp: ENSP00000410898.2:p.Cys562Phe
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1715G>T
  hgvsp: ENSP00000406934.2:p.Cys572Phe
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1715G>T
  hgvsp: ENSP00000412363.1:p.Cys572Phe
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.407G>T
  hgvsp: ENSP00000364460.1:p.Cys136Phe
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10443
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6292
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7252
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4898
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7912
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13666
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3378
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Cys572Phe
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD

10-31137621-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137621
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137621
    reference: chr 10
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1713T>C
  hgvsp: ENST00000442986.1:c.1713T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1566T>C
  hgvsp: ENST00000538351.2:c.1566T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1713T>C
  hgvsp: ENST00000436087.2:c.1713T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1683T>C
  hgvsp: ENST00000444692.2:c.1683T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1713T>C
  hgvsp: ENST00000361310.3:c.1713T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1683T>C
  hgvsp: ENST00000331737.6:c.1683T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1713T>C
  hgvsp: ENST00000413025.1:c.1713T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.405T>C
  hgvsp: ENST00000375311.1:c.405T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1683T>C
  hgvsp: ENST00000452305.1:c.1683T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1530T>C
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13666
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10443
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7913
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6291
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4898
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3378
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7253
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Phe571Phe
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

http://identifiers.org/exac.variant/10-31137624-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137624
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137624
    reference: chr 10
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1680G>T
  hgvsp: ENSP00000333571.6:p.Glu560Asp
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1710G>T
  hgvsp: ENSP00000387546.1:p.Glu570Asp
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1680G>T
  hgvsp: ENSP00000413060.1:p.Glu560Asp
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1563G>T
  hgvsp: ENSP00000445461.1:p.Glu521Asp
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1527G>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.402G>T
  hgvsp: ENSP00000364460.1:p.Glu134Asp
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1710G>T
  hgvsp: ENSP00000406934.2:p.Glu570Asp
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1680G>T
  hgvsp: ENSP00000410898.2:p.Glu560Asp
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1710G>T
  hgvsp: ENSP00000412363.1:p.Glu570Asp
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1710G>T
  hgvsp: ENSP00000354663.3:p.Glu570Asp
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7913
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4898
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13667
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10443
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7251
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6291
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3378
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Glu570Asp
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

10-31137627-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137627
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137627
    reference: chr 10
allele count: 3
allele frequency: 2.470925443942938e-5
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.399T>C
  hgvsp: ENST00000375311.1:c.399T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1560T>C
  hgvsp: ENST00000538351.2:c.1560T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1707T>C
  hgvsp: ENST00000413025.1:c.1707T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1524T>C
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1707T>C
  hgvsp: ENST00000436087.2:c.1707T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1677T>C
  hgvsp: ENST00000331737.6:c.1677T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1707T>C
  hgvsp: ENST00000442986.1:c.1707T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1677T>C
  hgvsp: ENST00000452305.1:c.1677T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1707T>C
  hgvsp: ENST00000361310.3:c.1707T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1677T>C
  hgvsp: ENST00000444692.2:c.1677T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7908
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13670
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3378
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7252
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10443
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4896
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6291
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3013
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Cys569Cys
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: DP

10-31137628-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137628
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137628
    reference: chr 10
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1523G>A
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1706G>A
  hgvsp: ENSP00000387546.1:p.Cys569Tyr
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1559G>A
  hgvsp: ENSP00000445461.1:p.Cys520Tyr
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1706G>A
  hgvsp: ENSP00000406934.2:p.Cys569Tyr
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1676G>A
  hgvsp: ENSP00000410898.2:p.Cys559Tyr
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1676G>A
  hgvsp: ENSP00000333571.6:p.Cys559Tyr
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1706G>A
  hgvsp: ENSP00000354663.3:p.Cys569Tyr
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1706G>A
  hgvsp: ENSP00000412363.1:p.Cys569Tyr
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.398G>A
  hgvsp: ENSP00000364460.1:p.Cys133Tyr
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1676G>A
  hgvsp: ENSP00000413060.1:p.Cys559Tyr
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13667
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7251
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10445
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7910
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2152
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4894
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3378
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6291
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Cys569Tyr
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD

http://identifiers.org/exac.variant/10-31137633-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137633
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137633
    reference: chr 10
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.393G>T
  hgvsp: ENSP00000364460.1:p.Met131Ile
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1701G>T
  hgvsp: ENSP00000406934.2:p.Met567Ile
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1671G>T
  hgvsp: ENSP00000333571.6:p.Met557Ile
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1701G>T
  hgvsp: ENSP00000387546.1:p.Met567Ile
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1554G>T
  hgvsp: ENSP00000445461.1:p.Met518Ile
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1701G>T
  hgvsp: ENSP00000354663.3:p.Met567Ile
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1671G>T
  hgvsp: ENSP00000413060.1:p.Met557Ile
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1518G>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1671G>T
  hgvsp: ENSP00000410898.2:p.Met557Ile
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1701G>T
  hgvsp: ENSP00000412363.1:p.Met567Ile
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3378
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7252
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4894
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13668
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7907
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6292
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10445
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3216
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Met567Ile
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: FS
site quality: ClippingRankSum

10-31137634-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137634
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137634
    reference: chr 10
allele count: 8
allele frequency: 6.589134517181169e-5
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1670T>C
  hgvsp: ENSP00000333571.6:p.Met557Thr
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1517T>C
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1700T>C
  hgvsp: ENSP00000387546.1:p.Met567Thr
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1700T>C
  hgvsp: ENSP00000412363.1:p.Met567Thr
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1670T>C
  hgvsp: ENSP00000410898.2:p.Met557Thr
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1700T>C
  hgvsp: ENSP00000354663.3:p.Met567Thr
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1670T>C
  hgvsp: ENSP00000413060.1:p.Met557Thr
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1700T>C
  hgvsp: ENSP00000406934.2:p.Met567Thr
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.392T>C
  hgvsp: ENSP00000364460.1:p.Met131Thr
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1553T>C
  hgvsp: ENSP00000445461.1:p.Met518Thr
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3378
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6289
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4894
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2152
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10442
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7251
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7906
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13667
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5403
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Met567Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP

10-31137635-TGA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137635
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137633
    reference: chr 10
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1697_1698delTC
  hgvsp: ENSP00000354663.3:p.Leu566HisfsTer4
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1667_1668delTC
  hgvsp: ENSP00000333571.6:p.Leu556HisfsTer4
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1514_183+1515delTC
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.389_390delTC
  hgvsp: ENSP00000364460.1:p.Leu130HisfsTer4
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1550_1551delTC
  hgvsp: ENSP00000445461.1:p.Leu517HisfsTer4
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1667_1668delTC
  hgvsp: ENSP00000410898.2:p.Leu556HisfsTer4
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1697_1698delTC
  hgvsp: ENSP00000406934.2:p.Leu566HisfsTer4
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1667_1668delTC
  hgvsp: ENSP00000413060.1:p.Leu556HisfsTer4
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1697_1698delTC
  hgvsp: ENSP00000387546.1:p.Leu566HisfsTer4
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1697_1698delTC
  hgvsp: ENSP00000412363.1:p.Leu566HisfsTer4
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13667
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7903
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7253
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3378
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4897
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10443
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6290
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu566HisfsTer4
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: TGA
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

10-31137638-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137638
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137638
    reference: chr 10
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsc: ENST00000442986.1:c.1696C>T
  hgvsp: ENSP00000412363.1:p.Leu566Phe
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  hgvsc: ENST00000609683.1:c.183+1513C>T
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsc: ENST00000444692.2:c.1666C>T
  hgvsp: ENSP00000410898.2:p.Leu556Phe
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsc: ENST00000413025.1:c.1696C>T
  hgvsp: ENSP00000387546.1:p.Leu566Phe
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsc: ENST00000538351.2:c.1549C>T
  hgvsp: ENSP00000445461.1:p.Leu517Phe
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsc: ENST00000375311.1:c.388C>T
  hgvsp: ENSP00000364460.1:p.Leu130Phe
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsc: ENST00000361310.3:c.1696C>T
  hgvsp: ENSP00000354663.3:p.Leu566Phe
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsc: ENST00000331737.6:c.1666C>T
  hgvsp: ENSP00000333571.6:p.Leu556Phe
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsc: ENST00000452305.1:c.1666C>T
  hgvsp: ENSP00000413060.1:p.Leu556Phe
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsc: ENST00000436087.2:c.1696C>T
  hgvsp: ENSP00000406934.2:p.Leu566Phe
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7250
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13670
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10443
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7902
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6290
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3378
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4897
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2151
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu566Phe
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

10-31137639-TTTCTTCAGACGG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31137639
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 31137627
    reference: chr 10
allele count: 7
allele frequency: 5.765492702533522e-5
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000354663
  ensembl transcript: ENST00000361310
  gene symbol: ZNF438
  hgvsp: ENSP00000354663.3:p.Asn561_Lys564del
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000387546
  ensembl transcript: ENST00000413025
  gene symbol: ZNF438
  hgvsp: ENSP00000387546.1:p.Asn561_Lys564del
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000333571
  ensembl transcript: ENST00000331737
  gene symbol: ZNF438
  hgvsp: ENSP00000333571.6:p.Asn551_Lys554del
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000410898
  ensembl transcript: ENST00000444692
  gene symbol: ZNF438
  hgvsp: ENSP00000410898.2:p.Asn551_Lys554del
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000445461
  ensembl transcript: ENST00000538351
  gene symbol: ZNF438
  hgvsp: ENSP00000445461.1:p.Asn512_Lys515del
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000412363
  ensembl transcript: ENST00000442986
  gene symbol: ZNF438
  hgvsp: ENSP00000412363.1:p.Asn561_Lys564del
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000413060
  ensembl transcript: ENST00000452305
  gene symbol: ZNF438
  hgvsp: ENSP00000413060.1:p.Asn551_Lys554del
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000406934
  ensembl transcript: ENST00000436087
  gene symbol: ZNF438
  hgvsp: ENSP00000406934.2:p.Asn561_Lys564del
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000364460
  ensembl transcript: ENST00000375311
  gene symbol: ZNF438
  hgvsp: ENSP00000364460.1:p.Asn125_Lys128del
  variant of: http://identifiers.org/hgnc/21029
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183621
  ensembl protein: ENSP00000476810
  ensembl transcript: ENST00000609683
  gene symbol: ZNF438
  variant of: http://identifiers.org/hgnc/21029
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7902
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7248
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4895
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13669
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3378
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 10442
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6290
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Asn561_Lys564del
num of homozygotes: 0
reference allele: TTTCTTCAGACGG

GenotypeQuality
all individuals: 28
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25301
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 792
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3162
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2424
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3689
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4630
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1654
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8987
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 26
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7900
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1550
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9416
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16202
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.662874195654201e-5
allele num: 64338
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.357e1

MQRankSum
type: SiteQuality
SIO_000300: -3.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.2e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e-2

FS
type: SiteQuality
SIO_000300: 6.404e0

MQ
type: SiteQuality
SIO_000300: 5.981e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.384e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

DP
type: SiteQuality
SIO_000300: 1.965199e6

VQSLOD
type: SiteQuality
SIO_000300: 6.48e-1

GenotypeQuality
all individuals: 52
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1654
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 873
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25067
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1650
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7891
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3155
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2424
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4628
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3687
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16104
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 14
allele frequency: 2.179734695148533e-4
allele num: 64228
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.68e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.8e0

DP
type: SiteQuality
SIO_000300: 1.961417e6

FS
type: SiteQuality
SIO_000300: 6.675e0

MQRankSum
type: SiteQuality
SIO_000300: 4.59e-1

MQ
type: SiteQuality
SIO_000300: 5.996e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.01e-1

QD
type: SiteQuality
SIO_000300: 1.266e1

GenotypeQuality
all individuals: 41
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1695
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4622
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3149
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8975
bin: 9.75e1
variant carriers: 12

GenotypeQuality
all individuals: 132
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3684
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2424
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 911
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7870
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24945
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1654
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
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East Asian
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African
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Other
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Latino
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European (Non-Finnish)
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South Asian
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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MQRankSum
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MQ
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DP
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FS
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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Other
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Latino
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European (Non-Finnish)
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European (Finnish)
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East Asian
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DP
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InbreedingCoeff
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QD
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MQ
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ClippingRankSum
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FS
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Latino
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East Asian
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South Asian
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Other
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European (Finnish)
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African
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ReadPosRankSum
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BaseQRankSum
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FS
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QD
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VQSLOD
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InbreedingCoeff
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MQ
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DP
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ClippingRankSum
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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African
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European (Non-Finnish)
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South Asian
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East Asian
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Other
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VQSLOD
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FS
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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MQ
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DP
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ReadPosRankSum
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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South Asian
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East Asian
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Latino
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European (Non-Finnish)
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European (Finnish)
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BaseQRankSum
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VQSLOD
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QD
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FS
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MQ
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ClippingRankSum
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DP
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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East Asian
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Latino
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European (Non-Finnish)
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South Asian
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Other
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FS
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BaseQRankSum
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QD
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ClippingRankSum
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DP
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MQRankSum
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MQ
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Other
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Latino
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European (Finnish)
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South Asian
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African
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BaseQRankSum
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DP
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QD
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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MQ
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InbreedingCoeff
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FS
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Finnish)
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African
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European (Non-Finnish)
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South Asian
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Other
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ReadPosRankSum
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BaseQRankSum
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DP
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FS
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MQ
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VQSLOD
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QD
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 61722
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11386
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12310
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.15473441108545e-4
allele num: 8660
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
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MQRankSum
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ReadPosRankSum
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DP
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VQSLOD
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InbreedingCoeff
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SIO_000300: -5.999999999999999e-4

FS
type: SiteQuality
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 61426
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
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East Asian
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allele frequency: 1.186802753382388e-4
allele num: 8426
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VQSLOD
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MQ
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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FS
type: SiteQuality
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ReadPosRankSum
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 802
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.627498209751969e-5
allele num: 61444
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.037e0

QD
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ClippingRankSum
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DP
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FS
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MQ
type: SiteQuality
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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SIO_000300: 1.71e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 61026
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8398
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 792
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 9.216589861751152e-5
allele num: 10850
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MQRankSum
type: SiteQuality
SIO_000300: -9.8e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.5e-1

BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 4.806e0

DP
type: SiteQuality
SIO_000300: 1.796529e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.3e-2

QD
type: SiteQuality
SIO_000300: 1.512e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.58e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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num of homozygotes: 0

East Asian
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allele frequency: 1.194743130227001e-4
allele num: 8370
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
SIO_000300: -9.14e-1

DP
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BaseQRankSum
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FS
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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MQ
type: SiteQuality
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ReadPosRankSum
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QD
type: SiteQuality
SIO_000300: 1.075e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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Other
type: Population
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African
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South Asian
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European (Non-Finnish)
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East Asian
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DP
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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MQRankSum
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FS
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BaseQRankSum
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MQ
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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African
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South Asian
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Latino
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Other
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East Asian
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ReadPosRankSum
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InbreedingCoeff
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FS
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ClippingRankSum
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VQSLOD
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MQ
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QD
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BaseQRankSum
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MQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

South Asian
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allele num: 9872
num of homozygotes: 0

European (Finnish)
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Other
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European (Non-Finnish)
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allele num: 60410
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African
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East Asian
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Latino
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BaseQRankSum
type: SiteQuality
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MQRankSum
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MQ
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QD
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VQSLOD
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FS
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 8.347245409015025e-5
allele num: 11980
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10022
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European (Non-Finnish)
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allele frequency: 0.0e0
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QD
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DP
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MQRankSum
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FS
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InbreedingCoeff
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MQ
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BaseQRankSum
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ClippingRankSum
type: SiteQuality
SIO_000300: -8.39e-1

VQSLOD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.602497622042896e-5
allele num: 65182
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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FS
type: SiteQuality
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QD
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ReadPosRankSum
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BaseQRankSum
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DP
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ClippingRankSum
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MQRankSum
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VQSLOD
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MQ
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 1.533177971298908e-5
allele num: 65224
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
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African
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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MQ
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
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DP
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MQRankSum
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QD
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 8.298755186721991e-5
allele num: 12050
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10042
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65200
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.201176e6

MQ
type: SiteQuality
SIO_000300: 5.909e1

FS
type: SiteQuality
SIO_000300: 8.817e0

VQSLOD
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
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QD
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MQRankSum
type: SiteQuality
SIO_000300: 8.7e-1

ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 5.580000000000001e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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South Asian
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allele count: 0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.531393568147014e-5
allele num: 65300
num of homozygotes: 0

MQ
type: SiteQuality
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VQSLOD
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QD
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SIO_000300: 1.275e1

MQRankSum
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DP
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ClippingRankSum
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BaseQRankSum
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FS
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ReadPosRankSum
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InbreedingCoeff
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SIO_000300: 1.7e-3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Other
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
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allele num: 65388
num of homozygotes: 0

South Asian
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MQRankSum
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ClippingRankSum
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MQ
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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FS
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DP
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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African
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South Asian
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.524622655892666e-5
allele num: 65590
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ReadPosRankSum
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FS
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InbreedingCoeff
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MQ
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MQRankSum
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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African
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num of homozygotes: 0

Latino
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Other
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South Asian
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VQSLOD
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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FS
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DP
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ClippingRankSum
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BaseQRankSum
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4879
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variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13750
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.520820026158104e-5
allele num: 65754
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -6.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.27e0

QD
type: SiteQuality
SIO_000300: 1.556e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.11e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.96e-1

DP
type: SiteQuality
SIO_000300: 2.237427e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e-2

MQ
type: SiteQuality
SIO_000300: 5.959e1

GenotypeQuality
all individuals: 80
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4881
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variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 14896
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.520958812435359e-5
allele num: 65748
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13814
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.239142e6

QD
type: SiteQuality
SIO_000300: 1.101e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.732e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.95e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

MQRankSum
type: SiteQuality
SIO_000300: 2.4e-2

FS
type: SiteQuality
SIO_000300: 9.747e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

VQSLOD
type: SiteQuality
SIO_000300: -3.93e-1

GenotypeQuality
all individuals: 2653
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 24616
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517634917744187e-5
allele num: 65892
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14192
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.972e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.23e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.129999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.117e1

MQRankSum
type: SiteQuality
SIO_000300: -1.002e0

DP
type: SiteQuality
SIO_000300: 2.244915e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

FS
type: SiteQuality
SIO_000300: 3.686e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.53e-1

GenotypeDepth
all individuals: 307
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 46
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variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2652
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variant carriers: 0

GenotypeQuality
all individuals: 23
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variant carriers: 0

GenotypeQuality
all individuals: 1468
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variant carriers: 0

GenotypeQuality
all individuals: 238
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 327
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variant carriers: 0

GenotypeQuality
all individuals: 36
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 65
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variant carriers: 0

GenotypeQuality
all individuals: 2306
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.731601731601732e-4
allele num: 11550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66000
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14534
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.51e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

MQ
type: SiteQuality
SIO_000300: 5.937e1

FS
type: SiteQuality
SIO_000300: 6.840000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.636e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.5e-1

QD
type: SiteQuality
SIO_000300: 9.15e0

DP
type: SiteQuality
SIO_000300: 2.250392e6

VQSLOD
type: SiteQuality
SIO_000300: 2.33e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.93e-1

GenotypeQuality
all individuals: 3068
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
all individuals: 178
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variant carriers: 0

GenotypeQuality
all individuals: 2360
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 81
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variant carriers: 0

GenotypeQuality
all individuals: 89
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variant carriers: 0

GenotypeQuality
all individuals: 92
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2902
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.889616644191871e-4
allele num: 10382
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15198
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66206
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.11e0

QD
type: SiteQuality
SIO_000300: 1.468e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.8e-3

FS
type: SiteQuality
SIO_000300: 4.36e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.2e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -4.6e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.23e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.01e0

DP
type: SiteQuality
SIO_000300: 2.261266e6

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 227

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 77
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variant carriers: 0

GenotypeQuality
all individuals: 2641
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.121076233183856e-3
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 224
allele frequency: 2.589595375722543e-2
allele num: 8650
num of homozygotes: 6

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.588996763754045e-4
allele num: 15450
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.034274680183442e-5
allele num: 66288
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.8e0

QD
type: SiteQuality
SIO_000300: 1.39e1

DP
type: SiteQuality
SIO_000300: 2.27576e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.02e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.3e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.7e-2

FS
type: SiteQuality
SIO_000300: 5.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.91e0

MQ
type: SiteQuality
SIO_000300: 5.958e1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 189
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GenotypeQuality
all individuals: 712
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GenotypeQuality
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GenotypeQuality
all individuals: 135
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GenotypeQuality
all individuals: 77
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507477086348288e-5
allele num: 66336
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.687e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.277e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.800000000000001e-3

DP
type: SiteQuality
SIO_000300: 2.274797e6

MQRankSum
type: SiteQuality
SIO_000300: -5.32e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.0e-2

FS
type: SiteQuality
SIO_000300: 1.072e0

VQSLOD
type: SiteQuality
SIO_000300: 1.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.08e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1810
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.05345533349386e-4
allele num: 66448
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15890
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.907e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.3e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.46e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.64e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 7.18e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.44e-1

DP
type: SiteQuality
SIO_000300: 2.28058e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

QD
type: SiteQuality
SIO_000300: 1.303e1

GenotypeQuality
all individuals: 24760
bin: 9.75e1
variant carriers: 290

GenotypeQuality
all individuals: 84
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2646
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variant carriers: 0

GenotypeQuality
all individuals: 2919
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 193
allele frequency: 2.903740258177113e-3
allele num: 66466
num of homozygotes: 1

Other
type: Population
allele count: 12
allele frequency: 1.327433628318584e-2
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 41
allele frequency: 6.200846944948578e-3
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.885725278953444e-4
allele num: 10396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 44
allele frequency: 3.803596127247579e-3
allele num: 11568
num of homozygotes: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15968
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.17e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.64e-1

QD
type: SiteQuality
SIO_000300: 1.215e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.04e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.557e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.45e-1

DP
type: SiteQuality
SIO_000300: 2.295207e6

VQSLOD
type: SiteQuality
SIO_000300: 6.03e0

MQ
type: SiteQuality
SIO_000300: 5.965e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
all individuals: 2986
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16354
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.169e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.98e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.585e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.29e0

MQ
type: SiteQuality
SIO_000300: 5.993e1

VQSLOD
type: SiteQuality
SIO_000300: -5.92e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.561e0

DP
type: SiteQuality
SIO_000300: 2.291282e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2476
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16392
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.191e0

QD
type: SiteQuality
SIO_000300: 1.077e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.713e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.38e-1

MQ
type: SiteQuality
SIO_000300: 5.904e1

VQSLOD
type: SiteQuality
SIO_000300: 2.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -9.350000000000001e-1

DP
type: SiteQuality
SIO_000300: 2.292244e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.57e0

GenotypeQuality
all individuals: 25
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
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variant carriers: 0

GenotypeQuality
all individuals: 2999
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 22
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GenotypeQuality
all individuals: 24604
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variant carriers: 6

GenotypeQuality
all individuals: 26
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variant carriers: 0

GenotypeQuality
all individuals: 29
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variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
all individuals: 2487
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variant carriers: 0

GenotypeQuality
all individuals: 3212
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variant carriers: 0

GenotypeQuality
all individuals: 2
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GenotypeQuality
all individuals: 17246
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variant carriers: 0

GenotypeQuality
all individuals: 25
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variant carriers: 0

GenotypeQuality
all individuals: 5352
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1835
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.003061040753856e-5
allele num: 66644
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16398
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.148e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.11e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -6.292e-1

QD
type: SiteQuality
SIO_000300: 2.71e0

MQ
type: SiteQuality
SIO_000300: 5.222e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.52e0

FS
type: SiteQuality
SIO_000300: 5.859e0

DP
type: SiteQuality
SIO_000300: 2.292288e6

GenotypeQuality
all individuals: 2670
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 104
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 32
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
all individuals: 3213
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.002400960384154e-5
allele num: 66640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16416
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.292671e6

MQRankSum
type: SiteQuality
SIO_000300: -1.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.83e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.359e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.820000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.38e0

MQ
type: SiteQuality
SIO_000300: 5.979e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 66

GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 63
allele frequency: 7.279870580078576e-3
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.087909411907951e-5
allele num: 16426
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500420117632937e-5
allele num: 66648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.43e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.45e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

FS
type: SiteQuality
SIO_000300: 5.23e-1

DP
type: SiteQuality
SIO_000300: 2.296206e6

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.969e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
all individuals: 5400
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66698
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.311604253351826e-4
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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VQSLOD
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DP
type: SiteQuality
SIO_000300: 2.295587e6

MQRankSum
type: SiteQuality
SIO_000300: -1.41e-1

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.925e1

FS
type: SiteQuality
SIO_000300: 5.36e-1

ClippingRankSum
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SIO_000300: -6.04e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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African
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Latino
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Other
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European (Non-Finnish)
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MQRankSum
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InbreedingCoeff
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FS
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ReadPosRankSum
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ClippingRankSum
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MQ
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QD
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DP
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VQSLOD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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African
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South Asian
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Other
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Latino
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European (Non-Finnish)
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DP
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BaseQRankSum
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VQSLOD
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MQRankSum
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ReadPosRankSum
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FS
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InbreedingCoeff
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ClippingRankSum
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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European (Non-Finnish)
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African
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European (Finnish)
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East Asian
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Latino
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MQRankSum
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ReadPosRankSum
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QD
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FS
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele num: 10404
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Other
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East Asian
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allele frequency: 1.699421965317919e-2
allele num: 8650
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European (Non-Finnish)
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allele frequency: 2.547808884359451e-4
allele num: 66724
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Latino
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allele frequency: 8.637070305752289e-5
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num of homozygotes: 0

South Asian
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ClippingRankSum
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MQ
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DP
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FS
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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VQSLOD
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QD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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Latino
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South Asian
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European (Finnish)
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European (Non-Finnish)
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African
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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DP
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VQSLOD
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QD
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FS
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MQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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South Asian
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East Asian
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num of homozygotes: 0

European (Finnish)
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num of homozygotes: 0

Other
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Latino
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African
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QD
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MQ
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MQRankSum
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FS
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ClippingRankSum
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DP
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Non-Finnish)
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East Asian
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South Asian
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Latino
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European (Finnish)
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African
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FS
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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QD
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BaseQRankSum
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InbreedingCoeff
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DP
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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East Asian
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European (Finnish)
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Latino
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Other
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South Asian
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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SIO_000300: 3.07e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.54e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

MQ
type: SiteQuality
SIO_000300: 5.975e1

DP
type: SiteQuality
SIO_000300: 2.320792e6

QD
type: SiteQuality
SIO_000300: 1.321e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
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allele frequency: 1.921968095329617e-4
allele num: 10406
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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MQRankSum
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InbreedingCoeff
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MQ
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DP
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BaseQRankSum
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SIO_000300: -1.165e0

FS
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QD
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
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allele count: 4
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allele num: 16512
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Other
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MQ
type: SiteQuality
SIO_000300: 5.964e1

VQSLOD
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SIO_000300: 7.63e-1

FS
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SIO_000300: 4.093e0

DP
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InbreedingCoeff
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SIO_000300: -2.0e-4

QD
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 8.149999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.62e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.0e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele num: 11578
num of homozygotes: 0

African
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Other
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DP
type: SiteQuality
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VQSLOD
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QD
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MQRankSum
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ReadPosRankSum
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FS
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InbreedingCoeff
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SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
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BaseQRankSum
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SIO_000300: 7.28e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 2.996703626011388e-5
allele num: 66740
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

South Asian
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allele num: 16512
num of homozygotes: 0

Other
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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FS
type: SiteQuality
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MQ
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InbreedingCoeff
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MQRankSum
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QD
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ClippingRankSum
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DP
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66740
num of homozygotes: 0

European (Finnish)
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MQRankSum
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QD
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VQSLOD
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ClippingRankSum
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DP
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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FS
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

African
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Other
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South Asian
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European (Non-Finnish)
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allele frequency: 4.495055439017081e-5
allele num: 66740
num of homozygotes: 0

East Asian
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Latino
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allele frequency: 8.637070305752289e-5
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BaseQRankSum
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VQSLOD
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MQ
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QD
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InbreedingCoeff
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ClippingRankSum
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FS
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MQRankSum
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

African
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Latino
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Other
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South Asian
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East Asian
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InbreedingCoeff
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ClippingRankSum
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QD
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FS
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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MQRankSum
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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European (Non-Finnish)
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allele num: 66734
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Latino
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South Asian
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European (Finnish)
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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FS
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MQRankSum
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MQ
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Finnish)
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South Asian
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East Asian
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African
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European (Non-Finnish)
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allele frequency: 7.491759065028469e-5
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MQ
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VQSLOD
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BaseQRankSum
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FS
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ReadPosRankSum
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MQRankSum
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QD
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ClippingRankSum
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InbreedingCoeff
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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Other
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Latino
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African
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South Asian
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East Asian
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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FS
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InbreedingCoeff
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MQRankSum
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DP
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ClippingRankSum
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QD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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European (Non-Finnish)
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Other
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East Asian
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Latino
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South Asian
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MQRankSum
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BaseQRankSum
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QD
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FS
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ClippingRankSum
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DP
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MQ
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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Other
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European (Finnish)
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European (Non-Finnish)
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South Asian
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MQRankSum
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QD
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FS
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ReadPosRankSum
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ClippingRankSum
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InbreedingCoeff
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MQ
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VQSLOD
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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Latino
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East Asian
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European (Finnish)
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Other
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South Asian
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QD
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DP
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MQRankSum
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FS
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InbreedingCoeff
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VQSLOD
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MQ
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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Other
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European (Non-Finnish)
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African
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South Asian
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East Asian
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European (Finnish)
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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MQ
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FS
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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Other
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South Asian
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Latino
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European (Finnish)
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European (Non-Finnish)
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DP
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MQRankSum
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VQSLOD
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MQ
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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FS
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QD
type: SiteQuality
SIO_000300: 1.512e1

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5404
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2485
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2661
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24644
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 17439
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1836
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3014
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.94e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e0

VQSLOD
type: SiteQuality
SIO_000300: -1.089e0

MQRankSum
type: SiteQuality
SIO_000300: 3.2e-2

MQ
type: SiteQuality
SIO_000300: 5.873e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.595e1

DP
type: SiteQuality
SIO_000300: 2.305804e6

FS
type: SiteQuality
SIO_000300: 7.16e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.498e0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2660
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3013
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24647
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 4.844961240310077e-4
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.27e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 5.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.2e-2

QD
type: SiteQuality
SIO_000300: 1.374e1

MQRankSum
type: SiteQuality
SIO_000300: -1.58e-1

MQ
type: SiteQuality
SIO_000300: 5.978e1

FS
type: SiteQuality
SIO_000300: 1.94e0

DP
type: SiteQuality
SIO_000300: 2.306517e6

GenotypeQuality
all individuals: 0
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3215
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5404
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24645
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.306108e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.38e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.49e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.97e-1

MQ
type: SiteQuality
SIO_000300: 5.997e1

VQSLOD
type: SiteQuality
SIO_000300: 4.48e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.21e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.928e1

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2485
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1837
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24644
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3013
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.977e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.34e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.593e0

DP
type: SiteQuality
SIO_000300: 2.306238e6

VQSLOD
type: SiteQuality
SIO_000300: 1.17e0

FS
type: SiteQuality
SIO_000300: 2.585e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.36e-1

QD
type: SiteQuality
SIO_000300: 1.19e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.66e-1