9-97054769-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97054769
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97054769
    reference: chr 9
allele count: 1
allele frequency: 8.371983992766606e-6
allele num: 119446
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.160+20G>A
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.160+20G>A
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.160+20G>A
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000175787
  ensembl transcript: ENST00000492115
  gene symbol: ZNF169
  hgvsc: ENST00000492115.2:n.260G>A
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.160+20G>A
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.160+20G>A
  variant of: http://identifiers.org/hgnc/12957
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8171
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8942
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1899
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7365
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2204
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2730
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9105
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6063
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2307
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4167
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4099
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 579
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 733
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7398
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1923
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2350
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum

9-97054770-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97054770
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97054770
    reference: chr 9
allele count: 6
allele frequency: 5.023442732752847e-5
allele num: 119440
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000175787
  ensembl transcript: ENST00000492115
  gene symbol: ZNF169
  hgvsc: ENST00000492115.2:n.261G>A
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.160+21G>A
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.160+21G>A
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.160+21G>A
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.160+21G>A
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.160+21G>A
  variant of: http://identifiers.org/hgnc/12957
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7321
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4167
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1899
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1963
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2730
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8938
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6063
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2266
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8170
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9084
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2307
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4029
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4097
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 594
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28465
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7336
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 757
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1955
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD

9-97054774-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97054774
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97054774
    reference: chr 9
allele count: 1
allele frequency: 8.38335401227323e-6
allele num: 119284
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.160+25C>G
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.160+25C>G
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000175787
  ensembl transcript: ENST00000492115
  gene symbol: ZNF169
  hgvsc: ENST00000492115.2:n.265C>G
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.160+25C>G
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.160+25C>G
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.160+25C>G
  variant of: http://identifiers.org/hgnc/12957
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7109
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2453
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6059
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2306
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8936
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2728
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9042
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8165
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4166
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1898
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6934
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4025
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2348
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4050
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 460
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4093
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 893
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: MQ

9-97054779-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97054779
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97054779
    reference: chr 9
allele count: 149
allele frequency: 1.250818488608318e-3
allele num: 119122
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.160+30T>G
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.160+30T>G
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.160+30T>G
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.160+30T>G
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000175787
  ensembl transcript: ENST00000492115
  gene symbol: ZNF169
  hgvsc: ENST00000492115.2:n.270T>G
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.160+30T>G
  variant of: http://identifiers.org/hgnc/12957
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1895
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 6.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 2603
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8165
  bin: 4.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 1647
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8942
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6880
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8911
  bin: 3.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 4171
  bin: 5.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 2718
  bin: 5.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 7.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 6063
  bin: 4.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2310
  bin: 9.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 8.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 726
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1018
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6536
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2017
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 580
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4044
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2340
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: Latino
population: European (Finnish)
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ

9-97054786-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97054786
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97054786
    reference: chr 9
allele count: 1
allele frequency: 8.426445556735258e-6
allele num: 118674
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.160+37G>C
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.160+37G>C
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000175787
  ensembl transcript: ENST00000492115
  gene symbol: ZNF169
  hgvsc: ENST00000492115.2:n.277G>C
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.160+37G>C
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.160+37G>C
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.160+37G>C
  variant of: http://identifiers.org/hgnc/12957
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1732
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8159
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8775
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4160
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8889
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2600
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6055
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6513
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2298
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2716
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1894
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1110
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4071
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4046
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2000
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 775
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6038
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3823
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

9-97054789-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97054789
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97054789
    reference: chr 9
allele count: 2
allele frequency: 1.688419133165617e-5
allele num: 118454
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.160+40G>A
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.160+40G>A
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000175787
  ensembl transcript: ENST00000492115
  gene symbol: ZNF169
  hgvsc: ENST00000492115.2:n.280G>A
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.160+40G>A
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.160+40G>A
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.160+40G>A
  variant of: http://identifiers.org/hgnc/12957
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8147
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2529
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2714
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8652
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6054
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8859
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2106
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6241
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4160
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1894
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2298
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 490
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5537
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3939
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1136
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4042
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2333
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: ReadPosRankSum

9-97055206-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055206
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055206
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 48052
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.161-50T>C
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.161-50T>C
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.161-50T>C
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.161-50T>C
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.161-50T>C
  variant of: http://identifiers.org/hgnc/12957
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2228
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25621
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12568
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1657
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10427
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4465
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8917
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
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genotype quality: GenotypeQuality
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  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3109
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1569
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5369
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1030
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 844
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2400
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1152
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4296
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP

9-97055207-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055207
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055207
    reference: chr 9
allele count: 2
allele frequency: 4.168056018672891e-5
allele num: 47984
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.161-49C>T
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.161-49C>T
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.161-49C>T
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.161-49C>T
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.161-49C>T
  variant of: http://identifiers.org/hgnc/12957
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1663
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12565
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25622
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10414
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2288
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5348
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8735
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3099
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5132
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7431
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1566
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4271
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1034
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 840
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14702
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2429
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum

9-97055210-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055210
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055210
    reference: chr 9
allele count: 4613
allele frequency: 9.453256280995123e-2
allele num: 48798
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.161-46A>T
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.161-46A>T
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.161-46A>T
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.161-46A>T
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.161-46A>T
  variant of: http://identifiers.org/hgnc/12957
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 3.25e1
  variant carriers: 100
genotype depth: GenotypeDepth
  all individuals: 2701
  bin: 2.25e1
  variant carriers: 413
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 12876
  bin: 1.25e1
  variant carriers: 2179
genotype depth: GenotypeDepth
  all individuals: 9409
  bin: 2.5e0
  variant carriers: 298
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 3.75e1
  variant carriers: 77
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 25552
  bin: 7.5e0
  variant carriers: 3004
genotype depth: GenotypeDepth
  all individuals: 1712
  bin: 2.75e1
  variant carriers: 165
genotype depth: GenotypeDepth
  all individuals: 4252
  bin: 1.75e1
  variant carriers: 989
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 9.75e1
  variant carriers: 131
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 4.75e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 6.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.25e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 4.25e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 3758
  bin: 2.75e1
  variant carriers: 123
genotype quality: GenotypeQuality
  all individuals: 4392
  bin: 3.25e1
  variant carriers: 83
genotype quality: GenotypeQuality
  all individuals: 552
  bin: 8.25e1
  variant carriers: 357
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 9.25e1
  variant carriers: 294
genotype quality: GenotypeQuality
  all individuals: 6741
  bin: 7.5e0
  variant carriers: 99
genotype quality: GenotypeQuality
  all individuals: 5418
  bin: 1.75e1
  variant carriers: 244
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 7.25e1
  variant carriers: 124
genotype quality: GenotypeQuality
  all individuals: 1300
  bin: 4.75e1
  variant carriers: 169
genotype quality: GenotypeQuality
  all individuals: 990
  bin: 4.25e1
  variant carriers: 72
genotype quality: GenotypeQuality
  all individuals: 726
  bin: 5.25e1
  variant carriers: 244
genotype quality: GenotypeQuality
  all individuals: 591
  bin: 8.75e1
  variant carriers: 491
genotype quality: GenotypeQuality
  all individuals: 2846
  bin: 6.25e1
  variant carriers: 77
genotype quality: GenotypeQuality
  all individuals: 840
  bin: 6.75e1
  variant carriers: 74
genotype quality: GenotypeQuality
  all individuals: 14796
  bin: 2.25e1
  variant carriers: 243
genotype quality: GenotypeQuality
  all individuals: 4136
  bin: 1.25e1
  variant carriers: 120
num of homozygotes: 231
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: A
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/9-97055226-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055226
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055226
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 52954
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.161-30A>C
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.161-30A>C
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.161-30A>C
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.161-30A>C
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.161-30A>C
  variant of: http://identifiers.org/hgnc/12957
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6235
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27491
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2180
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12356
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6334
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1979
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2318
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5750
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4903
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6909
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25532
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 629
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2065
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2088
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4403
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP

9-97055231-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055231
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055231
    reference: chr 9
allele count: 42
allele frequency: 7.565386555227322e-4
allele num: 55516
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.161-25C>G
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.161-25C>G
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.161-25C>G
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.161-25C>G
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.161-25C>G
  variant of: http://identifiers.org/hgnc/12957
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2917
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4422
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1728
  bin: 1.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 27969
  bin: 7.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11402
  bin: 1.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 8499
  bin: 2.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4342
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1478
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 520
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1835
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 8.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1184
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27533
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1242
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4329
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

9-97055234-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055234
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055234
    reference: chr 9
allele count: 1
allele frequency: 1.742281692103979e-5
allele num: 57396
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.161-22G>C
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.161-22G>C
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.161-22G>C
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.161-22G>C
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.161-22G>C
  variant of: http://identifiers.org/hgnc/12957
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3186
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27507
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11074
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9506
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4015
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2098
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10171
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4102
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3733
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 478
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 521
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 575
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1132
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1602
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ

9-97055235-G-GT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055235
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055236
    reference: chr 9
allele count: 940
allele frequency: 2.04152549735036e-2
allele num: 46044
alternate allele: GT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.161-12dupT
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.161-12dupT
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.161-12dupT
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.161-12dupT
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.161-12dupT
  variant of: http://identifiers.org/hgnc/12957
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2030
  bin: 3.25e1
  variant carriers: 60
genotype depth: GenotypeDepth
  all individuals: 8310
  bin: 2.25e1
  variant carriers: 171
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 4.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 6147
  bin: 1.75e1
  variant carriers: 287
genotype depth: GenotypeDepth
  all individuals: 3916
  bin: 2.75e1
  variant carriers: 91
genotype depth: GenotypeDepth
  all individuals: 12053
  bin: 1.25e1
  variant carriers: 380
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21766
  bin: 7.5e0
  variant carriers: 158
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2749
  bin: 2.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 4.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 3.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 9.75e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 3142
  bin: 3.25e1
  variant carriers: 55
genotype quality: GenotypeQuality
  all individuals: 19712
  bin: 2.25e1
  variant carriers: 33
genotype quality: GenotypeQuality
  all individuals: 665
  bin: 4.75e1
  variant carriers: 56
genotype quality: GenotypeQuality
  all individuals: 4213
  bin: 7.5e0
  variant carriers: 44
genotype quality: GenotypeQuality
  all individuals: 809
  bin: 4.25e1
  variant carriers: 55
genotype quality: GenotypeQuality
  all individuals: 2071
  bin: 1.25e1
  variant carriers: 59
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 5.75e1
  variant carriers: 45
genotype quality: GenotypeQuality
  all individuals: 1071
  bin: 6.75e1
  variant carriers: 38
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 9.25e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 3195
  bin: 2.75e1
  variant carriers: 51
genotype quality: GenotypeQuality
  all individuals: 10880
  bin: 2.5e0
  variant carriers: 32
genotype quality: GenotypeQuality
  all individuals: 6577
  bin: 6.25e1
  variant carriers: 43
genotype quality: GenotypeQuality
  all individuals: 2276
  bin: 9.75e1
  variant carriers: 490
genotype quality: GenotypeQuality
  all individuals: 565
  bin: 5.25e1
  variant carriers: 38
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 8.75e1
  variant carriers: 40
num of homozygotes: 5
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD

9-97055235-G-GTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055235
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055237
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 46044
alternate allele: GTT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.161-13_161-12dupTT
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.161-13_161-12dupTT
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.161-13_161-12dupTT
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.161-13_161-12dupTT
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.161-13_161-12dupTT
  variant of: http://identifiers.org/hgnc/12957
canonical: true
consequence: intron
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 6147
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3916
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2749
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8310
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21766
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12053
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2030
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6577
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1943
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3142
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4213
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10880
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3195
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19712
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2276
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 565
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 665
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 809
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: MQ

9-97055235-GT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055235
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055234
    reference: chr 9
allele count: 67
allele frequency: 1.455129875771002e-3
allele num: 46044
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.161-12delT
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.161-12delT
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.161-12delT
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.161-12delT
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.161-12delT
  variant of: http://identifiers.org/hgnc/12957
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12053
  bin: 1.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 2749
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 9.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 8310
  bin: 2.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21766
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3916
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6147
  bin: 1.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2030
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1071
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 665
  bin: 4.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 565
  bin: 5.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 3195
  bin: 2.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 7.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1634
  bin: 3.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 2276
  bin: 9.75e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 1943
  bin: 1.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 4213
  bin: 7.5e0
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2071
  bin: 1.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 10880
  bin: 2.5e0
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 19712
  bin: 2.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 8.75e1
  variant carriers: 2
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
reference allele: GT
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

9-97055236-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055236
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055236
    reference: chr 9
allele count: 3
allele frequency: 6.361592942872896e-5
allele num: 47158
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.161-20T>G
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.161-20T>G
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.161-20T>G
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.161-20T>G
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.161-20T>G
  variant of: http://identifiers.org/hgnc/12957
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8340
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11842
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21514
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6168
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4005
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2662
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2009
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10094
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4838
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 542
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2010
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20136
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6725
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3471
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1706
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3233
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1724
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1342
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: MQ

9-97055247-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055247
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055247
    reference: chr 9
allele count: 1
allele frequency: 1.27229700501285e-5
allele num: 78598
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.161-9T>C
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.161-9T>C
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.161-9T>C
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.161-9T>C
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.161-9T>C
  variant of: http://identifiers.org/hgnc/12957
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19758
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1264
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15139
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2121
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3963
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5011
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10209
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4094
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20069
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 999
  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 1288
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3070
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16416
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 679
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1188
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 871
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

9-97055264-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055264
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055264
    reference: chr 9
allele count: 1
allele frequency: 1.037279837354522e-5
allele num: 96406
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.169T>C
  hgvsp: ENSP00000474608.1:p.Phe57Leu
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.169T>C
  hgvsp: ENSP00000475038.1:p.Phe57Leu
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.169T>C
  hgvsp: ENSP00000364503.4:p.Phe57Leu
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.169T>C
  hgvsp: ENSP00000340711.4:p.Phe57Leu
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.169T>C
  hgvsp: ENSP00000378792.2:p.Phe57Leu
  variant of: http://identifiers.org/hgnc/12957
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29454
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6829
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5033
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12068
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2439
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 9.75e1
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genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.25e1
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genotype quality: GenotypeQuality
  all individuals: 438
  bin: 4.75e1
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genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1644
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 1183
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3552
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Phe57Leu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP

9-97055282-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055282
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055282
    reference: chr 9
allele count: 1
allele frequency: 9.400263207369806e-6
allele num: 106380
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.187A>G
  hgvsp: ENSP00000378792.2:p.Ile63Val
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.187A>G
  hgvsp: ENSP00000340711.4:p.Ile63Val
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.187A>G
  hgvsp: ENSP00000474608.1:p.Ile63Val
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.187A>G
  hgvsp: ENSP00000475038.1:p.Ile63Val
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.187A>G
  hgvsp: ENSP00000364503.4:p.Ile63Val
  variant of: http://identifiers.org/hgnc/12957
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7328
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 4.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 401
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ile63Val
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

9-97055283-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055283
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055283
    reference: chr 9
allele count: 2
allele frequency: 1.873676715819453e-5
allele num: 106742
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.188T>C
  hgvsp: ENSP00000340711.4:p.Ile63Thr
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.188T>C
  hgvsp: ENSP00000475038.1:p.Ile63Thr
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.188T>C
  hgvsp: ENSP00000474608.1:p.Ile63Thr
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.188T>C
  hgvsp: ENSP00000364503.4:p.Ile63Thr
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.188T>C
  hgvsp: ENSP00000378792.2:p.Ile63Thr
  variant of: http://identifiers.org/hgnc/12957
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7154
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35699
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2430
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 870
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1349
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ile63Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: African
population: South Asian
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ

9-97055284-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055284
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055284
    reference: chr 9
allele count: 5
allele frequency: 4.668882829716505e-5
allele num: 107092
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.189C>T
  hgvsp: ENST00000375354.4:c.189C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.189C>T
  hgvsp: ENST00000395395.2:c.189C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.189C>T
  hgvsp: ENST00000481550.2:c.189C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.189C>T
  hgvsp: ENST00000480716.1:c.189C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.189C>T
  hgvsp: ENST00000340911.4:c.189C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12957
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35686
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6919
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2836
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8447
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4119
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 870
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 951
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7328
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37704
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ile63Ile
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD

9-97055285-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055285
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055285
    reference: chr 9
allele count: 2
allele frequency: 1.859600185960019e-5
allele num: 107550
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.190G>A
  hgvsp: ENSP00000378792.2:p.Glu64Lys
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.190G>A
  hgvsp: ENSP00000340711.4:p.Glu64Lys
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.190G>A
  hgvsp: ENSP00000475038.1:p.Glu64Lys
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.190G>A
  hgvsp: ENSP00000364503.4:p.Glu64Lys
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.190G>A
  hgvsp: ENSP00000474608.1:p.Glu64Lys
  variant of: http://identifiers.org/hgnc/12957
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35711
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6715
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2891
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8595
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2297
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2485
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 940
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37702
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 837
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 642
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 580
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 932
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4174
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Glu64Lys
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
reference allele: G
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum

9-97055289-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055289
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055289
    reference: chr 9
allele count: 1
allele frequency: 9.188473978241693e-6
allele num: 108832
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.194A>T
  hgvsp: ENSP00000475038.1:p.Gln65Leu
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.194A>T
  hgvsp: ENSP00000364503.4:p.Gln65Leu
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.194A>T
  hgvsp: ENSP00000378792.2:p.Gln65Leu
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.194A>T
  hgvsp: ENSP00000340711.4:p.Gln65Leu
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.194A>T
  hgvsp: ENSP00000474608.1:p.Gln65Leu
  variant of: http://identifiers.org/hgnc/12957
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2116
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2862
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6163
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8834
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36166
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 963
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38120
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 713
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 770
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 618
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2493
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 850
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gln65Leu
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: African
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

9-97055294-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055294
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055294
    reference: chr 9
allele count: 1
allele frequency: 9.100837277029487e-6
allele num: 109880
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.199G>C
  hgvsp: ENSP00000378792.2:p.Glu67Gln
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.199G>C
  hgvsp: ENSP00000364503.4:p.Glu67Gln
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.199G>C
  hgvsp: ENSP00000474608.1:p.Glu67Gln
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.199G>C
  hgvsp: ENSP00000475038.1:p.Glu67Gln
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.199G>C
  hgvsp: ENSP00000340711.4:p.Glu67Gln
  variant of: http://identifiers.org/hgnc/12957
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1997
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5644
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36266
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2974
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9149
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1452
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 812
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 714
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38467
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 552
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1580
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 991
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 813
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Glu67Gln
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

9-97055296-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055296
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055296
    reference: chr 9
allele count: 3
allele frequency: 2.723904990193942e-5
allele num: 110136
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.201G>A
  hgvsp: ENST00000480716.1:c.201G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.201G>A
  hgvsp: ENST00000481550.2:c.201G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.201G>A
  hgvsp: ENST00000395395.2:c.201G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.201G>A
  hgvsp: ENST00000375354.4:c.201G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.201G>A
  hgvsp: ENST00000340911.4:c.201G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12957
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1977
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5522
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3006
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9283
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36183
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 433
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4400
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1610
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 710
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 612
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1463
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 818
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5923
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 551
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Glu67Glu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Other
reference allele: G
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff

9-97055302-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055302
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055302
    reference: chr 9
allele count: 10
allele frequency: 8.997498695362689e-5
allele num: 111142
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.207C>T
  hgvsp: ENST00000481550.2:c.207C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.207C>T
  hgvsp: ENST00000340911.4:c.207C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.207C>T
  hgvsp: ENST00000395395.2:c.207C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.207C>T
  hgvsp: ENST00000480716.1:c.207C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.207C>T
  hgvsp: ENST00000375354.4:c.207C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12957
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1845
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3126
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5005
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9608
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36424
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 701
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39140
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 345
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5446
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4461
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1488
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 653
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gly69Gly
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum

9-97055303-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055303
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055303
    reference: chr 9
allele count: 7
allele frequency: 6.290438533429188e-5
allele num: 111280
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.208G>A
  hgvsp: ENSP00000474608.1:p.Asp70Asn
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.208G>A
  hgvsp: ENSP00000340711.4:p.Asp70Asn
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.208G>A
  hgvsp: ENSP00000378792.2:p.Asp70Asn
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.208G>A
  hgvsp: ENSP00000364503.4:p.Asp70Asn
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.208G>A
  hgvsp: ENSP00000475038.1:p.Asp70Asn
  variant of: http://identifiers.org/hgnc/12957
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1855
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36356
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3127
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9664
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4961
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38955
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1502
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1674
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 648
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4501
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 507
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1061
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2521
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5411
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asp70Asn
num of homozygotes: 1
population: Other
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

9-97055305-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055305
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055305
    reference: chr 9
allele count: 26
allele frequency: 2.331211333273559e-4
allele num: 111530
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.210C>T
  hgvsp: ENST00000375354.4:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.210C>T
  hgvsp: ENST00000481550.2:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.210C>T
  hgvsp: ENST00000480716.1:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.210C>T
  hgvsp: ENST00000395395.2:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.210C>T
  hgvsp: ENST00000340911.4:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12957
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9738
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3163
  bin: 3.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 36369
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4831
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1848
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4514
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 626
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2544
  bin: 9.75e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 571
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1071
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 748
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asp70Asp
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

9-97055306-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055306
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055306
    reference: chr 9
allele count: 2
allele frequency: 1.792725121457127e-5
allele num: 111562
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.211G>A
  hgvsp: ENSP00000474608.1:p.Glu71Lys
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.211G>A
  hgvsp: ENSP00000378792.2:p.Glu71Lys
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.211G>A
  hgvsp: ENSP00000475038.1:p.Glu71Lys
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.211G>A
  hgvsp: ENSP00000364503.4:p.Glu71Lys
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.211G>A
  hgvsp: ENSP00000340711.4:p.Glu71Lys
  variant of: http://identifiers.org/hgnc/12957
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1892
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3178
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4789
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36163
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9848
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 630
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1508
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 775
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1079
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2523
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 615
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 919
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 460
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5286
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Glu71Lys
num of homozygotes: 1
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: QD

http://identifiers.org/exac.variant/9-97055309-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055309
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055309
    reference: chr 9
allele count: 1
allele frequency: 8.939586275947149e-6
allele num: 111862
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.214C>A
  hgvsp: ENSP00000340711.4:p.Pro72Thr
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.214C>A
  hgvsp: ENSP00000378792.2:p.Pro72Thr
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.214C>A
  hgvsp: ENSP00000364503.4:p.Pro72Thr
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.214C>A
  hgvsp: ENSP00000474608.1:p.Pro72Thr
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.214C>A
  hgvsp: ENSP00000475038.1:p.Pro72Thr
  variant of: http://identifiers.org/hgnc/12957
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4677
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1872
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9929
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36264
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3181
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1522
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5196
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1733
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38972
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 764
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4557
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2526
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Pro72Thr
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: South Asian
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQRankSum

9-97055310-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055310
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055310
    reference: chr 9
allele count: 21487
allele frequency: 1.861603507130356e-1
allele num: 115422
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.215C>T
  hgvsp: ENSP00000340711.4:p.Pro72Leu
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.215C>T
  hgvsp: ENSP00000475038.1:p.Pro72Leu
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.215C>T
  hgvsp: ENSP00000364503.4:p.Pro72Leu
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.215C>T
  hgvsp: ENSP00000474608.1:p.Pro72Leu
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.215C>T
  hgvsp: ENSP00000378792.2:p.Pro72Leu
  variant of: http://identifiers.org/hgnc/12957
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 4.25e1
  variant carriers: 1039
genotype depth: GenotypeDepth
  all individuals: 4412
  bin: 3.25e1
  variant carriers: 2359
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 6.25e1
  variant carriers: 264
genotype depth: GenotypeDepth
  all individuals: 2906
  bin: 1.75e1
  variant carriers: 2136
genotype depth: GenotypeDepth
  all individuals: 28184
  bin: 2.25e1
  variant carriers: 2851
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 4.75e1
  variant carriers: 663
genotype depth: GenotypeDepth
  all individuals: 10296
  bin: 2.75e1
  variant carriers: 2855
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 8.25e1
  variant carriers: 244
genotype depth: GenotypeDepth
  all individuals: 2805
  bin: 9.75e1
  variant carriers: 2613
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 215
genotype depth: GenotypeDepth
  all individuals: 2157
  bin: 1.25e1
  variant carriers: 1016
genotype depth: GenotypeDepth
  all individuals: 2605
  bin: 7.5e0
  variant carriers: 191
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 5.25e1
  variant carriers: 412
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.75e1
  variant carriers: 299
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 8.75e1
  variant carriers: 226
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.75e1
  variant carriers: 227
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 244
genotype depth: GenotypeDepth
  all individuals: 2212
  bin: 3.75e1
  variant carriers: 1686
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 9.25e1
  variant carriers: 223
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 2.5e0
  variant carriers: 28
genotype quality: GenotypeQuality
  all individuals: 539
  bin: 3.25e1
  variant carriers: 100
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 9.25e1
  variant carriers: 150
genotype quality: GenotypeQuality
  all individuals: 620
  bin: 8.25e1
  variant carriers: 191
genotype quality: GenotypeQuality
  all individuals: 501
  bin: 5.25e1
  variant carriers: 162
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 3.75e1
  variant carriers: 118
genotype quality: GenotypeQuality
  all individuals: 931
  bin: 7.25e1
  variant carriers: 131
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 1.75e1
  variant carriers: 35
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 1.25e1
  variant carriers: 37
genotype quality: GenotypeQuality
  all individuals: 1017
  bin: 7.75e1
  variant carriers: 174
genotype quality: GenotypeQuality
  all individuals: 2914
  bin: 2.25e1
  variant carriers: 78
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 4.25e1
  variant carriers: 103
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 4.75e1
  variant carriers: 166
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 8.75e1
  variant carriers: 118
hgvs: p.Pro72Leu
num of homozygotes: 2029
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

9-97055310-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055310
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055310
    reference: chr 9
allele count: 1
allele frequency: 8.663859576163989e-6
allele num: 115422
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.215C>G
  hgvsp: ENSP00000364503.4:p.Pro72Arg
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.215C>G
  hgvsp: ENSP00000474608.1:p.Pro72Arg
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.215C>G
  hgvsp: ENSP00000475038.1:p.Pro72Arg
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.215C>G
  hgvsp: ENSP00000340711.4:p.Pro72Arg
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.215C>G
  hgvsp: ENSP00000378792.2:p.Pro72Arg
  variant of: http://identifiers.org/hgnc/12957
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28184
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2605
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4412
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2805
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10296
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2157
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2906
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2212
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 501
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 620
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1017
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 539
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro72Arg
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: QD

9-97055320-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055320
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055320
    reference: chr 9
allele count: 1
allele frequency: 8.944543828264759e-6
allele num: 111800
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.225G>A
  hgvsp: ENST00000480716.1:c.225G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.225G>A
  hgvsp: ENST00000375354.4:c.225G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.225G>A
  hgvsp: ENST00000395395.2:c.225G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.225G>A
  hgvsp: ENST00000481550.2:c.225G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.225G>A
  hgvsp: ENST00000340911.4:c.225G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12957
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1960
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4680
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14245
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3773
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3530
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29049
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1266
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 792
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 777
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 818
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6543
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4673
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 650
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1033
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 926
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Glu75Glu
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/9-97055322-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055322
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055322
    reference: chr 9
allele count: 1
allele frequency: 8.964911337026877e-6
allele num: 111546
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.227A>C
  hgvsp: ENSP00000378792.2:p.Glu76Ala
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.227A>C
  hgvsp: ENSP00000340711.4:p.Glu76Ala
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.227A>C
  hgvsp: ENSP00000474608.1:p.Glu76Ala
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.227A>C
  hgvsp: ENSP00000364503.4:p.Glu76Ala
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.227A>C
  hgvsp: ENSP00000475038.1:p.Glu76Ala
  variant of: http://identifiers.org/hgnc/12957
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2002
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3693
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14154
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28837
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4815
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3739
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 800
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37501
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1266
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 835
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 645
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1077
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 832
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6786
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Glu76Ala
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff

9-97055326-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055326
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055326
    reference: chr 9
allele count: 1
allele frequency: 9.046826373308244e-6
allele num: 110536
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.231C>T
  hgvsp: ENST00000481550.2:c.231C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.231C>T
  hgvsp: ENST00000375354.4:c.231C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.231C>T
  hgvsp: ENST00000395395.2:c.231C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.231C>T
  hgvsp: ENST00000480716.1:c.231C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.231C>T
  hgvsp: ENST00000340911.4:c.231C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12957
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3741
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2191
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5258
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13973
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27868
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4184
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 932
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1254
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 880
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1222
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 957
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7514
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2411
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 782
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Asn77Asn
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: Other
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD

9-97055327-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055327
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055327
    reference: chr 9
allele count: 10443
allele frequency: 9.402517422073361e-2
allele num: 111066
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.232G>A
  hgvsp: ENSP00000364503.4:p.Glu78Lys
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.232G>A
  hgvsp: ENSP00000474608.1:p.Glu78Lys
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.232G>A
  hgvsp: ENSP00000475038.1:p.Glu78Lys
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.232G>A
  hgvsp: ENSP00000378792.2:p.Glu78Lys
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.232G>A
  hgvsp: ENSP00000340711.4:p.Glu78Lys
  variant of: http://identifiers.org/hgnc/12957
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 2.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4826
  bin: 7.5e0
  variant carriers: 112
genotype depth: GenotypeDepth
  all individuals: 13908
  bin: 2.75e1
  variant carriers: 1529
genotype depth: GenotypeDepth
  all individuals: 4248
  bin: 1.25e1
  variant carriers: 506
genotype depth: GenotypeDepth
  all individuals: 2474
  bin: 1.75e1
  variant carriers: 1061
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 4.25e1
  variant carriers: 538
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 98
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 106
genotype depth: GenotypeDepth
  all individuals: 24743
  bin: 2.25e1
  variant carriers: 1498
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.25e1
  variant carriers: 102
genotype depth: GenotypeDepth
  all individuals: 4172
  bin: 3.25e1
  variant carriers: 1095
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 3.75e1
  variant carriers: 797
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 4.75e1
  variant carriers: 289
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 112
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 5.25e1
  variant carriers: 187
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 126
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 129
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.25e1
  variant carriers: 118
genotype depth: GenotypeDepth
  all individuals: 1827
  bin: 9.75e1
  variant carriers: 1482
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 5.75e1
  variant carriers: 144
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 2.5e0
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 8.25e1
  variant carriers: 80
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 4.75e1
  variant carriers: 34
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 1.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 1.25e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 790
  bin: 7.75e1
  variant carriers: 48
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 9.25e1
  variant carriers: 61
genotype quality: GenotypeQuality
  all individuals: 3731
  bin: 6.75e1
  variant carriers: 45
genotype quality: GenotypeQuality
  all individuals: 10650
  bin: 9.75e1
  variant carriers: 9403
genotype quality: GenotypeQuality
  all individuals: 950
  bin: 3.25e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 4.25e1
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 827
  bin: 2.75e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 6980
  bin: 2.25e1
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 5.75e1
  variant carriers: 35
hgvs: p.Glu78Lys
num of homozygotes: 564
population: East Asian
population: Latino
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum

9-97055339-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055339
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055339
    reference: chr 9
allele count: 1
allele frequency: 9.485146260955344e-6
allele num: 105428
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.244G>T
  hgvsp: ENSP00000340711.4:p.Asp82Tyr
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.244G>T
  hgvsp: ENSP00000378792.2:p.Asp82Tyr
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.244G>T
  hgvsp: ENSP00000364503.4:p.Asp82Tyr
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.244G>T
  hgvsp: ENSP00000475038.1:p.Asp82Tyr
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.244G>T
  hgvsp: ENSP00000474608.1:p.Asp82Tyr
  variant of: http://identifiers.org/hgnc/12957
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3746
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14653
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2423
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7659
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6826
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22756
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4236
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33717
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 582
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1369
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 845
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1619
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1099
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 749
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Asp82Tyr
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

9-97055341-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055341
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055341
    reference: chr 9
allele count: 3
allele frequency: 2.865767452523786e-5
allele num: 104684
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.246C>T
  hgvsp: ENST00000480716.1:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.246C>T
  hgvsp: ENST00000340911.4:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.246C>T
  hgvsp: ENST00000395395.2:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.246C>T
  hgvsp: ENST00000375354.4:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.246C>T
  hgvsp: ENST00000481550.2:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12957
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3702
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7999
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2539
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22193
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7224
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14385
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 431
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 595
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1730
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1439
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 789
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12517
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 997
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1167
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asp82Asp
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP

9-97055347-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055347
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055347
    reference: chr 9
allele count: 18
allele frequency: 1.767443687280297e-4
allele num: 101842
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.252T>C
  hgvsp: ENST00000395395.2:c.252T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.252T>C
  hgvsp: ENST00000375354.4:c.252T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.252T>C
  hgvsp: ENST00000340911.4:c.252T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.252T>C
  hgvsp: ENST00000481550.2:c.252T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.252T>C
  hgvsp: ENST00000480716.1:c.252T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12957
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3174
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9319
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20222
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13157
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8583
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3526
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29509
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1466
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 661
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2096
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 928
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14681
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1698
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3884
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1522
  bin: 9.75e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 864
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Cys84Cys
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP

9-97055348-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055348
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055348
    reference: chr 9
allele count: 2
allele frequency: 1.966297658139489e-5
allele num: 101714
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.253C>G
  hgvsp: ENSP00000340711.4:p.Pro85Ala
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.253C>G
  hgvsp: ENSP00000474608.1:p.Pro85Ala
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.253C>G
  hgvsp: ENSP00000475038.1:p.Pro85Ala
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.253C>G
  hgvsp: ENSP00000364503.4:p.Pro85Ala
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.253C>G
  hgvsp: ENSP00000378792.2:p.Pro85Ala
  variant of: http://identifiers.org/hgnc/12957
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3129
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9351
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3526
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8583
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20192
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13196
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 718
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 773
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2085
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29955
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 611
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 912
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3864
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro85Ala
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum

9-97055351-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055351
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055351
    reference: chr 9
allele count: 2
allele frequency: 1.998481154322715e-5
allele num: 100076
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.256G>T
  hgvsp: ENSP00000364503.4:p.Gly86Cys
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.256G>T
  hgvsp: ENSP00000340711.4:p.Ala86Ser
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: stop_gained
  consequence: splice_region_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.256G>T
  hgvsp: ENSP00000378792.2:p.Glu86Ter
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.256G>T
  hgvsp: ENSP00000474608.1:p.Gly86Cys
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: splice_region_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.256G>T
  hgvsp: ENSP00000475038.1:p.Glu86Ter
  variant of: http://identifiers.org/hgnc/12957
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3518
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10118
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18836
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12603
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3449
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9406
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 728
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3736
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 536
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27932
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 752
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16060
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 641
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 884
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Glu86Ter
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/9-97055362-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055362
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055362
    reference: chr 9
allele count: 1014
allele frequency: 1.0767760433259e-2
allele num: 94170
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.256+11A>C
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.256+11A>C
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.267A>C
  hgvsp: ENSP00000474608.1:p.Glu89Asp
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.256+11A>C
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.256+11A>C
  variant of: http://identifiers.org/hgnc/12957
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10457
  bin: 2.75e1
  variant carriers: 130
genotype depth: GenotypeDepth
  all individuals: 12745
  bin: 7.5e0
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 4993
  bin: 1.75e1
  variant carriers: 137
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 3.75e1
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 4.25e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 5.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 14421
  bin: 2.25e1
  variant carriers: 141
genotype depth: GenotypeDepth
  all individuals: 11778
  bin: 1.25e1
  variant carriers: 118
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 4.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 3116
  bin: 3.25e1
  variant carriers: 65
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 9.75e1
  variant carriers: 132
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 769
  bin: 7.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 2127
  bin: 2.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 2227
  bin: 9.75e1
  variant carriers: 921
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 8.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 5.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 21826
  bin: 6.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2727
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 8.25e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 1.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 20318
  bin: 2.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 1.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 779
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 625
  bin: 5.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 953
  bin: 4.75e1
  variant carriers: 5
hgvs: p.Glu89Asp
num of homozygotes: 39
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: African
reference allele: A
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum

9-97055365-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055365
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055365
    reference: chr 9
allele count: 3
allele frequency: 3.29453107840984e-5
allele num: 91060
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.270C>T
  hgvsp: ENST00000481550.2:c.270C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.256+14C>T
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.256+14C>T
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.256+14C>T
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.256+14C>T
  variant of: http://identifiers.org/hgnc/12957
canonical: false
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5271
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12800
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13924
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9754
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3076
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12731
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 835
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 748
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1199
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 950
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22248
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 638
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1362
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2259
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1078
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2270
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala90Ala
num of homozygotes: 1
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum

9-97055371-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055371
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055371
    reference: chr 9
allele count: 1
allele frequency: 1.138096647167277e-5
allele num: 87866
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.256+20C>G
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.256+20C>G
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.256+20C>G
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.256+20C>G
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.276C>G
  hgvsp: ENST00000481550.2:c.276C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12957
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2932
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8917
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13566
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5063
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15158
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11670
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 721
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2857
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17221
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24017
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2261
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1382
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1386
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2220
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 678
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1060
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gly92Gly
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum

9-97055375-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055375
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055375
    reference: chr 9
allele count: 16
allele frequency: 1.881821603312006e-4
allele num: 85024
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.256+24C>T
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.256+24C>T
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.256+24C>T
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.256+24C>T
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.280C>T
  hgvsp: ENSP00000474608.1:p.Arg94Ter
  variant of: http://identifiers.org/hgnc/12957
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5050
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2841
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16027
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 8301
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13955
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10822
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2180
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1177
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1772
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 880
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 930
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1320
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24930
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2822
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 710
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2298
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg94Ter
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS

9-97055376-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055376
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055376
    reference: chr 9
allele count: 11486
allele frequency: 1.374877307222714e-1
allele num: 83542
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.256+25G>A
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.281G>A
  hgvsp: ENSP00000474608.1:p.Arg94Gln
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.256+25G>A
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.256+25G>A
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.256+25G>A
  variant of: http://identifiers.org/hgnc/12957
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 117
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 108
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 9.75e1
  variant carriers: 1029
genotype depth: GenotypeDepth
  all individuals: 16347
  bin: 7.5e0
  variant carriers: 520
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 117
genotype depth: GenotypeDepth
  all individuals: 5148
  bin: 1.75e1
  variant carriers: 2547
genotype depth: GenotypeDepth
  all individuals: 14304
  bin: 1.25e1
  variant carriers: 1861
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 4.75e1
  variant carriers: 74
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 115
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 86
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.25e1
  variant carriers: 81
genotype depth: GenotypeDepth
  all individuals: 9284
  bin: 2.25e1
  variant carriers: 1995
genotype depth: GenotypeDepth
  all individuals: 2849
  bin: 3.25e1
  variant carriers: 451
genotype depth: GenotypeDepth
  all individuals: 1684
  bin: 2.5e0
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 4.25e1
  variant carriers: 111
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 3.75e1
  variant carriers: 205
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 91
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.25e1
  variant carriers: 81
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 80
genotype depth: GenotypeDepth
  all individuals: 7934
  bin: 2.75e1
  variant carriers: 1093
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 1.25e1
  variant carriers: 41
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 2.5e0
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 1732
  bin: 2.75e1
  variant carriers: 52
genotype quality: GenotypeQuality
  all individuals: 12955
  bin: 6.25e1
  variant carriers: 163
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 4.25e1
  variant carriers: 78
genotype quality: GenotypeQuality
  all individuals: 24387
  bin: 2.25e1
  variant carriers: 66
genotype quality: GenotypeQuality
  all individuals: 1114
  bin: 3.75e1
  variant carriers: 120
genotype quality: GenotypeQuality
  all individuals: 629
  bin: 5.25e1
  variant carriers: 185
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 8.75e1
  variant carriers: 109
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 9.25e1
  variant carriers: 131
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 7.75e1
  variant carriers: 146
genotype quality: GenotypeQuality
  all individuals: 849
  bin: 1.75e1
  variant carriers: 58
genotype quality: GenotypeQuality
  all individuals: 9085
  bin: 9.75e1
  variant carriers: 8868
genotype quality: GenotypeQuality
  all individuals: 1939
  bin: 7.5e0
  variant carriers: 38
genotype quality: GenotypeQuality
  all individuals: 1772
  bin: 3.25e1
  variant carriers: 78
hgvs: p.Arg94Gln
num of homozygotes: 1350
population: South Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ

9-97055387-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055387
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055387
    reference: chr 9
allele count: 1
allele frequency: 1.420979338960412e-5
allele num: 70374
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.256+36G>A
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.256+36G>A
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.292G>A
  hgvsp: ENSP00000474608.1:p.Ala98Thr
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.256+36G>A
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.256+36G>A
  variant of: http://identifiers.org/hgnc/12957
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21071
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7350
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3763
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15940
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2814
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6239
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1767
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2188
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1301
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 977
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4093
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ala98Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD

9-97055388-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055388
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055388
    reference: chr 9
allele count: 1
allele frequency: 1.427674033464679e-5
allele num: 70044
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.256+37C>G
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.256+37C>G
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.256+37C>G
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.256+37C>G
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.293C>G
  hgvsp: ENSP00000474608.1:p.Ala98Gly
  variant of: http://identifiers.org/hgnc/12957
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21210
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15882
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2301
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3787
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7338
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6271
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2802
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32374
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1932
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1117
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1698
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4108
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12743
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala98Gly
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

9-97055390-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055390
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055390
    reference: chr 9
allele count: 2
allele frequency: 2.884670859054982e-5
allele num: 69332
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.256+39G>T
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.256+39G>T
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.295G>T
  hgvsp: ENSP00000474608.1:p.Val99Leu
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.256+39G>T
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.256+39G>T
  variant of: http://identifiers.org/hgnc/12957
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15875
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21467
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3994
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7227
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2798
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2122
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6116
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 869
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4328
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1887
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 850
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1619
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Val99Leu
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum

9-97055398-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055398
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055398
    reference: chr 9
allele count: 1
allele frequency: 1.601588776065857e-5
allele num: 62438
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.256+47C>T
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.256+47C>T
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.256+47C>T
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.256+47C>T
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.303C>T
  hgvsp: ENST00000481550.2:c.303C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12957
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15481
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6403
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6488
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2697
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4524
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22172
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10673
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1394
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32654
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7030
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1277
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1746
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 507
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ser101Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: African
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

9-97055402-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055402
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055401
    reference: chr 9
allele count: 8
allele frequency: 1.361146085003573e-4
allele num: 58774
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.256+52delC
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.256+52delC
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.308delC
  hgvsp: ENSP00000474608.1:p.Ala103GlufsTer12
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.256+52delC
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.256+52delC
  variant of: http://identifiers.org/hgnc/12957
canonical: false
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6031
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14875
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3877
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2651
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8190
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22286
  bin: 7.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 629
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 575
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 524
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31857
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1307
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8796
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1475
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1666
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala103GlufsTer12
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: GC
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD

9-97055411-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055411
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055411
    reference: chr 9
allele count: 4
allele frequency: 7.907638779060572e-5
allele num: 50584
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.256+60G>A
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.256+60G>A
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.256+60G>A
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.256+60G>A
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.316G>A
  hgvsp: ENSP00000474608.1:p.Glu106Lys
  variant of: http://identifiers.org/hgnc/12957
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12742
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5432
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21870
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12514
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2530
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3080
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1583
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1811
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13343
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1372
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 700
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29026
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 827
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8547
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 973
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Glu106Lys
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ

9-97055415-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055415
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055415
    reference: chr 9
allele count: 1
allele frequency: 2.122781693130678e-5
allele num: 47108
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.320G>C
  hgvsp: ENSP00000474608.1:p.Gly107Ala
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.256+64G>C
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.256+64G>C
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.256+64G>C
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.256+64G>C
  variant of: http://identifiers.org/hgnc/12957
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14730
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5251
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21228
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11642
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2836
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2485
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1303
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1754
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 785
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 890
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15654
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26976
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1773
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 859
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gly107Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: Other
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum

9-97055416-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055416
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055416
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 46658
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.256+65A>G
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.321A>G
  hgvsp: ENST00000481550.2:c.321A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.256+65A>G
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.256+65A>G
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.256+65A>G
  variant of: http://identifiers.org/hgnc/12957
canonical: false
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15170
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21062
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11478
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5217
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2801
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2476
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 799
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 854
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1772
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 835
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1582
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26841
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16105
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 446
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1277
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Gly107Gly
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: Other
population: European (Finnish)
reference allele: A
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff

9-97055442-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055442
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055442
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 26564
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.256+91G>A
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.256+91G>A
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.347G>A
  hgvsp: ENSP00000474608.1:p.Gly116Glu
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.256+91G>A
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.256+91G>A
  variant of: http://identifiers.org/hgnc/12957
canonical: false
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 4109
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13009
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29871
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4262
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1939
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2079
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1348
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1581
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30301
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1218
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 982
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12428
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gly116Glu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP

9-97055454-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055454
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055454
    reference: chr 9
allele count: 1
allele frequency: 4.678143712574851e-5
allele num: 21376
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.256+103C>T
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.359C>T
  hgvsp: ENSP00000474608.1:p.Ser120Leu
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.256+103C>T
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.256+103C>T
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.256+103C>T
  variant of: http://identifiers.org/hgnc/12957
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32458
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9187
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3295
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1747
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3378
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31914
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1008
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 8746
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 943
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4590
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 579
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 850
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2071
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ser120Leu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Other
population: East Asian
reference allele: C
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

9-97055463-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055463
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055463
    reference: chr 9
allele count: 8
allele frequency: 4.338394793926247e-4
allele num: 18440
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.256+112T>A
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.256+112T>A
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.368T>A
  hgvsp: ENSP00000474608.1:p.Leu123Gln
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.256+112T>A
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.256+112T>A
  variant of: http://identifiers.org/hgnc/12957
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1682
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7513
  bin: 7.5e0
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32420
  bin: 2.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2518
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3310
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3497
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 604
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 31291
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 8.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 769
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2204
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7653
  bin: 2.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 5.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 618
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 9.25e1
  variant carriers: 1
hgvs: p.Leu123Gln
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Other
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

9-97055465-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055465
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055465
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 18092
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.256+114G>A
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.256+114G>A
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.370G>A
  hgvsp: ENSP00000474608.1:p.Gly124Ser
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.256+114G>A
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.256+114G>A
  variant of: http://identifiers.org/hgnc/12957
canonical: false
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7214
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3405
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2327
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32198
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7527
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 536
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 606
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31069
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 640
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 756
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 645
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3298
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gly124Ser
num of homozygotes: 0
population: Latino
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

9-97055482-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055482
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055482
    reference: chr 9
allele count: 1
allele frequency: 7.013606396409034e-5
allele num: 14258
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.256+131G>A
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.*6G>A
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.256+131G>A
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.256+131G>A
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.256+131G>A
  variant of: http://identifiers.org/hgnc/12957
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3991
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28481
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5348
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 726
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6499
  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 1390
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25611
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 7.25e1
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genotype quality: GenotypeQuality
  all individuals: 3509
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 592
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

9-97055484-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055484
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055484
    reference: chr 9
allele count: 1
allele frequency: 7.043245527539091e-5
allele num: 14198
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.256+133A>G
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.256+133A>G
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.*8A>G
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.256+133A>G
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.256+133A>G
  variant of: http://identifiers.org/hgnc/12957
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28621
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3990
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5363
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3136
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 606
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 652
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1471
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 460
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 714
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26055
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: A
site quality: FS
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

http://identifiers.org/exac.variant/9-97055503-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055503
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055503
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 10830
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.*27A>C
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.256+152A>C
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.256+152A>C
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.256+152A>C
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.256+152A>C
  variant of: http://identifiers.org/hgnc/12957
canonical: false
consequence: 3' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5056
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3281
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25447
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 587
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20709
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 735
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5354
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 902
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5180
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: MQ
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

9-97055515-T-TC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055515
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055516
    reference: chr 9
allele count: 1
allele frequency: 1.166588894073728e-4
allele num: 8572
alternate allele: TC
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.256+170dupC
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.256+170dupC
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.*45dupC
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.256+170dupC
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.256+170dupC
  variant of: http://identifiers.org/hgnc/12957
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2489
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24537
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5539
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7860
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 596
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1449
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3597
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17611
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1209
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: QD

9-97055674-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055674
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055674
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 652
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.*198A>G
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.256+323A>G
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.256+323A>G
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.256+323A>G
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.257-50A>G
  variant of: http://identifiers.org/hgnc/12957
canonical: false
consequence: 3' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6571
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2374
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 767
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 697
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5924
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum

9-97055690-TTTTTTA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055690
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055684
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 430
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.256+357_256+362delATTTTT
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.*232_*237delATTTTT
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.257-16_257-11delATTTTT
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.256+357_256+362delATTTTT
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.256+357_256+362delATTTTT
  variant of: http://identifiers.org/hgnc/12957
canonical: false
consequence: 3' UTR
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1995
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5359
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 644
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4920
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1218
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: TTTTTTA
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

9-97055744-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055744
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055744
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 128
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.256+393G>C
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.*268G>C
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.256+393G>C
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.277G>C
  hgvsp: ENSP00000475038.1:p.Ala93Pro
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.256+393G>C
  variant of: http://identifiers.org/hgnc/12957
canonical: false
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5233
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4896
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 854
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala93Pro
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD

http://identifiers.org/exac.variant/9-97055851-C-CA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97055851
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97055852
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 2
alternate allele: CA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.256+501dupA
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.256+501dupA
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000475038
  ensembl transcript: ENST00000480716
  gene symbol: ZNF169
  hgvsc: ENST00000480716.1:c.*49dupA
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000474608
  ensembl transcript: ENST00000481550
  gene symbol: ZNF169
  hgvsc: ENST00000481550.2:c.*376dupA
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.256+501dupA
  variant of: http://identifiers.org/hgnc/12957
canonical: false
consequence: 3' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4212
  bin: 2.5e0
  variant carriers: 82
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.5e0
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1667
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 1.25e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2529
  bin: 7.5e0
  variant carriers: 47
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 6.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP

9-97059075-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97059075
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97059075
    reference: chr 9
allele count: 1
allele frequency: 6.831534362617844e-5
allele num: 14638
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.257-3022C>T
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.257-2655C>T
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.257-22C>T
  variant of: http://identifiers.org/hgnc/12957
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1494
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3505
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1318
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 687
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4955
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1197
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD

9-97059081-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97059081
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97059081
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 14526
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.257-2649T>C
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.257-3016T>C
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.257-16T>C
  variant of: http://identifiers.org/hgnc/12957
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3487
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4923
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 668
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1382
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1188
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS

9-97059103-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97059103
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97059103
    reference: chr 9
allele count: 4
allele frequency: 2.85673475217826e-4
allele num: 14002
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.257-2627G>A
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.263G>A
  hgvsp: ENSP00000364503.4:p.Arg88Gln
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.257-2994G>A
  variant of: http://identifiers.org/hgnc/12957
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 246
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3339
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1879
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1459
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 41
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 5.75e1
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genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 658
  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 4730
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 44
  bin: 9.25e1
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genotype quality: GenotypeQuality
  all individuals: 1130
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genotype quality: GenotypeQuality
  all individuals: 109
  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 73
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg88Gln
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP

9-97059123-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97059123
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97059123
    reference: chr 9
allele count: 1
allele frequency: 7.33998825601879e-5
allele num: 13624
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.257-2607C>T
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.283C>T
  hgvsp: ENSP00000364503.4:p.Arg95Ter
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.257-2974C>T
  variant of: http://identifiers.org/hgnc/12957
canonical: false
consequence: stop gained
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1684
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3240
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1845
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 719
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4501
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 40
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 25
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genotype quality: GenotypeQuality
  all individuals: 1096
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Arg95Ter
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: DP

9-97059124-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97059124
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97059124
    reference: chr 9
allele count: 1
allele frequency: 7.347538574577516e-5
allele num: 13610
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.284G>A
  hgvsp: ENSP00000364503.4:p.Arg95Gln
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.257-2606G>A
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.257-2973G>A
  variant of: http://identifiers.org/hgnc/12957
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1842
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3238
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1594
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1097
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
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genotype quality: GenotypeQuality
  all individuals: 266
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genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg95Gln
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP

9-97059174-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97059174
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97059174
    reference: chr 9
allele count: 86
allele frequency: 6.895445798588839e-3
allele num: 12472
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.*43A>G
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.257-2923A>G
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.257-2556A>G
  variant of: http://identifiers.org/hgnc/12957
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 2.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2193
  bin: 1.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 2.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 1397
  bin: 1.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1098
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1550
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 773
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1700
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 8.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 805
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 9.75e1
  variant carriers: 81
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 2
population: Other
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum

9-97059180-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97059180
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97059180
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 10936
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.257-2550C>T
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000364503
  ensembl transcript: ENST00000375354
  gene symbol: ZNF169
  hgvsc: ENST00000375354.4:c.*49C>T
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.257-2917C>T
  variant of: http://identifiers.org/hgnc/12957
canonical: false
consequence: 3' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1589
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1847
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1433
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1266
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 729
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 829
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1578
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 832
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 981
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS

9-97061771-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 97061771
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 97061771
    reference: chr 9
allele count: 22
allele frequency: 6.470588235294118e-1
allele num: 34
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000340711
  ensembl transcript: ENST00000340911
  gene symbol: ZNF169
  hgvsc: ENST00000340911.4:c.298G>A
  hgvsp: ENSP00000340711.4:p.Glu100Lys
  variant of: http://identifiers.org/hgnc/12957
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000175787
  ensembl protein: ENSP00000378792
  ensembl transcript: ENST00000395395
  gene symbol: ZNF169
  hgvsc: ENST00000395395.2:c.257-326G>A
  variant of: http://identifiers.org/hgnc/12957
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2712
  bin: 2.5e0
  variant carriers: 325
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 7.5e0
  variant carriers: 191
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 9.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.75e1
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 1.75e1
  variant carriers: 75
genotype quality: GenotypeQuality
  all individuals: 2094
  bin: 7.5e0
  variant carriers: 193
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 2.25e1
  variant carriers: 40
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 1.25e1
  variant carriers: 90
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 6.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 565
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.25e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 9.75e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 8.25e1
  variant carriers: 8
hgvs: p.Glu100Lys
num of homozygotes: 6
reference allele: G

GenotypeQuality
all individuals: 50
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2178
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4051
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4038
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4033
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28465
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.546216286986122e-5
allele num: 15276
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66070
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.22e-1

MQ
type: SiteQuality
SIO_000300: 5.863e1

MQRankSum
type: SiteQuality
SIO_000300: -4.33e-1

DP
type: SiteQuality
SIO_000300: 2.643166e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.29e-1

QD
type: SiteQuality
SIO_000300: 9.73e0

VQSLOD
type: SiteQuality
SIO_000300: -1.272e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -7.22e-1

GenotypeQuality
all individuals: 2175
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4051
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4032
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2350
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.513500423780119e-5
allele num: 66072
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15266
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.326007959854646e-4
allele num: 11558
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.15e0

MQ
type: SiteQuality
SIO_000300: 5.924e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.52e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.77e-1

DP
type: SiteQuality
SIO_000300: 2.641668e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.856e0

FS
type: SiteQuality
SIO_000300: 5.580000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.5e-2

QD
type: SiteQuality
SIO_000300: 1.328e1

GenotypeQuality
all individuals: 1995
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28458
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2168
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3984
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 651
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.514508996183437e-5
allele num: 66028
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15162
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.636199e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.51e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.545e0

FS
type: SiteQuality
SIO_000300: 6.483e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -2.22e-1

QD
type: SiteQuality
SIO_000300: 1.162e1

MQ
type: SiteQuality
SIO_000300: 5.966e1

GenotypeQuality
all individuals: 28479
bin: 9.75e1
variant carriers: 149

GenotypeQuality
all individuals: 90
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3931
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4018
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4080
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2154
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 14
allele frequency: 2.121276402315222e-4
allele num: 65998
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.329964090969544e-4
allele num: 15038
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 118
allele frequency: 1.135926068540624e-2
allele num: 10388
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

Latino
type: Population
allele count: 15
allele frequency: 1.298251687727194e-3
allele num: 11554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.518e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.37e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.4e-1

DP
type: SiteQuality
SIO_000300: 2.630132e6

FS
type: SiteQuality
SIO_000300: 7.62e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.98e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.36e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.7e-3

MQ
type: SiteQuality
SIO_000300: 5.958e1

GenotypeQuality
all individuals: 3978
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28401
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 144
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 769
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2340
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2118
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.63020030816641e-5
allele num: 10384
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65868
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14746
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.6e0

QD
type: SiteQuality
SIO_000300: 6.88e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.6e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.43e-1

FS
type: SiteQuality
SIO_000300: 1.824e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: -2.624e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.695e0

DP
type: SiteQuality
SIO_000300: 2.617902e6

GenotypeQuality
all individuals: 905
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28392
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1911
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 794
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2094
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3743
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4041
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.039421294185587e-5
allele num: 65802
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.63e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.7e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.09e0

MQRankSum
type: SiteQuality
SIO_000300: 4.0e-1

DP
type: SiteQuality
SIO_000300: 2.611772e6

FS
type: SiteQuality
SIO_000300: 3.981e0

QD
type: SiteQuality
SIO_000300: 1.167e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.79e-1

GenotypeQuality
all individuals: 14548
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1015
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 384
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2478
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3022
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9144
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5272
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3722
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 24030
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

VQSLOD
type: SiteQuality
SIO_000300: -9.072e-1

QD
type: SiteQuality
SIO_000300: 6.38e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.231e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.57e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

DP
type: SiteQuality
SIO_000300: 7.2522e5

GenotypeQuality
all individuals: 1147
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 987
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2116
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 207
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5292
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 3.311258278145695e-4
allele num: 3020
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2470
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9116
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 384
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.166666666666667e-5
allele num: 24000
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3702
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.65e-1

QD
type: SiteQuality
SIO_000300: 1.433e1

DP
type: SiteQuality
SIO_000300: 7.26095e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.61e-2

FS
type: SiteQuality
SIO_000300: 1.457e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 4.2e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.52e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.49e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.424e0

GenotypeQuality
all individuals: 2602
bin: 2.5e0
variant carriers: 10

GenotypeQuality
all individuals: 522
bin: 7.75e1
variant carriers: 224

GenotypeQuality
all individuals: 2531
bin: 3.75e1
variant carriers: 75

GenotypeQuality
all individuals: 5963
bin: 9.75e1
variant carriers: 4350

GenotypeQuality
all individuals: 314
bin: 5.75e1
variant carriers: 229

South Asian
type: Population
allele count: 1236
allele frequency: 1.331035968124058e-1
allele num: 9286
num of homozygotes: 86

Other
type: Population
allele count: 40
allele frequency: 1.015228426395939e-1
allele num: 394
num of homozygotes: 1

Latino
type: Population
allele count: 123
allele frequency: 4.054054054054054e-2
allele num: 3034
num of homozygotes: 4

European (Finnish)
type: Population
allele count: 243
allele frequency: 9.589581689029203e-2
allele num: 2534
num of homozygotes: 6

East Asian
type: Population
allele count: 2
allele frequency: 5.370569280343716e-4
allele num: 3724
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2853
allele frequency: 1.164014687882497e-1
allele num: 24510
num of homozygotes: 133

African
type: Population
allele count: 116
allele frequency: 2.18209179834462e-2
allele num: 5316
num of homozygotes: 1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.463e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.27e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.68e0

DP
type: SiteQuality
SIO_000300: 7.42081e5

MQRankSum
type: SiteQuality
SIO_000300: 1.35e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.370000000000001e-1

GenotypeQuality
all individuals: 1235
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 566
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 417
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2804
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 412
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4078
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3452
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5586
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9862
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26760
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.38e0

VQSLOD
type: SiteQuality
SIO_000300: 1.02e0

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 9.119999999999999e0

MQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.12e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.17879e5

GenotypeQuality
all individuals: 201
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2137
bin: 9.75e1
variant carriers: 42

GenotypeQuality
all individuals: 4158
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9208
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 8.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28142
num of homozygotes: 0

East Asian
type: Population
allele count: 39
allele frequency: 9.048723897911833e-3
allele num: 4310
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3714
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 422
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.734304543877905e-4
allele num: 5766
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.959631589261219e-4
allele num: 10206
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2956
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.534e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.299999999999999e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -9.1e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.72e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.86e0

DP
type: SiteQuality
SIO_000300: 8.64046e5

QD
type: SiteQuality
SIO_000300: 1.255e1

GenotypeQuality
all individuals: 1016
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 367
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27432
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1775
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4000
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3022
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 29204
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.699524133242692e-4
allele num: 5884
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4452
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10408
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 426
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.63e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.77e0

VQSLOD
type: SiteQuality
SIO_000300: -2.725e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.699999999999999e-3

DP
type: SiteQuality
SIO_000300: 8.90411e5

FS
type: SiteQuality
SIO_000300: 5.836e0

MQRankSum
type: SiteQuality
SIO_000300: 6.73e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.588e0

QD
type: SiteQuality
SIO_000300: 2.806e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 391
bin: 7.75e1
variant carriers: 27

GenotypeQuality
all individuals: 280
bin: 8.25e1
variant carriers: 29

GenotypeQuality
all individuals: 380
bin: 7.25e1
variant carriers: 17

GenotypeQuality
all individuals: 1634
bin: 3.75e1
variant carriers: 36

GenotypeQuality
all individuals: 1943
bin: 1.75e1
variant carriers: 39

East Asian
type: Population
allele count: 26
allele frequency: 7.821901323706379e-3
allele num: 3324
num of homozygotes: 0

Latino
type: Population
allele count: 47
allele frequency: 1.60958904109589e-2
allele num: 2920
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 683
allele frequency: 2.872886346428872e-2
allele num: 23774
num of homozygotes: 5

European (Finnish)
type: Population
allele count: 47
allele frequency: 1.940545004128819e-2
allele num: 2422
num of homozygotes: 0

South Asian
type: Population
allele count: 97
allele frequency: 1.172914147521161e-2
allele num: 8270
num of homozygotes: 0

African
type: Population
allele count: 32
allele frequency: 6.42570281124498e-3
allele num: 4980
num of homozygotes: 0

Other
type: Population
allele count: 8
allele frequency: 2.259887005649718e-2
allele num: 354
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.33e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.12e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.000753e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.76e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 6.17e0

GenotypeQuality
all individuals: 1071
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1634
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2071
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 380
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4980
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 354
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8270
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3324
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 23774
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2920
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2422
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.000753e6

VQSLOD
type: SiteQuality
SIO_000300: 4.12e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.76e-2

QD
type: SiteQuality
SIO_000300: 6.17e0

MQRankSum
type: SiteQuality
SIO_000300: 3.33e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 6577
bin: 6.25e1
variant carriers: 5

GenotypeQuality
all individuals: 809
bin: 4.25e1
variant carriers: 3

GenotypeQuality
all individuals: 3142
bin: 3.25e1
variant carriers: 4

GenotypeQuality
all individuals: 280
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 215
bin: 9.25e1
variant carriers: 2

South Asian
type: Population
allele count: 1
allele frequency: 1.20918984280532e-4
allele num: 8270
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 1.712328767123288e-3
allele num: 2920
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 4.128819157720892e-4
allele num: 2422
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 50
allele frequency: 2.103137881719526e-3
allele num: 23774
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 354
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 8.032128514056225e-4
allele num: 4980
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 1.805054151624549e-3
allele num: 3324
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.76e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.1e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 6.17e0

VQSLOD
type: SiteQuality
SIO_000300: 4.12e0

DP
type: SiteQuality
SIO_000300: 1.000753e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 141
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 784
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 391
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1096
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5162
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 360
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3248
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 1.261776581426649e-4
allele num: 23776
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8432
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.06e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.99e-2

QD
type: SiteQuality
SIO_000300: 1.107e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.64e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.67e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.14e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.22e-1

DP
type: SiteQuality
SIO_000300: 9.91964e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1312
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3154
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2500
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2418
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 385
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4212
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 596
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.120838070488874e-5
allele num: 12314
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6236
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 41156
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7280
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6804
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.65e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.377e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.65e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.070847e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.77e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.4e-3

QD
type: SiteQuality
SIO_000300: 1.637e1

GenotypeQuality
all individuals: 30936
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 467
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 418
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2449
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1263
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 1.093613298337708e-4
allele num: 9144
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51550
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13584
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7782
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5234
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 722
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.51e0

FS
type: SiteQuality
SIO_000300: 1.72e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.6e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.73e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 9.05e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.3e-2

QD
type: SiteQuality
SIO_000300: 1.209e1

DP
type: SiteQuality
SIO_000300: 1.27072e6

GenotypeQuality
all individuals: 1343
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7725
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1455
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8344
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.1059500110595e-4
allele num: 9042
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14412
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57794
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10180
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5826
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 6.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.5e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -6.68e-1

FS
type: SiteQuality
SIO_000300: 3.833e0

MQRankSum
type: SiteQuality
SIO_000300: 3.3e-1

QD
type: SiteQuality
SIO_000300: 1.323e1

DP
type: SiteQuality
SIO_000300: 1.380141e6

MQ
type: SiteQuality
SIO_000300: 5.905e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e0

GenotypeQuality
all individuals: 217
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37735
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 581
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2477
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1463
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.447206039504981e-5
allele num: 58018
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10214
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5844
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9062
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14460
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8358
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.17e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.36e0

QD
type: SiteQuality
SIO_000300: 1.057e1

MQRankSum
type: SiteQuality
SIO_000300: -1.5e-1

FS
type: SiteQuality
SIO_000300: 2.691e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 6.19e-1

DP
type: SiteQuality
SIO_000300: 1.383868e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 2482
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1450
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 627
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1341
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 593
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 914
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8384
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9088
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10234
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5858
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 8.586049386956073e-5
allele num: 58234
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.872e0

QD
type: SiteQuality
SIO_000300: 1.223e1

MQRankSum
type: SiteQuality
SIO_000300: -2.8e-1

DP
type: SiteQuality
SIO_000300: 1.39005e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

FS
type: SiteQuality
SIO_000300: 5.3e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.03e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.61e0

GenotypeQuality
all individuals: 548
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7134
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1471
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1371
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58486
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5892
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.096731739416539e-4
allele num: 9118
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.710623422023694e-5
allele num: 10298
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8400
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.880000000000001e0

FS
type: SiteQuality
SIO_000300: 4.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -6.38e-1

MQ
type: SiteQuality
SIO_000300: 5.952e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.1e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.31e-1

DP
type: SiteQuality
SIO_000300: 1.395181e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e0

MQRankSum
type: SiteQuality
SIO_000300: 2.66e-1

GenotypeQuality
all individuals: 100
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4300
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6560
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1537
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 481
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1412
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10424
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8442
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.686283767832451e-5
allele num: 59302
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14684
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5970
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9202
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.03e-1

DP
type: SiteQuality
SIO_000300: 1.406032e6

VQSLOD
type: SiteQuality
SIO_000300: -1.4e0

QD
type: SiteQuality
SIO_000300: 6.9e0

FS
type: SiteQuality
SIO_000300: 8.651e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.15e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.38e-1

MQ
type: SiteQuality
SIO_000300: 5.945e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.03e-1

GenotypeQuality
all individuals: 488
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6052
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2503
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 430
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 528
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4367
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14802
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9268
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.667889785842951e-5
allele num: 59956
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8462
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6040
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.513e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.056e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

DP
type: SiteQuality
SIO_000300: 1.418223e6

MQRankSum
type: SiteQuality
SIO_000300: 4.6e-1

QD
type: SiteQuality
SIO_000300: 6.18e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.68e-1

GenotypeQuality
all individuals: 492
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1005
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 583
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2506
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 951
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38172
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6052
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.663561352142667e-5
allele num: 60112
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14818
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8468
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.150537634408602e-4
allele num: 9300
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.957e1

FS
type: SiteQuality
SIO_000300: 5.227e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.12e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.17e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.669e0

QD
type: SiteQuality
SIO_000300: 1.306e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.55e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.82e0

DP
type: SiteQuality
SIO_000300: 1.421589e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

GenotypeQuality
all individuals: 562
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1658
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 761
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2519
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 1037
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 7.5e0
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10654
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 5.333902282910177e-4
allele num: 9374
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6112
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 8.226931683559299e-5
allele num: 60776
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14906
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.16e-1

DP
type: SiteQuality
SIO_000300: 1.434447e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

FS
type: SiteQuality
SIO_000300: 2.494e0

QD
type: SiteQuality
SIO_000300: 1.382e1

MQ
type: SiteQuality
SIO_000300: 5.929e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.54e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.63e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.87e-1

GenotypeQuality
all individuals: 765
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 525
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 734
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 421
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.380863039399625e-5
allele num: 10660
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9386
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60858
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6116
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 4.018215912135012e-4
allele num: 14932
num of homozygotes: 1

MQRankSum
type: SiteQuality
SIO_000300: 1.04e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.58e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.43e-2

QD
type: SiteQuality
SIO_000300: 1.378e1

DP
type: SiteQuality
SIO_000300: 1.435607e6

FS
type: SiteQuality
SIO_000300: 5.83e-1

MQ
type: SiteQuality
SIO_000300: 5.949e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.86e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.98e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.09e0

GenotypeQuality
all individuals: 38996
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5288
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 454
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1517
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 819
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1682
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10700
num of homozygotes: 0

East Asian
type: Population
allele count: 26
allele frequency: 3.058103975535168e-3
allele num: 8502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61000
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6134
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9400
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14964
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.11e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.1e-2

QD
type: SiteQuality
SIO_000300: 8.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.1e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.21e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

DP
type: SiteQuality
SIO_000300: 1.438621e6

GenotypeQuality
all individuals: 1701
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38423
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 700
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4501
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 574
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6132
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10696
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14976
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9410
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61016
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.352387673488591e-4
allele num: 8502
num of homozygotes: 1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.44e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.331e0

FS
type: SiteQuality
SIO_000300: 1.074e0

VQSLOD
type: SiteQuality
SIO_000300: -1.732e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.34e-1

MQ
type: SiteQuality
SIO_000300: 5.861e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.350000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.439074e6

MQRankSum
type: SiteQuality
SIO_000300: 3.26e-1

QD
type: SiteQuality
SIO_000300: 2.679e1

GenotypeQuality
all individuals: 543
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 605
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 742
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 463
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1103
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 561
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61216
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.175364362952515e-4
allele num: 8508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6146
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9432
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10724
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15006
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.16e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.159e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.066e0

DP
type: SiteQuality
SIO_000300: 1.44184e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.0e0

FS
type: SiteQuality
SIO_000300: 2.017e0

QD
type: SiteQuality
SIO_000300: 8.75e0

MQRankSum
type: SiteQuality
SIO_000300: -3.55e-1

GenotypeQuality
all individuals: 3004
bin: 6.75e1
variant carriers: 156

GenotypeQuality
all individuals: 81
bin: 7.5e0
variant carriers: 34

GenotypeQuality
all individuals: 422
bin: 2.75e1
variant carriers: 64

GenotypeQuality
all individuals: 336
bin: 5.75e1
variant carriers: 89

GenotypeQuality
all individuals: 18857
bin: 9.75e1
variant carriers: 17685

GenotypeQuality
all individuals: 29176
bin: 6.25e1
variant carriers: 152

East Asian
type: Population
allele count: 458
allele frequency: 5.369284876905041e-2
allele num: 8530
num of homozygotes: 12

Other
type: Population
allele count: 182
allele frequency: 2.116279069767442e-1
allele num: 860
num of homozygotes: 18

European (Non-Finnish)
type: Population
allele count: 11933
allele frequency: 1.883662194159432e-1
allele num: 63350
num of homozygotes: 1034

African
type: Population
allele count: 2488
allele frequency: 2.542407520948293e-1
allele num: 9786
num of homozygotes: 303

Latino
type: Population
allele count: 1513
allele frequency: 1.380726409928819e-1
allele num: 10958
num of homozygotes: 94

South Asian
type: Population
allele count: 3686
allele frequency: 2.359493022660351e-1
allele num: 15622
num of homozygotes: 463

European (Finnish)
type: Population
allele count: 1227
allele frequency: 1.942685243825206e-1
allele num: 6316
num of homozygotes: 105

FS
type: SiteQuality
SIO_000300: 5.3e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.97e-1

DP
type: SiteQuality
SIO_000300: 1.87321e6

MQRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.51e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.08e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.64e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.75e-2

QD
type: SiteQuality
SIO_000300: 1.404e1

MQ
type: SiteQuality
SIO_000300: 5.973e1

GenotypeQuality
all individuals: 931
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 457
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18857
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3004
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2914
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29176
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6316
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63350
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.021867974657674e-4
allele num: 9786
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10958
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.08e0

MQRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

MQ
type: SiteQuality
SIO_000300: 5.973e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.64e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.75e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.51e-1

DP
type: SiteQuality
SIO_000300: 1.87321e6

FS
type: SiteQuality
SIO_000300: 5.3e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.97e-1

QD
type: SiteQuality
SIO_000300: 1.404e1

GenotypeQuality
all individuals: 1285
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2416
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 55
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37805
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10726
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61124
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6082
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.055297593921486e-4
allele num: 9476
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15074
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.931e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.15e-1

FS
type: SiteQuality
SIO_000300: 3.901e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.076e0

DP
type: SiteQuality
SIO_000300: 1.473882e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.03e-1

QD
type: SiteQuality
SIO_000300: 1.356e1

MQRankSum
type: SiteQuality
SIO_000300: 9.77e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.89e-1

GenotypeQuality
all individuals: 47
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4670
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2412
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 911
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1277
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10712
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15062
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9460
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.640904466541958e-5
allele num: 60942
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6058
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.901e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -4.88e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.03e-1

QD
type: SiteQuality
SIO_000300: 1.964e1

FS
type: SiteQuality
SIO_000300: 1.237e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.86e-1

DP
type: SiteQuality
SIO_000300: 1.469272e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

GenotypeQuality
all individuals: 1198
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4592
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 341
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1263
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 635
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35646
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15000
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.659090154959021e-5
allele num: 60274
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5974
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8456
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

FS
type: SiteQuality
SIO_000300: 1.8469e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.55e-1

QD
type: SiteQuality
SIO_000300: 1.563e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.132e0

MQRankSum
type: SiteQuality
SIO_000300: -5.37e-1

DP
type: SiteQuality
SIO_000300: 1.456226e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.669e0

GenotypeQuality
all individuals: 32035
bin: 6.25e1
variant carriers: 46

GenotypeQuality
all individuals: 154
bin: 7.5e0
variant carriers: 17

GenotypeQuality
all individuals: 909
bin: 7.25e1
variant carriers: 45

GenotypeQuality
all individuals: 701
bin: 5.25e1
variant carriers: 37

GenotypeQuality
all individuals: 193
bin: 8.75e1
variant carriers: 43

GenotypeQuality
all individuals: 649
bin: 3.75e1
variant carriers: 21

East Asian
type: Population
allele count: 5
allele frequency: 5.915759583530525e-4
allele num: 8452
num of homozygotes: 0

Latino
type: Population
allele count: 359
allele frequency: 3.36836179395759e-2
allele num: 10658
num of homozygotes: 9

Other
type: Population
allele count: 87
allele frequency: 1.048192771084337e-1
allele num: 830
num of homozygotes: 4

South Asian
type: Population
allele count: 2117
allele frequency: 1.395885533430041e-1
allele num: 15166
num of homozygotes: 157

African
type: Population
allele count: 182
allele frequency: 1.937819420783646e-2
allele num: 9392
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 7120
allele frequency: 1.175072616847109e-1
allele num: 60592
num of homozygotes: 372

European (Finnish)
type: Population
allele count: 573
allele frequency: 9.588353413654618e-2
allele num: 5976
num of homozygotes: 21

DP
type: SiteQuality
SIO_000300: 1.637313e6

QD
type: SiteQuality
SIO_000300: 1.314e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.13e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.72e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-2

FS
type: SiteQuality
SIO_000300: 5.22e-1

MQ
type: SiteQuality
SIO_000300: 5.971e1

MQRankSum
type: SiteQuality
SIO_000300: 8.400000000000001e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.23e-1

GenotypeQuality
all individuals: 1509
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1021
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11922
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.194457716196847e-4
allele num: 8372
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5582
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9206
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56690
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10304
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 776
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.34395e6

VQSLOD
type: SiteQuality
SIO_000300: -7.492e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.45e0

MQRankSum
type: SiteQuality
SIO_000300: 2.55e-1

QD
type: SiteQuality
SIO_000300: 7.2e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.066e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

GenotypeQuality
all individuals: 1510
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 835
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4162
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 370
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32806
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8342
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5518
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.270111183780249e-4
allele num: 9174
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56184
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10256
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14436
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 774
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.284e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.649e0

MQRankSum
type: SiteQuality
SIO_000300: 9.6e-2

MQ
type: SiteQuality
SIO_000300: 5.911e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e-1

FS
type: SiteQuality
SIO_000300: 6.241e0

QD
type: SiteQuality
SIO_000300: 2.962e1

DP
type: SiteQuality
SIO_000300: 1.332442e6

GenotypeQuality
all individuals: 201
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 628
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 784
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 352
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 483
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8258
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 16
allele frequency: 2.952356349411374e-4
allele num: 54194
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14252
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.978048293753742e-5
allele num: 10022
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.1059500110595e-4
allele num: 9042
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 752
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5322
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.64e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.041e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.4e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.44e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.04e-1

QD
type: SiteQuality
SIO_000300: 1.049e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.23e0

DP
type: SiteQuality
SIO_000300: 1.287078e6

GenotypeQuality
all individuals: 1506
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 405
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14739
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1459
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1698
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14238
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8246
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5310
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.211900022119e-4
allele num: 9042
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54102
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10024
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 752
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

QD
type: SiteQuality
SIO_000300: 8.960000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.41e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.287112e6

FS
type: SiteQuality
SIO_000300: 2.72e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.62e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

GenotypeQuality
all individuals: 1600
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1503
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1829
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2302
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 601
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5188
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8968
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8194
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9916
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.77814719661478e-5
allele num: 52936
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 738
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14136
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.93e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.2e-2

DP
type: SiteQuality
SIO_000300: 1.261322e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.714e0

MQRankSum
type: SiteQuality
SIO_000300: -9.62e-1

FS
type: SiteQuality
SIO_000300: 8.731e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.342e0

QD
type: SiteQuality
SIO_000300: 7.55e0

GenotypeQuality
all individuals: 660
bin: 7.75e1
variant carriers: 15

GenotypeQuality
all individuals: 3016
bin: 6.75e1
variant carriers: 4

GenotypeQuality
all individuals: 176
bin: 9.25e1
variant carriers: 8

GenotypeQuality
all individuals: 2093
bin: 3.75e1
variant carriers: 3

GenotypeQuality
all individuals: 808
bin: 4.25e1
variant carriers: 3

European (Non-Finnish)
type: Population
allele count: 16
allele frequency: 3.271047143966963e-4
allele num: 48914
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 5.099067599067599e-4
allele num: 13728
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.8328611898017e-3
allele num: 706
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4768
num of homozygotes: 0

Latino
type: Population
allele count: 41
allele frequency: 4.36541737649063e-3
allele num: 9392
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.765060240963856e-4
allele num: 7968
num of homozygotes: 0

African
type: Population
allele count: 945
allele frequency: 1.08695652173913e-1
allele num: 8694
num of homozygotes: 39

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.81e-1

QD
type: SiteQuality
SIO_000300: 1.375e1

DP
type: SiteQuality
SIO_000300: 1.186324e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.000000000000001e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.72e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.14e0

MQRankSum
type: SiteQuality
SIO_000300: 1.22e-1

FS
type: SiteQuality
SIO_000300: 6.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.161e0

GenotypeQuality
all individuals: 304
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2866
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 650
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19110
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2902
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.217294900221729e-4
allele num: 13530
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 678
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4538
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9134
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47086
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8296
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7798
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.909e1

DP
type: SiteQuality
SIO_000300: 1.127022e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.35e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.41e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.675e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.752e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

FS
type: SiteQuality
SIO_000300: 4.861e0

MQRankSum
type: SiteQuality
SIO_000300: 1.17e0

GenotypeQuality
all individuals: 302
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 628
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2568
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 947
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1360
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4328
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 656
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8830
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7694
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13276
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8064
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.221333688746724e-5
allele num: 45018
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.62e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.4e-1

FS
type: SiteQuality
SIO_000300: 8.156000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.94e-1

MQ
type: SiteQuality
SIO_000300: 5.931e1

DP
type: SiteQuality
SIO_000300: 1.091542e6

VQSLOD
type: SiteQuality
SIO_000300: -9.537e-1

QD
type: SiteQuality
SIO_000300: 8.640000000000001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.04e0

GenotypeQuality
all individuals: 15424
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2520
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1375
bin: 9.75e1
variant carriers: 18

GenotypeQuality
all individuals: 137
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 619
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 15
allele frequency: 3.476084538375973e-4
allele num: 43152
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7540
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.264542235710673e-4
allele num: 7908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13084
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4102
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 638
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.463e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.93e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.26e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.065028e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.16e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 7.1e-1

GenotypeQuality
all individuals: 2103
bin: 6.75e1
variant carriers: 143

GenotypeQuality
all individuals: 456
bin: 5.75e1
variant carriers: 124

GenotypeQuality
all individuals: 277
bin: 8.25e1
variant carriers: 121

GenotypeQuality
all individuals: 571
bin: 7.25e1
variant carriers: 84

GenotypeQuality
all individuals: 533
bin: 4.75e1
variant carriers: 155

South Asian
type: Population
allele count: 2363
allele frequency: 1.803266178266178e-1
allele num: 13104
num of homozygotes: 197

African
type: Population
allele count: 1570
allele frequency: 2.001529831718511e-1
allele num: 7844
num of homozygotes: 128

Other
type: Population
allele count: 71
allele frequency: 1.134185303514377e-1
allele num: 626
num of homozygotes: 2

Latino
type: Population
allele count: 3078
allele frequency: 3.733624454148471e-1
allele num: 8244
num of homozygotes: 469

European (Non-Finnish)
type: Population
allele count: 1191
allele frequency: 2.813075723935944e-2
allele num: 42338
num of homozygotes: 11

East Asian
type: Population
allele count: 3007
allele frequency: 4.091156462585034e-1
allele num: 7350
num of homozygotes: 540

European (Finnish)
type: Population
allele count: 206
allele frequency: 5.10406342913776e-2
allele num: 4036
num of homozygotes: 3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.367e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.89e0

QD
type: SiteQuality
SIO_000300: 1.653e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.59e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.9e-2

DP
type: SiteQuality
SIO_000300: 1.135534e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.32e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.35e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 400
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1961
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32059
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12520
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.710320901994796e-5
allele num: 36896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3430
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6678
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5552
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 534
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11688
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.05e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 8.67156e5

MQRankSum
type: SiteQuality
SIO_000300: 2.18e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.637e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.87e-1

QD
type: SiteQuality
SIO_000300: 4.97e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.66e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.828e0

GenotypeQuality
all individuals: 2189
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 523
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 911
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.724350242467171e-5
allele num: 36706
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3400
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5514
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 532
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11676
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.08e-2

MQRankSum
type: SiteQuality
SIO_000300: 6.3e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.65795e5

QD
type: SiteQuality
SIO_000300: 1.053e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.78e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.72e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.41e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 521
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32930
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12872
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2178
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5498
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11620
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3388
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 520
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 3.037667071688943e-4
allele num: 6584
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5442
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36280
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 8.58428e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.78e-1

FS
type: SiteQuality
SIO_000300: 9.734e0

QD
type: SiteQuality
SIO_000300: 9.4e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.5e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.595e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-2

MQ
type: SiteQuality
SIO_000300: 5.609e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.228e0

GenotypeQuality
all individuals: 645
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 495
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2002
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.095975232198142e-5
allele num: 32300
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11112
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 480
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4812
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2928
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4686
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6120
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.149e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.9e-2

QD
type: SiteQuality
SIO_000300: 7.84e0

DP
type: SiteQuality
SIO_000300: 7.98291e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.61e-2

MQRankSum
type: SiteQuality
SIO_000300: -4.64e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.885e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.9e-1

GenotypeQuality
all individuals: 1958
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 114
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9762
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 9.75e1
variant carriers: 9

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4288
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 2.650059626341592e-4
allele num: 30188
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5814
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4450
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2718
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10856
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 460
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.71e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.86e-1

QD
type: SiteQuality
SIO_000300: 1.562e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.87e-1

DP
type: SiteQuality
SIO_000300: 7.66328e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.89e-2

MQ
type: SiteQuality
SIO_000300: 6.098e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.76e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.96e0

GenotypeQuality
all individuals: 70
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 80
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GenotypeQuality
all individuals: 458
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 418
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3278
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2232
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 25318
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10268
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3802
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 7.593014426727411e-4
allele num: 5268
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.01409e5

MQRankSum
type: SiteQuality
SIO_000300: -3.12e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.61e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.808e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.04e-1

QD
type: SiteQuality
SIO_000300: 1.278e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.07e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 451
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8138
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.291845493562232e-5
allele num: 23300
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1988
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2878
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10028
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5016
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 400
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3498
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.02e-2

FS
type: SiteQuality
SIO_000300: 3.625e0

DP
type: SiteQuality
SIO_000300: 6.74296e5

MQ
type: SiteQuality
SIO_000300: 5.936e1

QD
type: SiteQuality
SIO_000300: 1.162e1

MQRankSum
type: SiteQuality
SIO_000300: 1.09e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.3e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.483e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.93e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.1e0

GenotypeQuality
all individuals: 104
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8091
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 23022
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9960
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5004
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2800
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1980
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.69177e5

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.22e-1

QD
type: SiteQuality
SIO_000300: 1.141e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.5e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.36e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -3.683e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-2

GenotypeQuality
all individuals: 6246
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 237
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variant carriers: 1

GenotypeQuality
all individuals: 65
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variant carriers: 0

GenotypeQuality
all individuals: 84
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variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1286
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 528
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8076
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3472
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 250
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12158
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.321e0

MQRankSum
type: SiteQuality
SIO_000300: -5.92e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.86e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.92e0

QD
type: SiteQuality
SIO_000300: 1.196e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

DP
type: SiteQuality
SIO_000300: 4.80136e5

GenotypeQuality
all individuals: 406
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 195
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GenotypeQuality
all individuals: 58
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.0530749789385e-4
allele num: 9496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 220
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2960
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7106
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 214
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 9.19e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.77e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 3.91963e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.537e0

MQRankSum
type: SiteQuality
SIO_000300: 6.7e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.39e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

GenotypeQuality
all individuals: 134
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 703
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 170
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
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variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 9.75e1
variant carriers: 9

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 112
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 424
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 8.618566855454322e-4
allele num: 8122
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 3.70919881305638e-4
allele num: 2696
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6286
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.16e-1

DP
type: SiteQuality
SIO_000300: 3.33587e5

QD
type: SiteQuality
SIO_000300: 1.38e1

VQSLOD
type: SiteQuality
SIO_000300: 1.62e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.63e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.06e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.08e-1

GenotypeQuality
all individuals: 169
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
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GenotypeQuality
all individuals: 163
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GenotypeQuality
all individuals: 100
bin: 8.25e1
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GenotypeQuality
all individuals: 229
bin: 9.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 408
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2682
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 176
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6156
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7968
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 102
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 600
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.18e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.685e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.36e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.36e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.213e0

DP
type: SiteQuality
SIO_000300: 3.23121e5

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
all individuals: 62
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GenotypeQuality
all individuals: 85
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 4.187604690117253e-4
allele num: 2388
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 318
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 148
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6444
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 484
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4440
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.189e0

VQSLOD
type: SiteQuality
SIO_000300: -1.465e0

DP
type: SiteQuality
SIO_000300: 2.41977e5

FS
type: SiteQuality
SIO_000300: 5.642e0

QD
type: SiteQuality
SIO_000300: 1.516e1

MQRankSum
type: SiteQuality
SIO_000300: 1.21e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.262e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.67e-2

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 8.75e1
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GenotypeQuality
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GenotypeQuality
all individuals: 6723
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 314
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 148
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.066115702479339e-3
allele num: 484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6436
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 34
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4390
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.40743e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.46e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.59e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.51e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.46e-1

QD
type: SiteQuality
SIO_000300: 1.04e1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
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GenotypeQuality
all individuals: 669
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2108
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 110
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 416
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2694
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5202
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 286
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.258e1

BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -2.1e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.94e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.517e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.94589e5

GenotypeQuality
all individuals: 99
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.25e1
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GenotypeQuality
all individuals: 22
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GenotypeQuality
all individuals: 382
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 569
bin: 3.25e1
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European (Non-Finnish)
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East Asian
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Latino
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African
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South Asian
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Other
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European (Finnish)
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MQRankSum
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MQ
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ClippingRankSum
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FS
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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African
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Latino
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European (Finnish)
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European (Non-Finnish)
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MQ
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QD
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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FS
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MQRankSum
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DP
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ClippingRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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European (Non-Finnish)
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Latino
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South Asian
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Other
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VQSLOD
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FS
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MQRankSum
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ClippingRankSum
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DP
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BaseQRankSum
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InbreedingCoeff
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QD
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ReadPosRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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Latino
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European (Finnish)
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African
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South Asian
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European (Non-Finnish)
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VQSLOD
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DP
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InbreedingCoeff
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MQ
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FS
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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European (Finnish)
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East Asian
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Latino
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Other
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European (Non-Finnish)
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VQSLOD
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MQRankSum
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ClippingRankSum
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MQ
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InbreedingCoeff
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FS
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QD
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BaseQRankSum
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DP
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GenotypeQuality
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European (Finnish)
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Latino
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Other
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African
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East Asian
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European (Non-Finnish)
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South Asian
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BaseQRankSum
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DP
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ReadPosRankSum
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FS
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MQ
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ClippingRankSum
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MQRankSum
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QD
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InbreedingCoeff
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VQSLOD
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GenotypeQuality
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East Asian
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African
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South Asian
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European (Non-Finnish)
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European (Finnish)
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Latino
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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QD
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DP
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InbreedingCoeff
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MQ
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VQSLOD
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ClippingRankSum
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FS
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GenotypeQuality
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Other
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East Asian
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South Asian
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European (Non-Finnish)
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Latino
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African
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European (Finnish)
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ClippingRankSum
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MQ
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QD
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BaseQRankSum
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VQSLOD
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MQRankSum
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ReadPosRankSum
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FS
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InbreedingCoeff
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DP
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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European (Finnish)
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Latino
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South Asian
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African
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Other
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InbreedingCoeff
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MQ
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MQRankSum
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ReadPosRankSum
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FS
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VQSLOD
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QD
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BaseQRankSum
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DP
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GenotypeQuality
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European (Finnish)
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Latino
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East Asian
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African
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South Asian
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European (Non-Finnish)
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QD
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VQSLOD
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ReadPosRankSum
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MQ
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FS
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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DP
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GenotypeQuality
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African
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East Asian
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South Asian
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European (Non-Finnish)
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Latino
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European (Finnish)
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DP
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ClippingRankSum
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InbreedingCoeff
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MQ
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FS
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VQSLOD
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BaseQRankSum
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QD
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MQRankSum
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GenotypeQuality
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South Asian
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Latino
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East Asian
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European (Non-Finnish)
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African
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European (Finnish)
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DP
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MQRankSum
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VQSLOD
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ReadPosRankSum
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QD
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BaseQRankSum
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InbreedingCoeff
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MQ
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FS
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