7-73010576-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010576
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010576
    reference: chr 7
allele count: 1
allele frequency: 8.309650828472188e-6
allele num: 120342
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1959C>T
  hgvsp: ENST00000414749.2:c.1959C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1965C>T
  hgvsp: ENST00000429400.2:c.1965C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1686C>T
  hgvsp: ENST00000395189.1:c.1686C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1683C>T
  hgvsp: ENST00000434326.1:c.1683C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*86C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1965C>T
  hgvsp: ENST00000313375.3:c.1965C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.702C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1959C>T
  hgvsp: ENST00000354613.1:c.1959C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5970
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2073
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28562
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19045
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1850
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1906
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ile655Ile
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

7-73010587-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010587
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010587
    reference: chr 7
allele count: 1
allele frequency: 8.311722853913159e-6
allele num: 120312
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1954A>G
  hgvsp: ENSP00000320886.3:p.Ile652Val
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1948A>G
  hgvsp: ENSP00000346629.1:p.Ile650Val
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1675A>G
  hgvsp: ENSP00000378616.1:p.Ile559Val
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1672A>G
  hgvsp: ENSP00000392636.1:p.Ile558Val
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1954A>G
  hgvsp: ENSP00000406296.2:p.Ile652Val
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1948A>G
  hgvsp: ENSP00000412330.2:p.Ile650Val
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*75A>G
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.691A>G
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2073
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19051
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28463
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5973
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1259
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ile652Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: African
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS

7-73010589-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010589
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010589
    reference: chr 7
allele count: 2
allele frequency: 1.662703889064397e-5
allele num: 120286
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1946G>A
  hgvsp: ENSP00000346629.1:p.Arg649His
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1952G>A
  hgvsp: ENSP00000406296.2:p.Arg651His
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1673G>A
  hgvsp: ENSP00000378616.1:p.Arg558His
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1952G>A
  hgvsp: ENSP00000320886.3:p.Arg651His
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1946G>A
  hgvsp: ENSP00000412330.2:p.Arg649His
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*73G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1670G>A
  hgvsp: ENSP00000392636.1:p.Arg557His
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.689G>A
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2074
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28415
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19046
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5972
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1907
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1845
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg651His
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ

7-73010590-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010590
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010590
    reference: chr 7
allele count: 2
allele frequency: 1.662786830728301e-5
allele num: 120280
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1669C>T
  hgvsp: ENSP00000392636.1:p.Arg557Cys
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1945C>T
  hgvsp: ENSP00000412330.2:p.Arg649Cys
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1945C>T
  hgvsp: ENSP00000346629.1:p.Arg649Cys
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*72C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1951C>T
  hgvsp: ENSP00000406296.2:p.Arg651Cys
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1951C>T
  hgvsp: ENSP00000320886.3:p.Arg651Cys
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1672C>T
  hgvsp: ENSP00000378616.1:p.Arg558Cys
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.688C>T
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2073
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19046
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28413
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1383
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5975
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 640
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6462
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg651Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

7-73010592-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010592
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010592
    reference: chr 7
allele count: 3
allele frequency: 2.49409730304945e-5
allele num: 120284
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1943G>A
  hgvsp: ENSP00000346629.1:p.Arg648Gln
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1667G>A
  hgvsp: ENSP00000392636.1:p.Arg556Gln
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1949G>A
  hgvsp: ENSP00000406296.2:p.Arg650Gln
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1943G>A
  hgvsp: ENSP00000412330.2:p.Arg648Gln
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.686G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1949G>A
  hgvsp: ENSP00000320886.3:p.Arg650Gln
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1670G>A
  hgvsp: ENSP00000378616.1:p.Arg557Gln
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*70G>A
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19045
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28406
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2073
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5973
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1259
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 644
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg650Gln
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: C
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

7-73010593-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010593
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010593
    reference: chr 7
allele count: 3
allele frequency: 2.494055833596595e-5
allele num: 120286
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1669C>T
  hgvsp: ENSP00000378616.1:p.Arg557Trp
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*69C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1666C>T
  hgvsp: ENSP00000392636.1:p.Arg556Trp
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1948C>T
  hgvsp: ENSP00000406296.2:p.Arg650Trp
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1948C>T
  hgvsp: ENSP00000320886.3:p.Arg650Trp
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1942C>T
  hgvsp: ENSP00000346629.1:p.Arg648Trp
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.685C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1942C>T
  hgvsp: ENSP00000412330.2:p.Arg648Trp
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19053
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5974
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28407
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2073
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6456
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 782
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1843
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg650Trp
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

7-73010599-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010599
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010599
    reference: chr 7
allele count: 26
allele frequency: 2.162377950398377e-4
allele num: 120238
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1663G>A
  hgvsp: ENSP00000378616.1:p.Glu555Lys
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.679G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1942G>A
  hgvsp: ENSP00000406296.2:p.Glu648Lys
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1660G>A
  hgvsp: ENSP00000392636.1:p.Glu554Lys
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1939-3G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1942G>A
  hgvsp: ENSP00000320886.3:p.Glu648Lys
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*63G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1939-3G>A
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2070
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19029
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28359
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5971
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 782
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4434
  bin: 9.75e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Glu648Lys
num of homozygotes: 1
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: QD

7-73010600-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010600
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010600
    reference: chr 7
allele count: 3
allele frequency: 2.495092983798529e-5
allele num: 120236
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1941C>T
  hgvsp: ENST00000429400.2:c.1941C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1659C>T
  hgvsp: ENST00000434326.1:c.1659C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1941C>T
  hgvsp: ENST00000313375.3:c.1941C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1939-4C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*62C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1662C>T
  hgvsp: ENST00000395189.1:c.1662C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.678C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1939-4C>T
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28355
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2073
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5969
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19024
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1900
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 646
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
hgvs: c.1941C>T
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD

7-73010601-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010601
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010601
    reference: chr 7
allele count: 1
allele frequency: 8.315870006320061e-6
allele num: 120252
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1939-5C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1940C>T
  hgvsp: ENSP00000406296.2:p.Thr647Ile
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1939-5C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1940C>T
  hgvsp: ENSP00000320886.3:p.Thr647Ile
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1658C>T
  hgvsp: ENSP00000392636.1:p.Thr553Ile
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*61C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1661C>T
  hgvsp: ENSP00000378616.1:p.Thr554Ile
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.677C>T
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19019
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28341
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5973
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Thr647Ile
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD

7-73010605-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010605
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010605
    reference: chr 7
allele count: 20
allele frequency: 1.663589026966778e-4
allele num: 120222
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1939-3G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1939-9G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.676-3G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*60-3G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1657-3G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1939-3G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1660-3G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1939-9G>A
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5965
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19003
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2072
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28319
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1384
  bin: 4.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1896
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 664
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 782
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
hgvs: c.1939-3G>A
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

7-73010619-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010619
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010619
    reference: chr 7
allele count: 1
allele frequency: 8.323206765102459e-6
allele num: 120146
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1939-17A>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1939-23A>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1939-23A>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1657-17A>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1660-17A>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.676-17A>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*60-17A>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1939-17A>T
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28197
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2070
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5971
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19013
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1836
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1896
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 781
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: MQ

7-73010619-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010619
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010619
    reference: chr 7
allele count: 3
allele frequency: 2.496962029530737e-5
allele num: 120146
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*60-17A>G
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1939-17A>G
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.676-17A>G
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1660-17A>G
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1939-23A>G
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1939-17A>G
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1939-23A>G
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1657-17A>G
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19013
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28197
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5971
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2070
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 758
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 642
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1836
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6436
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff

7-73010623-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010623
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010623
    reference: chr 7
allele count: 1
allele frequency: 8.325008325008325e-6
allele num: 120120
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1939-27C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*60-21C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.676-21C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1939-21C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1939-27C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1657-21C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1660-21C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1939-21C>T
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18989
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5966
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28138
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4433
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 781
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6428
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1834
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 790
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

7-73010627-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010627
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010627
    reference: chr 7
allele count: 1
allele frequency: 8.326671995736744e-6
allele num: 120096
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1657-25C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1939-25C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1939-25C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1660-25C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*60-25C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1939-31C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1939-31C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.676-25C>T
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28090
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5971
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18973
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41775
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 792
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6424
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP

7-73010628-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010628
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010628
    reference: chr 7
allele count: 1
allele frequency: 8.325978718798394e-6
allele num: 120106
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1939-26G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*60-26G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1939-26G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1939-32G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1660-26G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.676-26G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1657-26G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1939-32G>A
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18979
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28085
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5970
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41793
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD

7-73010637-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010637
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010637
    reference: chr 7
allele count: 2
allele frequency: 1.665778251599147e-5
allele num: 120064
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1660-35C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*60-35C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1939-35C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1657-35C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.676-35C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1939-41C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1939-35C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1939-41C>T
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18940
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27951
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1384
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5971
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41602
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6413
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1250
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 852
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: ReadPosRankSum

7-73010639-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010639
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010639
    reference: chr 7
allele count: 1
allele frequency: 8.334166750008334e-6
allele num: 119988
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1657-37C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1660-37C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1939-37C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*60-37C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1939-43C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1939-37C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1939-43C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.676-37C>T
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5999
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18898
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2076
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27885
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1250
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1887
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6401
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 643
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum

7-73010642-CAGG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010642
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010639
    reference: chr 7
allele count: 3
allele frequency: 2.499958334027766e-5
allele num: 120002
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*60-43_*60-41delCCT
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1939-43_1939-41delCCT
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1939-47_1938+49delCCT
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1660-43_1660-41delCCT
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1939-47_1938+49delCCT
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1657-43_1657-41delCCT
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.676-43_676-41delCCT
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1939-43_1939-41delCCT
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2069
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18928
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27896
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5975
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6395
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 851
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1833
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: CAGG
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

7-73010644-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010644
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010644
    reference: chr 7
allele count: 1
allele frequency: 8.33625102119075e-6
allele num: 119958
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1657-42C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1939-42C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1939-42C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1660-42C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1939-48C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.676-42C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1939-48C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*60-42C>T
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18907
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5969
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27852
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1379
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6391
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 853
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

7-73010647-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010647
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010647
    reference: chr 7
allele count: 1
allele frequency: 8.333888925928395e-6
allele num: 119992
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1938+47C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1938+47C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1660-45C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1939-45C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1657-45C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.676-45C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1939-45C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*60-45C>T
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18894
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27834
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5964
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2072
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1887
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 897
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: Other
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: InbreedingCoeff

7-73010653-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010653
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010653
    reference: chr 7
allele count: 1
allele frequency: 8.337641114575865e-6
allele num: 119938
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1938+41C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1656+41C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1938+41C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1938+41C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1659+41C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.675+41C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1938+41C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*59+41C>T
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1383
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2069
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18898
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27818
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5966
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 779
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1249
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

7-73010654-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010654
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010654
    reference: chr 7
allele count: 3
allele frequency: 2.500791917440523e-5
allele num: 119962
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1938+40C>G
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1656+40C>G
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1659+40C>G
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1938+40C>G
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*59+40C>G
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1938+40C>G
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1938+40C>G
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.675+40C>G
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27808
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5966
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18910
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 779
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41392
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1249
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

7-73010657-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010657
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010657
    reference: chr 7
allele count: 1
allele frequency: 8.339170752860335e-6
allele num: 119916
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.675+37C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1938+37C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1656+37C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*59+37C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1938+37C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1938+37C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1938+37C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1659+37C>T
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18900
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5988
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27725
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2070
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1884
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 966
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP

7-73010661-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010661
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010661
    reference: chr 7
allele count: 3
allele frequency: 2.502168546073264e-5
allele num: 119896
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1938+33G>C
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.675+33G>C
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1938+33G>C
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1656+33G>C
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1938+33G>C
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*59+33G>C
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1938+33G>C
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1659+33G>C
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5999
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2074
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27679
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18896
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41221
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4437
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1000
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 779
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ

7-73010666-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010666
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010666
    reference: chr 7
allele count: 2
allele frequency: 1.668502018887443e-5
allele num: 119868
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*59+28G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.675+28G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1938+28G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1938+28G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1656+28G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1938+28G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1938+28G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1659+28G>A
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5993
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27642
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2070
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18911
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 985
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1812
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

7-73010667-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010667
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010667
    reference: chr 7
allele count: 2
allele frequency: 1.668446342765617e-5
allele num: 119872
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1656+27C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1659+27C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1938+27C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.675+27C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1938+27C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1938+27C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*59+27C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1938+27C>T
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2069
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27642
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5988
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18935
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6417
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 778
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1883
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

7-73010670-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010670
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010670
    reference: chr 7
allele count: 2
allele frequency: 1.66858554003771e-5
allele num: 119862
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1938+24G>C
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1656+24G>C
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1938+24G>C
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*59+24G>C
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.675+24G>C
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1938+24G>C
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1938+24G>C
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1659+24G>C
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5985
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27662
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1379
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18917
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 995
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41256
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6415
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

7-73010673-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010673
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010673
    reference: chr 7
allele count: 1
allele frequency: 8.343902276216541e-6
allele num: 119848
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.675+21C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1938+21C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1938+21C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1938+21C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1938+21C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1659+21C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1656+21C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*59+21C>T
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18906
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2066
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1379
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5987
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27678
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1884
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6422
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1815
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

7-73010695-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010695
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010695
    reference: chr 7
allele count: 1
allele frequency: 8.350172848577966e-6
allele num: 119758
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1937A>C
  hgvsp: ENSP00000406296.2:p.Lys646Thr
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1937A>C
  hgvsp: ENSP00000346629.1:p.Lys646Thr
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1937A>C
  hgvsp: ENSP00000412330.2:p.Lys646Thr
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1655A>C
  hgvsp: ENSP00000392636.1:p.Lys552Thr
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1658A>C
  hgvsp: ENSP00000378616.1:p.Lys553Thr
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.674A>C
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*58A>C
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1937A>C
  hgvsp: ENSP00000320886.3:p.Lys646Thr
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18941
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2076
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27750
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6000
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Lys646Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQ

7-73010703-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010703
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010703
    reference: chr 7
allele count: 3
allele frequency: 2.507019655034095e-5
allele num: 119664
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1650C>T
  hgvsp: ENST00000395189.1:c.1650C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1647C>T
  hgvsp: ENST00000434326.1:c.1647C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*50C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1929C>T
  hgvsp: ENST00000354613.1:c.1929C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1929C>T
  hgvsp: ENST00000429400.2:c.1929C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1929C>T
  hgvsp: ENST00000414749.2:c.1929C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1929C>T
  hgvsp: ENST00000313375.3:c.1929C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.666C>T
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6006
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18925
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1383
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27614
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2076
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41268
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1895
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asp643Asp
num of homozygotes: 0
population: Other
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: DP

7-73010705-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010705
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010705
    reference: chr 7
allele count: 1
allele frequency: 8.363022061652199e-6
allele num: 119574
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1927G>C
  hgvsp: ENSP00000412330.2:p.Asp643His
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.664G>C
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1645G>C
  hgvsp: ENSP00000392636.1:p.Asp549His
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1927G>C
  hgvsp: ENSP00000320886.3:p.Asp643His
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1927G>C
  hgvsp: ENSP00000406296.2:p.Asp643His
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1648G>C
  hgvsp: ENSP00000378616.1:p.Asp550His
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1927G>C
  hgvsp: ENSP00000346629.1:p.Asp643His
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*48G>C
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27512
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6006
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18897
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2076
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 782
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1292
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asp643His
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

7-73010709-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010709
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010709
    reference: chr 7
allele count: 1
allele frequency: 8.375349670848758e-6
allele num: 119398
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1923T>C
  hgvsp: ENST00000429400.2:c.1923T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1641T>C
  hgvsp: ENST00000434326.1:c.1641T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*44T>C
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1923T>C
  hgvsp: ENST00000354613.1:c.1923T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1923T>C
  hgvsp: ENST00000414749.2:c.1923T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1923T>C
  hgvsp: ENST00000313375.3:c.1923T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.660T>C
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1644T>C
  hgvsp: ENST00000395189.1:c.1644T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1384
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5991
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27397
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2084
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18833
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1894
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1424
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1257
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg641Arg
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
reference allele: A
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

7-73010710-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010710
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010710
    reference: chr 7
allele count: 2
allele frequency: 1.675462846611376e-5
allele num: 119370
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1922G>A
  hgvsp: ENSP00000346629.1:p.Arg641His
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1922G>A
  hgvsp: ENSP00000412330.2:p.Arg641His
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1922G>A
  hgvsp: ENSP00000320886.3:p.Arg641His
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.659G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*43G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1643G>A
  hgvsp: ENSP00000378616.1:p.Arg548His
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1640G>A
  hgvsp: ENSP00000392636.1:p.Arg547His
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1922G>A
  hgvsp: ENSP00000406296.2:p.Arg641His
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2086
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18819
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27375
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5994
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6374
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40877
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg641His
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

7-73010713-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010713
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010713
    reference: chr 7
allele count: 2
allele frequency: 1.676052561008313e-5
allele num: 119328
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*40G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1919G>A
  hgvsp: ENSP00000412330.2:p.Gly640Asp
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.656G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1919G>A
  hgvsp: ENSP00000406296.2:p.Gly640Asp
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1919G>A
  hgvsp: ENSP00000320886.3:p.Gly640Asp
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1919G>A
  hgvsp: ENSP00000346629.1:p.Gly640Asp
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1640G>A
  hgvsp: ENSP00000378616.1:p.Gly547Asp
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1637G>A
  hgvsp: ENSP00000392636.1:p.Gly546Asp
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18801
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1385
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27351
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2083
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5993
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1898
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1258
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly640Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: African
population: South Asian
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP

7-73010716-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010716
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010716
    reference: chr 7
allele count: 5
allele frequency: 4.191395902491366e-5
allele num: 119292
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*37G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.653G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1634G>A
  hgvsp: ENSP00000392636.1:p.Arg545Gln
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1637G>A
  hgvsp: ENSP00000378616.1:p.Arg546Gln
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1916G>A
  hgvsp: ENSP00000320886.3:p.Arg639Gln
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1916G>A
  hgvsp: ENSP00000406296.2:p.Arg639Gln
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1916G>A
  hgvsp: ENSP00000412330.2:p.Arg639Gln
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1916G>A
  hgvsp: ENSP00000346629.1:p.Arg639Gln
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27334
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2081
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18786
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5972
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1385
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40839
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1820
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg639Gln
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: DP

7-73010717-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010717
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010717
    reference: chr 7
allele count: 5
allele frequency: 4.196320666040016e-5
allele num: 119152
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.652C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1636C>T
  hgvsp: ENSP00000378616.1:p.Arg546Trp
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1915C>T
  hgvsp: ENSP00000320886.3:p.Arg639Trp
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1915C>T
  hgvsp: ENSP00000346629.1:p.Arg639Trp
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1633C>T
  hgvsp: ENSP00000392636.1:p.Arg545Trp
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*36C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1915C>T
  hgvsp: ENSP00000412330.2:p.Arg639Trp
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1915C>T
  hgvsp: ENSP00000406296.2:p.Arg639Trp
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1383
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5972
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18746
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 27268
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2078
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1900
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4439
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg639Trp
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/7-73010719-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010719
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010719
    reference: chr 7
allele count: 1
allele frequency: 8.390247176681825e-6
allele num: 119186
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1913G>T
  hgvsp: ENSP00000406296.2:p.Ser638Ile
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1913G>T
  hgvsp: ENSP00000412330.2:p.Ser638Ile
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1634G>T
  hgvsp: ENSP00000378616.1:p.Ser545Ile
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.650G>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1913G>T
  hgvsp: ENSP00000346629.1:p.Ser638Ile
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*34G>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1913G>T
  hgvsp: ENSP00000320886.3:p.Ser638Ile
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1631G>T
  hgvsp: ENSP00000392636.1:p.Ser544Ile
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2081
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27291
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1383
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5973
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18751
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1902
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1625
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser638Ile
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

7-73010724-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010724
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010724
    reference: chr 7
allele count: 1
allele frequency: 8.403502579875292e-6
allele num: 118998
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.645C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1629C>T
  hgvsp: ENST00000395189.1:c.1629C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1908C>T
  hgvsp: ENST00000429400.2:c.1908C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1908C>T
  hgvsp: ENST00000354613.1:c.1908C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1908C>T
  hgvsp: ENST00000313375.3:c.1908C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1626C>T
  hgvsp: ENST00000434326.1:c.1626C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1908C>T
  hgvsp: ENST00000414749.2:c.1908C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*29C>T
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18677
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5977
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27181
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1384
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2083
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40552
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1908
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ile636Ile
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: QD
site quality: MQRankSum

7-73010727-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010727
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010727
    reference: chr 7
allele count: 1
allele frequency: 8.415100055539661e-6
allele num: 118834
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1623C>T
  hgvsp: ENST00000434326.1:c.1623C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1905C>T
  hgvsp: ENST00000313375.3:c.1905C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1905C>T
  hgvsp: ENST00000414749.2:c.1905C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.642C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1905C>T
  hgvsp: ENST00000429400.2:c.1905C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1626C>T
  hgvsp: ENST00000395189.1:c.1626C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1905C>T
  hgvsp: ENST00000354613.1:c.1905C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*26C>T
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1384
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27102
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5973
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18631
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1770
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40362
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 782
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Pro635Pro
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP

7-73010730-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010730
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010730
    reference: chr 7
allele count: 1
allele frequency: 8.416799932665601e-6
allele num: 118810
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*23A>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1620A>T
  hgvsp: ENSP00000392636.1:p.Gln540His
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1902A>T
  hgvsp: ENSP00000346629.1:p.Gln634His
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.639A>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1902A>T
  hgvsp: ENSP00000406296.2:p.Gln634His
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1902A>T
  hgvsp: ENSP00000412330.2:p.Gln634His
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1902A>T
  hgvsp: ENSP00000320886.3:p.Gln634His
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1623A>T
  hgvsp: ENSP00000378616.1:p.Gln541His
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5969
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18613
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2088
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27116
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 782
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1795
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6353
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gln634His
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Latino
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

7-73010733-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010733
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010733
    reference: chr 7
allele count: 9
allele frequency: 7.582139848357203e-5
allele num: 118700
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1899G>A
  hgvsp: ENST00000354613.1:c.1899G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.636G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*20G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1899G>A
  hgvsp: ENST00000429400.2:c.1899G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1617G>A
  hgvsp: ENST00000434326.1:c.1617G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1899G>A
  hgvsp: ENST00000313375.3:c.1899G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1899G>A
  hgvsp: ENST00000414749.2:c.1899G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1620G>A
  hgvsp: ENST00000395189.1:c.1620G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18607
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1384
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27071
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5968
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2083
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1903
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1775
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro633Pro
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ

7-73010734-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010734
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010734
    reference: chr 7
allele count: 8
allele frequency: 6.73911212197793e-5
allele num: 118710
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1898C>T
  hgvsp: ENSP00000412330.2:p.Pro633Leu
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1898C>T
  hgvsp: ENSP00000320886.3:p.Pro633Leu
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1898C>T
  hgvsp: ENSP00000346629.1:p.Pro633Leu
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*19C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.635C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1619C>T
  hgvsp: ENSP00000378616.1:p.Pro540Leu
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1616C>T
  hgvsp: ENSP00000392636.1:p.Pro539Leu
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1898C>T
  hgvsp: ENSP00000406296.2:p.Pro633Leu
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5961
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27077
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18622
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2081
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1385
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1824
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Pro633Leu
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD

7-73010737-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010737
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010737
    reference: chr 7
allele count: 2
allele frequency: 1.687080338765732e-5
allele num: 118548
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1895C>T
  hgvsp: ENSP00000346629.1:p.Pro632Leu
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.632C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1895C>T
  hgvsp: ENSP00000406296.2:p.Pro632Leu
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*16C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1895C>T
  hgvsp: ENSP00000320886.3:p.Pro632Leu
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1613C>T
  hgvsp: ENSP00000392636.1:p.Pro538Leu
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1616C>T
  hgvsp: ENSP00000378616.1:p.Pro539Leu
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1895C>T
  hgvsp: ENSP00000412330.2:p.Pro632Leu
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5958
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26955
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18601
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2085
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6348
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1272
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1819
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro632Leu
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP

7-73010738-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010738
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010738
    reference: chr 7
allele count: 1
allele frequency: 8.434263351438885e-6
allele num: 118564
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.631C>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*15C>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1615C>A
  hgvsp: ENSP00000378616.1:p.Pro539Thr
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1894C>A
  hgvsp: ENSP00000346629.1:p.Pro632Thr
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1894C>A
  hgvsp: ENSP00000412330.2:p.Pro632Thr
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1894C>A
  hgvsp: ENSP00000320886.3:p.Pro632Thr
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1894C>A
  hgvsp: ENSP00000406296.2:p.Pro632Thr
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1612C>A
  hgvsp: ENSP00000392636.1:p.Pro538Thr
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2082
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26959
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5961
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18605
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1269
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1909
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro632Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

7-73010740-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010740
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010740
    reference: chr 7
allele count: 1
allele frequency: 8.429997302400863e-6
allele num: 118624
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1610C>G
  hgvsp: ENSP00000392636.1:p.Ser537Cys
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1892C>G
  hgvsp: ENSP00000406296.2:p.Ser631Cys
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1892C>G
  hgvsp: ENSP00000320886.3:p.Ser631Cys
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1613C>G
  hgvsp: ENSP00000378616.1:p.Ser538Cys
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1892C>G
  hgvsp: ENSP00000346629.1:p.Ser631Cys
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1892C>G
  hgvsp: ENSP00000412330.2:p.Ser631Cys
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*13C>G
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.629C>G
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5961
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26986
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2083
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18618
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1908
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser631Cys
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/7-73010746-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010746
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010746
    reference: chr 7
allele count: 1
allele frequency: 8.456659619450317e-6
allele num: 118250
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1604G>T
  hgvsp: ENSP00000392636.1:p.Arg535Leu
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1886G>T
  hgvsp: ENSP00000406296.2:p.Arg629Leu
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1886G>T
  hgvsp: ENSP00000320886.3:p.Arg629Leu
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1886G>T
  hgvsp: ENSP00000346629.1:p.Arg629Leu
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1607G>T
  hgvsp: ENSP00000378616.1:p.Arg536Leu
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.623G>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1886G>T
  hgvsp: ENSP00000412330.2:p.Arg629Leu
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*7G>T
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18551
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2086
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26863
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5959
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1383
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4444
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Arg629Leu
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

7-73010746-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010746
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010746
    reference: chr 7
allele count: 1
allele frequency: 8.456659619450317e-6
allele num: 118250
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1886G>A
  hgvsp: ENSP00000406296.2:p.Arg629His
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.623G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*7G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1604G>A
  hgvsp: ENSP00000392636.1:p.Arg535His
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1607G>A
  hgvsp: ENSP00000378616.1:p.Arg536His
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1886G>A
  hgvsp: ENSP00000346629.1:p.Arg629His
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1886G>A
  hgvsp: ENSP00000412330.2:p.Arg629His
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1886G>A
  hgvsp: ENSP00000320886.3:p.Arg629His
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1383
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18551
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26863
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5959
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2086
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6350
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1908
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg629His
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff

7-73010747-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010747
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010747
    reference: chr 7
allele count: 2
allele frequency: 1.691703884152118e-5
allele num: 118224
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1885C>T
  hgvsp: ENSP00000320886.3:p.Arg629Cys
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.622C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1885C>T
  hgvsp: ENSP00000412330.2:p.Arg629Cys
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1603C>T
  hgvsp: ENSP00000392636.1:p.Arg535Cys
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1606C>T
  hgvsp: ENSP00000378616.1:p.Arg536Cys
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*6C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1885C>T
  hgvsp: ENSP00000406296.2:p.Arg629Cys
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1885C>T
  hgvsp: ENSP00000346629.1:p.Arg629Cys
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26856
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18542
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5964
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2088
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 644
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1919
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg629Cys
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: DP

7-73010750-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010750
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010750
    reference: chr 7
allele count: 13
allele frequency: 1.100221736996225e-4
allele num: 118158
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1600G>A
  hgvsp: ENSP00000392636.1:p.Val534Ile
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1882G>A
  hgvsp: ENSP00000412330.2:p.Val628Ile
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*3G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1882G>A
  hgvsp: ENSP00000346629.1:p.Val628Ile
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.619G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1603G>A
  hgvsp: ENSP00000378616.1:p.Val535Ile
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1882G>A
  hgvsp: ENSP00000406296.2:p.Val628Ile
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1882G>A
  hgvsp: ENSP00000320886.3:p.Val628Ile
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18523
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26823
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5958
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2086
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1942
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1912
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39998
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Val628Ile
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: DP

7-73010751-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010751
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010751
    reference: chr 7
allele count: 2
allele frequency: 1.693222032205083e-5
allele num: 118118
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.*2C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1881C>T
  hgvsp: ENST00000429400.2:c.1881C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1881C>T
  hgvsp: ENST00000414749.2:c.1881C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1599C>T
  hgvsp: ENST00000434326.1:c.1599C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1881C>T
  hgvsp: ENST00000354613.1:c.1881C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1881C>T
  hgvsp: ENST00000313375.3:c.1881C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1602C>T
  hgvsp: ENST00000395189.1:c.1602C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.618C>T
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18536
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2084
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26830
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1384
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1263
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5961
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40060
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 786
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1961
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser627Ser
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

7-73010754-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010754
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010754
    reference: chr 7
allele count: 5349
allele frequency: 4.531437962759018e-2
allele num: 118042
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1878G>A
  hgvsp: ENST00000429400.2:c.1878G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1878G>A
  hgvsp: ENST00000354613.1:c.1878G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1596G>A
  hgvsp: ENST00000434326.1:c.1596G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.615G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1878G>A
  hgvsp: ENST00000414749.2:c.1878G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: stop_retained_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.1727G>A
  hgvsp: ENST00000345114.5:c.1727G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1878G>A
  hgvsp: ENST00000313375.3:c.1878G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1599G>A
  hgvsp: ENST00000395189.1:c.1599G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
canonical: false
consequence: stop retained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17305
  bin: 2.75e1
  variant carriers: 78
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.25e1
  variant carriers: 254
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 7.75e1
  variant carriers: 317
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 4.75e1
  variant carriers: 109
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 7.5e0
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 5074
  bin: 3.25e1
  variant carriers: 98
genotype depth: GenotypeDepth
  all individuals: 25240
  bin: 2.25e1
  variant carriers: 78
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 1.75e1
  variant carriers: 95
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 9.75e1
  variant carriers: 1824
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 9.25e1
  variant carriers: 344
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 1.25e1
  variant carriers: 92
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 5.75e1
  variant carriers: 182
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 8.25e1
  variant carriers: 352
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 7.25e1
  variant carriers: 346
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 5.25e1
  variant carriers: 144
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 4.25e1
  variant carriers: 99
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 8.75e1
  variant carriers: 354
genotype depth: GenotypeDepth
  all individuals: 1647
  bin: 3.75e1
  variant carriers: 65
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 6.75e1
  variant carriers: 345
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 38382
  bin: 6.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 8.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 3
hgvs: p.Ter576Ter
num of homozygotes: 174
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD

7-73010763-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010763
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010763
    reference: chr 7
allele count: 1
allele frequency: 8.509624385179638e-6
allele num: 117514
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.1718T>C
  hgvsp: ENSP00000343767.5:p.Leu573Pro
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1587T>C
  hgvsp: ENST00000434326.1:c.1587T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.606T>C
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1869T>C
  hgvsp: ENST00000313375.3:c.1869T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1869T>C
  hgvsp: ENST00000429400.2:c.1869T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1590T>C
  hgvsp: ENST00000395189.1:c.1590T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1869T>C
  hgvsp: ENST00000414749.2:c.1869T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1869T>C
  hgvsp: ENST00000354613.1:c.1869T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25585
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19649
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1407
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6125
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1616
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6439
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu573Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: African
population: Latino
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

7-73010782-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010782
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010782
    reference: chr 7
allele count: 2
allele frequency: 1.717976910390324e-5
allele num: 116416
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.1699T>C
  hgvsp: ENSP00000343767.5:p.Ser567Pro
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1568T>C
  hgvsp: ENSP00000392636.1:p.Leu523Pro
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1850T>C
  hgvsp: ENSP00000412330.2:p.Leu617Pro
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1850T>C
  hgvsp: ENSP00000406296.2:p.Leu617Pro
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1571T>C
  hgvsp: ENSP00000378616.1:p.Leu524Pro
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1850T>C
  hgvsp: ENSP00000320886.3:p.Leu617Pro
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1850T>C
  hgvsp: ENSP00000346629.1:p.Leu617Pro
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.587T>C
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25013
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6032
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19312
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1590
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1813
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40101
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3858
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 445
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu617Pro
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP

http://identifiers.org/exac.variant/7-73010786-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010786
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010786
    reference: chr 7
allele count: 1
allele frequency: 8.628723294101405e-6
allele num: 115892
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1567G>T
  hgvsp: ENSP00000378616.1:p.Asp523Tyr
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.583G>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.1695G>T
  hgvsp: ENST00000345114.5:c.1695G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1846G>T
  hgvsp: ENSP00000406296.2:p.Asp616Tyr
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1846G>T
  hgvsp: ENSP00000320886.3:p.Asp616Tyr
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1846G>T
  hgvsp: ENSP00000346629.1:p.Asp616Tyr
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1846G>T
  hgvsp: ENSP00000412330.2:p.Asp616Tyr
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1564G>T
  hgvsp: ENSP00000392636.1:p.Asp522Tyr
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24906
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5992
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1695
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19230
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 544
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2123
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39585
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 933
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Asp616Tyr
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: QD

7-73010792-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010792
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010792
    reference: chr 7
allele count: 1
allele frequency: 8.67648845159387e-6
allele num: 115254
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1840T>C
  hgvsp: ENSP00000406296.2:p.Ser614Pro
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.577T>C
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1840T>C
  hgvsp: ENSP00000320886.3:p.Ser614Pro
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1840T>C
  hgvsp: ENSP00000346629.1:p.Ser614Pro
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1840T>C
  hgvsp: ENSP00000412330.2:p.Ser614Pro
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1558T>C
  hgvsp: ENSP00000392636.1:p.Ser520Pro
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1561T>C
  hgvsp: ENSP00000378616.1:p.Ser521Pro
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.1689T>C
  hgvsp: ENST00000345114.5:c.1689T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19248
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6030
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1741
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1169
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24675
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1839
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3857
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6039
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 929
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1936
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser614Pro
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

7-73010797-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010797
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010797
    reference: chr 7
allele count: 1
allele frequency: 8.624853377492582e-6
allele num: 115944
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1835G>A
  hgvsp: ENSP00000320886.3:p.Arg612Gln
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1835G>A
  hgvsp: ENSP00000346629.1:p.Arg612Gln
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1835G>A
  hgvsp: ENSP00000412330.2:p.Arg612Gln
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1553G>A
  hgvsp: ENSP00000392636.1:p.Arg518Gln
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1835G>A
  hgvsp: ENSP00000406296.2:p.Arg612Gln
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1556G>A
  hgvsp: ENSP00000378616.1:p.Arg519Gln
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.1684G>A
  hgvsp: ENSP00000343767.5:p.Gly562Ser
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.572G>A
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19825
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1715
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1578
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24421
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6114
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1608
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 943
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Arg612Gln
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum

7-73010798-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010798
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010798
    reference: chr 7
allele count: 3
allele frequency: 2.593092002904263e-5
allele num: 115692
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1834C>T
  hgvsp: ENSP00000320886.3:p.Arg612Trp
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1834C>T
  hgvsp: ENSP00000406296.2:p.Arg612Trp
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1552C>T
  hgvsp: ENSP00000392636.1:p.Arg518Trp
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.571C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.1683C>T
  hgvsp: ENST00000345114.5:c.1683C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1555C>T
  hgvsp: ENSP00000378616.1:p.Arg519Trp
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1834C>T
  hgvsp: ENSP00000346629.1:p.Arg612Trp
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1834C>T
  hgvsp: ENSP00000412330.2:p.Arg612Trp
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19796
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1743
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6101
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1801
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1657
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24280
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1599
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2515
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg612Trp
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum

http://identifiers.org/exac.variant/7-73010799-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010799
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010799
    reference: chr 7
allele count: 1
allele frequency: 8.635280301198577e-6
allele num: 115804
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1554G>T
  hgvsp: ENST00000395189.1:c.1554G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1551G>T
  hgvsp: ENST00000434326.1:c.1551G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.1682G>T
  hgvsp: ENSP00000343767.5:p.Gly561Val
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1833G>T
  hgvsp: ENST00000429400.2:c.1833G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1833G>T
  hgvsp: ENST00000313375.3:c.1833G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1833G>T
  hgvsp: ENST00000354613.1:c.1833G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.570G>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1833G>T
  hgvsp: ENST00000414749.2:c.1833G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12744
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6065
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1758
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1629
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1789
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19839
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24379
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3858
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6216
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly561Val
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

7-73010800-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010800
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010800
    reference: chr 7
allele count: 3
allele frequency: 2.591300141657741e-5
allele num: 115772
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1832G>A
  hgvsp: ENSP00000346629.1:p.Arg611Gln
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1832G>A
  hgvsp: ENSP00000412330.2:p.Arg611Gln
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1832G>A
  hgvsp: ENSP00000320886.3:p.Arg611Gln
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1550G>A
  hgvsp: ENSP00000392636.1:p.Arg517Gln
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.1681G>A
  hgvsp: ENSP00000343767.5:p.Gly561Ser
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1832G>A
  hgvsp: ENSP00000406296.2:p.Arg611Gln
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.569G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1553G>A
  hgvsp: ENSP00000378616.1:p.Arg518Gln
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1786
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24432
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1766
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19822
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6077
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1559
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2607
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 969
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 942
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg611Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum

http://identifiers.org/exac.variant/7-73010805-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010805
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010805
    reference: chr 7
allele count: 1
allele frequency: 8.651866207540966e-6
allele num: 115582
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1548T>G
  hgvsp: ENSP00000378616.1:p.Ser516Arg
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1827T>G
  hgvsp: ENSP00000346629.1:p.Ser609Arg
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1545T>G
  hgvsp: ENSP00000392636.1:p.Ser515Arg
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1827T>G
  hgvsp: ENSP00000406296.2:p.Ser609Arg
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1827T>G
  hgvsp: ENSP00000412330.2:p.Ser609Arg
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.564T>G
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1827T>G
  hgvsp: ENSP00000320886.3:p.Ser609Arg
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.1676T>G
  hgvsp: ENSP00000343767.5:p.Val559Gly
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1820
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19797
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24233
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6012
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3858
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 988
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser609Arg
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

7-73010814-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010814
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010814
    reference: chr 7
allele count: 1
allele frequency: 8.718091784070302e-6
allele num: 114704
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1544-5C>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.555C>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.1672-5C>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1541-5C>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1823-5C>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1823-5C>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1823-5C>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1823-5C>A
  variant of: http://identifiers.org/hgnc/12744
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2929
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1770
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19301
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2160
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5955
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22781
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 660
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1532
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3761
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1512
  bin: 7.75e1
  variant carriers: 0
hgvs: c.1823-5C>A
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

7-73010837-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010837
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010837
    reference: chr 7
allele count: 1
allele frequency: 8.913450396648543e-6
allele num: 112190
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1823-28T>C
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1541-28T>C
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.532T>C
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1544-28T>C
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1823-28T>C
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.1672-28T>C
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1823-28T>C
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1823-28T>C
  variant of: http://identifiers.org/hgnc/12744
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15101
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2961
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4860
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15160
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9432
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6166
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1551
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7972
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 544
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 791
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

7-73010840-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010840
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010840
    reference: chr 7
allele count: 1
allele frequency: 8.964107712718276e-6
allele num: 111556
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1823-31C>G
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.1672-31C>G
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.529C>G
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1544-31C>G
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1823-31C>G
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1541-31C>G
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1823-31C>G
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1823-31C>G
  variant of: http://identifiers.org/hgnc/12744
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4506
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13729
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10123
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8662
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1664
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13495
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3083
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8102
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3848
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 694
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1091
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3896
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4662
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD

7-73010844-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010844
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010844
    reference: chr 7
allele count: 3
allele frequency: 2.709684412088805e-5
allele num: 110714
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1823-35C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1823-35C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1823-35C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.525C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1544-35C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1823-35C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1541-35C>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.1672-35C>T
  variant of: http://identifiers.org/hgnc/12744
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11780
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3320
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4065
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12400
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1599
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11582
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10399
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1099
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1793
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 823
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1665
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5502
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1678
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

7-73010848-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010848
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010848
    reference: chr 7
allele count: 1
allele frequency: 9.072598936691405e-6
allele num: 110222
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.1672-39G>C
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1541-39G>C
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1823-39G>C
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.521G>C
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1544-39G>C
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1823-39G>C
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1823-39G>C
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1823-39G>C
  variant of: http://identifiers.org/hgnc/12744
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3806
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3561
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10334
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10647
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13393
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11793
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3639
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2143
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17433
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 547
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 541
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 519
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

7-73010861-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010861
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010861
    reference: chr 7
allele count: 2
allele frequency: 1.880936706479827e-5
allele num: 106330
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1541-52G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1544-52G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1823-52G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1823-52G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.508G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1823-52G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1823-52G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.1672-52G>A
  variant of: http://identifiers.org/hgnc/12744
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14293
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1121
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7749
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9974
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4458
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1576
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13887
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3215
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1604
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3368
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3849
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2539
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1184
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1862
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6137
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6528
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 540
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: QD

7-73010922-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010922
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010922
    reference: chr 7
allele count: 1
allele frequency: 1.27087410721094e-5
allele num: 78686
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.1672-113G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1822+47G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1543+47G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1822+47G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.447G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1540+47G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1822+47G>A
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1822+47G>A
  variant of: http://identifiers.org/hgnc/12744
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6346
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9245
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18403
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3488
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1323
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16461
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4305
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 426
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3196
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1465
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2890
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2725
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4270
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19926
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD

7-73010935-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010935
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010935
    reference: chr 7
allele count: 1
allele frequency: 1.286901912336242e-5
allele num: 77706
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1822+34T>C
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1822+34T>C
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1822+34T>C
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1540+34T>C
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1543+34T>C
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.434T>C
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.1672-126T>C
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1822+34T>C
  variant of: http://identifiers.org/hgnc/12744
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3853
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18178
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6171
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9829
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17428
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5417
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1218
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3138
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 23506
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3479
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD

7-73010939-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010939
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010939
    reference: chr 7
allele count: 1
allele frequency: 1.294833613880616e-5
allele num: 77230
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1822+30A>G
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1822+30A>G
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.430A>G
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1540+30A>G
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.1672-130A>G
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1822+30A>G
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1822+30A>G
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1543+30A>G
  variant of: http://identifiers.org/hgnc/12744
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3594
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10462
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5684
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17669
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3246
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18191
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3114
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4867
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11252
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24018
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5343
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1187
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff

7-73010939-T-TC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010939
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010940
    reference: chr 7
allele count: 1
allele frequency: 1.294833613880616e-5
allele num: 77230
alternate allele: TC
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.429dupG
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1543+29dupG
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1540+29dupG
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1822+29dupG
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1822+29dupG
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1822+29dupG
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.1672-131dupG
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1822+29dupG
  variant of: http://identifiers.org/hgnc/12744
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 3594
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5684
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17669
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10462
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18191
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3246
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 777
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3114
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 863
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1161
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1058
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5343
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/7-73010949-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 73010949
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 73010949
    reference: chr 7
allele count: 1
allele frequency: 1.312094890702496e-5
allele num: 76214
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000346629
  ensembl transcript: ENST00000354613
  gene symbol: MLXIPL
  hgvsc: ENST00000354613.1:c.1822+20G>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000320886
  ensembl transcript: ENST00000313375
  gene symbol: MLXIPL
  hgvsc: ENST00000313375.3:c.1822+20G>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000343767
  ensembl transcript: ENST00000345114
  gene symbol: MLXIPL
  hgvsc: ENST00000345114.5:c.1672-140G>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000406296
  ensembl transcript: ENST00000429400
  gene symbol: MLXIPL
  hgvsc: ENST00000429400.2:c.1822+20G>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000009950
  ensembl transcript: ENST00000467221
  gene symbol: MLXIPL
  hgvsc: ENST00000467221.1:n.420G>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000412330
  ensembl transcript: ENST00000414749
  gene symbol: MLXIPL
  hgvsc: ENST00000414749.2:c.1822+20G>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000378616
  ensembl transcript: ENST00000395189
  gene symbol: MLXIPL
  hgvsc: ENST00000395189.1:c.1543+20G>T
  variant of: http://identifiers.org/hgnc/12744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000009950
  ensembl protein: ENSP00000392636
  ensembl transcript: ENST00000434326
  gene symbol: MLXIPL
  hgvsc: ENST00000434326.1:c.1540+20G>T
  variant of: http://identifiers.org/hgnc/12744
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11555
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18160
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3263
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4936
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18002
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3177
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 644
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6468
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4411
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 100
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 784
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1259
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42299
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516760200212346e-5
allele num: 65930
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10260
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.79e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.52e0

DP
type: SiteQuality
SIO_000300: 1.618292e6

FS
type: SiteQuality
SIO_000300: 6.77e-1

QD
type: SiteQuality
SIO_000300: 5.8e0

MQRankSum
type: SiteQuality
SIO_000300: -6.870000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.062e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.95e-1

MQ
type: SiteQuality
SIO_000300: 5.867e1

GenotypeQuality
all individuals: 1907
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 644
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 783
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 647
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42219
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4411
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 33
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1846
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6467
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.744689144416293e-5
allele num: 10262
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.27e-2

DP
type: SiteQuality
SIO_000300: 1.617504e6

QD
type: SiteQuality
SIO_000300: 1.237e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.069e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.326e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.91e0

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 783
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 644
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 637
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42130
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1259
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4411
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 6465
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160362032954282e-4
allele num: 8618
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10258
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65880
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.064281382656155e-5
allele num: 16490
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 6.04e-1

QD
type: SiteQuality
SIO_000300: 9.550000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: 1.76e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.33e-1

DP
type: SiteQuality
SIO_000300: 1.617425e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.7e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.73e-1

FS
type: SiteQuality
SIO_000300: 1.776e0

MQ
type: SiteQuality
SIO_000300: 5.862e1

GenotypeQuality
all individuals: 141
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1843
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 644
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4412
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 783
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1260
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1905
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42147
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517819197377208e-5
allele num: 65884
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10246
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160362032954282e-4
allele num: 8618
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.74e0

VQSLOD
type: SiteQuality
SIO_000300: 7.14e-1

QD
type: SiteQuality
SIO_000300: 1.236e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.919999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.944e1

MQRankSum
type: SiteQuality
SIO_000300: 1.37e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.78e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.222e0

DP
type: SiteQuality
SIO_000300: 1.617488e6

GenotypeQuality
all individuals: 57
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1844
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42137
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 783
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 644
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6457
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1905
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4413
bin: 9.75e1
variant carriers: 3

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10252
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.553595822834765e-5
allele num: 65882
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.941e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.35e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.56e0

MQRankSum
type: SiteQuality
SIO_000300: -2.76e-1

DP
type: SiteQuality
SIO_000300: 1.617505e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.12e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.56e-1

QD
type: SiteQuality
SIO_000300: 1.394e1

GenotypeQuality
all individuals: 30
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 651
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42182
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 644
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1907
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4412
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1259
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517819197377208e-5
allele num: 65884
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.212856276531231e-4
allele num: 16490
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10252
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.617678e6

MQRankSum
type: SiteQuality
SIO_000300: -7.53e-1

QD
type: SiteQuality
SIO_000300: 1.36e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.954e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.45e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.15e0

FS
type: SiteQuality
SIO_000300: 4.911e0

VQSLOD
type: SiteQuality
SIO_000300: 4.17e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.612e0

GenotypeQuality
all individuals: 6448
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 668
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1253
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 645
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1902
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1837
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42109
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06501698204755e-5
allele num: 16488
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65846
num of homozygotes: 0

Latino
type: Population
allele count: 24
allele frequency: 2.081887578070784e-3
allele num: 11528
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.759906304899473e-5
allele num: 10246
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.78e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

MQRankSum
type: SiteQuality
SIO_000300: 1.96e-1

DP
type: SiteQuality
SIO_000300: 1.620051e6

BaseQRankSum
type: SiteQuality
SIO_000300: 6.94e-1

MQ
type: SiteQuality
SIO_000300: 5.958e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.425e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.38e0

QD
type: SiteQuality
SIO_000300: 1.297e1

GenotypeQuality
all individuals: 33
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6448
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1836
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 671
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 782
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4433
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 32
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42102
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1252
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.480278422273782e-4
allele num: 8620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65848
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10242
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.446e0

DP
type: SiteQuality
SIO_000300: 1.618113e6

VQSLOD
type: SiteQuality
SIO_000300: 9.340000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.13e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -4.39e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.668e0

QD
type: SiteQuality
SIO_000300: 1.231e1

GenotypeQuality
all individuals: 4431
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1253
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1900
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06501698204755e-5
allele num: 16488
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65860
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10246
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.617796e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.07e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.090000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.987e1

QD
type: SiteQuality
SIO_000300: 1.421e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 2.119e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.016e0

VQSLOD
type: SiteQuality
SIO_000300: 8.71e-1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 20

Latino
type: Population
allele count: 1
allele frequency: 8.674531575294934e-5
allele num: 11528
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

African
type: Population
allele count: 18
allele frequency: 1.757469244288225e-3
allele num: 10242
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.518925815663163e-5
allele num: 65836
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.954e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.48e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.618973e6

MQRankSum
type: SiteQuality
SIO_000300: 1.9e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.89e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.24e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

QD
type: SiteQuality
SIO_000300: 1.219e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.9e-1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65810
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10202
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.674531575294934e-5
allele num: 11528
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.5e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 4.2e0

VQSLOD
type: SiteQuality
SIO_000300: 3.24e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.54e-1

QD
type: SiteQuality
SIO_000300: 1.198e1

DP
type: SiteQuality
SIO_000300: 1.616657e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.37e-1

MQ
type: SiteQuality
SIO_000300: 5.964e1

GenotypeQuality
all individuals: 103
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1896
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 35
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.161710037174721e-4
allele num: 8608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.03905181583346e-5
allele num: 65810
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10202
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.54e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.37e-1

MQ
type: SiteQuality
SIO_000300: 5.964e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.2e0

MQRankSum
type: SiteQuality
SIO_000300: -1.5e-2

DP
type: SiteQuality
SIO_000300: 1.616657e6

QD
type: SiteQuality
SIO_000300: 1.198e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.24e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

GenotypeQuality
all individuals: 38
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10188
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.065752759917505e-5
allele num: 16486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65798
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.615248e6

QD
type: SiteQuality
SIO_000300: 8.67e0

VQSLOD
type: SiteQuality
SIO_000300: -2.324e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.088e0

MQ
type: SiteQuality
SIO_000300: 5.981e1

FS
type: SiteQuality
SIO_000300: 5.495e0

MQRankSum
type: SiteQuality
SIO_000300: -4.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.634e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.48e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65778
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.162250116225012e-4
allele num: 8604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10190
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.998e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.271e0

VQSLOD
type: SiteQuality
SIO_000300: 4.11e-1

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.71e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.02e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

DP
type: SiteQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10188
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65786
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.673026886383348e-5
allele num: 11530
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
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European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.040992579978105e-5
allele num: 65768
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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MQRankSum
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.956e1

BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.613482e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 86
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GenotypeQuality
all individuals: 98
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.521421616358325e-5
allele num: 65728
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10130
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.05e-1

QD
type: SiteQuality
SIO_000300: 1.31e1

FS
type: SiteQuality
SIO_000300: 7.3e-1

MQ
type: SiteQuality
SIO_000300: 5.949e1

VQSLOD
type: SiteQuality
SIO_000300: -2.956e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 6.31e-1

DP
type: SiteQuality
SIO_000300: 1.612702e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.617e0

MQRankSum
type: SiteQuality
SIO_000300: 1.49e0

GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.521329033043267e-5
allele num: 65732
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10136
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.734304543877905e-4
allele num: 11532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.14e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.36e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.4e-1

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.612848e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.87e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 1.637e1

MQ
type: SiteQuality
SIO_000300: 5.632e1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10126
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.521884702014975e-5
allele num: 65708
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.85e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.751e-1

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.966e1

DP
type: SiteQuality
SIO_000300: 1.611941e6

FS
type: SiteQuality
SIO_000300: 1.747e0

QD
type: SiteQuality
SIO_000300: 1.585e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.896e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -7.39e-1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65726
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10134
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.064281382656155e-5
allele num: 16490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.17e-1

MQ
type: SiteQuality
SIO_000300: 5.98e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.161e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.34e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.06e0

MQRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

DP
type: SiteQuality
SIO_000300: 1.611766e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.345e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6383
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65694
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.881422924901186e-5
allele num: 10120
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.611658e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.74e-1

FS
type: SiteQuality
SIO_000300: 1.0443e1

MQRankSum
type: SiteQuality
SIO_000300: 1.16e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.917e0

VQSLOD
type: SiteQuality
SIO_000300: -2.018e0

QD
type: SiteQuality
SIO_000300: 9.16e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

MQ
type: SiteQuality
SIO_000300: 5.804e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.84e-1

GenotypeQuality
all individuals: 1815
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 643
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.565793078257694e-5
allele num: 65706
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10130
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.92e-1

FS
type: SiteQuality
SIO_000300: 1.2534e1

MQ
type: SiteQuality
SIO_000300: 5.986e1

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -9.83e-1

QD
type: SiteQuality
SIO_000300: 1.314e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

DP
type: SiteQuality
SIO_000300: 1.611991e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.473e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.522394421946838e-5
allele num: 65686
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10108
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
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MQ
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.568574300246703e-5
allele num: 65666
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10104
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.611385e6

QD
type: SiteQuality
SIO_000300: 1.528e1

ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 8.76e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.16e-1

MQ
type: SiteQuality
SIO_000300: 5.989e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65648
num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.981375074301565e-4
allele num: 10094
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.956e1

InbreedingCoeff
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DP
type: SiteQuality
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ReadPosRankSum
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.327205026762858e-4
allele num: 8594
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65662
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10084
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.71e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 7.5e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.611098e6

MQ
type: SiteQuality
SIO_000300: 5.953e1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.43e-1

QD
type: SiteQuality
SIO_000300: 1.381e1

GenotypeQuality
all individuals: 73
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1882
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1249
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4434
bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 643
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1815
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.982160555004955e-4
allele num: 10090
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.610935e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.09e0

FS
type: SiteQuality
SIO_000300: 2.334e0

QD
type: SiteQuality
SIO_000300: 1.573e1

MQRankSum
type: SiteQuality
SIO_000300: 9.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

VQSLOD
type: SiteQuality
SIO_000300: 5.0e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.97e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.96e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 200
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 779
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.163873370577281e-4
allele num: 8592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10094
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.39e-1

QD
type: SiteQuality
SIO_000300: 1.331e1

FS
type: SiteQuality
SIO_000300: 2.43e0

VQSLOD
type: SiteQuality
SIO_000300: 1.29e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.938e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.64e-1

MQ
type: SiteQuality
SIO_000300: 5.977e1

DP
type: SiteQuality
SIO_000300: 1.610913e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.68e-1

GenotypeQuality
all individuals: 4435
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6414
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1892
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1816
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1254
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.52522725886157e-5
allele num: 65564
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10084
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.86e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.44e0

DP
type: SiteQuality
SIO_000300: 1.611519e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.815e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.32e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.27e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.346e1

MQ
type: SiteQuality
SIO_000300: 5.973e1

GenotypeQuality
all individuals: 237
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4437
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 75
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 645
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 781
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.976781107362572e-4
allele num: 10078
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65486
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.600000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.977e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.35e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.34e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.453e0

FS
type: SiteQuality
SIO_000300: 4.18e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.86e-1

QD
type: SiteQuality
SIO_000300: 1.747e1

DP
type: SiteQuality
SIO_000300: 1.610017e6

GenotypeQuality
all individuals: 76
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41104
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
all individuals: 1895
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variant carriers: 0

GenotypeQuality
all individuals: 40
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variant carriers: 0

GenotypeQuality
all individuals: 25
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 243
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GenotypeQuality
all individuals: 1259
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variant carriers: 0

GenotypeQuality
all individuals: 6405
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4435
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 644
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1819
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65414
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10064
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.165229550221394e-4
allele num: 8582
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.943e1

MQRankSum
type: SiteQuality
SIO_000300: 2.99e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.8e-1

FS
type: SiteQuality
SIO_000300: 1.655e0

QD
type: SiteQuality
SIO_000300: 1.427e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.37e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.107e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.18e-1

DP
type: SiteQuality
SIO_000300: 1.608483e6

GenotypeQuality
all individuals: 84
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6374
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 644
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variant carriers: 0

GenotypeQuality
all individuals: 40914
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 781
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1818
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4436
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 1
allele frequency: 9.986019572598362e-5
allele num: 10014
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65292
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.906e1

FS
type: SiteQuality
SIO_000300: 1.27e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.11e0

DP
type: SiteQuality
SIO_000300: 1.606132e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.75e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.59e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

QD
type: SiteQuality
SIO_000300: 1.413e1

VQSLOD
type: SiteQuality
SIO_000300: -9.6e-2

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1445
bin: 2.25e1
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GenotypeQuality
all individuals: 144
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.063545961678389e-5
allele num: 16492
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.165772907437631e-4
allele num: 8578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10004
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65276
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

MQ
type: SiteQuality
SIO_000300: 5.976e1

FS
type: SiteQuality
SIO_000300: 1.86e0

MQRankSum
type: SiteQuality
SIO_000300: 2.48e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.26e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.829e0

QD
type: SiteQuality
SIO_000300: 1.243e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.05e0

DP
type: SiteQuality
SIO_000300: 1.605899e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.29e0

GenotypeQuality
all individuals: 82
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1501
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 251
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GenotypeQuality
all individuals: 91
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GenotypeQuality
all individuals: 85
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 782
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65240
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9996
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.212709192335678e-4
allele num: 16492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.81e-1

QD
type: SiteQuality
SIO_000300: 1.333e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.89e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.04e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.357e0

VQSLOD
type: SiteQuality
SIO_000300: 7.33e-1

FS
type: SiteQuality
SIO_000300: 4.084e0

DP
type: SiteQuality
SIO_000300: 1.605071e6

GenotypeQuality
all individuals: 97
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 3.25e1
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GenotypeQuality
all individuals: 80
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variant carriers: 0

GenotypeQuality
all individuals: 1540
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
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GenotypeQuality
all individuals: 6385
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4438
bin: 9.75e1
variant carriers: 5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

South Asian
type: Population
allele count: 1
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allele num: 16492
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Other
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East Asian
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allele frequency: 1.165772907437631e-4
allele num: 8578
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 4.600521392424475e-5
allele num: 65210
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MQ
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MQRankSum
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FS
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BaseQRankSum
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ReadPosRankSum
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SIO_000300: -1.13e-1

InbreedingCoeff
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VQSLOD
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QD
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.607870242373975e-5
allele num: 65106
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 2
allele frequency: 2.331002331002331e-4
allele num: 8580
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MQ
type: SiteQuality
SIO_000300: 5.921e1

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
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VQSLOD
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MQRankSum
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DP
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QD
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FS
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65134
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African
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allele frequency: 0.0e0
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East Asian
type: Population
allele count: 1
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allele num: 8580
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.429e0

ReadPosRankSum
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SIO_000300: -1.64e-1

ClippingRankSum
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InbreedingCoeff
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MQRankSum
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MQ
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DP
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VQSLOD
type: SiteQuality
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QD
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BaseQRankSum
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SIO_000300: 7.81e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64996
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African
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allele frequency: 1.008471157724889e-4
allele num: 9916
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.849e0

ReadPosRankSum
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SIO_000300: 1.96e0

ClippingRankSum
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VQSLOD
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FS
type: SiteQuality
SIO_000300: 4.979e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.898e1

QD
type: SiteQuality
SIO_000300: 1.412e1

MQRankSum
type: SiteQuality
SIO_000300: 5.1e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 6.06501698204755e-5
allele num: 16488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64882
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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VQSLOD
type: SiteQuality
SIO_000300: -1.543e0

BaseQRankSum
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.882e1

MQRankSum
type: SiteQuality
SIO_000300: -5.2e-2

QD
type: SiteQuality
SIO_000300: 2.001e1

ClippingRankSum
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SIO_000300: -7.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 6.95e0

DP
type: SiteQuality
SIO_000300: 1.59867e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele num: 882
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.541972491210757e-5
allele num: 64852
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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Latino
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allele count: 0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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MQ
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DP
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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QD
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ClippingRankSum
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.389360585383927e-4
allele num: 64778
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East Asian
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Other
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VQSLOD
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QD
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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DP
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ClippingRankSum
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BaseQRankSum
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FS
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MQ
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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African
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European (Non-Finnish)
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allele frequency: 6.17455466024513e-5
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European (Finnish)
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Latino
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allele frequency: 2.604618857440528e-4
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Other
type: Population
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BaseQRankSum
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MQ
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MQRankSum
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QD
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DP
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FS
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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South Asian
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European (Non-Finnish)
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Latino
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European (Finnish)
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African
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ReadPosRankSum
type: SiteQuality
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QD
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MQRankSum
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MQ
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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FS
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 640
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64692
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9810
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.063545961678389e-5
allele num: 16492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.757999999999999e0

MQRankSum
type: SiteQuality
SIO_000300: 1.62e0

DP
type: SiteQuality
SIO_000300: 1.595801e6

VQSLOD
type: SiteQuality
SIO_000300: -1.695e-1

QD
type: SiteQuality
SIO_000300: 1.014e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.031e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.75e0

GenotypeQuality
all individuals: 60
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.017501017501017e-4
allele num: 9828
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64734
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.815e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.45e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.19e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.009e0

DP
type: SiteQuality
SIO_000300: 1.596045e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.009e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.81e-1

QD
type: SiteQuality
SIO_000300: 1.692e1

GenotypeQuality
all individuals: 1893
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.55115716324378e-5
allele num: 64468
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9736
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.32e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.81e-1

MQ
type: SiteQuality
SIO_000300: 5.931e1

FS
type: SiteQuality
SIO_000300: 5.39e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.17e0

DP
type: SiteQuality
SIO_000300: 1.593208e6

VQSLOD
type: SiteQuality
SIO_000300: 4.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

QD
type: SiteQuality
SIO_000300: 1.253e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.98e0

GenotypeQuality
all individuals: 643
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4444
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64468
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9736
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.064281382656155e-5
allele num: 16490
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.32e-1

DP
type: SiteQuality
SIO_000300: 1.593208e6

QD
type: SiteQuality
SIO_000300: 1.253e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.17e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.98e0

MQ
type: SiteQuality
SIO_000300: 5.931e1

MQRankSum
type: SiteQuality
SIO_000300: 8.81e-1

FS
type: SiteQuality
SIO_000300: 5.39e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

GenotypeQuality
all individuals: 39
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 302
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GenotypeQuality
all individuals: 90
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 784
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.064281382656155e-5
allele num: 16490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9728
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.551542232979582e-5
allele num: 64452
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.04e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQ
type: SiteQuality
SIO_000300: 5.953e1

VQSLOD
type: SiteQuality
SIO_000300: 6.929999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.62e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.7e-1

FS
type: SiteQuality
SIO_000300: 2.208e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.61e-1

QD
type: SiteQuality
SIO_000300: 1.156e1

DP
type: SiteQuality
SIO_000300: 1.592896e6

GenotypeQuality
all individuals: 4457
bin: 9.75e1
variant carriers: 13

GenotypeQuality
all individuals: 1269
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 643
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 1.737921445950643e-4
allele num: 11508
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.212856276531231e-4
allele num: 16490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9706
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.397255169844128e-4
allele num: 64412
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.39e0

FS
type: SiteQuality
SIO_000300: 4.348e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.15e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.7e-3

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.48e-1

MQ
type: SiteQuality
SIO_000300: 5.96e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.79e-1

QD
type: SiteQuality
SIO_000300: 1.547e1

DP
type: SiteQuality
SIO_000300: 1.592196e6

GenotypeQuality
all individuals: 72
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 75
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GenotypeQuality
all individuals: 1913
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.553084425669379e-5
allele num: 64388
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9698
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.168770453482936e-4
allele num: 8556
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.9e-2

DP
type: SiteQuality
SIO_000300: 1.592092e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.62e0

FS
type: SiteQuality
SIO_000300: 6.667e0

MQRankSum
type: SiteQuality
SIO_000300: 4.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.28e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 1.384e1

GenotypeQuality
all individuals: 1909
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 5675
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GenotypeQuality
all individuals: 72
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GenotypeQuality
all individuals: 120
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GenotypeQuality
all individuals: 204
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GenotypeQuality
all individuals: 258
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GenotypeQuality
all individuals: 73
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GenotypeQuality
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GenotypeQuality
all individuals: 8617
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GenotypeQuality
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GenotypeQuality
all individuals: 87
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GenotypeQuality
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GenotypeQuality
all individuals: 1412
bin: 7.75e1
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GenotypeQuality
all individuals: 526
bin: 9.25e1
variant carriers: 13

Other
type: Population
allele count: 31
allele frequency: 3.538812785388128e-2
allele num: 876
num of homozygotes: 0

African
type: Population
allele count: 120
allele frequency: 1.243265644426026e-2
allele num: 9652
num of homozygotes: 1

Latino
type: Population
allele count: 285
allele frequency: 2.477829942618675e-2
allele num: 11502
num of homozygotes: 7

European (Non-Finnish)
type: Population
allele count: 4400
allele frequency: 6.836331997141171e-2
allele num: 64362
num of homozygotes: 157

European (Finnish)
type: Population
allele count: 315
allele frequency: 4.771281429869736e-2
allele num: 6602
num of homozygotes: 6

East Asian
type: Population
allele count: 1
allele frequency: 1.168770453482936e-4
allele num: 8556
num of homozygotes: 0

South Asian
type: Population
allele count: 197
allele frequency: 1.194518554450643e-2
allele num: 16492
num of homozygotes: 3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.343e0

MQRankSum
type: SiteQuality
SIO_000300: 1.34e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.91e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.51e-2

QD
type: SiteQuality
SIO_000300: 1.327e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.22e-1

MQ
type: SiteQuality
SIO_000300: 5.96e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.873603e6

VQSLOD
type: SiteQuality
SIO_000300: 5.49e0

GenotypeQuality
all individuals: 224
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
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GenotypeQuality
all individuals: 84
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GenotypeQuality
all individuals: 104
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GenotypeQuality
all individuals: 951
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GenotypeQuality
all individuals: 62
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GenotypeQuality
all individuals: 452
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GenotypeQuality
all individuals: 2170
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GenotypeQuality
all individuals: 41266
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GenotypeQuality
all individuals: 1661
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GenotypeQuality
all individuals: 76
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GenotypeQuality
all individuals: 554
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GenotypeQuality
all individuals: 3858
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GenotypeQuality
all individuals: 492
bin: 7.5e0
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.563379400913014e-5
allele num: 63964
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9554
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.2e-2

QD
type: SiteQuality
SIO_000300: 5.72e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.66e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.322e0

MQRankSum
type: SiteQuality
SIO_000300: 8.49e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.582e0

DP
type: SiteQuality
SIO_000300: 1.596502e6

GenotypeQuality
all individuals: 255
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2192
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 942
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 556
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6252
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63294
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9192
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.744287458573173e-4
allele num: 11466
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.126e1

MQRankSum
type: SiteQuality
SIO_000300: -6.96e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.157e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.86e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.02e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.546e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.581845e6

GenotypeQuality
all individuals: 235
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 360
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9054
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.589067217543302e-5
allele num: 62930
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.5e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.52e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.127e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.107e0

VQSLOD
type: SiteQuality
SIO_000300: -3.357e-1

DP
type: SiteQuality
SIO_000300: 1.576875e6

MQRankSum
type: SiteQuality
SIO_000300: -8.080000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.449e1

GenotypeQuality
all individuals: 394
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 551
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6530
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.066488716330988e-5
allele num: 16484
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8886
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11422
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.053e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.85e0

MQRankSum
type: SiteQuality
SIO_000300: 6.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.65e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.07e-1

QD
type: SiteQuality
SIO_000300: 1.438e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

MQ
type: SiteQuality
SIO_000300: 5.83e1

DP
type: SiteQuality
SIO_000300: 1.574618e6

GenotypeQuality
all individuals: 40358
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 456
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.072382803011902e-5
allele num: 16468
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9082
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11428
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63018
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.5797e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.2e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-3

QD
type: SiteQuality
SIO_000300: 1.478e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.51e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.05e0

MQRankSum
type: SiteQuality
SIO_000300: -1.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.82e-1

GenotypeQuality
all individuals: 978
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variant carriers: 0

GenotypeQuality
all individuals: 558
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1564
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9030
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.075334143377886e-5
allele num: 16460
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.764241893076249e-5
allele num: 11410
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.590786166523496e-5
allele num: 62862
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.917e1

DP
type: SiteQuality
SIO_000300: 1.577855e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.35e0

VQSLOD
type: SiteQuality
SIO_000300: 3.81e-1

QD
type: SiteQuality
SIO_000300: 1.138e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.46e-1

FS
type: SiteQuality
SIO_000300: 2.004e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e0

MQRankSum
type: SiteQuality
SIO_000300: 7.21e-1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 452
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variant carriers: 0

GenotypeQuality
all individuals: 40181
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9052
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62936
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.761170492377782e-5
allele num: 11414
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8524
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-3

QD
type: SiteQuality
SIO_000300: 1.097e1

MQ
type: SiteQuality
SIO_000300: 5.73e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.572e0

MQRankSum
type: SiteQuality
SIO_000300: -6.15e-1

FS
type: SiteQuality
SIO_000300: 4.087e0

DP
type: SiteQuality
SIO_000300: 1.577571e6

VQSLOD
type: SiteQuality
SIO_000300: -1.283e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.04e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.86e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11414
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.173158141717503e-4
allele num: 8524
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9052
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.215066828675577e-4
allele num: 16460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.34e0

VQSLOD
type: SiteQuality
SIO_000300: -1.89e0

MQRankSum
type: SiteQuality
SIO_000300: -4.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.906e1

QD
type: SiteQuality
SIO_000300: 2.661e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.34e0

DP
type: SiteQuality
SIO_000300: 1.57823e6

FS
type: SiteQuality
SIO_000300: 2.519e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.7e-2

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1572
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1557
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11408
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16442
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9018
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62788
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.146788990825688e-3
allele num: 872
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.08e0

MQ
type: SiteQuality
SIO_000300: 5.931e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

DP
type: SiteQuality
SIO_000300: 1.573788e6

QD
type: SiteQuality
SIO_000300: 1.222e1

MQRankSum
type: SiteQuality
SIO_000300: -9.27e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.67e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.192e0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3853
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variant carriers: 1

GenotypeQuality
all individuals: 553
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variant carriers: 0

GenotypeQuality
all individuals: 447
bin: 8.75e1
variant carriers: 0

East Asian
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allele count: 1
allele frequency: 1.183712121212121e-4
allele num: 8448
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11300
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6516
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8894
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62310
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

DP
type: SiteQuality
SIO_000300: 1.550407e6

MQRankSum
type: SiteQuality
SIO_000300: 6.68e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.01e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.34e0

QD
type: SiteQuality
SIO_000300: 1.08e1

VQSLOD
type: SiteQuality
SIO_000300: 2.14e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.68e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8658
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6440
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11032
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 60718
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.148548942449582e-5
allele num: 16264
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.913e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.5e-3

ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.0517e1

DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -5.23e-1

QD
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BaseQRankSum
type: SiteQuality
SIO_000300: 5.7e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.4e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6428
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 60314
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East Asian
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele count: 1
allele frequency: 6.15839389087326e-5
allele num: 16238
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.6e-3

DP
type: SiteQuality
SIO_000300: 1.372403e6

VQSLOD
type: SiteQuality
SIO_000300: -1.26e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.1e-2

FS
type: SiteQuality
SIO_000300: 1.1422e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.0e-2

QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10890
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6410
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 5.016554630279924e-5
allele num: 59802
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8116
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.84e0

DP
type: SiteQuality
SIO_000300: 1.337916e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.61e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.72e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.06e-1

QD
type: SiteQuality
SIO_000300: 1.329e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.919e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6376
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59480
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10842
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16188
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.185114956150747e-4
allele num: 8438
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8064
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.66e-1

QD
type: SiteQuality
SIO_000300: 1.929e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.21e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.4e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.317147e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.15e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.496748024337367e-5
allele num: 57196
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 810
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6202
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15888
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7686
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MQRankSum
type: SiteQuality
SIO_000300: -2.7e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.855e1

DP
type: SiteQuality
SIO_000300: 1.281833e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.97e-1

QD
type: SiteQuality
SIO_000300: 1.329e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42804
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3654
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6200
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7086
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.885191610156126e-5
allele num: 12682
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5658
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 602
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BaseQRankSum
type: SiteQuality
SIO_000300: -4.305e0

MQRankSum
type: SiteQuality
SIO_000300: -3.44e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.86e-1

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 8.24602e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.02e-2

FS
type: SiteQuality
SIO_000300: 6.435e0

QD
type: SiteQuality
SIO_000300: 1.064e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
type: Population
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allele frequency: 0.0e0
allele num: 7056
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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African
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South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.354048964218456e-5
allele num: 42480
num of homozygotes: 0

Other
type: Population
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MQRankSum
type: SiteQuality
SIO_000300: -2.07e0

InbreedingCoeff
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DP
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SIO_000300: 8.21837e5

FS
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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MQ
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VQSLOD
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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African
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Latino
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East Asian
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allele num: 6256
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South Asian
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BaseQRankSum
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MQRankSum
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VQSLOD
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ReadPosRankSum
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MQ
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QD
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FS
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DP
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ClippingRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.362948960302458e-5
allele num: 42320
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6256
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5518
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3522
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.889999999999999e-1

FS
type: SiteQuality
SIO_000300: 3.323e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.41e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.27e-1

QD
type: SiteQuality
SIO_000300: 4.38e0

DP
type: SiteQuality
SIO_000300: 8.18016e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.19e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.64e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.36e-1