9-139733902-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139733902
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139733902
    reference: chr 9
allele count: 1
allele frequency: 8.761631065239105e-6
allele num: 114134
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*100C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1104C>T
  hgvsp: ENST00000435930.1:c.1104C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1377C>T
  hgvsp: ENST00000371675.3:c.1377C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1382C>T
  hgvsp: ENSP00000433031.1:p.Thr461Ile
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*100C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1722C>T
  hgvsp: ENST00000311502.7:c.1722C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1725C>T
  hgvsp: ENST00000371663.4:c.1725C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-1035C>T
  variant of: http://identifiers.org/hgnc/24703
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2778
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14140
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30668
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3505
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5742
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 590
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5567
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr461Ile
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

9-139733911-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139733911
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139733911
    reference: chr 9
allele count: 2
allele frequency: 1.759912708329667e-5
allele num: 113642
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-1026C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*109C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1734C>T
  hgvsp: ENST00000371663.4:c.1734C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*109C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1391C>T
  hgvsp: ENSP00000433031.1:p.Ala464Val
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1113C>T
  hgvsp: ENST00000435930.1:c.1113C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1731C>T
  hgvsp: ENST00000311502.7:c.1731C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1386C>T
  hgvsp: ENST00000371675.3:c.1386C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2931
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1960
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6337
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3579
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13897
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30003
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1145
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 641
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 885
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 845
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala464Val
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum

9-139733912-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139733912
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139733912
    reference: chr 9
allele count: 8
allele frequency: 7.044982211419916e-5
allele num: 113556
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1387G>A
  hgvsp: ENSP00000360740.3:p.Glu463Lys
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1735G>A
  hgvsp: ENSP00000360727.4:p.Glu579Lys
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*110G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1732G>A
  hgvsp: ENSP00000311134.7:p.Glu578Lys
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*110G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1114G>A
  hgvsp: ENSP00000408442.1:p.Glu372Lys
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-1025G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1392G>A
  hgvsp: ENST00000484471.2:c.1392G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2965
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6484
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3602
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29924
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13860
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1892
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6103
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2314
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 680
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1051
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Glu579Lys
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

9-139733916-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139733916
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139733916
    reference: chr 9
allele count: 1
allele frequency: 8.811038468993955e-6
allele num: 113494
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1739G>A
  hgvsp: ENSP00000360727.4:p.Gly580Glu
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1118G>A
  hgvsp: ENSP00000408442.1:p.Gly373Glu
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1396G>A
  hgvsp: ENSP00000433031.1:p.Asp466Asn
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*114G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-1021G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1391G>A
  hgvsp: ENSP00000360740.3:p.Gly464Glu
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1736G>A
  hgvsp: ENSP00000311134.7:p.Gly579Glu
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*114G>A
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13872
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3566
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29609
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6796
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3052
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1470
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 883
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3830
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly580Glu
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum

9-139733921-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139733921
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139733921
    reference: chr 9
allele count: 1
allele frequency: 8.8710678991537e-6
allele num: 112726
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1123G>T
  hgvsp: ENSP00000408442.1:p.Asp375Tyr
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*119G>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1744G>T
  hgvsp: ENSP00000360727.4:p.Asp582Tyr
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1741G>T
  hgvsp: ENSP00000311134.7:p.Asp581Tyr
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1401G>T
  hgvsp: ENSP00000433031.1:p.Gln467His
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*119G>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-1016G>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1396G>T
  hgvsp: ENSP00000360740.3:p.Asp466Tyr
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3420
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8217
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1786
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13703
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4624
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26961
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34604
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 866
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 701
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asp582Tyr
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum

9-139733929-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139733929
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139733929
    reference: chr 9
allele count: 1
allele frequency: 8.968931620865323e-6
allele num: 111496
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1409G>C
  hgvsp: ENSP00000433031.1:p.Ser470Thr
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1131G>C
  hgvsp: ENSP00000408442.1:p.Gln377His
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*127G>C
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-1008G>C
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1749G>C
  hgvsp: ENSP00000311134.7:p.Gln583His
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*127G>C
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1752G>C
  hgvsp: ENSP00000360727.4:p.Gln584His
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1404G>C
  hgvsp: ENSP00000360740.3:p.Gln468His
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12508
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24471
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6006
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10034
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3940
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1697
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1517
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 831
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gln584His
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD

http://identifiers.org/exac.variant/9-139733930-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139733930
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139733930
    reference: chr 9
allele count: 5
allele frequency: 4.490426410891978e-5
allele num: 111348
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1410C>A
  hgvsp: ENSP00000433031.1:p.Ser470Arg
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1753C>A
  hgvsp: ENSP00000360727.4:p.Arg585Ser
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1132C>A
  hgvsp: ENSP00000408442.1:p.Arg378Ser
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1405C>A
  hgvsp: ENSP00000360740.3:p.Arg469Ser
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*128C>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*128C>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1750C>A
  hgvsp: ENSP00000311134.7:p.Arg584Ser
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-1007C>A
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24486
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3938
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10038
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12465
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5981
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1741
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8925
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 939
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1252
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 720
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3095
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg585Ser
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff

9-139733930-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139733930
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139733930
    reference: chr 9
allele count: 1
allele frequency: 8.980852821783957e-6
allele num: 111348
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1132C>T
  hgvsp: ENSP00000408442.1:p.Arg378Cys
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1753C>T
  hgvsp: ENSP00000360727.4:p.Arg585Cys
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1750C>T
  hgvsp: ENSP00000311134.7:p.Arg584Cys
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-1007C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1410C>T
  hgvsp: ENST00000484471.2:c.1410C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*128C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*128C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1405C>T
  hgvsp: ENSP00000360740.3:p.Arg469Cys
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5981
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12465
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24486
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3938
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1741
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10038
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30826
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3701
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 601
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1252
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 814
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg585Cys
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD

9-139733931-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139733931
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139733931
    reference: chr 9
allele count: 36
allele frequency: 3.242133323727013e-4
allele num: 111038
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-1006G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1133G>A
  hgvsp: ENSP00000408442.1:p.Arg378His
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*129G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1754G>A
  hgvsp: ENSP00000360727.4:p.Arg585His
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*129G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1751G>A
  hgvsp: ENSP00000311134.7:p.Arg584His
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1411G>A
  hgvsp: ENSP00000433031.1:p.Ala471Thr
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1406G>A
  hgvsp: ENSP00000360740.3:p.Arg469His
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10208
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6077
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4012
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1730
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12435
  bin: 2.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24175
  bin: 2.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 591
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3778
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 983
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3312
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg585His
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: East Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP

9-139733932-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139733932
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139733932
    reference: chr 9
allele count: 1
allele frequency: 8.998632207904399e-6
allele num: 111128
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1134C>T
  hgvsp: ENST00000435930.1:c.1134C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1412C>T
  hgvsp: ENSP00000433031.1:p.Ala471Val
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*130C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1752C>T
  hgvsp: ENST00000311502.7:c.1752C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-1005C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1755C>T
  hgvsp: ENST00000371663.4:c.1755C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1407C>T
  hgvsp: ENST00000371675.3:c.1407C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*130C>T
  variant of: http://identifiers.org/hgnc/24703
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6201
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4094
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23922
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10523
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1645
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12256
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 657
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1297
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 601
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 879
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ala471Val
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum

9-139733934-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139733934
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139733934
    reference: chr 9
allele count: 2
allele frequency: 1.80446786242737e-5
allele num: 110836
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*132G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1754G>A
  hgvsp: ENSP00000311134.7:p.Arg585Lys
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1414G>A
  hgvsp: ENSP00000433031.1:p.Gly472Arg
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1136G>A
  hgvsp: ENSP00000408442.1:p.Arg379Lys
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*132G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1757G>A
  hgvsp: ENSP00000360727.4:p.Arg586Lys
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1409G>A
  hgvsp: ENSP00000360740.3:p.Arg470Lys
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-1003G>A
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4233
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23447
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11918
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10947
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1592
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6489
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 785
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9620
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4039
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg586Lys
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

9-139733936-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139733936
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139733936
    reference: chr 9
allele count: 8
allele frequency: 7.248609173114908e-5
allele num: 110366
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1759G>A
  hgvsp: ENSP00000360727.4:p.Ala587Thr
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1138G>A
  hgvsp: ENSP00000408442.1:p.Ala380Thr
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1416G>A
  hgvsp: ENST00000484471.2:c.1416G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*134G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1411G>A
  hgvsp: ENSP00000360740.3:p.Ala471Thr
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1756G>A
  hgvsp: ENSP00000311134.7:p.Ala586Thr
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-1001G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*134G>A
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4416
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11320
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11648
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7136
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22558
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3566
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1069
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1066
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 774
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala587Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ

9-139733937-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139733937
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139733937
    reference: chr 9
allele count: 32
allele frequency: 2.906976744186046e-4
allele num: 110080
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1417C>T
  hgvsp: ENSP00000433031.1:p.Arg473Trp
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1412C>T
  hgvsp: ENSP00000360740.3:p.Ala471Val
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*135C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-1000C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*135C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1757C>T
  hgvsp: ENSP00000311134.7:p.Ala586Val
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1139C>T
  hgvsp: ENSP00000408442.1:p.Ala380Val
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1760C>T
  hgvsp: ENSP00000360727.4:p.Ala587Val
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11344
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1574
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22503
  bin: 2.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 7089
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11651
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4426
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1459
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4324
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 759
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 586
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1526
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala587Val
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum

9-139733938-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139733938
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139733938
    reference: chr 9
allele count: 2
allele frequency: 1.821294576184752e-5
allele num: 109812
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1140G>A
  hgvsp: ENST00000435930.1:c.1140G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1758G>A
  hgvsp: ENST00000311502.7:c.1758G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*136G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1413G>A
  hgvsp: ENST00000371675.3:c.1413G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1418G>A
  hgvsp: ENSP00000433031.1:p.Arg473Gln
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*136G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-999G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1761G>A
  hgvsp: ENST00000371663.4:c.1761G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11088
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11977
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4538
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7320
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22062
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 751
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10393
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3084
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1595
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg473Gln
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: DP

9-139733940-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139733940
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139733941
    reference: chr 9
allele count: 2
allele frequency: 1.820101197626588e-5
allele num: 109884
alternate allele: TA
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1761+4dupA
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1140+4dupA
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-995dupA
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1758+4dupA
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1418+4dupA
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1413+4dupA
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*136+4dupA
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*136+4dupA
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10986
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4634
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7229
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1472
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22073
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12184
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 614
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10595
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 573
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 741
  bin: 7.5e0
  variant carriers: 0
hgvs: c.1761+4dupA
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: MQRankSum

9-139733945-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139733945
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139733945
    reference: chr 9
allele count: 51
allele frequency: 4.706186328067326e-4
allele num: 108368
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1761+7C>G
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1413+7C>G
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1418+7C>G
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1140+7C>G
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*136+7C>G
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1758+7C>G
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*136+7C>G
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-992C>G
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9901
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4980
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13548
  bin: 1.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 19716
  bin: 2.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 8770
  bin: 1.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 967
  bin: 9.75e1
  variant carriers: 48
genotype quality: GenotypeQuality
  all individuals: 1355
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1690
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1783
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4200
  bin: 2.75e1
  variant carriers: 0
hgvs: c.1761+7C>G
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum

9-139733945-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139733945
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139733945
    reference: chr 9
allele count: 41
allele frequency: 3.783404695112949e-4
allele num: 108368
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1140+7C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1758+7C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1418+7C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*136+7C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1761+7C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-992C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1413+7C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*136+7C>T
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8770
  bin: 1.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 13548
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9901
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19716
  bin: 2.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 4980
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 967
  bin: 9.75e1
  variant carriers: 39
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1690
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4200
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 707
  bin: 7.25e1
  variant carriers: 0
hgvs: c.1761+7C>T
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum

9-139733946-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139733946
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139733946
    reference: chr 9
allele count: 23
allele frequency: 2.120675665707752e-4
allele num: 108456
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1140+8G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*136+8G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*136+8G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1758+8G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1413+8G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1761+8G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1418+8G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-991G>A
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8628
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5027
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1480
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9867
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 19782
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13612
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 710
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2870
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 910
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1609
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1617
  bin: 4.75e1
  variant carriers: 0
hgvs: c.1761+8G>A
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff

9-139733951-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139733951
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139733951
    reference: chr 9
allele count: 1
allele frequency: 9.284878646636088e-6
allele num: 107702
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*136+13C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-986C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*136+13C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1761+13C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1758+13C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1418+13C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1413+13C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1140+13C>T
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5308
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18791
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9414
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1418
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14093
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9302
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1489
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1732
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11623
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 619
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22064
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4068
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS

9-139733954-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139733954
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139733954
    reference: chr 9
allele count: 1
allele frequency: 9.342651070667812e-6
allele num: 107036
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-983C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1758+16C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*136+16C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1413+16C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1761+16C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1418+16C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*136+16C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1140+16C>T
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1442
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9115
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18156
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5463
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14353
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9708
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 750
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1825
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 532
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 554
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21019
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1117
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1465
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 882
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum

9-139733955-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139733955
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139733955
    reference: chr 9
allele count: 8
allele frequency: 7.50835304276007e-5
allele num: 106548
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1140+17C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1418+17C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1413+17C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1761+17C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-982C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*136+17C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1758+17C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*136+17C>T
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9855
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17887
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5522
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9047
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14418
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2744
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 548
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1611
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4510
  bin: 2.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: East Asian
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

9-139733956-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139733956
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139733956
    reference: chr 9
allele count: 12
allele frequency: 1.126422107911238e-4
allele num: 106532
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*136+18G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1761+18G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1140+18G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*136+18G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1758+18G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-981G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1418+18G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1413+18G>A
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1434
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14521
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17838
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8911
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5593
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9865
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4538
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1276
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 523
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11833
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: QD

9-139733959-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139733959
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139733959
    reference: chr 9
allele count: 2
allele frequency: 1.887362222557753e-5
allele num: 105968
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-978G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*136+21G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1761+21G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1413+21G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1140+21G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1418+21G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*136+21G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1758+21G>A
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5733
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8345
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1388
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16942
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14741
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10826
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2009
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4690
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6173
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1347
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 551
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

9-139733960-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139733960
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139733960
    reference: chr 9
allele count: 1
allele frequency: 9.436811112788767e-6
allele num: 105968
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1140+22C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-977C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1418+22C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1413+22C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1758+22C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*136+22C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*136+22C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1761+22C>T
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17060
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10703
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5769
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14736
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8358
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1745
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 768
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1353
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 727
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1946
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4705
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

9-139734097-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734097
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734097
    reference: chr 9
allele count: 1
allele frequency: 9.149465671204801e-6
allele num: 109296
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1419-49G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*137-49G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1141-49G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*137-49G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1414-49G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1759-49G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1762-49G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-840G>A
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28567
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3302
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1923
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2319
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10831
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10532
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1020
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1848
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 844
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum

9-139734098-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734098
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734098
    reference: chr 9
allele count: 1
allele frequency: 9.149130832570906e-6
allele num: 109300
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*137-48G>C
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1414-48G>C
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-839G>C
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1419-48G>C
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1762-48G>C
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1141-48G>C
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*137-48G>C
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1759-48G>C
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2320
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10530
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3300
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28588
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10842
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1919
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38703
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2464
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 490
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 872
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1244
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: African
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP

9-139734099-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734099
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734099
    reference: chr 9
allele count: 1
allele frequency: 9.150302875025163e-6
allele num: 109286
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-838G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1759-47G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1419-47G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1414-47G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1141-47G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*137-47G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*137-47G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1762-47G>A
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10846
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10533
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28595
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2330
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3300
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1242
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 850
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 869
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

9-139734100-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734100
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734100
    reference: chr 9
allele count: 1
allele frequency: 9.149800534348351e-6
allele num: 109292
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1414-46G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*137-46G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1762-46G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1419-46G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*137-46G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1141-46G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1759-46G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-837G>A
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28607
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10855
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10537
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3300
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2335
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1096
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2485
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: European (Finnish)
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum

9-139734109-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734109
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734109
    reference: chr 9
allele count: 1
allele frequency: 9.146453005524458e-6
allele num: 109332
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*137-37G>C
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1141-37G>C
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-828G>C
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*137-37G>C
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1419-37G>C
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1759-37G>C
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1762-37G>C
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1414-37G>C
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2436
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10553
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3230
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28704
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10954
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2097
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2681
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8388
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1833
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1227
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum

9-139734109-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734109
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734109
    reference: chr 9
allele count: 1
allele frequency: 9.146453005524458e-6
allele num: 109332
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-828G>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1414-37G>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1762-37G>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*137-37G>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1419-37G>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1141-37G>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1759-37G>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*137-37G>T
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10553
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10954
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3230
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28704
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2436
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39082
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 725
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2097
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1227
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: African
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff

9-139734110-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734110
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734110
    reference: chr 9
allele count: 1
allele frequency: 9.145281949042489e-6
allele num: 109346
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1419-36G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*137-36G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1762-36G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1414-36G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1759-36G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*137-36G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-827G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1141-36G>A
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10553
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3208
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2466
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28710
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10967
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 488
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 708
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1642
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2674
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39102
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff

9-139734114-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734114
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734114
    reference: chr 9
allele count: 1
allele frequency: 9.143609531298575e-6
allele num: 109366
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1762-32G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1759-32G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*137-32G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*137-32G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1414-32G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1141-32G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1419-32G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-823G>A
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2606
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3078
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1915
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10561
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28722
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10990
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1226
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2098
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 859
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2627
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39136
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: QD

9-139734114-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734114
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734114
    reference: chr 9
allele count: 1
allele frequency: 9.143609531298575e-6
allele num: 109366
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-823G>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1414-32G>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*137-32G>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1762-32G>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1419-32G>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*137-32G>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1759-32G>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1141-32G>T
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3078
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1915
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10990
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2606
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28722
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10561
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8408
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 859
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: QD

9-139734116-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734116
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734116
    reference: chr 9
allele count: 1
allele frequency: 9.14277355178467e-6
allele num: 109376
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*137-30T>C
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-821T>C
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1419-30T>C
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*137-30T>C
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1141-30T>C
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1414-30T>C
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1762-30T>C
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1759-30T>C
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3018
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11011
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28730
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2664
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10559
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39153
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 858
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
reference allele: T
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

9-139734118-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734118
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734118
    reference: chr 9
allele count: 1
allele frequency: 9.140767824497258e-6
allele num: 109400
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1762-28G>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*137-28G>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1419-28G>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*137-28G>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1141-28G>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1414-28G>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1759-28G>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-819G>T
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2712
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2958
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11014
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28740
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10560
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2017
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8413
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: MQ

9-139734119-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734119
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734119
    reference: chr 9
allele count: 2
allele frequency: 1.828153564899452e-5
allele num: 109400
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*137-27C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-818C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1759-27C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1414-27C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1762-27C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1141-27C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1419-27C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*137-27C>T
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28749
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2773
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11015
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2882
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10559
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39177
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8417
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 546
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2098
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP

9-139734122-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734122
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734122
    reference: chr 9
allele count: 1
allele frequency: 9.132753707898006e-6
allele num: 109496
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1414-24G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*137-24G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1419-24G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1141-24G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1762-24G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1759-24G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*137-24G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-815G>A
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11034
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1912
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2927
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2710
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10563
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28755
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8415
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39207
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

9-139734122-G-GA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734122
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734123
    reference: chr 9
allele count: 1
allele frequency: 9.132753707898006e-6
allele num: 109496
alternate allele: GA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1141-23dupA
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*137-23dupA
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-814dupA
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1762-23dupA
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*137-23dupA
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1414-23dupA
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1759-23dupA
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1419-23dupA
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11034
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10563
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2710
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2927
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28755
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1912
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2294
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1834
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2419
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum

9-139734122-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734122
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734122
    reference: chr 9
allele count: 1
allele frequency: 9.132753707898006e-6
allele num: 109496
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1759-24G>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-815G>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1141-24G>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1414-24G>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1762-24G>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*137-24G>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*137-24G>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1419-24G>T
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2927
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11034
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28755
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10563
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1912
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2710
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1834
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2294
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39207
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8415
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum

9-139734130-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734130
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734130
    reference: chr 9
allele count: 2
allele frequency: 1.823652776511352e-5
allele num: 109670
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*137-16G>C
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1414-16G>C
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*137-16G>C
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1141-16G>C
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1762-16G>C
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1759-16G>C
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-807G>C
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1419-16G>C
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28780
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11065
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1912
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2285
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10566
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3271
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 863
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2092
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1832
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2587
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff

9-139734131-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734131
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734131
    reference: chr 9
allele count: 1
allele frequency: 9.116767558894318e-6
allele num: 109688
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1759-15C>G
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*137-15C>G
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1141-15C>G
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1762-15C>G
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*137-15C>G
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-806C>G
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1414-15C>G
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1419-15C>G
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11078
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3304
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1911
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10565
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28777
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2229
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2636
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2093
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8429
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 431
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

9-139734135-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734135
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734135
    reference: chr 9
allele count: 24
allele frequency: 2.184081684655006e-4
allele num: 109886
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1141-11C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-802C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*137-11C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1414-11C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1419-11C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1759-11C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*137-11C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1762-11C>T
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3464
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28783
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11115
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1911
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1999
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10565
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39323
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8435
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1847
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2092
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2978
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: BaseQRankSum

9-139734145-GGATGACTTTCCCGTGCGA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734145
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734127
    reference: chr 9
allele count: 1
allele frequency: 9.056658455296334e-6
allele num: 110416
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  consequence: splice_region_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsp: ENSP00000360727.4:p.Phe590_Asp595del
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsp: ENSP00000433031.1:p.Phe476_Thr481del
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: splice_region_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsp: ENSP00000408442.1:p.Phe383_Asp388del
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: splice_region_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsp: ENSP00000360740.3:p.Phe474_Asp479del
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: splice_region_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsp: ENSP00000311134.7:p.Phe589_Asp594del
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 28816
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10572
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11203
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1912
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3813
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2096
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39441
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1837
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1317
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Phe590_Asp595del
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: GGATGACTTTCCCGTGCGA
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

9-139734146-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734146
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734146
    reference: chr 9
allele count: 1
allele frequency: 9.050920478612675e-6
allele num: 110486
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1759G>A
  hgvsp: ENSP00000311134.7:p.Asp587Asn
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1419G>A
  hgvsp: ENST00000484471.2:c.1419G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1141G>A
  hgvsp: ENSP00000408442.1:p.Asp381Asn
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1414G>A
  hgvsp: ENSP00000360740.3:p.Asp472Asn
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*137G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1762G>A
  hgvsp: ENSP00000360727.4:p.Asp588Asn
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*137G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-791G>A
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10573
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1912
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28814
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11211
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3839
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3557
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1267
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asp588Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: African
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

9-139734151-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734151
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734151
    reference: chr 9
allele count: 7
allele frequency: 6.324882086126823e-5
allele num: 110674
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-786C>G
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1146C>G
  hgvsp: ENSP00000408442.1:p.Asp382Glu
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1419C>G
  hgvsp: ENSP00000360740.3:p.Asp473Glu
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*142C>G
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1424C>G
  hgvsp: ENSP00000433031.1:p.Thr475Ser
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1764C>G
  hgvsp: ENSP00000311134.7:p.Asp588Glu
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*142C>G
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1767C>G
  hgvsp: ENSP00000360727.4:p.Asp589Glu
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3893
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11233
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10576
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28824
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3578
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1835
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8431
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Asp589Glu
num of homozygotes: 1
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ

9-139734156-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734156
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734156
    reference: chr 9
allele count: 6
allele frequency: 5.406379527842855e-5
allele num: 110980
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*147C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1429C>T
  hgvsp: ENSP00000433031.1:p.Pro477Ser
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1769C>T
  hgvsp: ENSP00000311134.7:p.Pro590Leu
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*147C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-781C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1772C>T
  hgvsp: ENSP00000360727.4:p.Pro591Leu
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1151C>T
  hgvsp: ENSP00000408442.1:p.Pro384Leu
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1424C>T
  hgvsp: ENSP00000360740.3:p.Pro475Leu
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1911
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3940
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28849
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11273
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10576
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2095
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8444
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 932
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro591Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: African
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ

9-139734157-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734157
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734157
    reference: chr 9
allele count: 6
allele frequency: 5.402971634398919e-5
allele num: 111050
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1152C>T
  hgvsp: ENST00000435930.1:c.1152C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1430C>T
  hgvsp: ENSP00000433031.1:p.Pro477Leu
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-780C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1770C>T
  hgvsp: ENST00000311502.7:c.1770C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1425C>T
  hgvsp: ENST00000371675.3:c.1425C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1773C>T
  hgvsp: ENST00000371663.4:c.1773C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*148C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*148C>T
  variant of: http://identifiers.org/hgnc/24703
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3925
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28856
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11298
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10574
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 860
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3790
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro477Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

9-139734158-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734158
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734158
    reference: chr 9
allele count: 5
allele frequency: 4.493412657044773e-5
allele num: 111274
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*149G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1431G>A
  hgvsp: ENST00000484471.2:c.1431G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*149G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1426G>A
  hgvsp: ENSP00000360740.3:p.Val476Met
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1774G>A
  hgvsp: ENSP00000360727.4:p.Val592Met
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1771G>A
  hgvsp: ENSP00000311134.7:p.Val591Met
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1153G>A
  hgvsp: ENSP00000408442.1:p.Val385Met
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-779G>A
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1911
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28859
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11343
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3942
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10577
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39600
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 796
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3834
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Val592Met
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: DP

9-139734161-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734161
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734161
    reference: chr 9
allele count: 1
allele frequency: 8.97488826264113e-6
allele num: 111422
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1156C>T
  hgvsp: ENSP00000408442.1:p.Arg386Ter
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1429C>T
  hgvsp: ENSP00000360740.3:p.Arg477Ter
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*152C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1777C>T
  hgvsp: ENSP00000360727.4:p.Arg593Ter
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1434C>T
  hgvsp: ENST00000484471.2:c.1434C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1774C>T
  hgvsp: ENSP00000311134.7:p.Arg592Ter
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-776C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*152C>T
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11376
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28879
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3877
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10579
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1911
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8443
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3793
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg593Ter
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

9-139734162-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734162
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734162
    reference: chr 9
allele count: 4
allele frequency: 3.578521712680492e-5
allele num: 111778
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-775G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*153G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*153G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1430G>A
  hgvsp: ENSP00000360740.3:p.Arg477Gln
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1775G>A
  hgvsp: ENSP00000311134.7:p.Arg592Gln
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1435G>A
  hgvsp: ENSP00000433031.1:p.Glu479Lys
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1157G>A
  hgvsp: ENSP00000408442.1:p.Arg386Gln
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1778G>A
  hgvsp: ENSP00000360727.4:p.Arg593Gln
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11471
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10580
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1911
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28881
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3860
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 863
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3881
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 631
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg593Gln
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: QD

9-139734168-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734168
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734168
    reference: chr 9
allele count: 1
allele frequency: 8.903926631644555e-6
allele num: 112310
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1436A>G
  hgvsp: ENSP00000360740.3:p.Asp479Gly
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1781A>G
  hgvsp: ENSP00000311134.7:p.Asp594Gly
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1441A>G
  hgvsp: ENSP00000433031.1:p.Thr481Ala
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*159A>G
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-769A>G
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*159A>G
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1163A>G
  hgvsp: ENSP00000408442.1:p.Asp388Gly
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1784A>G
  hgvsp: ENSP00000360727.4:p.Asp595Gly
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10575
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28901
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11641
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3668
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8459
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3715
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1836
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asp595Gly
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: East Asian
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum

9-139734170-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734170
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734170
    reference: chr 9
allele count: 1
allele frequency: 8.880994671403197e-6
allele num: 112600
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1443C>T
  hgvsp: ENST00000484471.2:c.1443C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1165C>T
  hgvsp: ENSP00000408442.1:p.Pro389Ser
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1438C>T
  hgvsp: ENSP00000360740.3:p.Pro480Ser
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1786C>T
  hgvsp: ENSP00000360727.4:p.Pro596Ser
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*161C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-767C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1783C>T
  hgvsp: ENSP00000311134.7:p.Pro595Ser
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*161C>T
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3534
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1908
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28922
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11748
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10581
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 858
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro596Ser
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: ReadPosRankSum

9-139734171-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734171
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734171
    reference: chr 9
allele count: 3
allele frequency: 2.660281989890928e-5
allele num: 112770
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1444C>T
  hgvsp: ENSP00000433031.1:p.Pro482Ser
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-766C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1439C>T
  hgvsp: ENSP00000360740.3:p.Pro480Leu
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1787C>T
  hgvsp: ENSP00000360727.4:p.Pro596Leu
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1784C>T
  hgvsp: ENSP00000311134.7:p.Pro595Leu
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*162C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*162C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1166C>T
  hgvsp: ENSP00000408442.1:p.Pro389Leu
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10585
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3490
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1907
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11798
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28927
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 476
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39992
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8490
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3563
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro596Leu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ

9-139734175-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734175
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734175
    reference: chr 9
allele count: 6
allele frequency: 5.29829394934831e-5
allele num: 113244
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1448C>T
  hgvsp: ENSP00000433031.1:p.Pro483Leu
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1788C>T
  hgvsp: ENST00000311502.7:c.1788C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*166C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1170C>T
  hgvsp: ENST00000435930.1:c.1170C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1791C>T
  hgvsp: ENST00000371663.4:c.1791C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*166C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-762C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1443C>T
  hgvsp: ENST00000371675.3:c.1443C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3259
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11958
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28958
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10589
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 342
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3383
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40161
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1133
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 860
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro483Leu
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: DP

9-139734176-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734176
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734176
    reference: chr 9
allele count: 70
allele frequency: 6.162405803225579e-4
allele num: 113592
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*167G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1449G>A
  hgvsp: ENST00000484471.2:c.1449G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1444G>A
  hgvsp: ENSP00000360740.3:p.Asp482Asn
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1171G>A
  hgvsp: ENSP00000408442.1:p.Asp391Asn
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1789G>A
  hgvsp: ENSP00000311134.7:p.Asp597Asn
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*167G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1792G>A
  hgvsp: ENSP00000360727.4:p.Asp598Asn
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-761G>A
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3182
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12083
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.75e1
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1908
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28974
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10589
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8512
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1132
  bin: 9.75e1
  variant carriers: 69
genotype quality: GenotypeQuality
  all individuals: 1844
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2112
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asp598Asn
num of homozygotes: 1
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

9-139734178-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734178
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734178
    reference: chr 9
allele count: 2
allele frequency: 1.754970955230691e-5
allele num: 113962
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1446T>C
  hgvsp: ENST00000371675.3:c.1446T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*169T>C
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1451T>C
  hgvsp: ENSP00000433031.1:p.Met484Thr
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1791T>C
  hgvsp: ENST00000311502.7:c.1791T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1173T>C
  hgvsp: ENST00000435930.1:c.1173T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-759T>C
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1794T>C
  hgvsp: ENST00000371663.4:c.1794T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*169T>C
  variant of: http://identifiers.org/hgnc/24703
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3033
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1909
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10597
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29038
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12275
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8538
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1064
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3189
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Met484Thr
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

9-139734179-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734179
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734179
    reference: chr 9
allele count: 1
allele frequency: 8.765163733258537e-6
allele num: 114088
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1447G>A
  hgvsp: ENSP00000360740.3:p.Val483Met
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.1452G>A
  hgvsp: ENSP00000433031.1:p.Met484Ile
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*170G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1792G>A
  hgvsp: ENSP00000311134.7:p.Val598Met
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1174G>A
  hgvsp: ENSP00000408442.1:p.Val392Met
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*170G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-758G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1795G>A
  hgvsp: ENSP00000360727.4:p.Val599Met
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2976
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12331
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10599
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29044
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1849
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8539
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3139
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val599Met
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum

9-139734187-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734187
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734187
    reference: chr 9
allele count: 2
allele frequency: 1.741826479246138e-5
allele num: 114822
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*178C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1800C>T
  hgvsp: ENST00000311502.7:c.1800C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.*5C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1803C>T
  hgvsp: ENST00000371663.4:c.1803C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1455C>T
  hgvsp: ENST00000371675.3:c.1455C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1182C>T
  hgvsp: ENST00000435930.1:c.1182C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*178C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-750C>T
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10577
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12635
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29097
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40692
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asp601Asp
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP

9-139734188-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734188
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734188
    reference: chr 9
allele count: 2
allele frequency: 1.736804626847526e-5
allele num: 115154
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1456G>A
  hgvsp: ENSP00000360740.3:p.Glu486Lys
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1804G>A
  hgvsp: ENSP00000360727.4:p.Glu602Lys
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*179G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.*6G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1183G>A
  hgvsp: ENSP00000408442.1:p.Glu395Lys
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1801G>A
  hgvsp: ENSP00000311134.7:p.Glu601Lys
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-749G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*179G>A
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29095
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10548
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12817
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2442
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1880
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2694
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Glu602Lys
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD

9-139734188-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734188
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734188
    reference: chr 9
allele count: 7
allele frequency: 6.078816193966341e-5
allele num: 115154
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1456G>C
  hgvsp: ENSP00000360740.3:p.Glu486Gln
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*179G>C
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1804G>C
  hgvsp: ENSP00000360727.4:p.Glu602Gln
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.*6G>C
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1801G>C
  hgvsp: ENSP00000311134.7:p.Glu601Gln
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1183G>C
  hgvsp: ENSP00000408442.1:p.Glu395Gln
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-749G>C
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*179G>C
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29095
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10548
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2442
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12817
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1880
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1865
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Glu602Gln
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ

9-139734194-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734194
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734194
    reference: chr 9
allele count: 2
allele frequency: 1.728011059270779e-5
allele num: 115740
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-743G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.*12G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1810G>A
  hgvsp: ENSP00000360727.4:p.Glu604Lys
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1807G>A
  hgvsp: ENSP00000311134.7:p.Glu603Lys
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1189G>A
  hgvsp: ENSP00000408442.1:p.Glu397Lys
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*185G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*185G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1462G>A
  hgvsp: ENSP00000360740.3:p.Glu488Lys
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29158
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2157
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13214
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1820
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10467
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1052
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2456
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Glu604Lys
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum

9-139734197-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734197
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734197
    reference: chr 9
allele count: 1
allele frequency: 8.62217623728229e-6
allele num: 115980
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-740G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1810G>A
  hgvsp: ENSP00000311134.7:p.Gly604Ser
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1192G>A
  hgvsp: ENSP00000408442.1:p.Gly398Ser
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*188G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1465G>A
  hgvsp: ENSP00000360740.3:p.Gly489Ser
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*188G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.*15G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1813G>A
  hgvsp: ENSP00000360727.4:p.Gly605Ser
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13308
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29177
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10455
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2023
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2080
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1060
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40913
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gly605Ser
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

9-139734205-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734205
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734205
    reference: chr 9
allele count: 6
allele frequency: 5.134348793428033e-5
allele num: 116860
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.*23C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1818C>T
  hgvsp: ENST00000311502.7:c.1818C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*196C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1473C>T
  hgvsp: ENST00000371675.3:c.1473C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1200C>T
  hgvsp: ENST00000435930.1:c.1200C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*196C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-732C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1821C>T
  hgvsp: ENST00000371663.4:c.1821C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29853
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13735
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1553
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10452
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 822
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8463
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2066
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41836
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ala607Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

9-139734206-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734206
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734206
    reference: chr 9
allele count: 10
allele frequency: 8.536356341659126e-5
allele num: 117146
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1201G>A
  hgvsp: ENSP00000408442.1:p.Glu401Lys
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*197G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1474G>A
  hgvsp: ENSP00000360740.3:p.Glu492Lys
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.*24G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1819G>A
  hgvsp: ENSP00000311134.7:p.Glu607Lys
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1822G>A
  hgvsp: ENSP00000360727.4:p.Glu608Lys
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-731G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*197G>A
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10461
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29963
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1620
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 13867
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1802
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2079
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Glu608Lys
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
reference allele: G
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum

9-139734210-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734210
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734210
    reference: chr 9
allele count: 1
allele frequency: 8.513101663460065e-6
allele num: 117466
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-727C>G
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*201C>G
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1205C>G
  hgvsp: ENSP00000408442.1:p.Pro402Arg
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*201C>G
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1478C>G
  hgvsp: ENSP00000360740.3:p.Pro493Arg
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1823C>G
  hgvsp: ENSP00000311134.7:p.Pro608Arg
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1826C>G
  hgvsp: ENSP00000360727.4:p.Pro609Arg
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.*28C>G
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10459
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13988
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30119
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8531
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1812
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 865
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Pro609Arg
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: DP

9-139734210-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734210
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734210
    reference: chr 9
allele count: 4
allele frequency: 3.405240665384026e-5
allele num: 117466
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-727C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*201C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1826C>T
  hgvsp: ENSP00000360727.4:p.Pro609Leu
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1478C>T
  hgvsp: ENSP00000360740.3:p.Pro493Leu
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1823C>T
  hgvsp: ENSP00000311134.7:p.Pro608Leu
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.*28C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*201C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1205C>T
  hgvsp: ENSP00000408442.1:p.Pro402Leu
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30119
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13988
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10459
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8531
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2074
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro609Leu
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD

9-139734211-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734211
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734211
    reference: chr 9
allele count: 93
allele frequency: 7.902787219578518e-4
allele num: 117680
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1827G>A
  hgvsp: ENST00000371663.4:c.1827G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*202G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1479G>A
  hgvsp: ENST00000371675.3:c.1479G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1824G>A
  hgvsp: ENST00000311502.7:c.1824G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.*29G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1206G>A
  hgvsp: ENST00000435930.1:c.1206G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*202G>A
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-726G>A
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 14096
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10467
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30166
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 42678
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8541
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2069
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Pro609Pro
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

9-139734218-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734218
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734218
    reference: chr 9
allele count: 6
allele frequency: 5.069794166356846e-5
allele num: 118348
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.*36C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1213C>T
  hgvsp: ENSP00000408442.1:p.Pro405Ser
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1831C>T
  hgvsp: ENSP00000311134.7:p.Pro611Ser
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-719C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1834C>T
  hgvsp: ENSP00000360727.4:p.Pro612Ser
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*209C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*209C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1486C>T
  hgvsp: ENSP00000360740.3:p.Pro496Ser
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10499
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30518
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14402
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1068
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43306
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 823
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Pro612Ser
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

9-139734219-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734219
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734219
    reference: chr 9
allele count: 2
allele frequency: 1.688932425813643e-5
allele num: 118418
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-718C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*210C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1487C>T
  hgvsp: ENSP00000360740.3:p.Pro496Leu
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1835C>T
  hgvsp: ENSP00000360727.4:p.Pro612Leu
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1832C>T
  hgvsp: ENSP00000311134.7:p.Pro611Leu
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*210C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1214C>T
  hgvsp: ENSP00000408442.1:p.Pro405Leu
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.*37C>T
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10495
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14409
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1596
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30553
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2072
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 751
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43250
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8604
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Pro612Leu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: European (Finnish)
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD

9-139734220-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734220
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734220
    reference: chr 9
allele count: 1
allele frequency: 8.435117079425063e-6
allele num: 118552
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*211C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-717C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.*38C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1215C>T
  hgvsp: ENST00000435930.1:c.1215C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*211C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1833C>T
  hgvsp: ENST00000311502.7:c.1833C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1836C>T
  hgvsp: ENST00000371663.4:c.1836C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1488C>T
  hgvsp: ENST00000371675.3:c.1488C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14459
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10487
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30598
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1592
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43480
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro612Pro
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

9-139734221-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 139734221
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 139734221
    reference: chr 9
allele count: 4
allele frequency: 3.37251066556498e-5
allele num: 118606
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000414081
  ensembl transcript: ENST00000432842
  gene symbol: RABL6
  hgvsc: ENST00000432842.2:c.*212C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000408442
  ensembl transcript: ENST00000435930
  gene symbol: RABL6
  hgvsc: ENST00000435930.1:c.1216C>T
  hgvsp: ENSP00000408442.1:p.Pro406Ser
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360740
  ensembl transcript: ENST00000371675
  gene symbol: RABL6
  hgvsc: ENST00000371675.3:c.1489C>T
  hgvsp: ENSP00000360740.3:p.Pro497Ser
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000360727
  ensembl transcript: ENST00000371663
  gene symbol: RABL6
  hgvsc: ENST00000371663.4:c.1837C>T
  hgvsp: ENSP00000360727.4:p.Pro613Ser
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000433031
  ensembl transcript: ENST00000484471
  gene symbol: RABL6
  hgvsc: ENST00000484471.2:c.*39C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000311134
  ensembl transcript: ENST00000311502
  gene symbol: RABL6
  hgvsc: ENST00000311502.7:c.1834C>T
  hgvsp: ENSP00000311134.7:p.Pro612Ser
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000350056
  ensembl transcript: ENST00000357466
  gene symbol: RABL6
  hgvsc: ENST00000357466.2:c.1080-716C>T
  variant of: http://identifiers.org/hgnc/24703
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000196642
  ensembl protein: ENSP00000431675
  ensembl transcript: ENST00000464941
  gene symbol: RABL6
  hgvsc: ENST00000464941.1:c.*212C>T
  variant of: http://identifiers.org/hgnc/24703
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1590
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14514
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30625
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10487
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro613Ser
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 38621
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 880
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1358
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 663
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2087
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 556
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1808
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1171
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 719
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 946
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3953
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 883
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 302
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63190
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.108647450110865e-4
allele num: 9020
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15784
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8342
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5970
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10988
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.85e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.328594e6

MQRankSum
type: SiteQuality
SIO_000300: -6.0e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 7.43e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.88e-1

QD
type: SiteQuality
SIO_000300: 1.349e1

GenotypeQuality
all individuals: 5998
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3834
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2280
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1466
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 663
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 684
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 915
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1983
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37809
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8326
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8990
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5952
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.826150474799123e-4
allele num: 10952
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62978
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.152e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.071e0

DP
type: SiteQuality
SIO_000300: 1.31968e6

QD
type: SiteQuality
SIO_000300: 1.029e1

VQSLOD
type: SiteQuality
SIO_000300: 5.84e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.0e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.01e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -5.97e-1

GenotypeQuality
all individuals: 2020
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37640
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 920
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 580
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 804
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 792
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 891
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 1467
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3845
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 610
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9000
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5952
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8300
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10944
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.848620910840282e-4
allele num: 15590
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.177932437156386e-5
allele num: 62934
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -3.54e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.51e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.13e-1

DP
type: SiteQuality
SIO_000300: 1.316181e6

VQSLOD
type: SiteQuality
SIO_000300: -9.302e-1

QD
type: SiteQuality
SIO_000300: 2.248e1

GenotypeQuality
all individuals: 2383
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6392
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 729
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2032
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 668
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 710
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 908
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 501
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38148
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9014
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62898
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.43915003219575e-5
allele num: 15530
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5950
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10942
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8324
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.239e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.204e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.28e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.45e-1

DP
type: SiteQuality
SIO_000300: 1.31137e6

QD
type: SiteQuality
SIO_000300: 6.47e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.8e-2

GenotypeQuality
all individuals: 958
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2957
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 649
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 880
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7433
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2517
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1175
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1861
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 880
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3659
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10916
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62588
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.115075825156111e-4
allele num: 8968
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 824
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8300
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15198
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5932
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.379999999999999e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.284763e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.72e-1

QD
type: SiteQuality
SIO_000300: 2.8e0

VQSLOD
type: SiteQuality
SIO_000300: -2.776e0

MQRankSum
type: SiteQuality
SIO_000300: -2.12e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.5e-1

GenotypeQuality
all individuals: 3384
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1077
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3712
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2440
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1266
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3095
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30342
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8896
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 933
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 881
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 613
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5886
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10862
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8286
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.610098538030527e-5
allele num: 62108
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8914
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.52e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.580000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.771e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.043e0

QD
type: SiteQuality
SIO_000300: 1.476e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.244511e6

VQSLOD
type: SiteQuality
SIO_000300: -8.793e-1

GenotypeQuality
all individuals: 814
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1402
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30826
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 601
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3345
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2421
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 885
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 657
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3701
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10846
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5880
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14568
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.228501228501228e-3
allele num: 814
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8274
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.445167735490316e-5
allele num: 62062
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.77e-1

QD
type: SiteQuality
SIO_000300: 1.271e1

MQ
type: SiteQuality
SIO_000300: 5.985e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.74e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.5e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.66e0

FS
type: SiteQuality
SIO_000300: 3.494e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.56e-1

DP
type: SiteQuality
SIO_000300: 1.244968e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

GenotypeQuality
all individuals: 657
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8925
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 720
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 939
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3345
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3095
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2421
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1402
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 885
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 190
bin: 1.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10846
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5880
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14568
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.208605269518975e-4
allele num: 8274
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62062
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.74e-1

MQ
type: SiteQuality
SIO_000300: 5.985e1

DP
type: SiteQuality
SIO_000300: 1.244968e6

FS
type: SiteQuality
SIO_000300: 3.494e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.77e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.56e-1

QD
type: SiteQuality
SIO_000300: 1.271e1

MQRankSum
type: SiteQuality
SIO_000300: 9.5e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.66e0

GenotypeQuality
all individuals: 30519
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 609
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variant carriers: 1

GenotypeQuality
all individuals: 910
bin: 9.75e1
variant carriers: 33

Latino
type: Population
allele count: 8
allele frequency: 7.384160974709249e-4
allele num: 10834
num of homozygotes: 0

South Asian
type: Population
allele count: 24
allele frequency: 1.658145640458754e-3
allele num: 14474
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.229765519023319e-5
allele num: 61924
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5866
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.251745102454402e-4
allele num: 8882
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 810
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8248
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 8.799999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.49e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.22e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.06e-1

QD
type: SiteQuality
SIO_000300: 1.088e1

FS
type: SiteQuality
SIO_000300: 1.127e0

VQSLOD
type: SiteQuality
SIO_000300: 3.12e0

DP
type: SiteQuality
SIO_000300: 1.241463e6

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3338
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62008
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8266
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10848
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.12410071942446e-4
allele num: 8896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14408
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 812
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.712e0

DP
type: SiteQuality
SIO_000300: 1.234298e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.98e-1

MQ
type: SiteQuality
SIO_000300: 5.472e1

QD
type: SiteQuality
SIO_000300: 7.75e0

FS
type: SiteQuality
SIO_000300: 1.519e0

MQRankSum
type: SiteQuality
SIO_000300: -1.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.183e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.31e-1

GenotypeQuality
all individuals: 674
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 29585
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GenotypeQuality
all individuals: 604
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14296
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8254
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8886
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10838
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5884
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.23258445126879e-5
allele num: 61870
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 1.1774e1

QD
type: SiteQuality
SIO_000300: 1.02e1

MQRankSum
type: SiteQuality
SIO_000300: -1.85e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.706e0

MQ
type: SiteQuality
SIO_000300: 5.943e1

DP
type: SiteQuality
SIO_000300: 1.224119e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.7e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.7e-1

GenotypeQuality
all individuals: 10141
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 270
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variant carriers: 0

GenotypeQuality
all individuals: 886
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variant carriers: 8

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 702
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GenotypeQuality
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GenotypeQuality
all individuals: 4354
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1647
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.134411564515606e-4
allele num: 61706
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10822
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.128668171557562e-4
allele num: 8860
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14070
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8240
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5862
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.56e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.908e0

QD
type: SiteQuality
SIO_000300: 1.359e1

DP
type: SiteQuality
SIO_000300: 1.206635e6

MQRankSum
type: SiteQuality
SIO_000300: 2.02e-1

FS
type: SiteQuality
SIO_000300: 7.484e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.31e-1

MQ
type: SiteQuality
SIO_000300: 5.988e1

GenotypeQuality
all individuals: 10149
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3553
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 904
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variant carriers: 28

GenotypeQuality
all individuals: 1085
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 96
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8212
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.622797053000552e-5
allele num: 61622
num of homozygotes: 0

African
type: Population
allele count: 29
allele frequency: 3.279059249208503e-3
allele num: 8844
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13950
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5844
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.851166234727879e-4
allele num: 10804
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.66e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.9e-2

QD
type: SiteQuality
SIO_000300: 1.179e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

DP
type: SiteQuality
SIO_000300: 1.207956e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.56e-1

FS
type: SiteQuality
SIO_000300: 5.3e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.6e-1

GenotypeQuality
all individuals: 4479
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 98
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 737
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GenotypeQuality
all individuals: 75
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GenotypeQuality
all individuals: 161
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 26515
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GenotypeQuality
all individuals: 882
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GenotypeQuality
all individuals: 259
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13872
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.252878797735996e-5
allele num: 61484
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5842
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8824
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10784
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 802
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8204
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.73e-1

QD
type: SiteQuality
SIO_000300: 8.58e0

MQRankSum
type: SiteQuality
SIO_000300: 3.14e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.24e-1

MQ
type: SiteQuality
SIO_000300: 5.882e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.06e-1

FS
type: SiteQuality
SIO_000300: 8.64e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.076e0

DP
type: SiteQuality
SIO_000300: 1.200228e6

GenotypeQuality
all individuals: 233
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3128
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5832
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.249179582155506e-5
allele num: 61554
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8834
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10800
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 802
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8216
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13846
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

QD
type: SiteQuality
SIO_000300: 6.5e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.47e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.174e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.29e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.16e0

DP
type: SiteQuality
SIO_000300: 1.194997e6

FS
type: SiteQuality
SIO_000300: 2.377e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.33e-1

GenotypeQuality
all individuals: 503
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GenotypeQuality
all individuals: 254
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 707
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GenotypeQuality
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GenotypeQuality
all individuals: 2860
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GenotypeQuality
all individuals: 911
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GenotypeQuality
all individuals: 552
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GenotypeQuality
all individuals: 3735
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GenotypeQuality
all individuals: 98
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GenotypeQuality
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GenotypeQuality
all individuals: 78
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variant carriers: 0

GenotypeQuality
all individuals: 1447
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 43
allele frequency: 7.044560943643512e-4
allele num: 61040
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8738
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5810
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.2531328320802e-3
allele num: 798
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8162
num of homozygotes: 0

Latino
type: Population
allele count: 7
allele frequency: 6.542056074766356e-4
allele num: 10700
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13120
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.7e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 5.31e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.81e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.42e-1

QD
type: SiteQuality
SIO_000300: 1.247e1

DP
type: SiteQuality
SIO_000300: 1.160404e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.2e-2

GenotypeQuality
all individuals: 254
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11222
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2860
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 78
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 911
bin: 7.5e0
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
all individuals: 98
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5224
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 552
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1447
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22396
bin: 6.25e1
variant carriers: 1

Other
type: Population
allele count: 2
allele frequency: 2.506265664160401e-3
allele num: 798
num of homozygotes: 0

South Asian
type: Population
allele count: 36
allele frequency: 2.74390243902439e-3
allele num: 13120
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.63826998689384e-5
allele num: 61040
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5810
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.869158878504673e-4
allele num: 10700
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8738
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8162
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.42e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 5.31e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.81e0

DP
type: SiteQuality
SIO_000300: 1.160404e6

QD
type: SiteQuality
SIO_000300: 1.247e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.2e-2

GenotypeQuality
all individuals: 3723
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11404
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 23343
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variant carriers: 0

GenotypeQuality
all individuals: 100
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variant carriers: 0

GenotypeQuality
all individuals: 1340
bin: 4.25e1
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GenotypeQuality
all individuals: 251
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 2.5e0
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GenotypeQuality
all individuals: 249
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 903
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variant carriers: 22

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4178
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 422
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.143641354071363e-4
allele num: 8744
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.795378307864331e-4
allele num: 10732
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.679175864606328e-4
allele num: 8154
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 1.966374987710156e-4
allele num: 61026
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.71939477303989e-4
allele num: 5816
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.274450341167551e-4
allele num: 13190
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.48e0

MQRankSum
type: SiteQuality
SIO_000300: -1.46e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.23e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.84e-1

MQ
type: SiteQuality
SIO_000300: 5.933e1

DP
type: SiteQuality
SIO_000300: 1.159539e6

BaseQRankSum
type: SiteQuality
SIO_000300: -8.37e-1

QD
type: SiteQuality
SIO_000300: 1.176e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

GenotypeQuality
all individuals: 707
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1012
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
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variant carriers: 0

GenotypeQuality
all individuals: 882
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variant carriers: 1

GenotypeQuality
all individuals: 555
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variant carriers: 0

GenotypeQuality
all individuals: 2790
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4380
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8724
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.229407425620851e-4
allele num: 8134
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 784
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5792
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60802
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12754
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10712
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.54e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.093e0

DP
type: SiteQuality
SIO_000300: 1.141915e6

QD
type: SiteQuality
SIO_000300: 9.67e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.2e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 9.350000000000001e-1

FS
type: SiteQuality
SIO_000300: 2.522e0

GenotypeQuality
all individuals: 2769
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4476
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variant carriers: 0

GenotypeQuality
all individuals: 4270
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variant carriers: 0

GenotypeQuality
all individuals: 703
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variant carriers: 0

GenotypeQuality
all individuals: 11727
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variant carriers: 0

GenotypeQuality
all individuals: 5742
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variant carriers: 0

GenotypeQuality
all individuals: 355
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variant carriers: 0

GenotypeQuality
all individuals: 1578
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variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5788
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 776
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8668
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12432
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8138
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.651145895251304e-5
allele num: 60564
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10670
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.933e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

DP
type: SiteQuality
SIO_000300: 1.132352e6

QD
type: SiteQuality
SIO_000300: 5.9e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.0e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.689e0

MQRankSum
type: SiteQuality
SIO_000300: 1.47e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.0e-1

GenotypeQuality
all individuals: 4356
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5796
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variant carriers: 0

GenotypeQuality
all individuals: 79
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variant carriers: 0

GenotypeQuality
all individuals: 20518
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variant carriers: 0

GenotypeQuality
all individuals: 1182
bin: 7.5e0
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GenotypeQuality
all individuals: 411
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variant carriers: 0

GenotypeQuality
all individuals: 11746
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variant carriers: 0

GenotypeQuality
all individuals: 1434
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variant carriers: 0

GenotypeQuality
all individuals: 879
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variant carriers: 0

GenotypeQuality
all individuals: 701
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variant carriers: 0

GenotypeQuality
all individuals: 888
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 1828
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5762
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.32691988721181e-4
allele num: 60290
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12330
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 776
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8676
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8082
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10632
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 1.899e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

DP
type: SiteQuality
SIO_000300: 1.129455e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.88e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.21e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.216e1

GenotypeQuality
all individuals: 1764
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5853
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 661
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1197
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variant carriers: 0

GenotypeQuality
all individuals: 20835
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variant carriers: 0

GenotypeQuality
all individuals: 4354
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variant carriers: 0

GenotypeQuality
all individuals: 549
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GenotypeQuality
all individuals: 2753
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 892
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 1610
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 78
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 8.25e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 8.289124668435013e-5
allele num: 60320
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.882884579175297e-4
allele num: 10622
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.445785097016142e-4
allele num: 12266
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.154467790348649e-4
allele num: 8662
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5776
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.233654083395016e-4
allele num: 8106
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.29e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.18e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.482e0

MQRankSum
type: SiteQuality
SIO_000300: -4.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

DP
type: SiteQuality
SIO_000300: 1.125943e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.7e-2

QD
type: SiteQuality
SIO_000300: 1.216e1

GenotypeQuality
all individuals: 721
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4737
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variant carriers: 0

GenotypeQuality
all individuals: 689
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variant carriers: 0

GenotypeQuality
all individuals: 256
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variant carriers: 0

GenotypeQuality
all individuals: 1773
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variant carriers: 0

GenotypeQuality
all individuals: 11678
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variant carriers: 0

GenotypeQuality
all individuals: 2688
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1544
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 884
bin: 9.75e1
variant carriers: 3

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
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variant carriers: 0

GenotypeQuality
all individuals: 1267
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10592
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8090
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.386447500838645e-5
allele num: 11924
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8656
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60150
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.291989664082687e-3
allele num: 774
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5782
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.28e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.85e-1

QD
type: SiteQuality
SIO_000300: 1.321e1

FS
type: SiteQuality
SIO_000300: 1.448e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.61e-1

DP
type: SiteQuality
SIO_000300: 1.109387e6

MQRankSum
type: SiteQuality
SIO_000300: 1.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.666e0

GenotypeQuality
all individuals: 6166
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 468
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1358
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11766
bin: 2.25e1
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GenotypeQuality
all individuals: 4669
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GenotypeQuality
all individuals: 2725
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variant carriers: 0

GenotypeQuality
all individuals: 217
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variant carriers: 0

GenotypeQuality
all individuals: 19315
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variant carriers: 0

GenotypeQuality
all individuals: 82
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variant carriers: 0

GenotypeQuality
all individuals: 559
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variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 882
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5784
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8098
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8656
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11842
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.661460756296936e-5
allele num: 60188
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10636
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.95e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 6.954e0

QD
type: SiteQuality
SIO_000300: 1.162e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -5.129e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.128e0

VQSLOD
type: SiteQuality
SIO_000300: 5.92e-1

DP
type: SiteQuality
SIO_000300: 1.109199e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.88e-1

GenotypeQuality
all individuals: 277
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8386
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 871
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 908
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2099
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2439
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GenotypeQuality
all individuals: 38622
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GenotypeQuality
all individuals: 1251
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GenotypeQuality
all individuals: 303
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variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8490
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 774
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.582228410493339e-5
allele num: 63202
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9496
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9264
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.685e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

DP
type: SiteQuality
SIO_000300: 1.559651e6

VQSLOD
type: SiteQuality
SIO_000300: 6.74e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.27e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.752e0

QD
type: SiteQuality
SIO_000300: 1.51e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.72e0

MQRankSum
type: SiteQuality
SIO_000300: 6.52e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63210
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9260
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 774
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.727526618956188e-5
allele num: 11458
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9490
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.97e-1

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.963e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 9.239000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.29e0

MQRankSum
type: SiteQuality
SIO_000300: -1.899e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.236e0

QD
type: SiteQuality
SIO_000300: 1.743e1

DP
type: SiteQuality
SIO_000300: 1.559693e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 774
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.727526618956188e-5
allele num: 11458
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8494
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63204
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9488
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.6e0

QD
type: SiteQuality
SIO_000300: 1.723e1

InbreedingCoeff
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SIO_000300: -2.0e-4

VQSLOD
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DP
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MQRankSum
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MQ
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.661e0

FS
type: SiteQuality
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ReadPosRankSum
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SIO_000300: 1.26e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9254
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.582078217947095e-5
allele num: 63208
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 774
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9492
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.1482e1

QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.559573e6

VQSLOD
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MQ
type: SiteQuality
SIO_000300: 5.975e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.18e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.6e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.329e0

MQRankSum
type: SiteQuality
SIO_000300: 8.06e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9500
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.581727879535605e-5
allele num: 63222
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8496
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.8e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.02e-1

DP
type: SiteQuality
SIO_000300: 1.562318e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.32e-2

MQ
type: SiteQuality
SIO_000300: 5.922e1

MQRankSum
type: SiteQuality
SIO_000300: -9.389999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.136e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.117e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: -4.33e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.726003490401397e-5
allele num: 11460
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63222
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 774
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9266
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.8e-1

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.922e1

DP
type: SiteQuality
SIO_000300: 1.562318e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
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BaseQRankSum
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VQSLOD
type: SiteQuality
SIO_000300: 1.02e-1

ClippingRankSum
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InbreedingCoeff
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11460
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.581627811343435e-5
allele num: 63226
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9276
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 9500
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
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ClippingRankSum
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QD
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DP
type: SiteQuality
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9498
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.58122766515923e-5
allele num: 63242
num of homozygotes: 0

MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
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MQ
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.2e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 776
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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East Asian
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allele frequency: 1.177024482109228e-4
allele num: 8496
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63242
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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VQSLOD
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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DP
type: SiteQuality
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MQ
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.2e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.581277672359266e-5
allele num: 63240
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Other
type: Population
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11460
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
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MQRankSum
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MQ
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Other
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East Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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African
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South Asian
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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DP
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FS
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QD
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MQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Finnish)
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allele frequency: 0.0e0
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Other
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European (Non-Finnish)
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South Asian
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African
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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FS
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QD
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MQ
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MQRankSum
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VQSLOD
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InbreedingCoeff
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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Latino
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European (Finnish)
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Other
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South Asian
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African
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InbreedingCoeff
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FS
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ReadPosRankSum
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VQSLOD
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DP
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BaseQRankSum
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QD
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MQRankSum
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MQ
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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African
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East Asian
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Latino
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Other
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FS
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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QD
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MQ
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VQSLOD
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DP
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ClippingRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
allele num: 8500
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European (Non-Finnish)
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African
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Latino
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European (Finnish)
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South Asian
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Other
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MQRankSum
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ClippingRankSum
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FS
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QD
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DP
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BaseQRankSum
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MQ
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Finnish)
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South Asian
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African
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European (Non-Finnish)
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East Asian
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MQ
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FS
type: SiteQuality
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ClippingRankSum
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QD
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VQSLOD
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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DP
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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European (Finnish)
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African
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Latino
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European (Non-Finnish)
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East Asian
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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MQ
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FS
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ClippingRankSum
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QD
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VQSLOD
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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East Asian
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Latino
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African
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European (Non-Finnish)
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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MQ
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MQRankSum
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InbreedingCoeff
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FS
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DP
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QD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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Latino
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African
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South Asian
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European (Non-Finnish)
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MQ
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InbreedingCoeff
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FS
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ClippingRankSum
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QD
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MQRankSum
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ReadPosRankSum
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VQSLOD
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DP
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1834
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63518
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.719916288803627e-5
allele num: 11468
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10026
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9540
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -7.862e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

MQRankSum
type: SiteQuality
SIO_000300: -7.56e-1

MQ
type: SiteQuality
SIO_000300: 5.9e1

QD
type: SiteQuality
SIO_000300: 1.149e1

FS
type: SiteQuality
SIO_000300: 6.112e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.037e0

DP
type: SiteQuality
SIO_000300: 1.577825e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.099e0

GenotypeQuality
all individuals: 251
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 111
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

East Asian
type: Population
allele count: 7
allele frequency: 8.19672131147541e-4
allele num: 8540
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11470
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9542
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10176
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.26e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.74e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.43e-1

QD
type: SiteQuality
SIO_000300: 1.411e1

FS
type: SiteQuality
SIO_000300: 1.107e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

DP
type: SiteQuality
SIO_000300: 1.580115e6

VQSLOD
type: SiteQuality
SIO_000300: 8.23e-1

MQ
type: SiteQuality
SIO_000300: 5.955e1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.431886062816361e-5
allele num: 63614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11474
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 792
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9550
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.187e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 6.18e-1

DP
type: SiteQuality
SIO_000300: 1.582484e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.403e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.17e0

MQ
type: SiteQuality
SIO_000300: 5.947e1

GenotypeQuality
all individuals: 1176
bin: 9.75e1
variant carriers: 6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 291
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GenotypeQuality
all individuals: 127
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.715356458079135e-5
allele num: 11474
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.571585730001571e-5
allele num: 63630
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.259445843828715e-3
allele num: 794
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.095557418273261e-4
allele num: 9544
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.57670944263551e-5
allele num: 10442
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.94e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.6e-2

VQSLOD
type: SiteQuality
SIO_000300: 8.88e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.199999999999999e-2

QD
type: SiteQuality
SIO_000300: 1.133e1

FS
type: SiteQuality
SIO_000300: 4.185e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.583271e6

MQ
type: SiteQuality
SIO_000300: 5.97e1

GenotypeQuality
all individuals: 125
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variant carriers: 0

GenotypeQuality
all individuals: 1173
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variant carriers: 5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2095
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variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.439305267132339e-5
allele num: 10594
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.716875871687587e-5
allele num: 11472
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.046901172529313e-4
allele num: 9552
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.168770453482936e-4
allele num: 8556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.570105197048202e-5
allele num: 63690
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -5.92e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.33e-1

FS
type: SiteQuality
SIO_000300: 1.115e0

VQSLOD
type: SiteQuality
SIO_000300: 1.92e0

QD
type: SiteQuality
SIO_000300: 1.29e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.77e-1

DP
type: SiteQuality
SIO_000300: 1.584215e6

GenotypeQuality
all individuals: 40
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 121
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.569119723834929e-5
allele num: 63730
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11472
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10700
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.15e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.05e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.53e-1

MQ
type: SiteQuality
SIO_000300: 5.893e1

QD
type: SiteQuality
SIO_000300: 1.443e1

VQSLOD
type: SiteQuality
SIO_000300: 4.56e-1

FS
type: SiteQuality
SIO_000300: 5.769e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

DP
type: SiteQuality
SIO_000300: 1.586029e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.12e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.268806419257773e-5
allele num: 63808
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9560
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 10958
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InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.32e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

VQSLOD
type: SiteQuality
SIO_000300: 1.34e-1

FS
type: SiteQuality
SIO_000300: 3.282e0

DP
type: SiteQuality
SIO_000300: 1.587859e6

MQ
type: SiteQuality
SIO_000300: 5.906e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.366e0

QD
type: SiteQuality
SIO_000300: 1.222e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11380
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.564357674738752e-5
allele num: 63924
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
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MQ
type: SiteQuality
SIO_000300: 5.974e1

VQSLOD
type: SiteQuality
SIO_000300: 9.18e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.92e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.3e-1

DP
type: SiteQuality
SIO_000300: 1.592132e6

QD
type: SiteQuality
SIO_000300: 1.039e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -8.26e-1

FS
type: SiteQuality
SIO_000300: 4.255e0

MQRankSum
type: SiteQuality
SIO_000300: 6.4e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 8482
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GenotypeQuality
all individuals: 290
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9570
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.56289072268067e-5
allele num: 63984
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
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VQSLOD
type: SiteQuality
SIO_000300: -7.693e-1

MQ
type: SiteQuality
SIO_000300: 5.911e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.07e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.8e0

MQRankSum
type: SiteQuality
SIO_000300: 6.2e-1

QD
type: SiteQuality
SIO_000300: 1.088e1

FS
type: SiteQuality
SIO_000300: 8.73e0

DP
type: SiteQuality
SIO_000300: 1.592929e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.68e-1

GenotypeQuality
all individuals: 92
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 859
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1842
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2103
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1136
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 345
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11676
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64026
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.089864158829676e-4
allele num: 9570
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.234567901234568e-3
allele num: 810
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.54e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.22e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.98e-1

QD
type: SiteQuality
SIO_000300: 1.421e1

DP
type: SiteQuality
SIO_000300: 1.593901e6

ClippingRankSum
type: SiteQuality
SIO_000300: 6.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.086e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

MQ
type: SiteQuality
SIO_000300: 5.943e1

GenotypeQuality
all individuals: 77
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 348
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 422
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variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1841
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
all individuals: 275
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8499
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12036
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 810
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.132832080200501e-4
allele num: 9576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.677997816934352e-5
allele num: 64130
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.9e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.05e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -7.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 8.88e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.54e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

QD
type: SiteQuality
SIO_000300: 1.227e1

DP
type: SiteQuality
SIO_000300: 1.597907e6

GenotypeQuality
all individuals: 227
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 345
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 379
bin: 7.5e0
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GenotypeQuality
all individuals: 3316
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 859
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variant carriers: 0

GenotypeQuality
all individuals: 291
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variant carriers: 0

GenotypeQuality
all individuals: 50
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variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 60
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variant carriers: 0

GenotypeQuality
all individuals: 40298
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variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.630789302022179e-4
allele num: 12264
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.70170553428472e-5
allele num: 11492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.670423763116106e-5
allele num: 64234
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9582
num of homozygotes: 0

East Asian
type: Population
allele count: 64
allele frequency: 7.4487895716946e-3
allele num: 8592
num of homozygotes: 1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

DP
type: SiteQuality
SIO_000300: 1.602873e6

MQRankSum
type: SiteQuality
SIO_000300: 2.6e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.120000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.88e0

MQ
type: SiteQuality
SIO_000300: 5.951e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.76e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.69e-1

QD
type: SiteQuality
SIO_000300: 1.271e1

GenotypeQuality
all individuals: 333
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 861
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 363
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variant carriers: 0

GenotypeQuality
all individuals: 52
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variant carriers: 0

GenotypeQuality
all individuals: 329
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variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 274
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variant carriers: 0

GenotypeQuality
all individuals: 93
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GenotypeQuality
all individuals: 1850
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variant carriers: 0

GenotypeQuality
all individuals: 40551
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variant carriers: 0

GenotypeQuality
all individuals: 2118
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variant carriers: 0

GenotypeQuality
all individuals: 86
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variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9588
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.109259374417014e-5
allele num: 64324
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12536
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.53e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.59e0

DP
type: SiteQuality
SIO_000300: 1.598358e6

MQ
type: SiteQuality
SIO_000300: 5.948e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.45e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.056e0

QD
type: SiteQuality
SIO_000300: 1.254e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.74e-1

GenotypeQuality
all individuals: 99
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
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variant carriers: 0

GenotypeQuality
all individuals: 64
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variant carriers: 0

GenotypeQuality
all individuals: 40589
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variant carriers: 0

GenotypeQuality
all individuals: 862
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variant carriers: 0

GenotypeQuality
all individuals: 2119
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variant carriers: 0

GenotypeQuality
all individuals: 46
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variant carriers: 0

GenotypeQuality
all individuals: 356
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variant carriers: 0

GenotypeQuality
all individuals: 334
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variant carriers: 0

GenotypeQuality
all individuals: 237
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variant carriers: 0

GenotypeQuality
all individuals: 274
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GenotypeQuality
all individuals: 1062
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 291
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64342
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12638
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.599012e6

MQ
type: SiteQuality
SIO_000300: 5.929e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.97e-1

QD
type: SiteQuality
SIO_000300: 1.359e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.35e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.61e-1

FS
type: SiteQuality
SIO_000300: 7.98e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.169999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.563e0

GenotypeQuality
all individuals: 2118
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 856
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1852
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variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
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variant carriers: 0

GenotypeQuality
all individuals: 347
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variant carriers: 0

GenotypeQuality
all individuals: 2785
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variant carriers: 0

GenotypeQuality
all individuals: 124
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GenotypeQuality
all individuals: 8524
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1060
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 273
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13200
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64486
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.326663564448581e-4
allele num: 8596
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.955e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 1.177e1

VQSLOD
type: SiteQuality
SIO_000300: 7.68e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.09e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.97e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.8e0

FS
type: SiteQuality
SIO_000300: 3.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.12e-1

DP
type: SiteQuality
SIO_000300: 1.604722e6

GenotypeQuality
all individuals: 335
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40812
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
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GenotypeQuality
all individuals: 2115
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 349
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variant carriers: 0

GenotypeQuality
all individuals: 858
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1059
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 119
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64544
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.695652173913044e-5
allele num: 11500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.427213309566251e-5
allele num: 13464
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.31e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.72e-1

DP
type: SiteQuality
SIO_000300: 1.605905e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.0e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.8e-1

MQ
type: SiteQuality
SIO_000300: 5.948e1

QD
type: SiteQuality
SIO_000300: 1.198e1

GenotypeQuality
all individuals: 67
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1059
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 2694
bin: 2.25e1
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GenotypeQuality
all individuals: 858
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40812
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 349
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2115
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8531
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.295984134853743e-5
allele num: 64544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.427213309566251e-5
allele num: 13464
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.72e-1

DP
type: SiteQuality
SIO_000300: 1.605905e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.37e-1

QD
type: SiteQuality
SIO_000300: 1.198e1

VQSLOD
type: SiteQuality
SIO_000300: 1.31e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 6.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.0e-1

MQ
type: SiteQuality
SIO_000300: 5.948e1

GenotypeQuality
all individuals: 79
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2098
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40860
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 1.25e1
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GenotypeQuality
all individuals: 311
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variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 2.5e0
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GenotypeQuality
all individuals: 8476
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variant carriers: 0

GenotypeQuality
all individuals: 859
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 150
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GenotypeQuality
all individuals: 187
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GenotypeQuality
all individuals: 1847
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GenotypeQuality
all individuals: 273
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 293
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64676
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.438848920863309e-4
allele num: 13900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.607659e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.06e0

FS
type: SiteQuality
SIO_000300: 1.514e0

MQRankSum
type: SiteQuality
SIO_000300: -4.2e-2

QD
type: SiteQuality
SIO_000300: 1.161e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 6.46e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.85e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.113e0

GenotypeQuality
all individuals: 167
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 857
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 469
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1849
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8443
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14086
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.544783266907653e-5
allele num: 64734
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.15e0

DP
type: SiteQuality
SIO_000300: 1.608783e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.45e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.57e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.733e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.29e0

QD
type: SiteQuality
SIO_000300: 1.149e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 254
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
all individuals: 877
bin: 9.75e1
variant carriers: 6

GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.540452276788465e-5
allele num: 64916
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.044495508669313e-4
allele num: 9574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.606882168925965e-4
allele num: 11508
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14800
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.513317191283293e-4
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.95e1

DP
type: SiteQuality
SIO_000300: 1.606007e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.96e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.14e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -5.18e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.7e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.2e-1

QD
type: SiteQuality
SIO_000300: 1.301e1

GenotypeQuality
all individuals: 8519
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 315
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GenotypeQuality
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variant carriers: 10

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 41
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variant carriers: 0

GenotypeQuality
all individuals: 42302
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 2.087246921310791e-4
allele num: 9582
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.33422281521014e-4
allele num: 14990
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.154414253623411e-5
allele num: 64994
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.162790697674419e-4
allele num: 8600
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.512401693889897e-4
allele num: 6612
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.608325e6

QD
type: SiteQuality
SIO_000300: 1.248e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.21e-1

MQ
type: SiteQuality
SIO_000300: 5.939e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.0e-2

FS
type: SiteQuality
SIO_000300: 5.570000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.34e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.27e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.925e0

GenotypeQuality
all individuals: 123
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 317
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variant carriers: 0

GenotypeQuality
all individuals: 255
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GenotypeQuality
all individuals: 140
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variant carriers: 0

GenotypeQuality
all individuals: 283
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GenotypeQuality
all individuals: 2074
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variant carriers: 0

GenotypeQuality
all individuals: 51
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variant carriers: 0

GenotypeQuality
all individuals: 77
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variant carriers: 0

GenotypeQuality
all individuals: 42439
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 84
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variant carriers: 0

GenotypeQuality
all individuals: 831
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15276
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.162790697674419e-4
allele num: 8600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65016
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9584
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 9.19e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.73e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.6e0

MQ
type: SiteQuality
SIO_000300: 5.936e1

QD
type: SiteQuality
SIO_000300: 1.234e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e0

DP
type: SiteQuality
SIO_000300: 1.611398e6

GenotypeQuality
all individuals: 238
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1551
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 261
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variant carriers: 0

GenotypeQuality
all individuals: 155
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GenotypeQuality
all individuals: 237
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GenotypeQuality
all individuals: 42439
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variant carriers: 0

GenotypeQuality
all individuals: 77
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variant carriers: 0

GenotypeQuality
all individuals: 317
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GenotypeQuality
all individuals: 1812
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variant carriers: 0

GenotypeQuality
all individuals: 140
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variant carriers: 0

GenotypeQuality
all individuals: 255
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GenotypeQuality
all individuals: 865
bin: 9.75e1
variant carriers: 4

South Asian
type: Population
allele count: 1
allele frequency: 6.546216286986122e-5
allele num: 15276
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9584
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.614248800295312e-5
allele num: 65016
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.611398e6

BaseQRankSum
type: SiteQuality
SIO_000300: 6.73e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.19e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.39e-1

MQ
type: SiteQuality
SIO_000300: 5.936e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.6e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.234e1

GenotypeQuality
all individuals: 1442
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
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GenotypeQuality
all individuals: 1820
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 52
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GenotypeQuality
all individuals: 71
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variant carriers: 0

GenotypeQuality
all individuals: 222
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GenotypeQuality
all individuals: 267
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GenotypeQuality
all individuals: 316
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GenotypeQuality
all individuals: 104
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GenotypeQuality
all individuals: 826
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variant carriers: 0

GenotypeQuality
all individuals: 871
bin: 9.75e1
variant carriers: 93

GenotypeQuality
all individuals: 228
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.162790697674419e-4
allele num: 8600
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.482561908466225e-5
allele num: 15426
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 29
allele frequency: 4.456738896572922e-4
allele num: 65070
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 62
allele frequency: 9.376890502117362e-3
allele num: 6612
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.459e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.615335e6

QD
type: SiteQuality
SIO_000300: 1.123e1

VQSLOD
type: SiteQuality
SIO_000300: 4.11e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.75e-1

MQ
type: SiteQuality
SIO_000300: 5.954e1

GenotypeQuality
all individuals: 41
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 251
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GenotypeQuality
all individuals: 326
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variant carriers: 0

GenotypeQuality
all individuals: 210
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GenotypeQuality
all individuals: 2075
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variant carriers: 0

GenotypeQuality
all individuals: 45
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variant carriers: 0

GenotypeQuality
all individuals: 758
bin: 9.75e1
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GenotypeQuality
all individuals: 111
bin: 5.25e1
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GenotypeQuality
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GenotypeQuality
all individuals: 120
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GenotypeQuality
all individuals: 1810
bin: 7.75e1
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GenotypeQuality
all individuals: 167
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15930
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.201607214060056e-5
allele num: 65206
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.4e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.24e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.413e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

DP
type: SiteQuality
SIO_000300: 1.617775e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.815e0

VQSLOD
type: SiteQuality
SIO_000300: 2.06e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.61e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

GenotypeQuality
all individuals: 154
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
all individuals: 330
bin: 7.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 33
bin: 1.25e1
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GenotypeQuality
all individuals: 1047
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
all individuals: 251
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variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 1.734906315058987e-4
allele num: 11528
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65202
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16008
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9600
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.52e0

FS
type: SiteQuality
SIO_000300: 1.0751e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.935e0

MQ
type: SiteQuality
SIO_000300: 5.947e1

DP
type: SiteQuality
SIO_000300: 1.617504e6

VQSLOD
type: SiteQuality
SIO_000300: -1.297e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.95e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.84e-1

QD
type: SiteQuality
SIO_000300: 1.138e1

GenotypeQuality
all individuals: 251
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
all individuals: 8639
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 826
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variant carriers: 0

GenotypeQuality
all individuals: 23
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GenotypeQuality
all individuals: 63
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GenotypeQuality
all individuals: 1808
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variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 5.25e1
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GenotypeQuality
all individuals: 96
bin: 4.75e1
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GenotypeQuality
all individuals: 750
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GenotypeQuality
all individuals: 2074
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GenotypeQuality
all individuals: 250
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16074
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65260
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.163061177017911e-4
allele num: 8598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9610
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.852e1

QD
type: SiteQuality
SIO_000300: 1.164e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.66e0

FS
type: SiteQuality
SIO_000300: 3.813e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

MQRankSum
type: SiteQuality
SIO_000300: -4.55e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.78e0

VQSLOD
type: SiteQuality
SIO_000300: -2.056e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.122e0

DP
type: SiteQuality
SIO_000300: 1.61801e6