9-128347927-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128347927
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128347927
    reference: chr 9
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.578T>C
  hgvsp: ENSP00000265961.5:p.Met193Thr
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000473837
  gene symbol: MAPKAP1
  hgvsc: ENST00000473837.1:n.178T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.2T>C
  hgvsp: ENSP00000362596.5:p.Met1?
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.578T>C
  hgvsp: ENSP00000265960.3:p.Met193Thr
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: start_lost
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000418607
  ensembl transcript: ENST00000497932
  gene symbol: MAPKAP1
  hgvsc: ENST00000497932.1:c.2T>C
  hgvsp: ENSP00000418607.1:p.Met1?
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.2T>C
  hgvsp: ENSP00000362602.3:p.Met1?
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.578T>C
  hgvsp: ENSP00000362597.1:p.Met193Thr
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.578T>C
  hgvsp: ENSP00000377624.3:p.Met193Thr
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.2T>C
  hgvsp: ENSP00000408359.1:p.Met1?
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.2T>C
  hgvsp: ENSP00000377627.1:p.Met1?
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.257T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000400182
  ensembl transcript: ENST00000420643
  gene symbol: MAPKAP1
  hgvsc: ENST00000420643.1:c.2T>C
  hgvsp: ENSP00000400182.1:p.Met1?
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.578T>C
  hgvsp: ENSP00000362610.2:p.Met193Thr
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.281T>C
  hgvsp: ENSP00000417766.1:p.Met94Thr
  variant of: http://identifiers.org/hgnc/18752
canonical: false
consequence: start lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3686
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20850
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met1?
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

9-128347928-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128347928
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128347928
    reference: chr 9
allele count: 2
allele frequency: 1.647419317638919e-5
allele num: 121402
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: start_lost
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000418607
  ensembl transcript: ENST00000497932
  gene symbol: MAPKAP1
  hgvsc: ENST00000497932.1:c.1A>G
  hgvsp: ENSP00000418607.1:p.Met1?
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.280A>G
  hgvsp: ENSP00000417766.1:p.Met94Val
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.577A>G
  hgvsp: ENSP00000362597.1:p.Met193Val
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.1A>G
  hgvsp: ENSP00000362602.3:p.Met1?
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000473837
  gene symbol: MAPKAP1
  hgvsc: ENST00000473837.1:n.177A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000400182
  ensembl transcript: ENST00000420643
  gene symbol: MAPKAP1
  hgvsc: ENST00000420643.1:c.1A>G
  hgvsp: ENSP00000400182.1:p.Met1?
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.1A>G
  hgvsp: ENSP00000408359.1:p.Met1?
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.1A>G
  hgvsp: ENSP00000362596.5:p.Met1?
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.577A>G
  hgvsp: ENSP00000265960.3:p.Met193Val
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.1A>G
  hgvsp: ENSP00000377627.1:p.Met1?
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.577A>G
  hgvsp: ENSP00000265961.5:p.Met193Val
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.577A>G
  hgvsp: ENSP00000377624.3:p.Met193Val
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.577A>G
  hgvsp: ENSP00000362610.2:p.Met193Val
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.256A>G
  variant of: http://identifiers.org/hgnc/18752
canonical: false
consequence: start lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20850
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met1?
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: DP

9-128347940-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128347940
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128347940
    reference: chr 9
allele count: 2
allele frequency: 1.647473599235572e-5
allele num: 121398
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000473837
  gene symbol: MAPKAP1
  hgvsc: ENST00000473837.1:n.165A>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-12A>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.565A>C
  hgvsp: ENST00000350766.3:c.565A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.268A>C
  hgvsp: ENST00000468896.1:c.268A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-12A>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.565A>C
  hgvsp: ENST00000373498.1:c.565A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.565A>C
  hgvsp: ENST00000265960.3:c.565A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-12A>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000418607
  ensembl transcript: ENST00000497932
  gene symbol: MAPKAP1
  hgvsc: ENST00000497932.1:c.-12A>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.565A>C
  hgvsp: ENST00000373511.2:c.565A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.565A>C
  hgvsp: ENST00000394060.3:c.565A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000400182
  ensembl transcript: ENST00000420643
  gene symbol: MAPKAP1
  hgvsc: ENST00000420643.1:c.-12A>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.244A>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-12A>C
  variant of: http://identifiers.org/hgnc/18752
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3685
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6727
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8990
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1958
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14460
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg189Arg
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff

9-128347941-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128347941
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128347941
    reference: chr 9
allele count: 70
allele frequency: 5.766252594813667e-4
allele num: 121396
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000400182
  ensembl transcript: ENST00000420643
  gene symbol: MAPKAP1
  hgvsc: ENST00000420643.1:c.-13C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.267C>T
  hgvsp: ENST00000468896.1:c.267C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.564C>T
  hgvsp: ENST00000350766.3:c.564C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.564C>T
  hgvsp: ENST00000373498.1:c.564C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-13C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.564C>T
  hgvsp: ENST00000373511.2:c.564C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-13C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.564C>T
  hgvsp: ENST00000265960.3:c.564C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.243C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.564C>T
  hgvsp: ENST00000394060.3:c.564C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-13C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-13C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000473837
  gene symbol: MAPKAP1
  hgvsc: ENST00000473837.1:n.164C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000418607
  ensembl transcript: ENST00000497932
  gene symbol: MAPKAP1
  hgvsc: ENST00000497932.1:c.-13C>T
  variant of: http://identifiers.org/hgnc/18752
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8988
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3681
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14454
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 8.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 9.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20855
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6728
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Asp188Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

9-128347950-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128347950
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128347950
    reference: chr 9
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.234G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-22G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.555G>A
  hgvsp: ENST00000265960.3:c.555G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.555G>A
  hgvsp: ENST00000373498.1:c.555G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-22G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.555G>A
  hgvsp: ENST00000373511.2:c.555G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.555G>A
  hgvsp: ENST00000350766.3:c.555G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000473837
  gene symbol: MAPKAP1
  hgvsc: ENST00000473837.1:n.155G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.555G>A
  hgvsp: ENST00000394060.3:c.555G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-22G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000418607
  ensembl transcript: ENST00000497932
  gene symbol: MAPKAP1
  hgvsc: ENST00000497932.1:c.-22G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.258G>A
  hgvsp: ENST00000468896.1:c.258G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-22G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000400182
  ensembl transcript: ENST00000420643
  gene symbol: MAPKAP1
  hgvsc: ENST00000420643.1:c.-22G>A
  variant of: http://identifiers.org/hgnc/18752
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1959
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14464
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6734
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20878
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8988
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser185Ser
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

9-128347951-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128347951
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128347951
    reference: chr 9
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-23C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-23C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.554C>T
  hgvsp: ENSP00000265961.5:p.Ser185Leu
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.554C>T
  hgvsp: ENSP00000362610.2:p.Ser185Leu
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.554C>T
  hgvsp: ENSP00000265960.3:p.Ser185Leu
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-23C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.257C>T
  hgvsp: ENSP00000417766.1:p.Ser86Leu
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-23C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000418607
  ensembl transcript: ENST00000497932
  gene symbol: MAPKAP1
  hgvsc: ENST00000497932.1:c.-23C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.554C>T
  hgvsp: ENSP00000377624.3:p.Ser185Leu
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000400182
  ensembl transcript: ENST00000420643
  gene symbol: MAPKAP1
  hgvsc: ENST00000420643.1:c.-23C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000473837
  gene symbol: MAPKAP1
  hgvsc: ENST00000473837.1:n.154C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.554C>T
  hgvsp: ENSP00000362597.1:p.Ser185Leu
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.233C>T
  variant of: http://identifiers.org/hgnc/18752
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20881
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8990
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1960
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6731
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14464
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser185Leu
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

9-128347961-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128347961
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128347961
    reference: chr 9
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.247C>T
  hgvsp: ENSP00000417766.1:p.Pro83Ser
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.223C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-33C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.544C>T
  hgvsp: ENSP00000265960.3:p.Pro182Ser
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-33C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.544C>T
  hgvsp: ENSP00000362610.2:p.Pro182Ser
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-33C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.544C>T
  hgvsp: ENSP00000377624.3:p.Pro182Ser
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000418607
  ensembl transcript: ENST00000497932
  gene symbol: MAPKAP1
  hgvsc: ENST00000497932.1:c.-33C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-33C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000473837
  gene symbol: MAPKAP1
  hgvsc: ENST00000473837.1:n.144C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000400182
  ensembl transcript: ENST00000420643
  gene symbol: MAPKAP1
  hgvsc: ENST00000420643.1:c.-33C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.544C>T
  hgvsp: ENSP00000362597.1:p.Pro182Ser
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.544C>T
  hgvsp: ENSP00000265961.5:p.Pro182Ser
  variant of: http://identifiers.org/hgnc/18752
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20883
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6725
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8996
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro182Ser
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

9-128347973-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128347973
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128347973
    reference: chr 9
allele count: 1
allele frequency: 8.240083060037246e-6
allele num: 121358
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.235G>C
  hgvsp: ENSP00000417766.1:p.Asp79His
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000400182
  ensembl transcript: ENST00000420643
  gene symbol: MAPKAP1
  hgvsc: ENST00000420643.1:c.-45G>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000473837
  gene symbol: MAPKAP1
  hgvsc: ENST00000473837.1:n.132G>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.532G>C
  hgvsp: ENSP00000362597.1:p.Asp178His
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.532G>C
  hgvsp: ENSP00000362610.2:p.Asp178His
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-45G>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.532G>C
  hgvsp: ENSP00000265960.3:p.Asp178His
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.532G>C
  hgvsp: ENSP00000265961.5:p.Asp178His
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-45G>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-45G>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.532G>C
  hgvsp: ENSP00000377624.3:p.Asp178His
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-45G>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000418607
  ensembl transcript: ENST00000497932
  gene symbol: MAPKAP1
  hgvsc: ENST00000497932.1:c.-45G>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.211G>C
  variant of: http://identifiers.org/hgnc/18752
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6725
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1954
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20884
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp178His
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQ

9-128347974-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128347974
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128347974
    reference: chr 9
allele count: 1
allele frequency: 8.240762105679534e-6
allele num: 121348
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000400182
  ensembl transcript: ENST00000420643
  gene symbol: MAPKAP1
  hgvsc: ENST00000420643.1:c.-46C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.210C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.531C>T
  hgvsp: ENST00000373511.2:c.531C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.234C>T
  hgvsp: ENST00000468896.1:c.234C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000418607
  ensembl transcript: ENST00000497932
  gene symbol: MAPKAP1
  hgvsc: ENST00000497932.1:c.-46C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000473837
  gene symbol: MAPKAP1
  hgvsc: ENST00000473837.1:n.131C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.531C>T
  hgvsp: ENST00000373498.1:c.531C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.531C>T
  hgvsp: ENST00000350766.3:c.531C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-46C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-46C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-46C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.531C>T
  hgvsp: ENST00000265960.3:c.531C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.531C>T
  hgvsp: ENST00000394060.3:c.531C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-46C>T
  variant of: http://identifiers.org/hgnc/18752
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14450
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8976
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1954
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3678
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20877
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile177Ile
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/9-128347977-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128347977
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128347977
    reference: chr 9
allele count: 1
allele frequency: 8.242120532770671e-6
allele num: 121328
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000418607
  ensembl transcript: ENST00000497932
  gene symbol: MAPKAP1
  hgvsc: ENST00000497932.1:c.-49G>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.528G>T
  hgvsp: ENSP00000362610.2:p.Lys176Asn
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-49G>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-49G>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-49G>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-49G>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.231G>T
  hgvsp: ENSP00000417766.1:p.Lys77Asn
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.528G>T
  hgvsp: ENSP00000265961.5:p.Lys176Asn
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.207G>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.528G>T
  hgvsp: ENSP00000362597.1:p.Lys176Asn
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000400182
  ensembl transcript: ENST00000420643
  gene symbol: MAPKAP1
  hgvsc: ENST00000420643.1:c.-49G>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.528G>T
  hgvsp: ENSP00000377624.3:p.Lys176Asn
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000473837
  gene symbol: MAPKAP1
  hgvsc: ENST00000473837.1:n.128G>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.528G>T
  hgvsp: ENSP00000265960.3:p.Lys176Asn
  variant of: http://identifiers.org/hgnc/18752
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3678
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20872
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8962
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6724
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys176Asn
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

9-128348012-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128348012
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128348012
    reference: chr 9
allele count: 1
allele frequency: 8.294074713025015e-6
allele num: 120568
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-78-6C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-78-6C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.499-6C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-78-6C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000473837
  gene symbol: MAPKAP1
  hgvsc: ENST00000473837.1:n.99-6C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.499-6C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-78-6C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.499-6C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.202-6C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.178-6C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000400182
  ensembl transcript: ENST00000420643
  gene symbol: MAPKAP1
  hgvsc: ENST00000420643.1:c.-78-6C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.499-6C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.499-6C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000418607
  ensembl transcript: ENST00000497932
  gene symbol: MAPKAP1
  hgvsc: ENST00000497932.1:c.-78-6C>T
  variant of: http://identifiers.org/hgnc/18752
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3657
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6676
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14242
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.499-6C>T
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum

9-128348023-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128348023
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128348023
    reference: chr 9
allele count: 1
allele frequency: 8.347106058329577e-6
allele num: 119802
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.178-17G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.499-17G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-78-17G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.499-17G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000400182
  ensembl transcript: ENST00000420643
  gene symbol: MAPKAP1
  hgvsc: ENST00000420643.1:c.-78-17G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.499-17G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.499-17G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-78-17G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-78-17G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000473837
  gene symbol: MAPKAP1
  hgvsc: ENST00000473837.1:n.99-17G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.499-17G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-78-17G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.202-17G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000418607
  ensembl transcript: ENST00000497932
  gene symbol: MAPKAP1
  hgvsc: ENST00000497932.1:c.-78-17G>A
  variant of: http://identifiers.org/hgnc/18752
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19722
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6636
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6828
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3645
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2396
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD

http://identifiers.org/exac.variant/9-128348025-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128348025
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128348025
    reference: chr 9
allele count: 1
allele frequency: 8.349336227769892e-6
allele num: 119770
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-78-19G>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.499-19G>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000418607
  ensembl transcript: ENST00000497932
  gene symbol: MAPKAP1
  hgvsc: ENST00000497932.1:c.-78-19G>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-78-19G>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.499-19G>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000400182
  ensembl transcript: ENST00000420643
  gene symbol: MAPKAP1
  hgvsc: ENST00000420643.1:c.-78-19G>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-78-19G>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.499-19G>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.499-19G>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.178-19G>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-78-19G>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000473837
  gene symbol: MAPKAP1
  hgvsc: ENST00000473837.1:n.99-19G>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.499-19G>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.202-19G>T
  variant of: http://identifiers.org/hgnc/18752
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13881
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2409
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6865
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3644
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1938
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19732
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6621
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ

9-128348025-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128348025
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128348025
    reference: chr 9
allele count: 1
allele frequency: 8.349336227769892e-6
allele num: 119770
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.499-19G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000400182
  ensembl transcript: ENST00000420643
  gene symbol: MAPKAP1
  hgvsc: ENST00000420643.1:c.-78-19G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.202-19G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.499-19G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000473837
  gene symbol: MAPKAP1
  hgvsc: ENST00000473837.1:n.99-19G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-78-19G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.499-19G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-78-19G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.499-19G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-78-19G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.178-19G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-78-19G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000418607
  ensembl transcript: ENST00000497932
  gene symbol: MAPKAP1
  hgvsc: ENST00000497932.1:c.-78-19G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.499-19G>A
  variant of: http://identifiers.org/hgnc/18752
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19732
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6865
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2409
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1938
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13881
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3644
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ

9-128348026-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128348026
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128348026
    reference: chr 9
allele count: 1
allele frequency: 8.349754517217195e-6
allele num: 119764
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.499-20C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000418607
  ensembl transcript: ENST00000497932
  gene symbol: MAPKAP1
  hgvsc: ENST00000497932.1:c.-78-20C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.178-20C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.202-20C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000400182
  ensembl transcript: ENST00000420643
  gene symbol: MAPKAP1
  hgvsc: ENST00000420643.1:c.-78-20C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-78-20C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.499-20C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.499-20C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000473837
  gene symbol: MAPKAP1
  hgvsc: ENST00000473837.1:n.99-20C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-78-20C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.499-20C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.499-20C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-78-20C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-78-20C>T
  variant of: http://identifiers.org/hgnc/18752
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6813
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2544
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3644
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13779
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQRankSum

9-128348042-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128348042
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128348042
    reference: chr 9
allele count: 2
allele frequency: 1.68084176555619e-5
allele num: 118988
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.178-36G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000418607
  ensembl transcript: ENST00000497932
  gene symbol: MAPKAP1
  hgvsc: ENST00000497932.1:c.-78-36G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.499-36G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-78-36G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.499-36G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000473837
  gene symbol: MAPKAP1
  hgvsc: ENST00000473837.1:n.99-36G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-78-36G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.499-36G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.499-36G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000400182
  ensembl transcript: ENST00000420643
  gene symbol: MAPKAP1
  hgvsc: ENST00000420643.1:c.-78-36G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.202-36G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-78-36G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-78-36G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.499-36G>A
  variant of: http://identifiers.org/hgnc/18752
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4438
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5406
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3615
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1923
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4655
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6474
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

9-128348045-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128348045
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128348045
    reference: chr 9
allele count: 2
allele frequency: 1.684806415742831e-5
allele num: 118708
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000400182
  ensembl transcript: ENST00000420643
  gene symbol: MAPKAP1
  hgvsc: ENST00000420643.1:c.-78-39G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.499-39G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-78-39G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.499-39G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.499-39G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-78-39G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000473837
  gene symbol: MAPKAP1
  hgvsc: ENST00000473837.1:n.99-39G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.178-39G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.499-39G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000418607
  ensembl transcript: ENST00000497932
  gene symbol: MAPKAP1
  hgvsc: ENST00000497932.1:c.-78-39G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-78-39G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.499-39G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-78-39G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.202-39G>A
  variant of: http://identifiers.org/hgnc/18752
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6272
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5379
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15480
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4460
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12037
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3600
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD

9-128348050-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128348050
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128348050
    reference: chr 9
allele count: 2
allele frequency: 1.688846855367155e-5
allele num: 118424
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.499-44A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-78-44A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.499-44A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000400182
  ensembl transcript: ENST00000420643
  gene symbol: MAPKAP1
  hgvsc: ENST00000420643.1:c.-78-44A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000473837
  gene symbol: MAPKAP1
  hgvsc: ENST00000473837.1:n.99-44A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-78-44A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.499-44A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.499-44A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.178-44A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000418607
  ensembl transcript: ENST00000497932
  gene symbol: MAPKAP1
  hgvsc: ENST00000497932.1:c.-78-44A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.202-44A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-78-44A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-78-44A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.499-44A>G
  variant of: http://identifiers.org/hgnc/18752
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4424
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3580
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7231
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6308
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7428
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQRankSum

9-128414347-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128414347
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128414347
    reference: chr 9
allele count: 3
allele frequency: 3.179852454846095e-5
allele num: 94344
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.201+49A>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+5583A>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+5583A>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+5583A>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+5583A>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+5583A>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+5583A>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+5583A>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+5583A>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+5583A>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+5583A>C
  variant of: http://identifiers.org/hgnc/18752
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13546
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7447
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1543
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11327
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12818
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7362
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13148
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQ

9-128414363-A-ATT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128414363
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128414365
    reference: chr 9
allele count: 1
allele frequency: 1.035882986657827e-5
allele num: 96536
alternate allele: ATT
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+5565_498+5566dupAA
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+5565_498+5566dupAA
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+5565_-79+5566dupAA
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+5565_177+5566dupAA
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+5565_498+5566dupAA
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+5565_-79+5566dupAA
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+5565_498+5566dupAA
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+5565_498+5566dupAA
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.201+31_201+32dupAA
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+5565_-79+5566dupAA
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+5565_-79+5566dupAA
  variant of: http://identifiers.org/hgnc/18752
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5096
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20594
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1390
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11652
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7440
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8120
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: FS
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ

9-128414364-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128414364
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128414364
    reference: chr 9
allele count: 1
allele frequency: 1.034511296863362e-5
allele num: 96664
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+5566A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+5566A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+5566A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+5566A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+5566A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+5566A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.201+32A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+5566A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+5566A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+5566A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+5566A>G
  variant of: http://identifiers.org/hgnc/18752
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7444
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21164
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11393
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8160
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4781
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1321
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

9-128414371-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128414371
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128414371
    reference: chr 9
allele count: 2
allele frequency: 2.056216972014887e-5
allele num: 97266
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+5559A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+5559A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+5559A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+5559A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.201+25A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+5559A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+5559A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+5559A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+5559A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+5559A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+5559A>G
  variant of: http://identifiers.org/hgnc/18752
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24311
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8508
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9589
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3356
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7273
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1043
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/9-128414376-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128414376
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128414376
    reference: chr 9
allele count: 126
allele frequency: 1.287343168907597e-3
allele num: 97876
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+5554G>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+5554G>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+5554G>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.201+20G>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+5554G>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+5554G>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+5554G>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+5554G>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+5554G>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+5554G>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+5554G>T
  variant of: http://identifiers.org/hgnc/18752
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2346
  bin: 1.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 7792
  bin: 1.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 8871
  bin: 2.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6962
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 4.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 4.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 3.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 3.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 27024
  bin: 2.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 1
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff

9-128414376-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128414376
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128414376
    reference: chr 9
allele count: 3
allele frequency: 3.065102783113327e-5
allele num: 97876
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+5554G>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+5554G>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+5554G>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+5554G>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.201+20G>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+5554G>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+5554G>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+5554G>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+5554G>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+5554G>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+5554G>C
  variant of: http://identifiers.org/hgnc/18752
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2346
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7792
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8871
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6962
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27024
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 764
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

9-128414376-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128414376
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128414376
    reference: chr 9
allele count: 3
allele frequency: 3.065102783113327e-5
allele num: 97876
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+5554G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.201+20G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+5554G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+5554G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+5554G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+5554G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+5554G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+5554G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+5554G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+5554G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+5554G>A
  variant of: http://identifiers.org/hgnc/18752
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2346
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8871
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27024
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6962
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7792
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 646
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD

9-128414377-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128414377
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128414377
    reference: chr 9
allele count: 2
allele frequency: 2.033967253127225e-5
allele num: 98330
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+5553C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.201+19C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+5553C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+5553C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+5553C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+5553C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+5553C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+5553C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+5553C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+5553C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+5553C>T
  variant of: http://identifiers.org/hgnc/18752
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27654
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7373
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6844
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9019
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2200
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1467
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2025
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD

9-128414379-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128414379
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128414379
    reference: chr 9
allele count: 4
allele frequency: 4.050468841768435e-5
allele num: 98754
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+5551C>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+5551C>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+5551C>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+5551C>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+5551C>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+5551C>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+5551C>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+5551C>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.201+17C>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+5551C>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+5551C>G
  variant of: http://identifiers.org/hgnc/18752
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9190
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28536
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1939
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6668
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1498
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6734
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: QD

9-128414380-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128414380
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128414380
    reference: chr 9
allele count: 4
allele frequency: 4.040322417728935e-5
allele num: 99002
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+5550T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+5550T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+5550T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+5550T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+5550T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+5550T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+5550T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.201+16T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+5550T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+5550T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+5550T>C
  variant of: http://identifiers.org/hgnc/18752
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6586
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9273
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6431
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28966
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1846
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1645
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

9-128414389-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128414389
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128414389
    reference: chr 9
allele count: 5
allele frequency: 4.961794184777215e-5
allele num: 100770
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+5541G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+5541G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+5541G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+5541G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+5541G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+5541G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+5541G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.201+7G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+5541G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+5541G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+5541G>A
  variant of: http://identifiers.org/hgnc/18752
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5720
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31864
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9925
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1600
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4307
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1306
  bin: 2.75e1
  variant carriers: 0
hgvs: c.201+7G>A
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS

9-128414390-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128414390
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128414390
    reference: chr 9
allele count: 4
allele frequency: 3.954757573360753e-5
allele num: 101144
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+5540C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+5540C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+5540C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+5540C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+5540C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+5540C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+5540C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.201+6C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+5540C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+5540C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+5540C>T
  variant of: http://identifiers.org/hgnc/18752
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1626
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10078
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5558
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3998
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1191
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32191
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 8.25e1
  variant carriers: 0
hgvs: c.201+6C>T
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

9-128414391-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128414391
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128414391
    reference: chr 9
allele count: 2
allele frequency: 1.974177754965057e-5
allele num: 101308
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+5539G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.201+5G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+5539G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+5539G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+5539G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+5539G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+5539G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+5539G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+5539G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+5539G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+5539G>A
  variant of: http://identifiers.org/hgnc/18752
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5527
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32121
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3915
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10235
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 4.75e1
  variant carriers: 0
hgvs: c.201+5G>A
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: African
reference allele: C
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

9-128414415-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128414415
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128414415
    reference: chr 9
allele count: 21
allele frequency: 2.027731644200687e-4
allele num: 103564
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+5515A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+5515A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+5515A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+5515A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+5515A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.182A>G
  hgvsp: ENSP00000417766.1:p.Asn61Ser
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+5515A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+5515A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+5515A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+5515A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+5515A>G
  variant of: http://identifiers.org/hgnc/18752
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1107
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11484
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4497
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1661
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33314
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asn61Ser
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: QD
site quality: MQ
site quality: ClippingRankSum

9-128414420-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128414420
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128414420
    reference: chr 9
allele count: 8
allele frequency: 7.735746886361879e-5
allele num: 103416
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+5510G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+5510G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+5510G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+5510G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.177G>A
  hgvsp: ENST00000468896.1:c.177G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+5510G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+5510G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+5510G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+5510G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+5510G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+5510G>A
  variant of: http://identifiers.org/hgnc/18752
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32709
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11718
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4510
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2771
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro59Pro
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: African
population: Latino
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

9-128414421-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128414421
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128414421
    reference: chr 9
allele count: 6
allele frequency: 5.805852299117511e-5
allele num: 103344
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+5509C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+5509C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+5509C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+5509C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+5509C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+5509C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+5509C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+5509C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.176C>T
  hgvsp: ENSP00000417766.1:p.Pro59Leu
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+5509C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+5509C>T
  variant of: http://identifiers.org/hgnc/18752
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4532
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11794
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32548
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1718
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro59Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Other
population: Latino
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

9-128414431-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128414431
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128414431
    reference: chr 9
allele count: 3
allele frequency: 2.932780667109842e-5
allele num: 102292
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+5499A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+5499A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+5499A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.166A>G
  hgvsp: ENSP00000417766.1:p.Met56Val
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+5499A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+5499A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+5499A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+5499A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+5499A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+5499A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+5499A>G
  variant of: http://identifiers.org/hgnc/18752
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3531
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5095
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12056
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1668
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30603
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 940
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Met56Val
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

9-128414438-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128414438
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128414438
    reference: chr 9
allele count: 1
allele frequency: 9.857266777068055e-6
allele num: 101448
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+5492G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+5492G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+5492G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+5492G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+5492G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+5492G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.159G>A
  hgvsp: ENST00000468896.1:c.159G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+5492G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+5492G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+5492G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+5492G>A
  variant of: http://identifiers.org/hgnc/18752
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1685
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12089
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5473
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3949
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29618
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 687
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gln53Gln
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ

http://identifiers.org/exac.variant/9-128414441-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128414441
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128414440
    reference: chr 9
allele count: 2
allele frequency: 1.98400888835982e-5
allele num: 100806
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+5488delT
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+5488delT
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+5488delT
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+5488delT
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.155delT
  hgvsp: ENSP00000417766.1:p.Leu52CysfsTer5
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+5488delT
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+5488delT
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+5488delT
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+5488delT
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+5488delT
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+5488delT
  variant of: http://identifiers.org/hgnc/18752
canonical: false
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12128
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2029
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28793
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5749
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4285
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1684
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36828
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Leu52CysfsTer5
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
reference allele: CA
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD

http://identifiers.org/exac.variant/9-128414441-CAA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128414441
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128414439
    reference: chr 9
allele count: 2
allele frequency: 1.98400888835982e-5
allele num: 100806
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+5487_498+5488delTT
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+5487_498+5488delTT
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+5487_-79+5488delTT
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+5487_498+5488delTT
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+5487_498+5488delTT
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+5487_-79+5488delTT
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+5487_-79+5488delTT
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.154_155delTT
  hgvsp: ENSP00000417766.1:p.Leu52AlafsTer74
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+5487_-79+5488delTT
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+5487_498+5488delTT
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+5487_177+5488delTT
  variant of: http://identifiers.org/hgnc/18752
canonical: false
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28793
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4285
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2029
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5749
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12128
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1684
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu52AlafsTer74
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: CAA
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

9-128414445-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128414445
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128414445
    reference: chr 9
allele count: 2
allele frequency: 2.001441037547034e-5
allele num: 99928
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+5485C>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+5485C>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+5485C>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+5485C>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+5485C>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.152C>G
  hgvsp: ENSP00000417766.1:p.Thr51Ser
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+5485C>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+5485C>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+5485C>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+5485C>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+5485C>G
  variant of: http://identifiers.org/hgnc/18752
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1672
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27660
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11989
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4816
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6218
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2300
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2943
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Thr51Ser
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

9-128414445-G-GT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128414445
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128414446
    reference: chr 9
allele count: 1
allele frequency: 1.000720518773517e-5
allele num: 99928
alternate allele: GT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+5484dupA
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+5484dupA
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+5484dupA
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+5484dupA
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+5484dupA
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+5484dupA
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+5484dupA
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+5484dupA
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.151dupA
  hgvsp: ENSP00000417766.1:p.Thr51AsnfsTer76
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+5484dupA
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+5484dupA
  variant of: http://identifiers.org/hgnc/18752
canonical: false
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2300
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6218
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27660
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4816
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1672
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11989
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Thr51AsnfsTer76
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

9-128414453-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128414453
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128414453
    reference: chr 9
allele count: 1
allele frequency: 1.030927835051546e-5
allele num: 97000
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+5477A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.144A>G
  hgvsp: ENST00000468896.1:c.144A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+5477A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+5477A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+5477A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+5477A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+5477A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+5477A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+5477A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+5477A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+5477A>G
  variant of: http://identifiers.org/hgnc/18752
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11458
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3524
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24044
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6395
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7567
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1631
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1335
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ser48Ser
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

9-128414456-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128414456
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128414456
    reference: chr 9
allele count: 6
allele frequency: 6.193995953255978e-5
allele num: 96868
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.141G>A
  hgvsp: ENST00000468896.1:c.141G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+5474G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+5474G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+5474G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+5474G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+5474G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+5474G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+5474G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+5474G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+5474G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+5474G>A
  variant of: http://identifiers.org/hgnc/18752
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6381
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11402
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24161
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1604
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3461
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7610
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2501
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Lys47Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

9-128414462-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128414462
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128414462
    reference: chr 9
allele count: 1
allele frequency: 1.0498687664042e-5
allele num: 95250
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+5468A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+5468A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+5468A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+5468A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+5468A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+5468A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+5468A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.135A>G
  hgvsp: ENST00000468896.1:c.135A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+5468A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+5468A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+5468A>G
  variant of: http://identifiers.org/hgnc/18752
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22936
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8408
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7206
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3921
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10617
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1496
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2437
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gln45Gln
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: T
site quality: FS
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

9-128414469-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128414469
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128414469
    reference: chr 9
allele count: 1
allele frequency: 1.068581564830843e-5
allele num: 93582
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+5461C>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+5461C>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+5461C>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+5461C>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.128C>G
  hgvsp: ENSP00000417766.1:p.Ser43Cys
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+5461C>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+5461C>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+5461C>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+5461C>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+5461C>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+5461C>G
  variant of: http://identifiers.org/hgnc/18752
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7848
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4131
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9185
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9933
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21983
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1297
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ser43Cys
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff

9-128414477-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128414477
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128414477
    reference: chr 9
allele count: 1
allele frequency: 1.088542006836044e-5
allele num: 91866
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.120A>C
  hgvsp: ENSP00000417766.1:p.Leu40Phe
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+5453A>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+5453A>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+5453A>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+5453A>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+5453A>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+5453A>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+5453A>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+5453A>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+5453A>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+5453A>C
  variant of: http://identifiers.org/hgnc/18752
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 10040
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9537
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20898
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4013
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8659
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1364
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1914
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Leu40Phe
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP

9-128414486-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128414486
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128414486
    reference: chr 9
allele count: 1
allele frequency: 1.117093768850957e-5
allele num: 89518
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+5444A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.111A>G
  hgvsp: ENST00000468896.1:c.111A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+5444A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+5444A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+5444A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+5444A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+5444A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+5444A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+5444A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+5444A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+5444A>G
  variant of: http://identifiers.org/hgnc/18752
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8798
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19697
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11137
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3979
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9538
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1192
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser37Ser
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

9-128414487-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128414487
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128414487
    reference: chr 9
allele count: 4
allele frequency: 4.487021290916025e-5
allele num: 89146
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+5443C>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+5443C>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+5443C>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.110C>G
  hgvsp: ENSP00000417766.1:p.Ser37Ter
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+5443C>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+5443C>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+5443C>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+5443C>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+5443C>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+5443C>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+5443C>G
  variant of: http://identifiers.org/hgnc/18752
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3969
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11228
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19590
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9664
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8672
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser37Ter
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

9-128414489-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128414489
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128414489
    reference: chr 9
allele count: 1
allele frequency: 1.125745806596871e-5
allele num: 88830
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.108A>T
  hgvsp: ENSP00000417766.1:p.Gln36His
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+5441A>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+5441A>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+5441A>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+5441A>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+5441A>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+5441A>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+5441A>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+5441A>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+5441A>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+5441A>T
  variant of: http://identifiers.org/hgnc/18752
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8490
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3897
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19519
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9806
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11446
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gln36His
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD

9-128414489-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128414489
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128414489
    reference: chr 9
allele count: 6
allele frequency: 6.754474839581223e-5
allele num: 88830
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+5441A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+5441A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+5441A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+5441A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.108A>G
  hgvsp: ENST00000468896.1:c.108A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+5441A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+5441A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+5441A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+5441A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+5441A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+5441A>G
  variant of: http://identifiers.org/hgnc/18752
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9806
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3897
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11446
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8490
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19519
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gln36Gln
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

9-128414491-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128414491
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128414491
    reference: chr 9
allele count: 39
allele frequency: 4.418562494335176e-4
allele num: 88264
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+5439C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+5439C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+5439C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+5439C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.106C>T
  hgvsp: ENSP00000417766.1:p.Gln36Ter
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+5439C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+5439C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+5439C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+5439C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+5439C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+5439C>T
  variant of: http://identifiers.org/hgnc/18752
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11627
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19277
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9952
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8372
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3898
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gln36Ter
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

9-128414504-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128414504
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128414504
    reference: chr 9
allele count: 5
allele frequency: 5.887755822990509e-5
allele num: 84922
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+5426C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+5426C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+5426C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+5426C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+5426C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+5426C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+5426C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.93C>T
  hgvsp: ENST00000468896.1:c.93C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+5426C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+5426C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+5426C>T
  variant of: http://identifiers.org/hgnc/18752
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13173
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17653
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7565
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3427
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11279
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1067
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Asn31Asn
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

9-128414517-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128414517
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128414517
    reference: chr 9
allele count: 2
allele frequency: 2.476718842876956e-5
allele num: 80752
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+5413G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+5413G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.80G>A
  hgvsp: ENSP00000417766.1:p.Arg27Gln
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+5413G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+5413G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+5413G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+5413G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+5413G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+5413G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+5413G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+5413G>A
  variant of: http://identifiers.org/hgnc/18752
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2905
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12740
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6540
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14858
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15888
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19486
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg27Gln
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

9-128414522-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128414522
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128414522
    reference: chr 9
allele count: 589
allele frequency: 7.401915198431649e-3
allele num: 79574
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.75A>G
  hgvsp: ENST00000468896.1:c.75A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+5408A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+5408A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+5408A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+5408A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+5408A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+5408A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+5408A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+5408A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+5408A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+5408A>G
  variant of: http://identifiers.org/hgnc/18752
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15186
  bin: 2.25e1
  variant carriers: 122
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 3.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13473
  bin: 1.25e1
  variant carriers: 104
genotype depth: GenotypeDepth
  all individuals: 15544
  bin: 7.5e0
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 4.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2551
  bin: 1.75e1
  variant carriers: 114
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 4.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1468
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 3.25e1
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6170
  bin: 2.75e1
  variant carriers: 84
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1479
  bin: 7.5e0
  variant carriers: 2
hgvs: p.Leu25Leu
num of homozygotes: 21
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

9-128414537-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128414537
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128414537
    reference: chr 9
allele count: 1
allele frequency: 1.344338988519345e-5
allele num: 74386
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+5393G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+5393G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+5393G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+5393G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+5393G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+5393G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+5393G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+5393G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.61-1G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+5393G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+5393G>A
  variant of: http://identifiers.org/hgnc/18752
canonical: false
consequence: splice acceptor
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 10665
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2181
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17268
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16969
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5136
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 7.25e1
  variant carriers: 0
hgvs: c.61-1G>A
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

9-128414549-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128414549
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128414549
    reference: chr 9
allele count: 1
allele frequency: 1.437938571264236e-5
allele num: 69544
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+5381G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+5381G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+5381G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+5381G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+5381G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+5381G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+5381G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.61-13G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+5381G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+5381G>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+5381G>A
  variant of: http://identifiers.org/hgnc/18752
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3569
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3550
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6159
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18186
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20399
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2961
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3722
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum

9-128414553-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128414553
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128414553
    reference: chr 9
allele count: 1
allele frequency: 1.475187348793297e-5
allele num: 67788
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+5377T>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+5377T>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.61-17T>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+5377T>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+5377T>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+5377T>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+5377T>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+5377T>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+5377T>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+5377T>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+5377T>A
  variant of: http://identifiers.org/hgnc/18752
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4138
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5069
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3043
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18524
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3107
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21048
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30085
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

9-128414557-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128414557
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128414557
    reference: chr 9
allele count: 1
allele frequency: 1.50665943470138e-5
allele num: 66372
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+5373T>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+5373T>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+5373T>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+5373T>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+5373T>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+5373T>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+5373T>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+5373T>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.61-21T>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+5373T>A
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+5373T>A
  variant of: http://identifiers.org/hgnc/18752
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21309
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4551
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18777
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4427
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3184
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2725
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: A
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

9-128414562-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128414562
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128414562
    reference: chr 9
allele count: 1
allele frequency: 1.546503355912282e-5
allele num: 64662
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.61-26A>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+5368A>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+5368A>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+5368A>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+5368A>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+5368A>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+5368A>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+5368A>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+5368A>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+5368A>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+5368A>T
  variant of: http://identifiers.org/hgnc/18752
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21414
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3965
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18977
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3138
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2162
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5332
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

9-128414562-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128414562
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128414562
    reference: chr 9
allele count: 9
allele frequency: 1.391853020321054e-4
allele num: 64662
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+5368A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+5368A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+5368A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+5368A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+5368A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+5368A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+5368A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.61-26A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+5368A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+5368A>G
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+5368A>G
  variant of: http://identifiers.org/hgnc/18752
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3965
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3138
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5332
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18977
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2162
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21414
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1264
  bin: 9.75e1
  variant carriers: 9
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

9-128414563-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128414563
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128414563
    reference: chr 9
allele count: 2
allele frequency: 3.136467710064925e-5
allele num: 63766
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+5367C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+5367C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+5367C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+5367C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+5367C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+5367C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+5367C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+5367C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+5367C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+5367C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.61-27C>T
  variant of: http://identifiers.org/hgnc/18752
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4266
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21348
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2002
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19028
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5517
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4238
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: QD

9-128419879-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128419879
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128419879
    reference: chr 9
allele count: 1
allele frequency: 8.405339071378139e-6
allele num: 118972
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+51A>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+51A>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.60+51A>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+51A>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+51A>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+51A>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+51A>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+51A>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+51A>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+51A>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+51A>T
  variant of: http://identifiers.org/hgnc/18752
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8640
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2805
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4342
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2511
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7173
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2775
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10028
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1863
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1642
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4887
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9173
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1087
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Other
population: Latino
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum

http://identifiers.org/exac.variant/9-128419880-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128419880
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128419880
    reference: chr 9
allele count: 1
allele frequency: 8.412551526878102e-6
allele num: 118870
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+50G>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+50G>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.60+50G>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+50G>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+50G>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+50G>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+50G>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+50G>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+50G>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+50G>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+50G>T
  variant of: http://identifiers.org/hgnc/18752
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4888
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2675
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4416
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9177
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1863
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10023
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2805
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2512
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8671
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7173
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1642
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1066
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: East Asian
reference allele: C
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ

9-128419882-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128419882
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128419882
    reference: chr 9
allele count: 1
allele frequency: 8.403361344537815e-6
allele num: 119000
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+48T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+48T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+48T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+48T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+48T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+48T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+48T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+48T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.60+48T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+48T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+48T>C
  variant of: http://identifiers.org/hgnc/18752
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4888
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4631
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2805
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2505
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2423
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1863
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9178
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7175
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10044
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1642
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8709
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: African
population: Latino
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum

9-128419902-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128419902
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128419902
    reference: chr 9
allele count: 1
allele frequency: 8.371703641691085e-6
allele num: 119450
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+28T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+28T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+28T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+28T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.60+28T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+28T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+28T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+28T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+28T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+28T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+28T>C
  variant of: http://identifiers.org/hgnc/18752
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10224
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7036
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4885
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1642
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7187
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9152
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1538
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1863
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9200
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2805
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: African
population: European (Finnish)
reference allele: A
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD

9-128419907-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128419907
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128419907
    reference: chr 9
allele count: 1
allele frequency: 8.350451759440186e-6
allele num: 119754
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+23C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+23C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+23C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+23C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+23C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+23C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+23C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+23C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+23C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+23C>T
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.60+23C>T
  variant of: http://identifiers.org/hgnc/18752
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4884
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9336
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7189
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10265
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9200
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7517
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1863
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2805
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 893
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

9-128419911-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128419911
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128419911
    reference: chr 9
allele count: 1
allele frequency: 8.332361224523806e-6
allele num: 120014
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-79+19T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.498+19T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-79+19T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-79+19T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.177+19T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.498+19T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.60+19T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-79+19T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.498+19T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.498+19T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.498+19T>C
  variant of: http://identifiers.org/hgnc/18752
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7894
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9203
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4884
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2805
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10291
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9474
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7188
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1864
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

9-128419936-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 128419936
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 128419936
    reference: chr 9
allele count: 1
allele frequency: 8.258456659619451e-6
allele num: 121088
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362596
  ensembl transcript: ENST00000373497
  gene symbol: MAPKAP1
  hgvsc: ENST00000373497.5:c.-85T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362610
  ensembl transcript: ENST00000373511
  gene symbol: MAPKAP1
  hgvsc: ENST00000373511.2:c.492T>C
  hgvsp: ENST00000373511.2:c.492T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000408359
  ensembl transcript: ENST00000427078
  gene symbol: MAPKAP1
  hgvsc: ENST00000427078.1:c.-85T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362597
  ensembl transcript: ENST00000373498
  gene symbol: MAPKAP1
  hgvsc: ENST00000373498.1:c.492T>C
  hgvsp: ENST00000373498.1:c.492T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377624
  ensembl transcript: ENST00000394060
  gene symbol: MAPKAP1
  hgvsc: ENST00000394060.3:c.492T>C
  hgvsp: ENST00000394060.3:c.492T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265960
  ensembl transcript: ENST00000265960
  gene symbol: MAPKAP1
  hgvsc: ENST00000265960.3:c.492T>C
  hgvsp: ENST00000265960.3:c.492T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000417766
  ensembl transcript: ENST00000468896
  gene symbol: MAPKAP1
  hgvsc: ENST00000468896.1:c.54T>C
  hgvsp: ENST00000468896.1:c.54T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000377627
  ensembl transcript: ENST00000394063
  gene symbol: MAPKAP1
  hgvsc: ENST00000394063.1:c.-85T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000265961
  ensembl transcript: ENST00000350766
  gene symbol: MAPKAP1
  hgvsc: ENST00000350766.3:c.492T>C
  hgvsp: ENST00000350766.3:c.492T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119487
  ensembl transcript: ENST00000448439
  gene symbol: MAPKAP1
  hgvsc: ENST00000448439.1:n.171T>C
  variant of: http://identifiers.org/hgnc/18752
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119487
  ensembl protein: ENSP00000362602
  ensembl transcript: ENST00000373503
  gene symbol: MAPKAP1
  hgvsc: ENST00000373503.3:c.-85T>C
  variant of: http://identifiers.org/hgnc/18752
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1864
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4884
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10089
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8622
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7189
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2805
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9212
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10383
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp164Asp
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
reference allele: A

GenotypeDepth
all individuals: 14464
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 298
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1963
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 545
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 233
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 226
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1161
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8986
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6729
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1489
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8130
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.1e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.4e-1

QD
type: SiteQuality
SIO_000300: 1.09e1

MQ
type: SiteQuality
SIO_000300: 5.942e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.28e-1

FS
type: SiteQuality
SIO_000300: 2.552e0

DP
type: SiteQuality
SIO_000300: 1.980473e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.503e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.56e-1

GenotypeDepth
all individuals: 8986
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 110
bin: 8.75e1
variant carriers: 0

GenotypeDepth
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bin: 8.25e1
variant carriers: 0

GenotypeDepth
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bin: 3.75e1
variant carriers: 0

GenotypeDepth
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bin: 4.25e1
variant carriers: 0

GenotypeDepth
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bin: 5.25e1
variant carriers: 0

GenotypeDepth
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bin: 3.25e1
variant carriers: 0

GenotypeDepth
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bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1963
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3200
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4719
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29074
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.01e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.93e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.45e-1

FS
type: SiteQuality
SIO_000300: 3.77e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.49e-1

ReadPosRankSum
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QD
type: SiteQuality
SIO_000300: 1.228e1

MQ
type: SiteQuality
SIO_000300: 5.972e1

DP
type: SiteQuality
SIO_000300: 1.980414e6

GenotypeDepth
all individuals: 20858
bin: 2.75e1
variant carriers: 0

GenotypeDepth
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bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1161
bin: 5.25e1
variant carriers: 0

GenotypeDepth
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bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 232
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 226
bin: 7.75e1
variant carriers: 0

GenotypeDepth
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3199
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997062878379188e-5
allele num: 66732
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.52e-1

QD
type: SiteQuality
SIO_000300: 1.377e1

MQRankSum
type: SiteQuality
SIO_000300: 3.66e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.3e0

DP
type: SiteQuality
SIO_000300: 1.980096e6

BaseQRankSum
type: SiteQuality
SIO_000300: -8.89e-1

FS
type: SiteQuality
SIO_000300: 2.565e0

MQ
type: SiteQuality
SIO_000300: 5.98e1

VQSLOD
type: SiteQuality
SIO_000300: 1.46e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

GenotypeDepth
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bin: 1.75e1
variant carriers: 0

GenotypeDepth
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bin: 6.75e1
variant carriers: 7

GenotypeDepth
all individuals: 799
bin: 5.75e1
variant carriers: 2

GenotypeDepth
all individuals: 110
bin: 8.75e1
variant carriers: 2

GenotypeDepth
all individuals: 229
bin: 7.75e1
variant carriers: 5

GenotypeDepth
all individuals: 543
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variant carriers: 4

GenotypeDepth
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variant carriers: 1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 70

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3196
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variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 62
allele frequency: 9.290894922975485e-4
allele num: 66732
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

African
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allele count: 5
allele frequency: 4.805843906189927e-4
allele num: 10404
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.9e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.01e-1

FS
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SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.3e-2

QD
type: SiteQuality
SIO_000300: 1.296e1

BaseQRankSum
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SIO_000300: -4.072e0

VQSLOD
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SIO_000300: 5.09e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

DP
type: SiteQuality
SIO_000300: 1.981695e6

GenotypeDepth
all individuals: 296
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 220
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
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allele count: 0
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allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 5.82e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.33e0

FS
type: SiteQuality
SIO_000300: 4.671e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.47e-1

QD
type: SiteQuality
SIO_000300: 1.194e1

VQSLOD
type: SiteQuality
SIO_000300: 1.86e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.16e-1

DP
type: SiteQuality
SIO_000300: 1.977801e6

GenotypeDepth
all individuals: 386
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variant carriers: 0

GenotypeDepth
all individuals: 296
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variant carriers: 0

GenotypeDepth
all individuals: 109
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variant carriers: 0

GenotypeDepth
all individuals: 170
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variant carriers: 0

GenotypeDepth
all individuals: 3690
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2127
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
all individuals: 8432
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
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European (Finnish)
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South Asian
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East Asian
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Latino
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European (Non-Finnish)
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FS
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MQRankSum
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MQ
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QD
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InbreedingCoeff
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VQSLOD
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DP
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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Other
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African
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Latino
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European (Finnish)
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South Asian
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DP
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BaseQRankSum
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FS
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MQRankSum
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VQSLOD
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InbreedingCoeff
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QD
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ReadPosRankSum
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MQ
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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East Asian
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Latino
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South Asian
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European (Non-Finnish)
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FS
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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QD
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DP
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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allele num: 66700
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European (Finnish)
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Latino
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East Asian
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South Asian
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Other
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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QD
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MQ
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FS
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MQRankSum
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DP
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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South Asian
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African
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Other
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East Asian
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European (Non-Finnish)
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FS
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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MQ
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VQSLOD
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QD
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MQRankSum
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ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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South Asian
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African
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East Asian
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European (Non-Finnish)
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InbreedingCoeff
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DP
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FS
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VQSLOD
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QD
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MQRankSum
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ClippingRankSum
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MQ
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ReadPosRankSum
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BaseQRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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European (Finnish)
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European (Non-Finnish)
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Latino
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East Asian
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ReadPosRankSum
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MQRankSum
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DP
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QD
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FS
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InbreedingCoeff
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MQ
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VQSLOD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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Latino
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South Asian
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European (Finnish)
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East Asian
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FS
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BaseQRankSum
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InbreedingCoeff
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DP
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ClippingRankSum
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MQRankSum
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QD
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VQSLOD
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Non-Finnish)
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Latino
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East Asian
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African
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South Asian
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InbreedingCoeff
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FS
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ClippingRankSum
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VQSLOD
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QD
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DP
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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Latino
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European (Non-Finnish)
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East Asian
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South Asian
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Other
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DP
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BaseQRankSum
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ReadPosRankSum
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MQ
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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QD
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FS
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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South Asian
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European (Non-Finnish)
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African
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ClippingRankSum
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DP
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MQ
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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FS
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InbreedingCoeff
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VQSLOD
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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European (Finnish)
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South Asian
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European (Non-Finnish)
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MQRankSum
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FS
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VQSLOD
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MQ
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DP
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QD
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African
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East Asian
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European (Finnish)
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European (Non-Finnish)
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QD
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VQSLOD
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InbreedingCoeff
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MQ
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ClippingRankSum
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ReadPosRankSum
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DP
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FS
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MQRankSum
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2880
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 3
allele frequency: 4.174784302811021e-4
allele num: 7186
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9760
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7278
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10202
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53000
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 706
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6212
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.38e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.799e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.73e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.5e0

MQRankSum
type: SiteQuality
SIO_000300: 6.56e-1

DP
type: SiteQuality
SIO_000300: 1.041886e6

QD
type: SiteQuality
SIO_000300: 1.204e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.2e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 307
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1773
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
all individuals: 1321
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 805
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6260
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 734
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10666
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7410
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7264
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.844133810349279e-5
allele num: 54226
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9976
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.644e0

QD
type: SiteQuality
SIO_000300: 1.776e1

DP
type: SiteQuality
SIO_000300: 1.1031e6

MQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.295e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e0

VQSLOD
type: SiteQuality
SIO_000300: 1.25e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.1e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

MQ
type: SiteQuality
SIO_000300: 6.031e1

GenotypeQuality
all individuals: 353
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 771
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 25470
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variant carriers: 0

GenotypeQuality
all individuals: 639
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9998
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6268
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7276
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 732
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7410
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.842231310563354e-5
allele num: 54282
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10698
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.15e0

MQRankSum
type: SiteQuality
SIO_000300: -4.4e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.166e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.55e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.59e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

DP
type: SiteQuality
SIO_000300: 1.107641e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.66e-1

GenotypeQuality
all individuals: 8109
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 178
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GenotypeQuality
all individuals: 330
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 859
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1023
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1322
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 512
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1059
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2427
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10952
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.591849729385546e-4
allele num: 6282
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7278
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10040
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 734
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7458
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.834122005795825e-5
allele num: 54522
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.58e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.35e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.69e-1

DP
type: SiteQuality
SIO_000300: 1.138118e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.06e0

FS
type: SiteQuality
SIO_000300: 1.609e0

VQSLOD
type: SiteQuality
SIO_000300: 1.2e0

QD
type: SiteQuality
SIO_000300: 1.508e1

GenotypeQuality
all individuals: 194
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 160
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variant carriers: 0

GenotypeQuality
all individuals: 588
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variant carriers: 0

GenotypeQuality
all individuals: 2114
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variant carriers: 0

GenotypeQuality
all individuals: 764
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variant carriers: 0

GenotypeQuality
all individuals: 847
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GenotypeQuality
all individuals: 2186
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variant carriers: 0

GenotypeQuality
all individuals: 257
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GenotypeQuality
all individuals: 32088
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3341
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variant carriers: 0

GenotypeQuality
all individuals: 7893
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 98
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variant carriers: 1

GenotypeQuality
all individuals: 646
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 690
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2585
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1436
bin: 9.75e1
variant carriers: 125

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11168
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.825617058565795e-5
allele num: 54776
num of homozygotes: 0

Latino
type: Population
allele count: 7
allele frequency: 6.937561942517344e-4
allele num: 10090
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7484
num of homozygotes: 0

African
type: Population
allele count: 117
allele frequency: 1.597487711632987e-2
allele num: 7324
num of homozygotes: 1

Other
type: Population
allele count: 1
allele frequency: 1.351351351351351e-3
allele num: 740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6294
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.5e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -6.3e-2

DP
type: SiteQuality
SIO_000300: 1.171002e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.58e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.13e0

QD
type: SiteQuality
SIO_000300: 1.148e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.9e-2

FS
type: SiteQuality
SIO_000300: 2.775e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.47e-2

GenotypeQuality
all individuals: 7893
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1436
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 103
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GenotypeQuality
all individuals: 98
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.177629488401653e-4
allele num: 6294
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11168
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7484
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7324
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10090
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.825617058565795e-5
allele num: 54776
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 740
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.148e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.3e-2

MQRankSum
type: SiteQuality
SIO_000300: -3.5e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.47e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.775e0

VQSLOD
type: SiteQuality
SIO_000300: 2.13e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.58e-1

DP
type: SiteQuality
SIO_000300: 1.171002e6

GenotypeQuality
all individuals: 588
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.954154727793696e-5
allele num: 11168
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.982160555004955e-4
allele num: 10090
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7324
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7484
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6294
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 740
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54776
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.171002e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.47e-2

MQRankSum
type: SiteQuality
SIO_000300: -3.5e-2

ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 4.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.13e0

FS
type: SiteQuality
SIO_000300: 2.775e0

QD
type: SiteQuality
SIO_000300: 1.148e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 512
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GenotypeQuality
all individuals: 1307
bin: 9.75e1
variant carriers: 2

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10122
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.731494127287626e-4
allele num: 7322
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 744
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54946
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7506
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11382
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6308
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.26e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.52e-1

MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

FS
type: SiteQuality
SIO_000300: 1.018e0

VQSLOD
type: SiteQuality
SIO_000300: 4.8e-1

DP
type: SiteQuality
SIO_000300: 1.177253e6

QD
type: SiteQuality
SIO_000300: 8.630000000000001e0

GenotypeQuality
all individuals: 558
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 669
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 599
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7658
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1773
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 586
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1309
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1857
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33948
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 803
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2817
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2713
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10142
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 3.466805338880222e-4
allele num: 11538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6312
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7336
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55130
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 748
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.87e-1

FS
type: SiteQuality
SIO_000300: 2.205e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.73e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.03e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.188952e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.48e-1

QD
type: SiteQuality
SIO_000300: 1.682e1

GenotypeQuality
all individuals: 682
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7558
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34442
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 570
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1774
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 785
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 525
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2671
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 390
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 543
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2756
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1309
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 274
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 533
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7564
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 3.439972480220158e-4
allele num: 11628
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 748
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10154
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7342
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55254
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6312
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.85e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.9e-2

QD
type: SiteQuality
SIO_000300: 1.652e1

MQRankSum
type: SiteQuality
SIO_000300: 7.33e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.218e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

DP
type: SiteQuality
SIO_000300: 1.193912e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.3e-2

GenotypeQuality
all individuals: 37850
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 547
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 947
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1685
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6639
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 696
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 736
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2893
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 434
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1309
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 540
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12298
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.355380862022228e-4
allele num: 7378
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7656
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.329787234042553e-3
allele num: 752
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.939111886755866e-4
allele num: 10314
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.784567064030266e-5
allele num: 56036
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6336
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

DP
type: SiteQuality
SIO_000300: 1.236505e6

QD
type: SiteQuality
SIO_000300: 9.52e0

MQRankSum
type: SiteQuality
SIO_000300: -1.77e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.0e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.65e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.19e0

FS
type: SiteQuality
SIO_000300: 6.285e0

GenotypeQuality
all individuals: 407
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 367
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 864
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6477
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 724
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2942
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 554
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1522
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 471
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1208
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 707
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38505
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1306
bin: 9.75e1
variant carriers: 4

Latino
type: Population
allele count: 4
allele frequency: 3.869220352099052e-4
allele num: 10338
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 754
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56164
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7380
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6348
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12478
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7682
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

FS
type: SiteQuality
SIO_000300: 7.59e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.46e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.243464e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.38e0

MQRankSum
type: SiteQuality
SIO_000300: 6.66e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.98e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.48e-1

QD
type: SiteQuality
SIO_000300: 9.41e0

GenotypeQuality
all individuals: 681
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 367
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1506
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 903
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37544
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6406
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2951
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1192
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 284
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 790
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 834
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1305
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 714
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56218
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 754
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7692
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.15059861373661e-4
allele num: 6348
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7386
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.974e1

FS
type: SiteQuality
SIO_000300: 4.417e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.956e0

VQSLOD
type: SiteQuality
SIO_000300: 1.03e0

QD
type: SiteQuality
SIO_000300: 1.39e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.71e0

DP
type: SiteQuality
SIO_000300: 1.245208e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.7e-1

GenotypeQuality
all individuals: 330
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 731
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 571
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40753
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5668
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 670
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1316
bin: 9.75e1
variant carriers: 19

GenotypeQuality
all individuals: 762
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 749
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3197
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 357
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 434
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 8.75e1
variant carriers: 3

Latino
type: Population
allele count: 1
allele frequency: 9.582215408202377e-5
allele num: 10436
num of homozygotes: 0

African
type: Population
allele count: 20
allele frequency: 2.691065662002153e-3
allele num: 7432
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13696
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7748
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57094
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 768
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.74e0

VQSLOD
type: SiteQuality
SIO_000300: 3.51e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.79e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.14e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

DP
type: SiteQuality
SIO_000300: 1.283499e6

FS
type: SiteQuality
SIO_000300: 5.24e-1

QD
type: SiteQuality
SIO_000300: 1.18e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.4e-2

GenotypeQuality
all individuals: 776
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3163
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 443
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40215
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 678
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1306
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 791
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 630
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 585
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 511
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 739
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5846
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6394
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56944
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 760
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13778
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7732
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7410
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 7.693787266782073e-4
allele num: 10398
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.2e-1

FS
type: SiteQuality
SIO_000300: 2.807e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.34e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.01e-1

MQ
type: SiteQuality
SIO_000300: 5.928e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

QD
type: SiteQuality
SIO_000300: 9.460000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: 1.46e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.2e-1

DP
type: SiteQuality
SIO_000300: 1.283641e6

GenotypeQuality
all individuals: 729
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 811
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1304
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 783
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 690
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40186
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 438
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5930
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 502
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 604
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3171
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56888
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7726
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13804
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 6.751282743721307e-4
allele num: 7406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6384
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.319261213720317e-3
allele num: 758
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.014e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.29e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

FS
type: SiteQuality
SIO_000300: 3.256e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.03e-1

DP
type: SiteQuality
SIO_000300: 1.28317e6

MQRankSum
type: SiteQuality
SIO_000300: 5.0e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.610000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.72e-1

GenotypeQuality
all individuals: 991
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 665
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 38125
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.358326541700625e-4
allele num: 7362
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 748
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13748
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6354
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10224
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.555681979803727e-5
allele num: 56248
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.267264e6

VQSLOD
type: SiteQuality
SIO_000300: 4.08e-1

QD
type: SiteQuality
SIO_000300: 9.27e0

FS
type: SiteQuality
SIO_000300: 4.372e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.93e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.7e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

GenotypeQuality
all individuals: 1297
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 341
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10094
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13684
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6330
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7290
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 750
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.793143021087362e-5
allele num: 55768
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.598e1

MQRankSum
type: SiteQuality
SIO_000300: 2.14e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.588e0

VQSLOD
type: SiteQuality
SIO_000300: -2.911e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.91e-1

FS
type: SiteQuality
SIO_000300: 5.61e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.600000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.258193e6

MQ
type: SiteQuality
SIO_000300: 5.763e1

GenotypeQuality
all individuals: 659
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1060
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 483
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variant carriers: 0

GenotypeQuality
all individuals: 1300
bin: 9.75e1
variant carriers: 2

African
type: Population
allele count: 2
allele frequency: 2.752546105147261e-4
allele num: 7266
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9992
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55422
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 748
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7476
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6292
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.19e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.5e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.29e0

DP
type: SiteQuality
SIO_000300: 1.250311e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.5e-2

FS
type: SiteQuality
SIO_000300: 1.496e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.129999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.743e1

GenotypeQuality
all individuals: 706
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 659
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variant carriers: 0

GenotypeQuality
all individuals: 36828
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variant carriers: 0

GenotypeQuality
all individuals: 150
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2957
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1060
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1300
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variant carriers: 2

GenotypeQuality
all individuals: 8215
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1157
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 666
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variant carriers: 0

GenotypeQuality
all individuals: 610
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 761
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6292
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 748
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7266
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9992
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.608675255313775e-5
allele num: 55422
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7476
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.250311e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.5e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.29e0

FS
type: SiteQuality
SIO_000300: 1.496e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.19e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.129999999999999e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.743e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.5e-2

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 720
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 675
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GenotypeQuality
all individuals: 35669
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1289
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 859
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9838
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6252
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 742
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13552
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7400
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.76166804750069e-4
allele num: 7242
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54902
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.23583e6

VQSLOD
type: SiteQuality
SIO_000300: 3.42e0

FS
type: SiteQuality
SIO_000300: 6.830000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.08e0

MQRankSum
type: SiteQuality
SIO_000300: 8.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.46e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.63e-1

QD
type: SiteQuality
SIO_000300: 1.222e1

GenotypeQuality
all individuals: 100
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35669
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 742
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6252
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9838
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7400
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7242
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54902
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.378984651711924e-5
allele num: 13552
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.830000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.08e0

VQSLOD
type: SiteQuality
SIO_000300: 3.42e0

MQRankSum
type: SiteQuality
SIO_000300: 8.47e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.63e-1

DP
type: SiteQuality
SIO_000300: 1.23583e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.46e-1

QD
type: SiteQuality
SIO_000300: 1.222e1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2532
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6126
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13268
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7154
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7126
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.878498703835894e-5
allele num: 53234
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 728
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9364
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.610000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.8e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.89e-1

QD
type: SiteQuality
SIO_000300: 1.131e1

VQSLOD
type: SiteQuality
SIO_000300: 6.47e-1

FS
type: SiteQuality
SIO_000300: 8.48e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.99e-1

DP
type: SiteQuality
SIO_000300: 1.191229e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 152
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
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GenotypeQuality
all individuals: 447
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1302
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 238
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 1.129050468555944e-4
allele num: 53142
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6126
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7144
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9360
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7124
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 728
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13244
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.23e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.036e0

FS
type: SiteQuality
SIO_000300: 4.607e0

QD
type: SiteQuality
SIO_000300: 1.51e1

MQRankSum
type: SiteQuality
SIO_000300: 2.3e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.7e0

DP
type: SiteQuality
SIO_000300: 1.190823e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.16e-1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1297
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9066
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 720
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52264
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7056
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.638252367858234e-5
allele num: 13092
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6038
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7014
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.613e0

QD
type: SiteQuality
SIO_000300: 9.550000000000001e0

DP
type: SiteQuality
SIO_000300: 1.16334e6

MQRankSum
type: SiteQuality
SIO_000300: 3.43e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.3e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.5e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.85e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.66e-1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.737542556484061e-5
allele num: 12924
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8788
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51310
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 712
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6914
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6974
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5960
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.77e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.18e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.626e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.77e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.765e-1

FS
type: SiteQuality
SIO_000300: 2.363e0

DP
type: SiteQuality
SIO_000300: 1.140407e6

MQRankSum
type: SiteQuality
SIO_000300: -1.355e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1110
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 352
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GenotypeQuality
all individuals: 401
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variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.448016217781639e-4
allele num: 6906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6780
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50282
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 704
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12760
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.97e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.223e0

QD
type: SiteQuality
SIO_000300: 1.254e1

MQ
type: SiteQuality
SIO_000300: 5.805e1

FS
type: SiteQuality
SIO_000300: 1.648e0

VQSLOD
type: SiteQuality
SIO_000300: -3.605e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.4e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.415e0

DP
type: SiteQuality
SIO_000300: 1.116939e6

GenotypeQuality
all individuals: 372
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 472
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variant carriers: 0

GenotypeQuality
all individuals: 96
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 495
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GenotypeQuality
all individuals: 2051
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8230
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6780
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5786
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.04582651391162e-5
allele num: 48880
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 684
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.085804e6

VQSLOD
type: SiteQuality
SIO_000300: 3.7e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 9.389999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.86e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.266e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.1e-2

QD
type: SiteQuality
SIO_000300: 1.126e1

MQ
type: SiteQuality
SIO_000300: 5.906e1

GenotypeQuality
all individuals: 569
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 96
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 4
allele frequency: 5.918910920390648e-4
allele num: 6758
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8158
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48660
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5768
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 682
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.95e-1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.562e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.33e0

MQRankSum
type: SiteQuality
SIO_000300: 6.17e-1

DP
type: SiteQuality
SIO_000300: 1.08238e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1943
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GenotypeQuality
all individuals: 78
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 678
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5762
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8122
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12496
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6740
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.061940698585509e-5
allele num: 48498
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.55e-1

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.076823e6

BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.81e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.305e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 24171
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5762
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.002560819462228e-5
allele num: 12496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 678
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 1.030970349292754e-4
allele num: 48498
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8122
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6534
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.9e0

MQRankSum
type: SiteQuality
SIO_000300: 2.55e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.81e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

QD
type: SiteQuality
SIO_000300: 1.305e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.09e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.09e0

DP
type: SiteQuality
SIO_000300: 1.076823e6

GenotypeQuality
all individuals: 221
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2106
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 35

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 23859
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 527
bin: 5.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12448
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 39
allele frequency: 8.094645080946451e-4
allele num: 48180
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6702
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6496
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8036
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5728
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 674
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.83e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

QD
type: SiteQuality
SIO_000300: 9.970000000000001e0

DP
type: SiteQuality
SIO_000300: 1.072219e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.664e0

VQSLOD
type: SiteQuality
SIO_000300: 1.76e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.138e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.71e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 94
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GenotypeQuality
all individuals: 22066
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6266
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5554
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12068
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 1.081642365768182e-4
allele num: 46226
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.73e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.112e1

FS
type: SiteQuality
SIO_000300: 1.18e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.03005e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.219e0

GenotypeQuality
all individuals: 307
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 291
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 2.820874471086037e-4
allele num: 7090
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5352
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6322
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43858
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5992
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.9e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.02e0

DP
type: SiteQuality
SIO_000300: 9.83237e5

MQRankSum
type: SiteQuality
SIO_000300: -5.94e-1

FS
type: SiteQuality
SIO_000300: 4.464e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.18e-1

QD
type: SiteQuality
SIO_000300: 1.169e1

GenotypeQuality
all individuals: 130
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 735
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variant carriers: 4

GenotypeQuality
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variant carriers: 7

GenotypeQuality
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variant carriers: 5

GenotypeQuality
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variant carriers: 4

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 9

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 448
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variant carriers: 7

GenotypeQuality
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variant carriers: 3

GenotypeQuality
all individuals: 473
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variant carriers: 1

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
all individuals: 260
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variant carriers: 9

GenotypeQuality
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variant carriers: 5

GenotypeQuality
all individuals: 1785
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variant carriers: 534

GenotypeQuality
all individuals: 2514
bin: 2.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5290
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 4.87012987012987e-3
allele num: 616
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11320
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.852452183578011e-4
allele num: 43186
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5920
num of homozygotes: 0

Latino
type: Population
allele count: 32
allele frequency: 4.599022707674619e-3
allele num: 6958
num of homozygotes: 0

African
type: Population
allele count: 546
allele frequency: 8.688733290897517e-2
allele num: 6284
num of homozygotes: 21

VQSLOD
type: SiteQuality
SIO_000300: 6.9e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.36e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.86e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.26e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.487e1

MQRankSum
type: SiteQuality
SIO_000300: 2.83e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.5e-2

DP
type: SiteQuality
SIO_000300: 9.62819e5

GenotypeQuality
all individuals: 977
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 14090
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5076
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6382
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.786352268667381e-4
allele num: 5598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 584
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40460
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10474
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5812
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.079e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.47e0

QD
type: SiteQuality
SIO_000300: 3.147e1

DP
type: SiteQuality
SIO_000300: 8.79556e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 4.265e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.0e-3

MQRankSum
type: SiteQuality
SIO_000300: -4.41e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.669999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.18e0

GenotypeQuality
all individuals: 277
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4878
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.64298551643937e-5
allele num: 37836
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5296
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5792
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9656
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.199999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.65e-1

DP
type: SiteQuality
SIO_000300: 7.92006e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.299999999999999e-3

MQRankSum
type: SiteQuality
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BaseQRankSum
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SIO_000300: -2.059e0

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 112
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5454
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36866
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4790
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 544
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9390
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.925298421255295e-4
allele num: 5194
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.864e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 6.475e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.03e-2

QD
type: SiteQuality
SIO_000300: 8.44e0

DP
type: SiteQuality
SIO_000300: 7.64416e5

ClippingRankSum
type: SiteQuality
SIO_000300: -7.17e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.17e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4905
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GenotypeQuality
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GenotypeQuality
all individuals: 384
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele num: 9168
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East Asian
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allele frequency: 0.0e0
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Other
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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QD
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FS
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MQRankSum
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InbreedingCoeff
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MQ
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ReadPosRankSum
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ClippingRankSum
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SIO_000300: -2.254e0

VQSLOD
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DP
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BaseQRankSum
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SIO_000300: -1.46e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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East Asian
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allele frequency: 2.005615724027276e-4
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European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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FS
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MQ
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MQRankSum
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VQSLOD
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DP
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BaseQRankSum
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InbreedingCoeff
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QD
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 5180
num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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East Asian
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allele frequency: 0.0e0
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Other
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 2.561475409836066e-4
allele num: 35136
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FS
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MQRankSum
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DP
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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MQ
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QD
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 5066
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 1.141552511415525e-4
allele num: 8760
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Other
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East Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 2.88217661978326e-5
allele num: 34696
num of homozygotes: 0

ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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MQRankSum
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BaseQRankSum
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FS
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MQ
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ClippingRankSum
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DP
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QD
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SIO_000300: 5.03e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66076
num of homozygotes: 0

East Asian
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allele num: 8630
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South Asian
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Other
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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MQ
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InbreedingCoeff
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MQRankSum
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QD
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DP
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66046
num of homozygotes: 0

South Asian
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Other
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European (Finnish)
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Latino
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African
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East Asian
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FS
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QD
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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DP
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VQSLOD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 66074
num of homozygotes: 0

South Asian
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Other
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East Asian
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African
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Latino
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European (Finnish)
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ReadPosRankSum
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DP
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VQSLOD
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InbreedingCoeff
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MQ
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QD
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ClippingRankSum
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FS
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MQRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele num: 11538
num of homozygotes: 0

European (Non-Finnish)
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Other
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South Asian
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East Asian
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African
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European (Finnish)
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DP
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.52e0

FS
type: SiteQuality
SIO_000300: 5.994e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.83e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -6.142e-1

QD
type: SiteQuality
SIO_000300: 1.423e1

GenotypeQuality
all individuals: 98
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23417
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 131
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4874
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 521
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4462
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3893
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 334
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4319
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2372
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2580
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12247
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50952510340247e-5
allele num: 66246
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15444
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.47e0

FS
type: SiteQuality
SIO_000300: 5.69e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.36e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.647e0

QD
type: SiteQuality
SIO_000300: 1.325e1

VQSLOD
type: SiteQuality
SIO_000300: -2.812e0

DP
type: SiteQuality
SIO_000300: 2.390441e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.47e0

MQ
type: SiteQuality
SIO_000300: 5.886e1

GenotypeQuality
all individuals: 2588
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23418
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2372
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4907
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 744
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3895
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 377
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4322
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12801
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4469
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508113651444773e-5
allele num: 66308
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.396995e6

MQRankSum
type: SiteQuality
SIO_000300: -9.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.88e0

FS
type: SiteQuality
SIO_000300: 8.548999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

VQSLOD
type: SiteQuality
SIO_000300: -3.471e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.75e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.68e-1

QD
type: SiteQuality
SIO_000300: 1.491e1

MQ
type: SiteQuality
SIO_000300: 5.962e1

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3898
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14202
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2613
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23419
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4487
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5015
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2373
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4322
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66564
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0