5-80756855-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80756855
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80756855
    reference: chr 5
allele count: 7734
allele frequency: 3.421518315342417e-1
allele num: 22604
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.405+19T>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.597+19T>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.687+19T>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.429+19T>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.597+19T>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.755+19T>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.615+19T>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.627+19T>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.621+19T>A
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 4.75e1
  variant carriers: 393
genotype depth: GenotypeDepth
  all individuals: 19024
  bin: 2.5e0
  variant carriers: 3329
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 2.75e1
  variant carriers: 285
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 3.25e1
  variant carriers: 285
genotype depth: GenotypeDepth
  all individuals: 1209
  bin: 2.25e1
  variant carriers: 395
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 4.25e1
  variant carriers: 357
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 9.75e1
  variant carriers: 179
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.25e1
  variant carriers: 213
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.75e1
  variant carriers: 193
genotype depth: GenotypeDepth
  all individuals: 3748
  bin: 1.25e1
  variant carriers: 1993
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 71
genotype depth: GenotypeDepth
  all individuals: 20289
  bin: 7.5e0
  variant carriers: 5957
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 5.25e1
  variant carriers: 382
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 3.75e1
  variant carriers: 267
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 127
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.75e1
  variant carriers: 327
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 1.75e1
  variant carriers: 578
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 90
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 6.25e1
  variant carriers: 361
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 5.75e1
  variant carriers: 413
genotype quality: GenotypeQuality
  all individuals: 742
  bin: 3.25e1
  variant carriers: 384
genotype quality: GenotypeQuality
  all individuals: 9492
  bin: 2.5e0
  variant carriers: 324
genotype quality: GenotypeQuality
  all individuals: 1652
  bin: 1.25e1
  variant carriers: 895
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 4.25e1
  variant carriers: 259
genotype quality: GenotypeQuality
  all individuals: 851
  bin: 2.75e1
  variant carriers: 480
genotype quality: GenotypeQuality
  all individuals: 1718
  bin: 1.75e1
  variant carriers: 1070
num of homozygotes: 1112
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQ
site quality: DP

5-80756855-AAT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80756855
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80756853
    reference: chr 5
allele count: 17
allele frequency: 7.520792780038931e-4
allele num: 22604
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.597+17_597+18delAT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.621+17_621+18delAT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.429+17_429+18delAT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.597+17_597+18delAT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.405+17_405+18delAT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.755+17_755+18delAT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.615+17_615+18delAT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.687+17_687+18delAT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.627+17_627+18delAT
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20289
  bin: 7.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1209
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3748
  bin: 1.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19024
  bin: 2.5e0
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1718
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1652
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 8.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 9492
  bin: 2.5e0
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 742
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 512
  bin: 5.25e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: Other
reference allele: AAT
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

5-80756856-AT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80756856
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80756855
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 27176
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.687+17delA
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.405+17delA
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.627+17delA
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.615+17delA
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.429+17delA
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.621+17delA
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.597+17delA
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.755+17delA
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.597+17delA
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19556
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4751
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20802
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1264
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1020
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1892
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5707
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2484
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: European (Finnish)
reference allele: AT
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

5-80756857-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80756857
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80756857
    reference: chr 5
allele count: 28
allele frequency: 1.009518315546582e-3
allele num: 27736
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.429+17A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.405+17A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.687+17A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.597+17A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.755+17A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.615+17A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.621+17A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.597+17A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.627+17A>T
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19612
  bin: 2.5e0
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 4909
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21186
  bin: 7.5e0
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3462
  bin: 1.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1262
  bin: 6.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 5.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 2514
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1579
  bin: 2.75e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: FS

5-80756863-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80756863
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80756863
    reference: chr 5
allele count: 1
allele frequency: 3.096358682189745e-5
allele num: 32296
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.687+11A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.597+11A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.615+11A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.627+11A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.755+11A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.405+11A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.429+11A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.621+11A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.597+11A>G
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25945
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16930
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5161
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2700
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 699
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2604
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1179
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22970
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: FS

5-80756867-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80756867
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80756867
    reference: chr 5
allele count: 1
allele frequency: 2.792672028596962e-5
allele num: 35808
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.597+7A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.687+7A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.755+7A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.621+7A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.615+7A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.627+7A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.429+7A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.405+7A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.597+7A>G
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 11578
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30439
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4817
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4981
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2042
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 932
  bin: 3.75e1
  variant carriers: 0
hgvs: c.687+7A>G
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff

5-80756867-T-TAC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80756867
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80756869
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 35808
alternate allele: TAC
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.405+5_405+6dupGT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.627+5_627+6dupGT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.621+5_621+6dupGT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.687+5_687+6dupGT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.597+5_597+6dupGT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.429+5_429+6dupGT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.615+5_615+6dupGT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.755+5_755+6dupGT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.597+5_597+6dupGT
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11578
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30439
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4981
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4817
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5124
  bin: 9.75e1
  variant carriers: 0
hgvs: c.687+5_687+6dupGT
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum

5-80756882-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80756882
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80756882
    reference: chr 5
allele count: 31
allele frequency: 5.684110161722102e-4
allele num: 54538
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.619G>C
  hgvsp: ENSP00000423969.1:p.Ala207Pro
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.613G>C
  hgvsp: ENSP00000424657.1:p.Ala205Pro
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.589G>C
  hgvsp: ENSP00000426183.1:p.Ala197Pro
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.421G>C
  hgvsp: ENSP00000425146.1:p.Ala141Pro
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.397G>C
  hgvsp: ENSP00000424561.1:p.Ala133Pro
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.679G>C
  hgvsp: ENSP00000322977.4:p.Ala227Pro
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.747G>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.589G>C
  hgvsp: ENSP00000422961.1:p.Ala197Pro
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.607G>C
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15269
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 1.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 29865
  bin: 7.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3194
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3029
  bin: 1.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1360
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5159
  bin: 9.75e1
  variant carriers: 30
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ala227Pro
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

5-80756909-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80756909
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80756909
    reference: chr 5
allele count: 2
allele frequency: 2.777083506901053e-5
allele num: 72018
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.370G>A
  hgvsp: ENSP00000424561.1:p.Gly124Ser
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.562G>A
  hgvsp: ENSP00000426183.1:p.Gly188Ser
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.562G>A
  hgvsp: ENSP00000422961.1:p.Gly188Ser
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.592G>A
  hgvsp: ENSP00000423969.1:p.Gly198Ser
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.580G>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.586G>A
  hgvsp: ENSP00000424657.1:p.Gly196Ser
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.720G>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.652G>A
  hgvsp: ENSP00000322977.4:p.Gly218Ser
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.394G>A
  hgvsp: ENSP00000425146.1:p.Gly132Ser
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23030
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22539
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3055
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2933
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5136
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Gly218Ser
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/5-80756926-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80756926
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80756926
    reference: chr 5
allele count: 2
allele frequency: 2.726207028161719e-5
allele num: 73362
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.549-4G>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.357-4G>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.549-4G>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.573-4G>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.381-4G>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.639-4G>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.707-4G>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.567-4G>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.579-4G>T
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5617
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1762
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22045
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3735
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19768
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 7.25e1
  variant carriers: 0
hgvs: c.639-4G>T
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: C
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

5-80756934-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80756934
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80756934
    reference: chr 5
allele count: 1
allele frequency: 1.430819859779654e-5
allele num: 69890
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.579-12A>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.707-12A>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.381-12A>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.549-12A>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.573-12A>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.549-12A>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.567-12A>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.357-12A>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.639-12A>C
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10367
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12943
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3613
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2848
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22620
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28291
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: Other
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum

5-80756937-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80756937
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80756937
    reference: chr 5
allele count: 1
allele frequency: 1.457555970149254e-5
allele num: 68608
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.707-15C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.381-15C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.357-15C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.573-15C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.549-15C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.549-15C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.639-15C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.579-15C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.567-15C>T
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22510
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3119
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12214
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3458
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10805
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1562
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1230
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 792
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2467
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Other
reference allele: G
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ

5-80756940-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80756940
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80756940
    reference: chr 5
allele count: 4
allele frequency: 5.891536807376204e-5
allele num: 67894
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.549-18T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.639-18T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.357-18T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.549-18T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.573-18T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.579-18T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.707-18T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.567-18T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.381-18T>C
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22287
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13575
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1836
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9045
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 995
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1051
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2856
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1144
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum

5-80756949-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80756949
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80756949
    reference: chr 5
allele count: 1
allele frequency: 1.530643482520051e-5
allele num: 65332
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.357-27A>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.573-27A>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.639-27A>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.381-27A>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.549-27A>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.707-27A>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.579-27A>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.549-27A>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.567-27A>C
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5833
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2949
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5981
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15266
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1989
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21784
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1642
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3419
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1675
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1879
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

5-80756958-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80756958
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80756958
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 62118
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.357-36A>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.549-36A>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.567-36A>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.707-36A>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.639-36A>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.381-36A>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.579-36A>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.549-36A>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.573-36A>C
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 22079
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4169
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14712
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4171
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6996
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22271
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2150
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5132
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 982
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7735
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 5.25e1
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: East Asian
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQRankSum

http://identifiers.org/exac.variant/5-80756966-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80756966
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80756966
    reference: chr 5
allele count: 1
allele frequency: 1.707067258449983e-5
allele num: 58580
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.707-44T>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.549-44T>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.639-44T>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.549-44T>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.381-44T>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.567-44T>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.573-44T>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.357-44T>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.579-44T>G
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 13302
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4473
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3716
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7236
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23460
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5496
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8338
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3085
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 738
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 832
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQRankSum

http://identifiers.org/exac.variant/5-80756974-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80756974
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80756974
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 55348
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.707-52G>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.573-52G>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.567-52G>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.357-52G>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.549-52G>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.549-52G>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.381-52G>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.579-52G>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.639-52G>T
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: intron
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12766
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7287
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24048
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3600
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1562
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4337
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5209
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9790
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12981
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2315
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7995
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

5-80756974-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80756974
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80756974
    reference: chr 5
allele count: 77
allele frequency: 1.391197513911975e-3
allele num: 55348
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.579-52G>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.707-52G>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.567-52G>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.639-52G>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.549-52G>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.357-52G>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.381-52G>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.573-52G>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.549-52G>A
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3600
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4337
  bin: 1.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12766
  bin: 1.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 1562
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7287
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24048
  bin: 7.5e0
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9790
  bin: 1.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 5375
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 949
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3422
  bin: 2.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 7995
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1354
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

5-80762742-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80762742
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80762742
    reference: chr 5
allele count: 41
allele frequency: 4.568143328282378e-4
allele num: 89752
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.548+51A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.356+51A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.380+51A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.578+51A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.706+51A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.572+51A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.548+51A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.638+51A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.566+51A>G
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4111
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 8531
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 13668
  bin: 1.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 4405
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11220
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14561
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1535
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5609
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6076
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6007
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4035
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum

5-80762743-A-ATG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80762743
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80762745
    reference: chr 5
allele count: 1
allele frequency: 1.112000711680456e-5
allele num: 89928
alternate allele: ATG
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.566+49_566+50insCA
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.548+49_548+50insCA
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.380+49_380+50insCA
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.638+49_638+50insCA
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.706+49_706+50insCA
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.572+49_572+50insCA
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.548+49_548+50insCA
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.356+49_356+50insCA
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.578+49_578+50insCA
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4477
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9654
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14582
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12494
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11212
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1551
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4067
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4362
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2403
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1069
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1723
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 563
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: Other
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: ReadPosRankSum

5-80762748-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80762748
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80762748
    reference: chr 5
allele count: 2
allele frequency: 2.188279574598451e-5
allele num: 91396
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.638+45T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.356+45T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.578+45T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.548+45T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.706+45T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.548+45T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.566+45T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.380+45T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.572+45T>C
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20371
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11940
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2171
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4356
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5053
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12538
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1675
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 963
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2116
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 836
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10664
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1738
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

5-80762754-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80762754
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80762754
    reference: chr 5
allele count: 1
allele frequency: 1.020491468691322e-5
allele num: 97992
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.578+39A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.566+39A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.356+39A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.638+39A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.572+39A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.548+39A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.706+39A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.548+39A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.380+39A>G
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32971
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5965
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4649
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10882
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1906
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 625
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1032
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD

http://identifiers.org/exac.variant/5-80762755-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80762755
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80762755
    reference: chr 5
allele count: 1
allele frequency: 1.003774190958002e-5
allele num: 99624
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.356+38G>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.548+38G>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.572+38G>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.638+38G>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.566+38G>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.380+38G>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.706+38G>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.578+38G>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.548+38G>T
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10110
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6231
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3808
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34513
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2000
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 510
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4332
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff

5-80762758-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80762758
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80762758
    reference: chr 5
allele count: 8
allele frequency: 7.583225904299689e-5
allele num: 105496
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.572+35G>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.706+35G>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.380+35G>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.578+35G>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.356+35G>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.548+35G>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.638+35G>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.548+35G>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.566+35G>A
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7461
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38377
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7013
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2066
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2232
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7110
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 652
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1141
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4705
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: QD

5-80762759-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80762759
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80762759
    reference: chr 5
allele count: 241
allele frequency: 2.236409866186596e-3
allele num: 107762
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.548+34C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.572+34C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.380+34C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.356+34C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.638+34C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.706+34C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.548+34C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.566+34C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.578+34C>T
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39417
  bin: 2.25e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 6411
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7339
  bin: 2.75e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 1.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2360
  bin: 3.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 4.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 5.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 4.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 1.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 3.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2430
  bin: 9.75e1
  variant carriers: 234
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 3
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP

5-80762760-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80762760
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80762760
    reference: chr 5
allele count: 1
allele frequency: 9.135590433209699e-6
allele num: 109462
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.356+33A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.548+33A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.638+33A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.566+33A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.578+33A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.572+33A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.380+33A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.548+33A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.706+33A>G
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7564
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5640
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40373
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2401
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 652
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5416
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1003
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 739
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: African
population: Latino
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS

5-80762766-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80762766
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80762766
    reference: chr 5
allele count: 1
allele frequency: 8.695652173913043e-6
allele num: 115000
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.566+27A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.572+27A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.578+27A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.356+27A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.380+27A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.548+27A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.706+27A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.548+27A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.638+27A>G
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43495
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3027
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8033
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2536
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5233
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45394
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

5-80762771-TATATG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80762771
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80762766
    reference: chr 5
allele count: 3
allele frequency: 2.554756957454781e-5
allele num: 117428
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.548+17_548+21delCATAT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.638+17_638+21delCATAT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.572+17_572+21delCATAT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.578+17_578+21delCATAT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.706+17_706+21delCATAT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.380+17_380+21delCATAT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.548+17_548+21delCATAT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.356+17_356+21delCATAT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.566+17_566+21delCATAT
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 44468
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8456
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2659
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46656
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: TATATG
site quality: QD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum

5-80762772-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80762772
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80762772
    reference: chr 5
allele count: 3
allele frequency: 2.547294772951126e-5
allele num: 117772
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.638+21T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.548+21T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.578+21T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.706+21T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.572+21T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.566+21T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.380+21T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.548+21T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.356+21T>C
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2672
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44632
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8516
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1680
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2224
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 46926
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5381
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1156
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1661
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: BaseQRankSum

5-80762779-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80762779
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80762779
    reference: chr 5
allele count: 1
allele frequency: 8.366100560528738e-6
allele num: 119530
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.548+14T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.380+14T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.706+14T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.638+14T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.356+14T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.548+14T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.578+14T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.572+14T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.566+14T>C
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8846
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2731
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45316
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48007
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1173
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: A
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

5-80762780-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80762780
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80762780
    reference: chr 5
allele count: 2
allele frequency: 1.670843776106934e-5
allele num: 119700
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.572+13A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.356+13A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.706+13A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.578+13A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.548+13A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.566+13A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.638+13A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.548+13A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.380+13A>G
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 45385
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2741
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8856
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 786
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD

5-80762793-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80762793
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80762793
    reference: chr 5
allele count: 3
allele frequency: 2.484636663298604e-5
allele num: 120742
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.638T>C
  hgvsp: ENSP00000322977.4:p.Met213Thr
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507472
  gene symbol: SSBP2
  hgvsc: ENST00000507472.1:n.581T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.706T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.572T>C
  hgvsp: ENSP00000424657.1:p.Met191Thr
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.578T>C
  hgvsp: ENSP00000423969.1:p.Met193Thr
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.356T>C
  hgvsp: ENSP00000424561.1:p.Met119Thr
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.548T>C
  hgvsp: ENSP00000426183.1:p.Met183Thr
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: incomplete_terminal_codon_variant
  consequence: coding_sequence_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422756
  ensembl transcript: ENST00000509013
  gene symbol: SSBP2
  hgvsc: ENST00000509013.2:c.626T>C
  hgvsp: ENST00000509013.2:c.626T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.548T>C
  hgvsp: ENSP00000422961.1:p.Met183Thr
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.566T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.380T>C
  hgvsp: ENSP00000425146.1:p.Met127Thr
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9153
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45662
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2816
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met213Thr
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: VQSLOD

5-80762801-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80762801
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80762801
    reference: chr 5
allele count: 1
allele frequency: 8.27034090345204e-6
allele num: 120914
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.540A>T
  hgvsp: ENST00000509053.1:c.540A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.540A>T
  hgvsp: ENST00000514493.1:c.540A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.630A>T
  hgvsp: ENST00000320672.4:c.630A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.372A>T
  hgvsp: ENST00000504985.1:c.372A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.698A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.348A>T
  hgvsp: ENST00000512923.1:c.348A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422756
  ensembl transcript: ENST00000509013
  gene symbol: SSBP2
  hgvsc: ENST00000509013.2:c.618A>T
  hgvsp: ENST00000509013.2:c.618A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.558A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507472
  gene symbol: SSBP2
  hgvsc: ENST00000507472.1:n.573A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.570A>T
  hgvsp: ENST00000505980.1:c.570A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.564A>T
  hgvsp: ENST00000515395.1:c.564A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2822
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9261
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45665
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly210Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQ

5-80762801-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80762801
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80762801
    reference: chr 5
allele count: 1
allele frequency: 8.27034090345204e-6
allele num: 120914
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.348A>C
  hgvsp: ENST00000512923.1:c.348A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.372A>C
  hgvsp: ENST00000504985.1:c.372A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.540A>C
  hgvsp: ENST00000514493.1:c.540A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.698A>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.564A>C
  hgvsp: ENST00000515395.1:c.564A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.558A>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.570A>C
  hgvsp: ENST00000505980.1:c.570A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422756
  ensembl transcript: ENST00000509013
  gene symbol: SSBP2
  hgvsc: ENST00000509013.2:c.618A>C
  hgvsp: ENST00000509013.2:c.618A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.540A>C
  hgvsp: ENST00000509053.1:c.540A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.630A>C
  hgvsp: ENST00000320672.4:c.630A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507472
  gene symbol: SSBP2
  hgvsc: ENST00000507472.1:n.573A>C
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 45665
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2822
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9261
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly210Gly
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

5-80762814-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80762814
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80762814
    reference: chr 5
allele count: 1
allele frequency: 8.261595148791329e-6
allele num: 121042
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.527C>A
  hgvsp: ENSP00000422961.1:p.Pro176His
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.359C>A
  hgvsp: ENSP00000425146.1:p.Pro120His
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422756
  ensembl transcript: ENST00000509013
  gene symbol: SSBP2
  hgvsc: ENST00000509013.2:c.605C>A
  hgvsp: ENSP00000422756.2:p.Pro202His
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.335C>A
  hgvsp: ENSP00000424561.1:p.Pro112His
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507472
  gene symbol: SSBP2
  hgvsc: ENST00000507472.1:n.560C>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.617C>A
  hgvsp: ENSP00000322977.4:p.Pro206His
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.545C>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.685C>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.557C>A
  hgvsp: ENSP00000423969.1:p.Pro186His
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.527C>A
  hgvsp: ENSP00000426183.1:p.Pro176His
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.551C>A
  hgvsp: ENSP00000424657.1:p.Pro184His
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9357
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2833
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45646
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro206His
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ
site quality: ClippingRankSum

5-80762824-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80762824
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80762824
    reference: chr 5
allele count: 1
allele frequency: 8.258729477057249e-6
allele num: 121084
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.517T>C
  hgvsp: ENST00000509053.1:c.517T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.517T>C
  hgvsp: ENST00000514493.1:c.517T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.547T>C
  hgvsp: ENST00000505980.1:c.547T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507472
  gene symbol: SSBP2
  hgvsc: ENST00000507472.1:n.550T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.607T>C
  hgvsp: ENST00000320672.4:c.607T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422756
  ensembl transcript: ENST00000509013
  gene symbol: SSBP2
  hgvsc: ENST00000509013.2:c.595T>C
  hgvsp: ENST00000509013.2:c.595T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.349T>C
  hgvsp: ENST00000504985.1:c.349T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.541T>C
  hgvsp: ENST00000515395.1:c.541T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.675T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.325T>C
  hgvsp: ENST00000512923.1:c.325T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.535T>C
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 45600
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9401
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2836
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu203Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

5-80762858-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80762858
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80762858
    reference: chr 5
allele count: 1
allele frequency: 8.26801600687899e-6
allele num: 120948
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.641C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000504174
  gene symbol: SSBP2
  hgvsc: ENST00000504174.1:n.610C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.291C>T
  hgvsp: ENST00000512923.1:c.291C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.507C>T
  hgvsp: ENST00000515395.1:c.507C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507472
  gene symbol: SSBP2
  hgvsc: ENST00000507472.1:n.516C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422756
  ensembl transcript: ENST00000509013
  gene symbol: SSBP2
  hgvsc: ENST00000509013.2:c.561C>T
  hgvsp: ENST00000509013.2:c.561C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.501C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.483C>T
  hgvsp: ENST00000509053.1:c.483C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.483C>T
  hgvsp: ENST00000514493.1:c.483C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.573C>T
  hgvsp: ENST00000320672.4:c.573C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.315C>T
  hgvsp: ENST00000504985.1:c.315C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.513C>T
  hgvsp: ENST00000505980.1:c.513C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45235
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2840
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9473
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: c.573C>T
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

5-80762867-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80762867
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80762867
    reference: chr 5
allele count: 1
allele frequency: 8.27417299640901e-6
allele num: 120858
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.511-7A>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.571-7A>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.498A>C
  hgvsp: ENST00000515395.1:c.498A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.306A>C
  hgvsp: ENST00000504985.1:c.306A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.481-7A>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507472
  gene symbol: SSBP2
  hgvsc: ENST00000507472.1:n.514-7A>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.481-7A>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422756
  ensembl transcript: ENST00000509013
  gene symbol: SSBP2
  hgvsc: ENST00000509013.2:c.559-7A>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000504174
  gene symbol: SSBP2
  hgvsc: ENST00000504174.1:n.608-7A>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.499-7A>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.639-7A>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.289-7A>C
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9476
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2832
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.571-7A>C
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
reference allele: T
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/5-80762891-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80762891
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80762891
    reference: chr 5
allele count: 1
allele frequency: 8.423606314335294e-6
allele num: 118714
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.289-31G>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000504174
  gene symbol: SSBP2
  hgvsc: ENST00000504174.1:n.608-31G>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.289-7G>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422756
  ensembl transcript: ENST00000509013
  gene symbol: SSBP2
  hgvsc: ENST00000509013.2:c.559-31G>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.639-31G>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.511-31G>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.481-31G>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.499-31G>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.481-31G>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.481-7G>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.571-31G>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507472
  gene symbol: SSBP2
  hgvsc: ENST00000507472.1:n.514-31G>T
  variant of: http://identifiers.org/hgnc/15831
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1953
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41771
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9475
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2934
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.289-7G>T
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: African
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS

http://identifiers.org/exac.variant/5-80762896-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80762896
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80762896
    reference: chr 5
allele count: 3
allele frequency: 2.570209557752609e-5
allele num: 116722
alternate allele: A
canonical: false
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 3063
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3122
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38814
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9764
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2887
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 588
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1259
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 587
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4671
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42244
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 671
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 942
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1024
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 836
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 979
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1991
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6530
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 11334
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8504
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 16120
  num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD

5-80762896-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80762896
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80762896
    reference: chr 5
allele count: 2
allele frequency: 1.713473038501739e-5
allele num: 116722
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.481-36G>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507472
  gene symbol: SSBP2
  hgvsc: ENST00000507472.1:n.514-36G>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.499-36G>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422756
  ensembl transcript: ENST00000509013
  gene symbol: SSBP2
  hgvsc: ENST00000509013.2:c.559-36G>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.481-36G>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.639-36G>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.481-12G>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.289-36G>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.571-36G>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.289-12G>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.511-36G>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000504174
  gene symbol: SSBP2
  hgvsc: ENST00000504174.1:n.608-36G>A
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 38814
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3122
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9764
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3063
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
population: African
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/5-80762896-C-CA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80762896
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80762897
    reference: chr 5
allele count: 1
allele frequency: 8.567365192508696e-6
allele num: 116722
alternate allele: CA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.289-13dupT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.571-37dupT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.639-37dupT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.481-37dupT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.481-37dupT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.499-37dupT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000504174
  gene symbol: SSBP2
  hgvsc: ENST00000504174.1:n.608-37dupT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.289-37dupT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.481-13dupT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.511-37dupT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507472
  gene symbol: SSBP2
  hgvsc: ENST00000507472.1:n.514-37dupT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422756
  ensembl transcript: ENST00000509013
  gene symbol: SSBP2
  hgvsc: ENST00000509013.2:c.559-37dupT
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3063
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3122
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38814
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9764
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: African
reference allele: C
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS

http://identifiers.org/exac.variant/5-80762903-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80762903
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80762902
    reference: chr 5
allele count: 1
allele frequency: 8.404350091607416e-6
allele num: 118986
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.481-44delG
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.499-44delG
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.289-20delG
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.511-44delG
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.289-44delG
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.571-44delG
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.639-44delG
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422756
  ensembl transcript: ENST00000509013
  gene symbol: SSBP2
  hgvsc: ENST00000509013.2:c.559-44delG
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.481-20delG
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.481-44delG
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507472
  gene symbol: SSBP2
  hgvsc: ENST00000507472.1:n.514-44delG
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000504174
  gene symbol: SSBP2
  hgvsc: ENST00000504174.1:n.608-44delG
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4900
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36437
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2609
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2901
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9338
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
reference allele: AC
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: DP

5-80762922-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80762922
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80762922
    reference: chr 5
allele count: 1
allele frequency: 8.579272477693891e-6
allele num: 116560
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507472
  gene symbol: SSBP2
  hgvsc: ENST00000507472.1:n.514-62C>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.481-38C>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.289-38C>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.639-62C>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.499-62C>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.571-62C>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.481-62C>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422756
  ensembl transcript: ENST00000509013
  gene symbol: SSBP2
  hgvsc: ENST00000509013.2:c.559-62C>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000504174
  gene symbol: SSBP2
  hgvsc: ENST00000504174.1:n.608-62C>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.511-62C>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.481-62C>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.289-62C>G
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13651
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1669
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8150
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23749
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7570
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

5-80762924-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80762924
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80762924
    reference: chr 5
allele count: 1
allele frequency: 8.61341280642216e-6
allele num: 116098
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.289-64C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.571-64C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.639-64C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422756
  ensembl transcript: ENST00000509013
  gene symbol: SSBP2
  hgvsc: ENST00000509013.2:c.559-64C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507472
  gene symbol: SSBP2
  hgvsc: ENST00000507472.1:n.514-64C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.481-40C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.481-64C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.499-64C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.481-64C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.289-40C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.511-64C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000504174
  gene symbol: SSBP2
  hgvsc: ENST00000504174.1:n.608-64C>T
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8153
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7731
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23600
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2599
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13566
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum

5-80769472-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80769472
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80769472
    reference: chr 5
allele count: 1
allele frequency: 8.398138972403716e-6
allele num: 119074
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422756
  ensembl transcript: ENST00000509013
  gene symbol: SSBP2
  hgvsc: ENST00000509013.2:c.558+47C>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507472
  gene symbol: SSBP2
  hgvsc: ENST00000507472.1:n.513+47C>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.498+47C>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000504174
  gene symbol: SSBP2
  hgvsc: ENST00000504174.1:n.607+47C>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.288+47C>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.638+47C>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.510+47C>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.480+47C>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.288+47C>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.570+47C>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.480+47C>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.480+47C>A
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15478
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3202
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8432
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4306
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7163
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13951
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: FS

5-80769478-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80769478
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80769478
    reference: chr 5
allele count: 1
allele frequency: 8.380543729677181e-6
allele num: 119324
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422756
  ensembl transcript: ENST00000509013
  gene symbol: SSBP2
  hgvsc: ENST00000509013.2:c.558+41A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.480+41A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000504174
  gene symbol: SSBP2
  hgvsc: ENST00000504174.1:n.607+41A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.288+41A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.480+41A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507472
  gene symbol: SSBP2
  hgvsc: ENST00000507472.1:n.513+41A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.288+41A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.480+41A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.570+41A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.638+41A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.498+41A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.510+41A>T
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14481
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3213
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1638
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7350
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4067
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17817
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: QD

5-80769482-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80769482
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80769482
    reference: chr 5
allele count: 15
allele frequency: 1.255587363768771e-4
allele num: 119466
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.510+37T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422756
  ensembl transcript: ENST00000509013
  gene symbol: SSBP2
  hgvsc: ENST00000509013.2:c.558+37T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000504174
  gene symbol: SSBP2
  hgvsc: ENST00000504174.1:n.607+37T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.480+37T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.570+37T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.498+37T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.638+37T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.288+37T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.480+37T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507472
  gene symbol: SSBP2
  hgvsc: ENST00000507472.1:n.513+37T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.480+37T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.288+37T>C
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3628
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19452
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15026
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1638
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3743
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3226
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7515
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: DP

5-80769483-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80769483
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80769483
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 119318
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.638+36A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.480+36A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.288+36A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.498+36A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000504174
  gene symbol: SSBP2
  hgvsc: ENST00000504174.1:n.607+36A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422756
  ensembl transcript: ENST00000509013
  gene symbol: SSBP2
  hgvsc: ENST00000509013.2:c.558+36A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507472
  gene symbol: SSBP2
  hgvsc: ENST00000507472.1:n.513+36A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.288+36A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.480+36A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.510+36A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.570+36A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.480+36A>T
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: intron
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3237
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19559
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1396
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3500
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3498
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15153
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7637
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: T
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum

5-80769483-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80769483
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80769483
    reference: chr 5
allele count: 26
allele frequency: 2.179050939506193e-4
allele num: 119318
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.498+36A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422756
  ensembl transcript: ENST00000509013
  gene symbol: SSBP2
  hgvsc: ENST00000509013.2:c.558+36A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.638+36A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.510+36A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.480+36A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.570+36A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.480+36A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000504174
  gene symbol: SSBP2
  hgvsc: ENST00000504174.1:n.607+36A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507472
  gene symbol: SSBP2
  hgvsc: ENST00000507472.1:n.513+36A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.480+36A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.288+36A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.288+36A>G
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15153
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7637
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3500
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3498
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19559
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1396
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3237
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: African
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

5-80769484-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80769484
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80769484
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 119192
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422756
  ensembl transcript: ENST00000509013
  gene symbol: SSBP2
  hgvsc: ENST00000509013.2:c.558+35T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000504174
  gene symbol: SSBP2
  hgvsc: ENST00000504174.1:n.607+35T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.480+35T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.288+35T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.638+35T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.498+35T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.480+35T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507472
  gene symbol: SSBP2
  hgvsc: ENST00000507472.1:n.513+35T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.510+35T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.480+35T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.570+35T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.288+35T>C
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3343
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1645
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15228
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3251
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7697
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum

5-80769485-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80769485
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80769485
    reference: chr 5
allele count: 1
allele frequency: 8.365820603342981e-6
allele num: 119534
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.288+34A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.480+34A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.570+34A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.288+34A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507472
  gene symbol: SSBP2
  hgvsc: ENST00000507472.1:n.513+34A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.638+34A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.510+34A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422756
  ensembl transcript: ENST00000509013
  gene symbol: SSBP2
  hgvsc: ENST00000509013.2:c.558+34A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000504174
  gene symbol: SSBP2
  hgvsc: ENST00000504174.1:n.607+34A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.480+34A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.480+34A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.498+34A>T
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20301
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15404
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1638
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2804
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3245
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7640
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3215
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

5-80769493-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80769493
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80769493
    reference: chr 5
allele count: 1
allele frequency: 8.349475652928997e-6
allele num: 119768
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.480+26T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507472
  gene symbol: SSBP2
  hgvsc: ENST00000507472.1:n.513+26T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.288+26T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.638+26T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.570+26T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.480+26T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422756
  ensembl transcript: ENST00000509013
  gene symbol: SSBP2
  hgvsc: ENST00000509013.2:c.558+26T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.288+26T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.498+26T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.480+26T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000504174
  gene symbol: SSBP2
  hgvsc: ENST00000504174.1:n.607+26T>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.510+26T>C
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1639
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16186
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22472
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3267
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7818
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum

5-80769494-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80769494
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80769494
    reference: chr 5
allele count: 354
allele frequency: 2.955072875102259e-3
allele num: 119794
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.480+25A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.638+25A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.288+25A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.498+25A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.288+25A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507472
  gene symbol: SSBP2
  hgvsc: ENST00000507472.1:n.513+25A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.480+25A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.480+25A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422756
  ensembl transcript: ENST00000509013
  gene symbol: SSBP2
  hgvsc: ENST00000509013.2:c.558+25A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.510+25A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.570+25A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000504174
  gene symbol: SSBP2
  hgvsc: ENST00000504174.1:n.607+25A>G
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16216
  bin: 2.75e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 5.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 6.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 4.75e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 7816
  bin: 3.25e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 1658
  bin: 4.25e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 22556
  bin: 2.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 1783
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 1.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 6.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 3285
  bin: 3.75e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 5.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 6
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

5-80769504-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80769504
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80769504
    reference: chr 5
allele count: 1
allele frequency: 8.320990530712775e-6
allele num: 120178
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000504174
  gene symbol: SSBP2
  hgvsc: ENST00000504174.1:n.607+15C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.570+15C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422756
  ensembl transcript: ENST00000509013
  gene symbol: SSBP2
  hgvsc: ENST00000509013.2:c.558+15C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.288+15C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.480+15C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.498+15C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.510+15C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.638+15C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.480+15C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507472
  gene symbol: SSBP2
  hgvsc: ENST00000507472.1:n.513+15C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.480+15C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.288+15C>T
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16884
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7953
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23628
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3291
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1394
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ClippingRankSum

5-80769508-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80769508
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80769508
    reference: chr 5
allele count: 1
allele frequency: 8.306475728477921e-6
allele num: 120388
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.638+11A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000504174
  gene symbol: SSBP2
  hgvsc: ENST00000504174.1:n.607+11A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.288+11A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.510+11A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.480+11A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.288+11A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422756
  ensembl transcript: ENST00000509013
  gene symbol: SSBP2
  hgvsc: ENST00000509013.2:c.558+11A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.570+11A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.480+11A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507472
  gene symbol: SSBP2
  hgvsc: ENST00000507472.1:n.513+11A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.480+11A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.498+11A>G
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7952
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3292
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1640
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17109
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1394
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

5-80769509-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80769509
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80769509
    reference: chr 5
allele count: 1
allele frequency: 8.303165166561494e-6
allele num: 120436
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422756
  ensembl transcript: ENST00000509013
  gene symbol: SSBP2
  hgvsc: ENST00000509013.2:c.558+10C>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.570+10C>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.480+10C>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507472
  gene symbol: SSBP2
  hgvsc: ENST00000507472.1:n.513+10C>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.638+10C>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.288+10C>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.498+10C>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.480+10C>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.288+10C>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000504174
  gene symbol: SSBP2
  hgvsc: ENST00000504174.1:n.607+10C>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.480+10C>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.510+10C>A
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23882
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3295
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17141
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1394
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1646
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7967
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

5-80769524-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80769524
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80769524
    reference: chr 5
allele count: 3
allele frequency: 2.482292976765738e-5
allele num: 120856
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000512098
  gene symbol: SSBP2
  hgvsc: ENST00000512098.1:n.561C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000504174
  gene symbol: SSBP2
  hgvsc: ENST00000504174.1:n.602C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.565C>T
  hgvsp: ENSP00000322977.4:p.Pro189Ser
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.633C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.475C>T
  hgvsp: ENSP00000422961.1:p.Pro159Ser
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.505C>T
  hgvsp: ENSP00000423969.1:p.Pro169Ser
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.493C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507472
  gene symbol: SSBP2
  hgvsc: ENST00000507472.1:n.508C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.283C>T
  hgvsp: ENSP00000425146.1:p.Pro95Ser
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.283C>T
  hgvsp: ENSP00000424561.1:p.Pro95Ser
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.475C>T
  hgvsp: ENSP00000424657.1:p.Pro159Ser
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.475C>T
  hgvsp: ENSP00000426183.1:p.Pro159Ser
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422756
  ensembl transcript: ENST00000509013
  gene symbol: SSBP2
  hgvsc: ENST00000509013.2:c.553C>T
  hgvsp: ENSP00000422756.2:p.Pro185Ser
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17458
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24197
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8017
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro189Ser
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum

5-80769531-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80769531
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80769531
    reference: chr 5
allele count: 2
allele frequency: 1.652919882973272e-5
allele num: 120998
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.626C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.468C>T
  hgvsp: ENST00000515395.1:c.468C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000512098
  gene symbol: SSBP2
  hgvsc: ENST00000512098.1:n.554C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.498C>T
  hgvsp: ENST00000505980.1:c.498C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.276C>T
  hgvsp: ENST00000512923.1:c.276C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.468C>T
  hgvsp: ENST00000514493.1:c.468C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.276C>T
  hgvsp: ENST00000504985.1:c.276C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.486C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.558C>T
  hgvsp: ENST00000320672.4:c.558C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422756
  ensembl transcript: ENST00000509013
  gene symbol: SSBP2
  hgvsc: ENST00000509013.2:c.546C>T
  hgvsp: ENST00000509013.2:c.546C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507472
  gene symbol: SSBP2
  hgvsc: ENST00000507472.1:n.501C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.468C>T
  hgvsp: ENST00000509053.1:c.468C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000504174
  gene symbol: SSBP2
  hgvsc: ENST00000504174.1:n.595C>T
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3296
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24247
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1394
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8031
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17554
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro186Pro
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD

5-80769539-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80769539
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80769539
    reference: chr 5
allele count: 1
allele frequency: 8.260639703938672e-6
allele num: 121056
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422756
  ensembl transcript: ENST00000509013
  gene symbol: SSBP2
  hgvsc: ENST00000509013.2:c.538A>T
  hgvsp: ENSP00000422756.2:p.Met180Leu
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507472
  gene symbol: SSBP2
  hgvsc: ENST00000507472.1:n.493A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.460A>T
  hgvsp: ENSP00000422961.1:p.Met154Leu
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.490A>T
  hgvsp: ENSP00000423969.1:p.Met164Leu
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.460A>T
  hgvsp: ENSP00000424657.1:p.Met154Leu
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.550A>T
  hgvsp: ENSP00000322977.4:p.Met184Leu
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.268A>T
  hgvsp: ENSP00000425146.1:p.Met90Leu
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.460A>T
  hgvsp: ENSP00000426183.1:p.Met154Leu
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000512098
  gene symbol: SSBP2
  hgvsc: ENST00000512098.1:n.546A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.268A>T
  hgvsp: ENSP00000424561.1:p.Met90Leu
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.618A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.478A>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000504174
  gene symbol: SSBP2
  hgvsc: ENST00000504174.1:n.587A>T
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1642
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24230
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17630
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8046
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3292
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met184Leu
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

5-80769554-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80769554
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80769554
    reference: chr 5
allele count: 1
allele frequency: 8.256411103221652e-6
allele num: 121118
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.253A>C
  hgvsp: ENSP00000425146.1:p.Thr85Pro
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.445A>C
  hgvsp: ENSP00000426183.1:p.Thr149Pro
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.603A>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.445A>C
  hgvsp: ENSP00000422961.1:p.Thr149Pro
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.445A>C
  hgvsp: ENSP00000424657.1:p.Thr149Pro
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.253A>C
  hgvsp: ENSP00000424561.1:p.Thr85Pro
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.535A>C
  hgvsp: ENSP00000322977.4:p.Thr179Pro
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.475A>C
  hgvsp: ENSP00000423969.1:p.Thr159Pro
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422756
  ensembl transcript: ENST00000509013
  gene symbol: SSBP2
  hgvsc: ENST00000509013.2:c.523A>C
  hgvsp: ENSP00000422756.2:p.Thr175Pro
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507472
  gene symbol: SSBP2
  hgvsc: ENST00000507472.1:n.478A>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000512098
  gene symbol: SSBP2
  hgvsc: ENST00000512098.1:n.531A>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000504174
  gene symbol: SSBP2
  hgvsc: ENST00000504174.1:n.572A>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.463A>C
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8067
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24183
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17714
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr179Pro
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
reference allele: T
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

5-80769561-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80769561
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80769561
    reference: chr 5
allele count: 1
allele frequency: 8.25559316436886e-6
allele num: 121130
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.438G>A
  hgvsp: ENST00000509053.1:c.438G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507472
  gene symbol: SSBP2
  hgvsc: ENST00000507472.1:n.471G>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.438G>A
  hgvsp: ENST00000515395.1:c.438G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.456G>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.596G>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.438G>A
  hgvsp: ENST00000514493.1:c.438G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.528G>A
  hgvsp: ENST00000320672.4:c.528G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.468G>A
  hgvsp: ENST00000505980.1:c.468G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.246G>A
  hgvsp: ENST00000504985.1:c.246G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000504174
  gene symbol: SSBP2
  hgvsc: ENST00000504174.1:n.565G>A
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422756
  ensembl transcript: ENST00000509013
  gene symbol: SSBP2
  hgvsc: ENST00000509013.2:c.516G>A
  hgvsp: ENST00000509013.2:c.516G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.246G>A
  hgvsp: ENST00000512923.1:c.246G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000512098
  gene symbol: SSBP2
  hgvsc: ENST00000512098.1:n.524G>A
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8066
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1394
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17732
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24168
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln176Gln
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

5-80769569-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80769569
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80769569
    reference: chr 5
allele count: 1
allele frequency: 8.255729476256522e-6
allele num: 121128
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507472
  gene symbol: SSBP2
  hgvsc: ENST00000507472.1:n.463C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000512098
  gene symbol: SSBP2
  hgvsc: ENST00000512098.1:n.516C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.460C>T
  hgvsp: ENSP00000423969.1:p.Pro154Ser
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422756
  ensembl transcript: ENST00000509013
  gene symbol: SSBP2
  hgvsc: ENST00000509013.2:c.508C>T
  hgvsp: ENSP00000422756.2:p.Pro170Ser
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000504174
  gene symbol: SSBP2
  hgvsc: ENST00000504174.1:n.557C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.238C>T
  hgvsp: ENSP00000425146.1:p.Pro80Ser
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.430C>T
  hgvsp: ENSP00000424657.1:p.Pro144Ser
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.238C>T
  hgvsp: ENSP00000424561.1:p.Pro80Ser
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.448C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.520C>T
  hgvsp: ENSP00000322977.4:p.Pro174Ser
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.430C>T
  hgvsp: ENSP00000422961.1:p.Pro144Ser
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.430C>T
  hgvsp: ENSP00000426183.1:p.Pro144Ser
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.588C>T
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17754
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24123
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8082
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1394
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Pro174Ser
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

5-80769570-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80769570
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80769570
    reference: chr 5
allele count: 3
allele frequency: 2.476637057094739e-5
allele num: 121132
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.429G>C
  hgvsp: ENST00000514493.1:c.429G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000504174
  gene symbol: SSBP2
  hgvsc: ENST00000504174.1:n.556G>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507472
  gene symbol: SSBP2
  hgvsc: ENST00000507472.1:n.462G>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.429G>C
  hgvsp: ENST00000515395.1:c.429G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.447G>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.587G>C
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.459G>C
  hgvsp: ENST00000505980.1:c.459G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.519G>C
  hgvsp: ENST00000320672.4:c.519G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422756
  ensembl transcript: ENST00000509013
  gene symbol: SSBP2
  hgvsc: ENST00000509013.2:c.507G>C
  hgvsp: ENST00000509013.2:c.507G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.237G>C
  hgvsp: ENST00000504985.1:c.237G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.237G>C
  hgvsp: ENST00000512923.1:c.237G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.429G>C
  hgvsp: ENST00000509053.1:c.429G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000512098
  gene symbol: SSBP2
  hgvsc: ENST00000512098.1:n.515G>C
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8079
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24111
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3296
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly173Gly
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ

http://identifiers.org/exac.variant/5-80769576-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80769576
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80769576
    reference: chr 5
allele count: 1
allele frequency: 8.255865792645674e-6
allele num: 121126
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000512098
  gene symbol: SSBP2
  hgvsc: ENST00000512098.1:n.509G>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.423G>T
  hgvsp: ENSP00000424657.1:p.Met141Ile
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.231G>T
  hgvsp: ENSP00000425146.1:p.Met77Ile
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.423G>T
  hgvsp: ENSP00000426183.1:p.Met141Ile
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.581G>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.513G>T
  hgvsp: ENSP00000322977.4:p.Met171Ile
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.423G>T
  hgvsp: ENSP00000422961.1:p.Met141Ile
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.231G>T
  hgvsp: ENSP00000424561.1:p.Met77Ile
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422756
  ensembl transcript: ENST00000509013
  gene symbol: SSBP2
  hgvsc: ENST00000509013.2:c.501G>T
  hgvsp: ENSP00000422756.2:p.Met167Ile
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.441G>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.453G>T
  hgvsp: ENSP00000423969.1:p.Met151Ile
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000504174
  gene symbol: SSBP2
  hgvsc: ENST00000504174.1:n.550G>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507472
  gene symbol: SSBP2
  hgvsc: ENST00000507472.1:n.456G>T
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1645
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1394
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17775
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8071
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24073
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3302
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met171Ile
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

5-80769581-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80769581
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80769581
    reference: chr 5
allele count: 1
allele frequency: 8.256683785524381e-6
allele num: 121114
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.226A>G
  hgvsp: ENSP00000425146.1:p.Asn76Asp
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.418A>G
  hgvsp: ENSP00000422961.1:p.Asn140Asp
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000504174
  gene symbol: SSBP2
  hgvsc: ENST00000504174.1:n.545A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.448A>G
  hgvsp: ENSP00000423969.1:p.Asn150Asp
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.508A>G
  hgvsp: ENSP00000322977.4:p.Asn170Asp
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507472
  gene symbol: SSBP2
  hgvsc: ENST00000507472.1:n.451A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422756
  ensembl transcript: ENST00000509013
  gene symbol: SSBP2
  hgvsc: ENST00000509013.2:c.496A>G
  hgvsp: ENSP00000422756.2:p.Asn166Asp
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.226A>G
  hgvsp: ENSP00000424561.1:p.Asn76Asp
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000512098
  gene symbol: SSBP2
  hgvsc: ENST00000512098.1:n.504A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.418A>G
  hgvsp: ENSP00000426183.1:p.Asn140Asp
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.418A>G
  hgvsp: ENSP00000424657.1:p.Asn140Asp
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.436A>G
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.576A>G
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8070
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1645
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24008
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn170Asp
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

5-80769584-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80769584
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80769584
    reference: chr 5
allele count: 8
allele frequency: 6.606437973805473e-5
allele num: 121094
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.433C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507472
  gene symbol: SSBP2
  hgvsc: ENST00000507472.1:n.448C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.223C>T
  hgvsp: ENSP00000425146.1:p.Pro75Ser
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.415C>T
  hgvsp: ENSP00000426183.1:p.Pro139Ser
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.415C>T
  hgvsp: ENSP00000424657.1:p.Pro139Ser
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.573C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.223C>T
  hgvsp: ENSP00000424561.1:p.Pro75Ser
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.505C>T
  hgvsp: ENSP00000322977.4:p.Pro169Ser
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000504174
  gene symbol: SSBP2
  hgvsc: ENST00000504174.1:n.542C>T
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.445C>T
  hgvsp: ENSP00000423969.1:p.Pro149Ser
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422756
  ensembl transcript: ENST00000509013
  gene symbol: SSBP2
  hgvsc: ENST00000509013.2:c.493C>T
  hgvsp: ENSP00000422756.2:p.Pro165Ser
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.415C>T
  hgvsp: ENSP00000422961.1:p.Pro139Ser
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000512098
  gene symbol: SSBP2
  hgvsc: ENST00000512098.1:n.501C>T
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23957
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1646
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17802
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3304
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8068
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1396
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro169Ser
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: European (Finnish)
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

5-80769591-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80769591
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 80769592
    reference: chr 5
allele count: 23
allele frequency: 1.900669366168085e-4
allele num: 121010
alternate allele: TA
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507655
  gene symbol: SSBP2
  hgvsc: ENST00000507655.1:n.568-3dupT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422961
  ensembl transcript: ENST00000509053
  gene symbol: SSBP2
  hgvsc: ENST00000509053.1:c.410-3dupT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000512098
  gene symbol: SSBP2
  hgvsc: ENST00000512098.1:n.496-3dupT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000426183
  ensembl transcript: ENST00000514493
  gene symbol: SSBP2
  hgvsc: ENST00000514493.1:c.410-3dupT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000509743
  gene symbol: SSBP2
  hgvsc: ENST00000509743.2:n.428-3dupT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424561
  ensembl transcript: ENST00000512923
  gene symbol: SSBP2
  hgvsc: ENST00000512923.1:c.218-3dupT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000423969
  ensembl transcript: ENST00000505980
  gene symbol: SSBP2
  hgvsc: ENST00000505980.1:c.440-3dupT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000425146
  ensembl transcript: ENST00000504985
  gene symbol: SSBP2
  hgvsc: ENST00000504985.1:c.218-3dupT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000422756
  ensembl transcript: ENST00000509013
  gene symbol: SSBP2
  hgvsc: ENST00000509013.2:c.488-3dupT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000507472
  gene symbol: SSBP2
  hgvsc: ENST00000507472.1:n.443-3dupT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000424657
  ensembl transcript: ENST00000515395
  gene symbol: SSBP2
  hgvsc: ENST00000515395.1:c.410-3dupT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl transcript: ENST00000504174
  gene symbol: SSBP2
  hgvsc: ENST00000504174.1:n.537-3dupT
  variant of: http://identifiers.org/hgnc/15831
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145687
  ensembl protein: ENSP00000322977
  ensembl transcript: ENST00000320672
  gene symbol: SSBP2
  hgvsc: ENST00000320672.4:c.500-3dupT
  variant of: http://identifiers.org/hgnc/15831
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8118
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23652
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17833
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: c.500-3dupT
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD

GenotypeQuality
all individuals: 588
bin: 7.25e1
variant carriers: 389

GenotypeQuality
all individuals: 635
bin: 5.75e1
variant carriers: 583

GenotypeQuality
all individuals: 7240
bin: 9.75e1
variant carriers: 5751

GenotypeQuality
all individuals: 512
bin: 5.25e1
variant carriers: 442

GenotypeQuality
all individuals: 471
bin: 3.75e1
variant carriers: 262

GenotypeQuality
all individuals: 586
bin: 7.75e1
variant carriers: 334

GenotypeQuality
all individuals: 13479
bin: 7.5e0
variant carriers: 1596

GenotypeQuality
all individuals: 1360
bin: 6.25e1
variant carriers: 529

GenotypeQuality
all individuals: 908
bin: 6.75e1
variant carriers: 602

GenotypeQuality
all individuals: 557
bin: 8.25e1
variant carriers: 337

GenotypeQuality
all individuals: 392
bin: 4.75e1
variant carriers: 276

GenotypeQuality
all individuals: 9428
bin: 2.25e1
variant carriers: 856

GenotypeQuality
all individuals: 644
bin: 8.75e1
variant carriers: 472

GenotypeQuality
all individuals: 550
bin: 9.25e1
variant carriers: 354

East Asian
type: Population
allele count: 158
allele frequency: 2.025641025641026e-1
allele num: 780
num of homozygotes: 6

European (Non-Finnish)
type: Population
allele count: 3117
allele frequency: 3.263874345549738e-1
allele num: 9550
num of homozygotes: 300

Latino
type: Population
allele count: 528
allele frequency: 3.482849604221636e-1
allele num: 1516
num of homozygotes: 32

European (Finnish)
type: Population
allele count: 215
allele frequency: 2.674129353233831e-1
allele num: 804
num of homozygotes: 19

African
type: Population
allele count: 1197
allele frequency: 7.490613266583229e-1
allele num: 1598
num of homozygotes: 432

South Asian
type: Population
allele count: 2454
allele frequency: 3.023656973878758e-1
allele num: 8116
num of homozygotes: 317

Other
type: Population
allele count: 65
allele frequency: 2.708333333333333e-1
allele num: 240
num of homozygotes: 6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.889999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.482e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.12e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.0e0

FS
type: SiteQuality
SIO_000300: 1.596e0

QD
type: SiteQuality
SIO_000300: 1.56e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 6.53474e5

GenotypeQuality
all individuals: 386
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 851
bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 9428
bin: 2.25e1
variant carriers: 4

GenotypeQuality
all individuals: 550
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 392
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 471
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 13479
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 586
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 644
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 588
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1360
bin: 6.25e1
variant carriers: 3

GenotypeQuality
all individuals: 908
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 635
bin: 5.75e1
variant carriers: 4

GenotypeQuality
all individuals: 7240
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 6.282722513089005e-4
allele num: 9550
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 3.298153034300792e-3
allele num: 1516
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 6.160670280926564e-4
allele num: 8116
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1598
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 4.166666666666667e-3
allele num: 240
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.482e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 6.53474e5

VQSLOD
type: SiteQuality
SIO_000300: 2.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.889999999999999e-1

FS
type: SiteQuality
SIO_000300: 1.596e0

MQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

QD
type: SiteQuality
SIO_000300: 1.56e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.12e-1

GenotypeQuality
all individuals: 232
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 12724
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16746
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3500
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1548
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 468
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1132
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 346
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 395
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4896
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8326
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2276
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11866
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 940
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 260
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 958
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.236e1

MQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.31e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.54e0

QD
type: SiteQuality
SIO_000300: 4.11e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.67e-2

DP
type: SiteQuality
SIO_000300: 7.13282e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.370000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

GenotypeQuality
all individuals: 1062
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13749
bin: 2.25e1
variant carriers: 5

GenotypeQuality
all individuals: 414
bin: 7.75e1
variant carriers: 3

GenotypeQuality
all individuals: 303
bin: 9.25e1
variant carriers: 3

GenotypeQuality
all individuals: 16909
bin: 7.5e0
variant carriers: 3

GenotypeQuality
all individuals: 355
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 76
bin: 5.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1910
bin: 3.25e1
variant carriers: 2

GenotypeQuality
all individuals: 4969
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 243
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 347
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4974
bin: 9.75e1
variant carriers: 31

GenotypeQuality
all individuals: 280
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 479
bin: 4.75e1
variant carriers: 2

South Asian
type: Population
allele count: 11
allele frequency: 1.306723687336659e-3
allele num: 8418
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 3.894080996884735e-4
allele num: 2568
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.020408163265306e-3
allele num: 980
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 9.043077934889839e-4
allele num: 12164
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 3.759398496240601e-3
allele num: 266
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 1.270110076206604e-3
allele num: 2362
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 978
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.22038e5

VQSLOD
type: SiteQuality
SIO_000300: 3.52e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.64e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

QD
type: SiteQuality
SIO_000300: 1.006e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.22e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 369
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5115
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1828
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 258
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variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 360
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2223
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2228
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 460
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 318
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2030
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15375
bin: 7.5e0
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1336
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8794
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2852
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1174
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 3.232062055591467e-4
allele num: 3094
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14744
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 302
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.73e-2

DP
type: SiteQuality
SIO_000300: 7.98854e5

MQRankSum
type: SiteQuality
SIO_000300: 4.67e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.56e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.67e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.56e-1

MQ
type: SiteQuality
SIO_000300: 5.833e1

VQSLOD
type: SiteQuality
SIO_000300: -1.602e0

QD
type: SiteQuality
SIO_000300: 1.98e1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 350
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4784
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10874
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 1104
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 882
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 895
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5124
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 323
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28715
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2113
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 493
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 330
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.94106463878327e-5
allele num: 16832
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3236
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1306
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8920
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1638
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -7.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

QD
type: SiteQuality
SIO_000300: 7.02e0

FS
type: SiteQuality
SIO_000300: 1.5733e1

DP
type: SiteQuality
SIO_000300: 8.66464e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.73e-2

GenotypeQuality
all individuals: 1104
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 932
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10874
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 882
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 323
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2042
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 895
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28715
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2113
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4784
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 493
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 323
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3236
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16832
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1306
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 330
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8920
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.73e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

QD
type: SiteQuality
SIO_000300: 7.02e0

FS
type: SiteQuality
SIO_000300: 1.5733e1

MQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

DP
type: SiteQuality
SIO_000300: 8.66464e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -7.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.22e-1

GenotypeQuality
all individuals: 1267
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 545
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 14940
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 961
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 184
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3172
bin: 7.5e0
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GenotypeQuality
all individuals: 213
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 342
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29657
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 144
bin: 5.75e1
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GenotypeQuality
all individuals: 333
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 516
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 401
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3882
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9826
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6278
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 6
allele frequency: 2.566295979469632e-3
allele num: 2338
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 25
allele frequency: 9.332536956846349e-4
allele num: 26788
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4980
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 446
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.207e1

VQSLOD
type: SiteQuality
SIO_000300: 2.74e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.17e-1

FS
type: SiteQuality
SIO_000300: 6.53e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.061049e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.78e-1

GenotypeQuality
all individuals: 307
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24390
bin: 2.25e1
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GenotypeQuality
all individuals: 268
bin: 4.75e1
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GenotypeQuality
all individuals: 313
bin: 1.75e1
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GenotypeQuality
all individuals: 1647
bin: 6.75e1
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GenotypeQuality
all individuals: 22598
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 521
bin: 3.25e1
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GenotypeQuality
all individuals: 355
bin: 5.75e1
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GenotypeQuality
all individuals: 584
bin: 7.75e1
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GenotypeQuality
all individuals: 1472
bin: 7.5e0
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GenotypeQuality
all individuals: 446
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 477
bin: 5.25e1
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GenotypeQuality
all individuals: 738
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 434
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11124
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.238236750866766e-4
allele num: 8076
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.76640478034746e-5
allele num: 36148
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 590
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.12e-1

DP
type: SiteQuality
SIO_000300: 1.196135e6

BaseQRankSum
type: SiteQuality
SIO_000300: -9.419999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.056e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.69e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.15e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 4.309e0

QD
type: SiteQuality
SIO_000300: 2.361e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.4e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 586
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7954
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6802
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.706652952958372e-5
allele num: 36946
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 11342
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3714
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.661681621801263e-4
allele num: 6018
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.52e0

MQ
type: SiteQuality
SIO_000300: 5.906e1

ReadPosRankSum
type: SiteQuality
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VQSLOD
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MQRankSum
type: SiteQuality
SIO_000300: 5.29e-1

ClippingRankSum
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SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 5.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -8.32e-1

DP
type: SiteQuality
SIO_000300: 1.188095e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 35100
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3516
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 6522
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.77683013503909e-4
allele num: 5628
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7438
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 560
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.113103e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.7e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
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VQSLOD
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MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.376e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.41e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 1
allele frequency: 1.375137513751375e-4
allele num: 7272
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3464
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34424
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 5460
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10992
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6440
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 556
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.220000000000001e0

FS
type: SiteQuality
SIO_000300: 1.74e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.641e0

VQSLOD
type: SiteQuality
SIO_000300: 8.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.17e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.5e-2

MQRankSum
type: SiteQuality
SIO_000300: -3.87e-1

DP
type: SiteQuality
SIO_000300: 1.080814e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.917152858809801e-4
allele num: 3428
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 8.813160987074031e-5
allele num: 34040
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5404
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6366
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7166
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10936
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.619e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.57e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.53e-1

DP
type: SiteQuality
SIO_000300: 1.055274e6

QD
type: SiteQuality
SIO_000300: 1.061e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.800000000000001e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 9.879e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.41e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 6200
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.917913310318374e-4
allele num: 5214
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32550
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 534
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10650
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3278
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
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MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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DP
type: SiteQuality
SIO_000300: 1.000599e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 30682
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3114
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Other
type: Population
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allele frequency: 0.0e0
allele num: 506
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African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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VQSLOD
type: SiteQuality
SIO_000300: 2.18e-1

InbreedingCoeff
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MQ
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
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FS
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DP
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

Other
type: Population
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Latino
type: Population
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allele frequency: 1.636661211129296e-4
allele num: 6110
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African
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allele frequency: 0.0e0
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European (Finnish)
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num of homozygotes: 0

European (Non-Finnish)
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num of homozygotes: 0

South Asian
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MQ
type: SiteQuality
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DP
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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FS
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VQSLOD
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QD
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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South Asian
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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allele count: 0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 26956
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Other
type: Population
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allele num: 452
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African
type: Population
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allele frequency: 0.0e0
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DP
type: SiteQuality
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VQSLOD
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MQ
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QD
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InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
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FS
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BaseQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 337
bin: 9.25e1
variant carriers: 3

GenotypeQuality
all individuals: 12981
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 372
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 268
bin: 8.75e1
variant carriers: 5

GenotypeQuality
all individuals: 410
bin: 8.25e1
variant carriers: 4

GenotypeQuality
all individuals: 525
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 539
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2792
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 4.424778761061947e-3
allele num: 452
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 3.54735721887194e-4
allele num: 5638
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4174
num of homozygotes: 0

African
type: Population
allele count: 69
allele frequency: 1.277304701962236e-2
allele num: 5402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9934
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 1.483899688381065e-4
allele num: 26956
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.42e-1

FS
type: SiteQuality
SIO_000300: 2.309e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.85e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.883e0

DP
type: SiteQuality
SIO_000300: 9.47829e5

QD
type: SiteQuality
SIO_000300: 1.184e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.04e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 3116
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 565
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7797
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 912
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4880
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1751
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5759
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2234
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 691
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 754
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3166
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2223
bin: 9.75e1
variant carriers: 37

GenotypeQuality
all individuals: 1909
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2463
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 27
allele frequency: 5.513804933834341e-4
allele num: 48968
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7018
num of homozygotes: 0

Latino
type: Population
allele count: 14
allele frequency: 1.409869083585096e-3
allele num: 9930
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5052
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 742
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5078
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12964
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.001e1

VQSLOD
type: SiteQuality
SIO_000300: 3.4e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.32e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.6e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.1e0

DP
type: SiteQuality
SIO_000300: 1.003148e6

MQRankSum
type: SiteQuality
SIO_000300: 2.91e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.25e-1

GenotypeQuality
all individuals: 6004
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 473
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 917
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2857
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 325
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5714
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3165
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 758
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3172
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6752
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2586
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9131
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6108
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2191
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5086
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.038819115968031e-5
allele num: 49048
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9952
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12972
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7038
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 742
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5090
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.31e0

MQRankSum
type: SiteQuality
SIO_000300: 5.43e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.53e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.53e-1

MQ
type: SiteQuality
SIO_000300: 6.184e1

DP
type: SiteQuality
SIO_000300: 1.009962e6

QD
type: SiteQuality
SIO_000300: 2.454e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 4629
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3130
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 584
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 339
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20425
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3438
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1925
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2203
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 709
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5440
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10032
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5182
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13062
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5216
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7276
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.009944662763654e-5
allele num: 49876
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 752
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.6e0

VQSLOD
type: SiteQuality
SIO_000300: 6.38e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 9.88e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.12e-1

DP
type: SiteQuality
SIO_000300: 1.09372e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

QD
type: SiteQuality
SIO_000300: 1.17e1

GenotypeQuality
all individuals: 9989
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1911
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 899
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33136
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4288
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 470
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2213
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 606
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 487
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1382
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2431
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.873782041672913e-5
allele num: 53368
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8112
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13530
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6140
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5700
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.23e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.594e0

MQ
type: SiteQuality
SIO_000300: 5.448e1

VQSLOD
type: SiteQuality
SIO_000300: -3.621e0

DP
type: SiteQuality
SIO_000300: 1.233754e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.1e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.536e1

GenotypeQuality
all individuals: 263
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2214
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2029
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9359
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1668
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 628
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 902
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1032
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34594
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 452
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1150
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8276
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5802
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6390
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.330303474563847e-5
allele num: 13642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10424
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54296
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.38e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.347e0

VQSLOD
type: SiteQuality
SIO_000300: -1.377e0

DP
type: SiteQuality
SIO_000300: 1.258005e6

QD
type: SiteQuality
SIO_000300: 1.32e1

MQRankSum
type: SiteQuality
SIO_000300: -1.9e-1

MQ
type: SiteQuality
SIO_000300: 5.901e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.739e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

GenotypeQuality
all individuals: 291
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 605
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1092
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2221
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 211
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1006
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 349
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 941
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39002
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6118
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.101723413198823e-4
allele num: 14274
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10728
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.263467632412856e-4
allele num: 8836
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.476809679438147e-5
allele num: 57524
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.389274798555154e-4
allele num: 7198
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -4.127e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.82e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.138e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.91e-1

FS
type: SiteQuality
SIO_000300: 2.904e0

DP
type: SiteQuality
SIO_000300: 1.322251e6

QD
type: SiteQuality
SIO_000300: 2.143e1

GenotypeQuality
all individuals: 6146
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 800
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 664
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40353
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 889
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4840
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 963
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 60
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1107
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 240
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58764
num of homozygotes: 0

African
type: Population
allele count: 232
allele frequency: 2.546093064091308e-2
allele num: 9112
num of homozygotes: 3

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6210
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.207729468599034e-3
allele num: 828
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7446
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14576
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 7.389617587289858e-4
allele num: 10826
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.15e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.11e0

QD
type: SiteQuality
SIO_000300: 1.304e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.4e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.22e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.31e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.85e-1

DP
type: SiteQuality
SIO_000300: 1.348106e6

GenotypeQuality
all individuals: 2217
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 679
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41693
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4982
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1125
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 357
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59758
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.764984440535787e-5
allele num: 14782
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9250
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10926
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6280
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.45e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.99e-1

QD
type: SiteQuality
SIO_000300: 1.275e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.52e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 1.361947e6

VQSLOD
type: SiteQuality
SIO_000300: 5.639999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.8e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2947
bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.587956934607933e-5
allele num: 62974
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15528
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6420
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8250
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11162
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.342e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.07e0

VQSLOD
type: SiteQuality
SIO_000300: 2.2e0

MQRankSum
type: SiteQuality
SIO_000300: 1.26e-1

MQ
type: SiteQuality
SIO_000300: 5.914e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

DP
type: SiteQuality
SIO_000300: 1.410386e6

QD
type: SiteQuality
SIO_000300: 1.417e1

GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 97
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GenotypeQuality
all individuals: 1835
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10044
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11258
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6468
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.551445947623185e-5
allele num: 64456
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.25992188484314e-4
allele num: 15874
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8444
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.108e1

FS
type: SiteQuality
SIO_000300: 2.2742e1

DP
type: SiteQuality
SIO_000300: 1.434061e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -9.742e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.51e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.787e0

MQ
type: SiteQuality
SIO_000300: 5.333e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.182e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.0e-1

GenotypeQuality
all individuals: 1072
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 695
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15932
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10066
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.093102381688834e-5
allele num: 64660
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11276
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6476
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8474
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.126126126126126e-3
allele num: 888
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.61e-1

FS
type: SiteQuality
SIO_000300: 4.094e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.12e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.16e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.350000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.439e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

DP
type: SiteQuality
SIO_000300: 1.437451e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.14e0

GenotypeQuality
all individuals: 37
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 286
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 50
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.787346221441125e-5
allele num: 11380
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6520
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65722
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10234
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16212
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.45418e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: -3.223e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.11e-1

FS
type: SiteQuality
SIO_000300: 9.746e0

MQRankSum
type: SiteQuality
SIO_000300: 7.16e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.23e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.12e0

QD
type: SiteQuality
SIO_000300: 1.376e1

GenotypeQuality
all individuals: 290
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1175
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16244
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10254
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11384
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.038867110341265e-5
allele num: 65814
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.8e0

MQRankSum
type: SiteQuality
SIO_000300: 1.7e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.604e0

DP
type: SiteQuality
SIO_000300: 1.455573e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.51e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.95e1

FS
type: SiteQuality
SIO_000300: 8.04e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.76e0

QD
type: SiteQuality
SIO_000300: 1.385e1

GenotypeDepth
all individuals: 153
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variant carriers: 0

GenotypeDepth
all individuals: 54
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variant carriers: 0

GenotypeDepth
all individuals: 131
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variant carriers: 1

GenotypeQuality
all individuals: 5572
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variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 30
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variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
all individuals: 2223
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16424
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.612330198537095e-4
allele num: 11484
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66382
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.822e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.1e-3

FS
type: SiteQuality
SIO_000300: 2.118e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.76e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.66e-1

MQ
type: SiteQuality
SIO_000300: 5.918e1

QD
type: SiteQuality
SIO_000300: 1.232e1

MQRankSum
type: SiteQuality
SIO_000300: -4.32e-1

DP
type: SiteQuality
SIO_000300: 1.46692e6

VQSLOD
type: SiteQuality
SIO_000300: 5.23e-1

GenotypeDepth
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
all individuals: 689
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504257047444267e-5
allele num: 66478
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16454
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.01e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.4e-2

FS
type: SiteQuality
SIO_000300: 3.257e0

BaseQRankSum
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SIO_000300: 5.32e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.11e0

QD
type: SiteQuality
SIO_000300: 7.24e0

VQSLOD
type: SiteQuality
SIO_000300: -2.19e0

DP
type: SiteQuality
SIO_000300: 1.468968e6

MQ
type: SiteQuality
SIO_000300: 5.881e1

GenotypeDepth
all individuals: 741
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 26
bin: 4.75e1
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GenotypeQuality
all individuals: 2220
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 351
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
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GenotypeQuality
all individuals: 689
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1121
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1189
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504257047444267e-5
allele num: 66478
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16454
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.19e0

FS
type: SiteQuality
SIO_000300: 3.257e0

MQ
type: SiteQuality
SIO_000300: 5.881e1

DP
type: SiteQuality
SIO_000300: 1.468968e6

MQRankSum
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SIO_000300: 9.4e-2

ReadPosRankSum
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SIO_000300: 2.11e0

ClippingRankSum
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SIO_000300: -7.01e-1

BaseQRankSum
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SIO_000300: 5.32e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

QD
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SIO_000300: 7.24e0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66560
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 8.674531575294934e-5
allele num: 11528
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
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South Asian
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allele frequency: 0.0e0
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BaseQRankSum
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SIO_000300: -2.087e0

ReadPosRankSum
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VQSLOD
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MQRankSum
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FS
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InbreedingCoeff
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DP
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QD
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MQ
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ClippingRankSum
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SIO_000300: 6.71e-1

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.501817198810561e-5
allele num: 66586
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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South Asian
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Other
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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FS
type: SiteQuality
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MQRankSum
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BaseQRankSum
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DP
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ClippingRankSum
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InbreedingCoeff
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MQ
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ReadPosRankSum
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VQSLOD
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QD
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SIO_000300: 1.163e1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.652509652509652e-5
allele num: 10360
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66510
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South Asian
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Other
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InbreedingCoeff
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SIO_000300: -2.0e-4

MQRankSum
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QD
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VQSLOD
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DP
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FS
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ReadPosRankSum
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BaseQRankSum
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MQ
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SIO_000300: 5.962e1

ClippingRankSum
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SIO_000300: -3.39e-1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 66470
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Latino
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African
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South Asian
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East Asian
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Other
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DP
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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FS
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MQRankSum
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MQ
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QD
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ClippingRankSum
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SIO_000300: 7.19e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16258
num of homozygotes: 0

European (Non-Finnish)
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allele num: 65090
num of homozygotes: 0

Latino
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Other
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European (Finnish)
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East Asian
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African
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DP
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MQRankSum
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MQ
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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QD
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InbreedingCoeff
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BaseQRankSum
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FS
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African
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Other
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European (Non-Finnish)
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ReadPosRankSum
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DP
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InbreedingCoeff
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MQRankSum
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QD
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ClippingRankSum
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MQ
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FS
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BaseQRankSum
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VQSLOD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Latino
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South Asian
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East Asian
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Other
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African
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European (Finnish)
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MQRankSum
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MQ
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InbreedingCoeff
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QD
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DP
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BaseQRankSum
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FS
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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European (Non-Finnish)
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Latino
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Other
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num of homozygotes: 0

South Asian
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allele frequency: 6.203473945409429e-5
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African
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QD
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DP
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ReadPosRankSum
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MQ
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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MQRankSum
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SIO_000300: -4.9e-1

FS
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 6.191950464396285e-5
allele num: 16150
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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African
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East Asian
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Other
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European (Finnish)
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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FS
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MQ
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VQSLOD
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InbreedingCoeff
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QD
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MQRankSum
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 64146
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African
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East Asian
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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DP
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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MQ
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FS
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InbreedingCoeff
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QD
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VQSLOD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.565092183929633e-5
allele num: 63894
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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num of homozygotes: 0

Other
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African
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.71e-1

MQ
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DP
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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QD
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BaseQRankSum
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FS
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SIO_000300: 0.0e0

MQRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 1.177578897786152e-4
allele num: 8492
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 65462
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Latino
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num of homozygotes: 0

South Asian
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Other
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ReadPosRankSum
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QD
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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MQ
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DP
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MQRankSum
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VQSLOD
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FS
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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allele frequency: 0.0e0
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European (Finnish)
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Latino
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allele num: 11340
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South Asian
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European (Non-Finnish)
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Other
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VQSLOD
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FS
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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MQ
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DP
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ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele num: 11362
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 7.611740348313238e-5
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South Asian
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European (Finnish)
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African
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East Asian
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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QD
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VQSLOD
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FS
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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South Asian
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European (Finnish)
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European (Non-Finnish)
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East Asian
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Latino
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MQ
type: SiteQuality
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QD
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SIO_000300: 1.063e1

BaseQRankSum
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SIO_000300: 1.14e0

FS
type: SiteQuality
SIO_000300: 1.679e0

VQSLOD
type: SiteQuality
SIO_000300: -1.564e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.48e-1

DP
type: SiteQuality
SIO_000300: 1.799588e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.14e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.83e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 26

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 850
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variant carriers: 0

East Asian
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allele count: 21
allele frequency: 2.466525722339676e-3
allele num: 8514
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65594
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 3.07919694543663e-4
allele num: 16238
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11346
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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FS
type: SiteQuality
SIO_000300: 1.679e0

BaseQRankSum
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SIO_000300: 1.14e0

MQ
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SIO_000300: 5.635e1

QD
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InbreedingCoeff
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SIO_000300: 1.5e-3

ClippingRankSum
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SIO_000300: -3.14e-1

MQRankSum
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SIO_000300: -1.83e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.564e-1

DP
type: SiteQuality
SIO_000300: 1.799588e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.48e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10250
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11328
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6482
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16224
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.46e-1

BaseQRankSum
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SIO_000300: 1.11e0

QD
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SIO_000300: 1.42e0

VQSLOD
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SIO_000300: -1.517e0

InbreedingCoeff
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SIO_000300: -1.1e-3

MQ
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SIO_000300: 5.45e1

MQRankSum
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SIO_000300: -4.01e-1

DP
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SIO_000300: 1.804282e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.74e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 7244
bin: 6.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11368
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8534
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.150818058801821e-5
allele num: 16258
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10262
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65730
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -7.853e-1

BaseQRankSum
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SIO_000300: -1.162e0

FS
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SIO_000300: 0.0e0

ReadPosRankSum
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SIO_000300: -7.32e-1

ClippingRankSum
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SIO_000300: -6.889999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.807174e6

MQRankSum
type: SiteQuality
SIO_000300: 8.599999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.785e1

MQ
type: SiteQuality
SIO_000300: 5.923e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 508
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6500
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10270
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11386
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517911353976928e-5
allele num: 65880
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -4.95e-1

DP
type: SiteQuality
SIO_000300: 1.836414e6

QD
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BaseQRankSum
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SIO_000300: 3.84e0

MQ
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SIO_000300: 6.0e1

InbreedingCoeff
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SIO_000300: -2.0e-4

ReadPosRankSum
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VQSLOD
type: SiteQuality
SIO_000300: 9.599999999999999e-3

ClippingRankSum
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SIO_000300: -1.924e0

GenotypeDepth
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variant carriers: 49

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 344

GenotypeQuality
all individuals: 290
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.588865616367666e-5
allele num: 65886
num of homozygotes: 0

African
type: Population
allele count: 324
allele frequency: 3.153591590422426e-2
allele num: 10274
num of homozygotes: 6

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8556
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6502
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South Asian
type: Population
allele count: 1
allele frequency: 6.134969325153375e-5
allele num: 16300
num of homozygotes: 0

Latino
type: Population
allele count: 23
allele frequency: 2.019669827889006e-3
allele num: 11388
num of homozygotes: 0

Other
type: Population
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allele frequency: 1.126126126126126e-3
allele num: 888
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VQSLOD
type: SiteQuality
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MQRankSum
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MQ
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QD
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FS
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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DP
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ReadPosRankSum
type: SiteQuality
SIO_000300: 4.58e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
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allele frequency: 9.701202949165696e-5
allele num: 10308
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East Asian
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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FS
type: SiteQuality
SIO_000300: 1.1453e1

InbreedingCoeff
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BaseQRankSum
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MQRankSum
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QD
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ReadPosRankSum
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VQSLOD
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MQ
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DP
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ClippingRankSum
type: SiteQuality
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66238
num of homozygotes: 0

Latino
type: Population
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allele frequency: 8.759635599159075e-5
allele num: 11416
num of homozygotes: 0

African
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East Asian
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South Asian
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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MQ
type: SiteQuality
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BaseQRankSum
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FS
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VQSLOD
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QD
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MQRankSum
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DP
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ClippingRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

Other
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.508932882665379e-5
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num of homozygotes: 0

South Asian
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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InbreedingCoeff
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DP
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BaseQRankSum
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ClippingRankSum
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FS
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QD
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MQRankSum
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VQSLOD
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ReadPosRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.008514094888535e-5
allele num: 66478
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Latino
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Other
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QD
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MQ
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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FS
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ReadPosRankSum
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DP
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ClippingRankSum
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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Other
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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FS
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ClippingRankSum
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MQ
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MQRankSum
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QD
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DP
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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BaseQRankSum
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MQ
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FS
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MQRankSum
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QD
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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South Asian
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East Asian
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European (Non-Finnish)
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Latino
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European (Finnish)
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African
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QD
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FS
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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DP
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VQSLOD
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MQ
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ReadPosRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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Latino
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European (Finnish)
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African
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East Asian
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European (Non-Finnish)
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MQ
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BaseQRankSum
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VQSLOD
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FS
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InbreedingCoeff
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QD
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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South Asian
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Latino
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Other
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FS
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MQRankSum
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QD
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InbreedingCoeff
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VQSLOD
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DP
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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European (Non-Finnish)
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African
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South Asian
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DP
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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FS
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MQRankSum
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MQ
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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African
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South Asian
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European (Non-Finnish)
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European (Finnish)
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FS
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BaseQRankSum
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InbreedingCoeff
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MQ
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VQSLOD
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MQRankSum
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DP
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QD
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ClippingRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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European (Finnish)
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European (Non-Finnish)
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FS
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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VQSLOD
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DP
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BaseQRankSum
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MQ
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QD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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African
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East Asian
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European (Finnish)
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MQ
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FS
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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VQSLOD
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DP
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GenotypeDepth
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East Asian
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European (Finnish)
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African
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European (Non-Finnish)
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MQRankSum
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FS
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QD
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MQ
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VQSLOD
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